Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0006884

Physical Location & Seq

Genomic Coordinates Forward (+)

58382265 .. 58386983

Gene Structure 4719 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG352900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGTGGGGAGGAGGAGGAGGAAGCCACTGGTACTCACTTCCACCAAAACTCTCATCAAATCCGTACTGACTTCGCCGCCGGGAGAACTCACTTCCGACGACGATCACCGACTCTCCGCCGTCGCCGCTGATGACGTGTCTACTAGTTTGCAGCTGCTGCCGCCGGGAATTCTCCGGTTCTCCATCGGTCGGAGCCCCAAATTGGCTTCTCTCGACGACTCTGCTCTCGTCGGCCTCTCCACTTCTCTCCTCAAACGCCTCTGCATCACCTCCGGCTCCCTGGTGCTTGTGAAGAATATGGAGACAAAAATAGAAAGAATTGCTCAGGCCATTGTTGTGGATCCTCCGGACCGCTCCGAGAACACTGGACTATCTGCTGCCCAATCTTCCCAGGCAATGCTTATTCTGCCTTGTTGCACTTTCCCTGAAAATGGCCACATGTTGTTAGACCGGGAAGTTGCCTATATATCACCTCTGTTGGCATTTAACATTGACTTGCATACATTGTGCTTGAAATCGCTTGTCCATAGAGGGGAAGCGGTGTTGGCATCTTATTTCGGGGATAGAGTGGACGAAGAGGTGAGTGGGAAAGGCGTCGGGGCTTCTGTGATTGGAATACAACCTCAGTCGGAGTTGCCAAGATATGCTTCGCACTTGAGGGCTTCCTTTGTGAGGATACCAGAATGTGGTAGTCTTGACTCTCTTAGAGGAAATTCGGCTGTTGAACATGAAGATCGTCAAGAAATGATAGATTTGGCACTACATAGCTACTTTGAAGTTGATAGGTATCTAGCAAGAGGTGATGTTTTCAGTATTTGTATAAAATGGAATTGCAAGTCAACGATTTGCGTTCCTTGCAACCAAAGTTTGGAAAATGGGGTTGATAACACTATCTATTTCAAGGTTGTGGCTATGGAACCTTTGGACGAACCAATTCTCCGAGTTAACCGTTCTCAAACTGCCCTTGTGCTTGGAGGAAGTGTCTCTTCTGCTGTGCCCCCTGATTTATTGATTTCTGGACAAAAAGGTTTCACACCCTTGCAAGGGGACACAGTGAAAATATTGGCCTCCATACTTACACCTCTTCTGTGCCCCTCAGCACTATCTTCAAAATTCAGAGTTTCTGTTCTGTTGTATGGATTGGCAGGATGTGGGAAGAGAACAGTTGTTAGATACATTGCTCGTCGATTGGGCCTGCATGTAGTTGAATATAGCTGTCATAATCTGACGATGTCATCTGAAAAAAAGATGTCTGTTGCACTAGCCCAAACCTTGAATGCAGCTCAAAGATACTCGCCAACTATACTTCTTCTCCGCCATTTTGATGTTTTCCGGAATTTGCACGAAGGTTCACCAAATGATCAAGTTGGCATCACTTCTGAAGTTGCATCACTTATAAGGGAATTCACTGAGCCAATCTCTGATTATGGAGACATTGATTCTGAACAAAAACAAAATGGTCATGTTGATTCTGGGAAGATAGGTAGGCATCAAGTGCTGTTCATTGCAGCTGCTGACAGTTCAGAAGGTCTACCGCCAACTATTAGACGTTGCTTTAGCCATGAAATAAGTATGGGTCCTTTGACTGAAGAACAAAGGGTTAGAATGGTCTCACAGTCTTTGCAGAAGGCTTCTGAATTCCTTTCTAATACTAATTCGGAGGATCTTATAAAGGATATAGTTGCGCAGACATCTGGTTTCATGCCTAGAGATATATGTGCATTGGTAGCTGATGCTGGTGCAAACTTGATTCCCAAAGGCAATGCTCAGATTGATACAGTGAAGTCTGAAGAATCAGATGCTTCTCTCACAAATAATGTTGAATCAGACAGTAAGTCCTCTGAAGTTGCATCTCCGATTCTGGGGAAAGAAAGCTTGACAAAAGCATTGGAAAGATCAAAGAAAAGGAATGCATCAGCCCTCGGTACTCCAAAGGTTCCTGATGTGAAATGGGAAGATGTTGGTGGTCTTGAGGATGTGAAGAAATCAATCCTGGATACTGTTCAGTTACCTCTTCTGCACAAGGACTTGTTTTCATCTGGCTTACGAAAGCGTTCTGGTGTTCTTCTGTATGGTCCTCCTGGAACAGGGAAAGCCAGATCAGCACGCCCATGTGTTATATTTTTTGATGAACTTGATTCTCTTGCTCCAGCCCGAGGTGCATCGGGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGATGGCCTAAATGATTCGAGTCAGGTGTTTTGCTCCGTCTTTTTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006082 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0015031 GO:0015833 GO:0015919 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0017038 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0042886 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0065002 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

AAA

Protein Analysis

756

Amino Acids

81.79

Weight (kDa)

6.16

Isoelectric Point (pI)

46.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	376 - 525	4.5e-13	ATPase family associated with various cellular activities (AAA)
AAA	PF00004	699 - 749	5.6e-08	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03000
fragaria_vesca	FvH4_2g25060 FvH4_2g25060 FvH4_2g25060 FvH4_2g25060 FvH4_2g25060 FvH4_2g25060 FvH4_2g25060
malus_domestica	MD11G1301700.v1.1
prunus_persica	Prupe.8G255300_v2.0.a1 Prupe.8G255300_v2.0.a1 Prupe.8G255300_v2.0.a1
pyrus_communis	pycom11g26430
rosa_chinensis	RchiOBHm_Chr6g0293081
rosa_laevigata	RLG00000011973
rosa_multiflora	Rmu_co8222790.1_g000001 Rmu_sc0003615.1_g000004 Rmu_sc0033483.1_g000001
rosa_roxburghii	Rroxscaffold_7G00174440
rosa_rugosa	Rorug06G0232600.1 Rorug06G0232700
rosa_samantha	Rh6AG345400 Rh6BG352900 Rh6CG359400 Rh6DG345400
rosa_wichuraiana	Rw6G030100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1397, 1670
Acc16I	TGCGCA	1 cut(s)	1686
AccB7I	CCANNNNNTGG	2 cut(s)	686, 868
AccBSI	CCGCTC	1 cut(s)	354
AccI	GTMKAC	2 cut(s)	140, 1531
AccIII	TCCGGA	2 cut(s)	346, 1332
AciI	CCGC	8 cut(s)	77, 117, 126, 161, 352, 539, 1315, 1535
AclWI	GGATC	3 cut(s)	335, 348, 1671
AcoI	YGGCCR	1 cut(s)	433
AcsI	RAATTY	6 cut(s)	168, 712, 1112, 1336, 1403, 1637
AcuI	CTGAAG	4 cut(s)	1401, 1608, 1809, 1863
AcyI	GRCGYC	1 cut(s)	594
AfaI	GTAC	3 cut(s)	33, 66, 1927
AflIII	ACRYGT	2 cut(s)	135, 438
AgsI	TTSAA	8 cut(s)	514, 725, 776, 901, 1110, 1208, 1276, 1823
AhdI	GACNNNNNGTC	1 cut(s)	1834
AhlI	ACTAGT	1 cut(s)	143
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	4 cut(s)	279, 390, 1992, 2080
AjuI	GAANNNNNNNTTGG	2 cut(s)	631, 663
AloI	GAACNNNNNNTCC	2 cut(s)	921, 953
AluBI	AGCT	7 cut(s)	154, 768, 1215, 1283, 1511, 1730, 1875
AluI	AGCT	7 cut(s)	154, 768, 1215, 1283, 1511, 1730, 1875
Alw26I	GTCTC	4 cut(s)	296, 988, 1425, 1615
AlwI	GGATC	3 cut(s)	335, 348, 1671
AlwNI	CAGNNNCTG	2 cut(s)	157, 1514
Ama87I	CYCGRG	1 cut(s)	2154
Aor13HI	TCCGGA	2 cut(s)	346, 1332
AoxI	GGCC	6 cut(s)	232, 327, 433, 1065, 1192, 2224
ApeKI	GCWGC	7 cut(s)	151, 154, 157, 377, 1280, 1508, 1511
ApoI	RAATTY	6 cut(s)	168, 712, 1112, 1336, 1403, 1637
Asp700I	GAANNNNTTC	2 cut(s)	933, 2053
AspLEI	GCGC	1 cut(s)	1687
AspS9I	GGNCC	4 cut(s)	349, 1192, 1577, 2075
AsuC2I	CCSGG	3 cut(s)	81, 165, 452
AsuHPI	GGTGA	6 cut(s)	98, 259, 462, 592, 812, 1344
AvaI	CYCGRG	1 cut(s)	2154
AvaII	GGWCC	3 cut(s)	349, 1577, 2075
BaeGI	GKGCMC	2 cut(s)	999, 1094
BalI	TGGCCA	1 cut(s)	435
BamHI	GGATCC	1 cut(s)	340
BanII	GRGCYC	1 cut(s)	197
BbvCI	CCTCAGC	1 cut(s)	1096
BbvI	GCAGC	7 cut(s)	141, 144, 163, 364, 1292, 1498, 1520
BccI	CCATC	2 cut(s)	191, 2216
BceAI	ACGGC	1 cut(s)	104
BcgI	CGANNNNNNTGC	2 cut(s)	203, 237
BciT130I	CCWGG	4 cut(s)	281, 392, 1994, 2082
BciVI	GTATCC	2 cut(s)	669, 1990
BclI	TGATCA	1 cut(s)	1360
BcnI	CCSGG	3 cut(s)	81, 165, 452
BcoDI	GTCTC	4 cut(s)	296, 988, 1425, 1615
BcuI	ACTAGT	1 cut(s)	143
BfaI	CTAG	4 cut(s)	144, 791, 1262, 1707
BfuI	GTATCC	2 cut(s)	669, 1990
Bme1390I	CCNGG	7 cut(s)	81, 165, 281, 392, 452, 1994, 2082
Bme18I	GGWCC	3 cut(s)	349, 1577, 2075
BmeRI	GACNNNNNGTC	1 cut(s)	1834
BmeT110I	CYCGRG	1 cut(s)	2154
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	4 cut(s)	349, 1192, 1577, 2075
BmiI	GGNNCC	6 cut(s)	194, 277, 342, 918, 1578, 1938
BmrFI	CCNGG	7 cut(s)	81, 165, 281, 392, 452, 1994, 2082
BplI	GAGNNNNNCTC	2 cut(s)	1403, 1435
BpmI	CTGGAG	1 cut(s)	2133
Bpu10I	CCTNAGC	2 cut(s)	324, 1096
BpuEI	CTTGAG	2 cut(s)	676, 1991
BpuMI	CCSGG	3 cut(s)	81, 165, 452
BsaBI	GATNNNNATC	1 cut(s)	786
BsaHI	GRCGYC	1 cut(s)	594
BsaI	GGTCTC	1 cut(s)	1615
BsaJI	CCNNGG	4 cut(s)	279, 390, 1921, 2155
BsaWI	WCCGGW	3 cut(s)	174, 346, 1332
BsaXI	ACNNNNNCTCC	8 cut(s)	98, 128, 921, 951, 966, 996, 1296, 1326
Bse1I	ACTGG	2 cut(s)	33, 370
Bse3DI	GCAATG	4 cut(s)	402, 1176, 1503, 1768
Bse8I	GATNNNNATC	1 cut(s)	786
BseAI	TCCGGA	2 cut(s)	346, 1332
BseBI	CCWGG	4 cut(s)	281, 392, 1994, 2082
BseDI	CCNNGG	4 cut(s)	279, 390, 1921, 2155
BseGI	GGATG	2 cut(s)	1154, 1981
BseJI	GATNNNNATC	1 cut(s)	786
BseMI	GCAATG	4 cut(s)	402, 1176, 1503, 1768
BseMII	CTCAG	6 cut(s)	338, 638, 1110, 1401, 1781, 2216
BseNI	ACTGG	2 cut(s)	33, 370
BseRI	GAGGAG	4 cut(s)	25, 28, 31, 239
BseSI	GKGCMC	2 cut(s)	999, 1094
BseXI	GCAGC	7 cut(s)	141, 144, 163, 364, 1292, 1498, 1520
BsgI	GTGCAG	1 cut(s)	2003
Bsh1285I	CGRYCG	1 cut(s)	190
BshFI	GGCC	6 cut(s)	234, 329, 435, 1067, 1194, 2226
BsiEI	CGRYCG	1 cut(s)	190
BsiHKCI	CYCGRG	1 cut(s)	2154
BsiSI	CCGG	7 cut(s)	80, 164, 175, 273, 347, 451, 1333
BslFI	GGGAC	1 cut(s)	1061
BsmAI	GTCTC	4 cut(s)	296, 988, 1425, 1615
BsmFI	GGGAC	1 cut(s)	1061
BsmI	GAATGC	2 cut(s)	1282, 1915
BsnI	GGCC	6 cut(s)	234, 329, 435, 1067, 1194, 2226
Bso31I	GGTCTC	1 cut(s)	1615
BsoBI	CYCGRG	1 cut(s)	2154
Bsp1286I	GDGCHC	3 cut(s)	197, 999, 1094
Bsp13I	TCCGGA	2 cut(s)	346, 1332
Bsp143I	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
BspACI	CCGC	8 cut(s)	77, 117, 126, 161, 352, 539, 1315, 1535
BspANI	GGCC	6 cut(s)	234, 329, 435, 1067, 1194, 2226
BspCNI	CTCAG	6 cut(s)	337, 637, 1109, 1402, 1780, 2215
BspEI	TCCGGA	2 cut(s)	346, 1332
BspLI	GGNNCC	6 cut(s)	194, 277, 342, 918, 1578, 1938
BspPI	GGATC	3 cut(s)	335, 348, 1671
BspTNI	GGTCTC	1 cut(s)	1615
BsrBI	CCGCTC	1 cut(s)	354
BsrDI	GCAATG	4 cut(s)	402, 1176, 1503, 1768
BsrI	ACTGG	2 cut(s)	33, 370
BssECI	CCNNGG	4 cut(s)	279, 390, 1921, 2155
BssMI	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
BssNI	GRCGYC	1 cut(s)	594
Bst2UI	CCWGG	4 cut(s)	281, 392, 1994, 2082
Bst4CI	ACNGT	8 cut(s)	950, 1054, 1165, 1520, 1617, 1780, 1832, 2002
Bst6I	CTCTTC	5 cut(s)	570, 991, 1089, 1151, 2019
BstACI	GRCGYC	1 cut(s)	594
BstAPI	GCANNNNNTGC	2 cut(s)	157, 1495
BstC8I	GCNNGC	3 cut(s)	1196, 2107, 2211
BstDEI	CTNAG	7 cut(s)	324, 624, 704, 1096, 1410, 1767, 2202
BstENI	CCTNNNNNAGG	2 cut(s)	670, 2085
BstF5I	GGATG	2 cut(s)	1154, 1981
BstHHI	GCGC	1 cut(s)	1687
BstKTI	GATC	7 cut(s)	106, 343, 736, 1363, 1666, 1898, 2102
BstMAI	GTCTC	4 cut(s)	296, 988, 1425, 1615
BstMBI	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
BstMCI	CGRYCG	1 cut(s)	190
BstNI	CCWGG	4 cut(s)	281, 392, 1994, 2082
BstNSI	RCATGY	2 cut(s)	442, 1202
BstSCI	CCNGG	7 cut(s)	79, 163, 279, 390, 450, 1992, 2080
BstSLI	GKGCMC	2 cut(s)	999, 1094
BstV1I	GCAGC	7 cut(s)	141, 144, 163, 364, 1292, 1498, 1520
BstX2I	RGATCY	2 cut(s)	340, 1663
BstXI	CCANNNNNNTGG	1 cut(s)	337
BstYI	RGATCY	2 cut(s)	340, 1663
BsuI	GTATCC	2 cut(s)	669, 1990
BsuRI	GGCC	6 cut(s)	234, 329, 435, 1067, 1194, 2226
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	2 cut(s)	1154, 1981
BtsIMutI	CAGTG	5 cut(s)	26, 363, 1059, 1407, 1785
Cac8I	GCNNGC	3 cut(s)	1196, 2107, 2211
CaiI	CAGNNNCTG	2 cut(s)	157, 1514
CfoI	GCGC	1 cut(s)	1687
Cfr13I	GGNCC	4 cut(s)	349, 1192, 1577, 2075
CpoI	CGGWCCG	1 cut(s)	349
CseI	GACGC	1 cut(s)	583
Csp6I	GTAC	3 cut(s)	32, 65, 1926
CspI	CGGWCCG	1 cut(s)	349
CviAII	CATG	7 cut(s)	439, 728, 1199, 1463, 1562, 1702, 2112
CviQI	GTAC	3 cut(s)	32, 65, 1926
DdeI	CTNAG	7 cut(s)	324, 624, 704, 1096, 1410, 1767, 2202
DpnI	GATC	7 cut(s)	105, 342, 735, 1362, 1665, 1897, 2101
DpnII	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
DriI	GACNNNNNGTC	1 cut(s)	1834
EaeI	YGGCCR	1 cut(s)	433
Eam1104I	CTCTTC	5 cut(s)	570, 991, 1089, 1151, 2019
Eam1105I	GACNNNNNGTC	1 cut(s)	1834
EarI	CTCTTC	5 cut(s)	570, 991, 1089, 1151, 2019
EciI	GGCGGA	2 cut(s)	106, 1304
Eco24I	GRGCYC	1 cut(s)	197
Eco31I	GGTCTC	1 cut(s)	1615
Eco47I	GGWCC	3 cut(s)	349, 1577, 2075
Eco57I	CTGAAG	4 cut(s)	1401, 1608, 1809, 1863
Eco88I	CYCGRG	1 cut(s)	2154
EcoNI	CCTNNNNNAGG	2 cut(s)	670, 2085
EcoO109I	RGGNCCY	1 cut(s)	1577
EcoRI	GAATTC	3 cut(s)	168, 1403, 1637
EcoRII	CCWGG	4 cut(s)	279, 390, 1992, 2080
EcoT22I	ATGCAT	1 cut(s)	1915
EcoT38I	GRGCYC	1 cut(s)	197
FaeI	CATG	7 cut(s)	442, 731, 1202, 1466, 1565, 1705, 2115
FalI	AAGNNNNNCTT	4 cut(s)	631, 663, 970, 1002
FaqI	GGGAC	1 cut(s)	1061
FatI	CATG	7 cut(s)	438, 727, 1198, 1462, 1561, 1701, 2111
FbaI	TGATCA	1 cut(s)	1360
FblI	GTMKAC	2 cut(s)	140, 1531
FokI	GGATG	2 cut(s)	1161, 1988
FriOI	GRGCYC	1 cut(s)	197
FspBI	CTAG	4 cut(s)	144, 791, 1262, 1707
FspI	TGCGCA	1 cut(s)	1686
GlaI	GCGC	1 cut(s)	1686
GsuI	CTGGAG	1 cut(s)	2133
HaeIII	GGCC	6 cut(s)	234, 329, 435, 1067, 1194, 2226
HapII	CCGG	7 cut(s)	80, 164, 175, 273, 347, 451, 1333
HgaI	GACGC	1 cut(s)	583
HhaI	GCGC	1 cut(s)	1687
Hin1I	GRCGYC	1 cut(s)	594
Hin1II	CATG	7 cut(s)	442, 731, 1202, 1466, 1565, 1705, 2115
Hin6I	GCGC	1 cut(s)	1685
HinP1I	GCGC	1 cut(s)	1685
HincII	GTYRAC	2 cut(s)	840, 946
HindII	GTYRAC	2 cut(s)	840, 946
HindIII	AAGCTT	1 cut(s)	1873
HpaI	GTTAAC	1 cut(s)	946
HpaII	CCGG	7 cut(s)	80, 164, 175, 273, 347, 451, 1333
HphI	GGTGA	6 cut(s)	98, 259, 462, 592, 812, 1344
Hpy166II	GTNNAC	6 cut(s)	141, 571, 840, 946, 1352, 1532
Hpy188III	TCNNGA	8 cut(s)	212, 347, 695, 740, 1017, 1333, 1940, 1970
Hpy8I	GTNNAC	6 cut(s)	141, 571, 840, 946, 1352, 1532
Hpy99I	CGWCG	7 cut(s)	101, 104, 125, 218, 233, 599, 1188
HpyAV	CCTTC	3 cut(s)	1340, 1520, 1621
HpyCH4III	ACNGT	8 cut(s)	950, 1054, 1165, 1520, 1617, 1780, 1832, 2002
HpyCH4IV	ACGT	2 cut(s)	135, 1549
HpyF3I	CTNAG	7 cut(s)	324, 624, 704, 1096, 1410, 1767, 2202
HpySE526I	ACGT	2 cut(s)	135, 1549
Hsp92I	GRCGYC	1 cut(s)	594
Hsp92II	CATG	7 cut(s)	442, 731, 1202, 1466, 1565, 1705, 2115
HspAI	GCGC	1 cut(s)	1685
Kpn2I	TCCGGA	2 cut(s)	346, 1332
Ksp22I	TGATCA	1 cut(s)	1360
KspAI	GTTAAC	1 cut(s)	946
Kzo9I	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
LmnI	GCTCC	5 cut(s)	192, 281, 359, 2152, 2258
Lsp1109I	GCAGC	7 cut(s)	141, 144, 163, 364, 1292, 1498, 1520
MaeI	CTAG	4 cut(s)	144, 791, 1262, 1707
MaeII	ACGT	2 cut(s)	135, 1549
MaeIII	GTNAC	1 cut(s)	2007
MalI	GATC	7 cut(s)	105, 342, 735, 1362, 1665, 1897, 2101
MbiI	CCGCTC	1 cut(s)	354
MboI	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
MflI	RGATCY	2 cut(s)	340, 1663
MhlI	GDGCHC	3 cut(s)	197, 999, 1094
MlsI	TGGCCA	1 cut(s)	435
MluNI	TGGCCA	1 cut(s)	435
MlyI	GAGTC	4 cut(s)	105, 212, 692, 2248
MmeI	TCCRAC	3 cut(s)	120, 170, 609
Mox20I	TGGCCA	1 cut(s)	435
Mph1103I	ATGCAT	1 cut(s)	1915
MroI	TCCGGA	2 cut(s)	346, 1332
MroXI	GAANNNNTTC	2 cut(s)	933, 2053
MscI	TGGCCA	1 cut(s)	435
MseI	TTAA	2 cut(s)	486, 945
MslI	CAYNNNNRTG	3 cut(s)	335, 1323, 2110
Msp20I	TGGCCA	1 cut(s)	435
MspA1I	CMGCKG	3 cut(s)	128, 154, 1511
MspI	CCGG	7 cut(s)	80, 164, 175, 273, 347, 451, 1333
MspR9I	CCNGG	7 cut(s)	81, 165, 281, 392, 452, 1994, 2082
Mva1269I	GAATGC	2 cut(s)	1282, 1915
MvaI	CCWGG	4 cut(s)	281, 392, 1994, 2082
NciI	CCSGG	3 cut(s)	81, 165, 452
NdeII	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
NlaIII	CATG	7 cut(s)	442, 731, 1202, 1466, 1565, 1705, 2115
NlaIV	GGNNCC	6 cut(s)	194, 277, 342, 918, 1578, 1938
NsbI	TGCGCA	1 cut(s)	1686
NsiI	ATGCAT	1 cut(s)	1915
NspI	RCATGY	2 cut(s)	442, 1202
PciI	ACATGT	1 cut(s)	438
PctI	GAATGC	2 cut(s)	1282, 1915
PdmI	GAANNNNTTC	2 cut(s)	933, 2053
PfeI	GAWTC	9 cut(s)	1439, 1469, 1750, 1793, 1823, 1858, 2138, 2171, 2234
PflFI	GACNNNGTC	1 cut(s)	1231
PflMI	CCANNNNNTGG	2 cut(s)	686, 868
PfoI	TCCNGGA	2 cut(s)	1992, 2080
PleI	GAGTC	4 cut(s)	105, 212, 692, 2247
PpsI	GAGTC	4 cut(s)	105, 212, 692, 2247
PpuMI	RGGWCCY	1 cut(s)	1577
PscI	ACATGT	1 cut(s)	438
PsiI	TTATAA	2 cut(s)	1397, 1670
Psp5II	RGGWCCY	1 cut(s)	1577
Psp6I	CCWGG	4 cut(s)	279, 390, 1992, 2080
PspGI	CCWGG	4 cut(s)	279, 390, 1992, 2080
PspN4I	GGNNCC	6 cut(s)	194, 277, 342, 918, 1578, 1938
PspPI	GGNCC	4 cut(s)	349, 1192, 1577, 2075
PspPPI	RGGWCCY	1 cut(s)	1577
PstNI	CAGNNNCTG	2 cut(s)	157, 1514
PsuI	RGATCY	2 cut(s)	340, 1663
PsyI	GACNNNGTC	1 cut(s)	1231
PvuII	CAGCTG	2 cut(s)	154, 1511
RsaI	GTAC	3 cut(s)	33, 66, 1927
RsaNI	GTAC	3 cut(s)	32, 65, 1926
RseI	CAYNNNNRTG	3 cut(s)	335, 1323, 2110
Rsr2I	CGGWCCG	1 cut(s)	349
RsrII	CGGWCCG	1 cut(s)	349
SaqAI	TTAA	2 cut(s)	486, 945
Sau3AI	GATC	7 cut(s)	103, 340, 733, 1360, 1663, 1895, 2099
Sau96I	GGNCC	4 cut(s)	349, 1192, 1577, 2075
SchI	GAGTC	4 cut(s)	105, 212, 692, 2248
ScrFI	CCNGG	7 cut(s)	81, 165, 281, 392, 452, 1994, 2082
SduI	GDGCHC	3 cut(s)	197, 999, 1094
SinI	GGWCC	3 cut(s)	349, 1577, 2075
SmiMI	CAYNNNNRTG	3 cut(s)	335, 1323, 2110
SmlI	CTYRAG	2 cut(s)	655, 1970
SmoI	CTYRAG	2 cut(s)	655, 1970
SpeI	ACTAGT	1 cut(s)	143
SsiI	CCGC	8 cut(s)	77, 117, 126, 161, 352, 539, 1315, 1535
SspI	AATATT	1 cut(s)	1062
SspMI	CTAG	4 cut(s)	144, 791, 1262, 1707
StyD4I	CCNGG	7 cut(s)	79, 163, 279, 390, 450, 1992, 2080
TaaI	ACNGT	8 cut(s)	950, 1054, 1165, 1520, 1617, 1780, 1832, 2002
TaiI	ACGT	2 cut(s)	138, 1552
TaqI	TCGA	3 cut(s)	213, 1186, 2237
TaqII	GACCGA	1 cut(s)	176
TauI	GCSGC	3 cut(s)	79, 128, 163
TfiI	GAWTC	9 cut(s)	1439, 1469, 1750, 1793, 1823, 1858, 2138, 2171, 2234
Tru1I	TTAA	2 cut(s)	486, 945
Tru9I	TTAA	2 cut(s)	486, 945
TscAI	CASTG	5 cut(s)	33, 370, 1059, 1414, 1785
TseI	GCWGC	7 cut(s)	151, 154, 157, 377, 1280, 1508, 1511
TspDTI	ATGAA	6 cut(s)	744, 1492, 1578, 1690, 2025, 2145
TspGWI	ACGGA	2 cut(s)	52, 2245
TspRI	CASTG	5 cut(s)	33, 370, 1059, 1414, 1785
Tth111I	GACNNNGTC	1 cut(s)	1231
Van91I	CCANNNNNTGG	2 cut(s)	686, 868
VpaK11BI	GGWCC	3 cut(s)	349, 1577, 2075
XagI	CCTNNNNNAGG	2 cut(s)	670, 2085
XapI	RAATTY	6 cut(s)	168, 712, 1112, 1336, 1403, 1637
XceI	RCATGY	2 cut(s)	442, 1202
XmiI	GTMKAC	2 cut(s)	140, 1531
XmnI	GAANNNNTTC	2 cut(s)	933, 2053
XspI	CTAG	4 cut(s)	144, 791, 1262, 1707
Zsp2I	ATGCAT	1 cut(s)	1915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.