Peroxisome biogenesis protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SecE | PF00584 | 104 - 156 | 2e-06 | SecE/Sec61-gamma subunits of protein translocation complex |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 182 |
| AciI | CCGC | 1 cut(s) | 11 |
| AclWI | GGATC | 1 cut(s) | 219 |
| AcoI | YGGCCR | 1 cut(s) | 350 |
| AcuI | CTGAAG | 2 cut(s) | 356, 392 |
| AfaI | GTAC | 2 cut(s) | 243, 341 |
| AflIII | ACRYGT | 1 cut(s) | 128 |
| AgsI | TTSAA | 2 cut(s) | 274, 347 |
| AjnI | CCWGG | 2 cut(s) | 58, 352 |
| AluBI | AGCT | 3 cut(s) | 68, 334, 447 |
| AluI | AGCT | 3 cut(s) | 68, 334, 447 |
| AlwI | GGATC | 1 cut(s) | 219 |
| AoxI | GGCC | 1 cut(s) | 350 |
| ApeKI | GCWGC | 2 cut(s) | 194, 322 |
| AseI | ATTAAT | 1 cut(s) | 51 |
| AspS9I | GGNCC | 1 cut(s) | 93 |
| AvaII | GGWCC | 1 cut(s) | 93 |
| AxyI | CCTNAGG | 1 cut(s) | 246 |
| BalI | TGGCCA | 1 cut(s) | 352 |
| BanI | GGYRCC | 1 cut(s) | 182 |
| BanII | GRGCYC | 1 cut(s) | 255 |
| BbsI | GAAGAC | 1 cut(s) | 380 |
| BbvCI | CCTCAGC | 1 cut(s) | 443 |
| BbvI | GCAGC | 2 cut(s) | 181, 334 |
| BccI | CCATC | 1 cut(s) | 230 |
| BceAI | ACGGC | 1 cut(s) | 101 |
| BciT130I | CCWGG | 2 cut(s) | 60, 354 |
| BisI | GCNGC | 3 cut(s) | 12, 195, 323 |
| BlsI | GCNGC | 3 cut(s) | 13, 196, 324 |
| Bme1390I | CCNGG | 2 cut(s) | 60, 354 |
| Bme18I | GGWCC | 1 cut(s) | 93 |
| BmgT120I | GGNCC | 1 cut(s) | 93 |
| BmiI | GGNNCC | 3 cut(s) | 94, 184, 252 |
| BmrFI | CCNGG | 2 cut(s) | 60, 354 |
| BpiI | GAAGAC | 1 cut(s) | 380 |
| Bpu10I | CCTNAGC | 1 cut(s) | 443 |
| BpuEI | CTTGAG | 1 cut(s) | 338 |
| BsaBI | GATNNNNATC | 1 cut(s) | 216 |
| BsaJI | CCNNGG | 2 cut(s) | 27, 59 |
| Bse21I | CCTNAGG | 1 cut(s) | 246 |
| Bse8I | GATNNNNATC | 1 cut(s) | 216 |
| BseBI | CCWGG | 2 cut(s) | 60, 354 |
| BseDI | CCNNGG | 2 cut(s) | 27, 59 |
| BseGI | GGATG | 2 cut(s) | 12, 55 |
| BseJI | GATNNNNATC | 1 cut(s) | 216 |
| BseMII | CTCAG | 4 cut(s) | 254, 260, 457, 481 |
| BseXI | GCAGC | 2 cut(s) | 181, 334 |
| BshFI | GGCC | 1 cut(s) | 352 |
| BshNI | GGYRCC | 1 cut(s) | 182 |
| BslFI | GGGAC | 1 cut(s) | 106 |
| BsmFI | GGGAC | 1 cut(s) | 106 |
| BsnI | GGCC | 1 cut(s) | 352 |
| Bsp1286I | GDGCHC | 1 cut(s) | 255 |
| Bsp143I | GATC | 3 cut(s) | 99, 211, 296 |
| BspACI | CCGC | 1 cut(s) | 11 |
| BspANI | GGCC | 1 cut(s) | 352 |
| BspCNI | CTCAG | 4 cut(s) | 255, 259, 456, 480 |
| BspLI | GGNNCC | 3 cut(s) | 94, 184, 252 |
| BspPI | GGATC | 1 cut(s) | 219 |
| BspT107I | GGYRCC | 1 cut(s) | 182 |
| BssECI | CCNNGG | 2 cut(s) | 27, 59 |
| BssMI | GATC | 3 cut(s) | 99, 211, 296 |
| Bst2UI | CCWGG | 2 cut(s) | 60, 354 |
| Bst4CI | ACNGT | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 2 cut(s) | 66, 368 |
| BstDEI | CTNAG | 4 cut(s) | 246, 263, 443, 467 |
| BstDSI | CCRYGG | 1 cut(s) | 27 |
| BstF5I | GGATG | 2 cut(s) | 12, 55 |
| BstKTI | GATC | 3 cut(s) | 102, 214, 299 |
| BstMBI | GATC | 3 cut(s) | 99, 211, 296 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 322, 331 |
| BstNI | CCWGG | 2 cut(s) | 60, 354 |
| BstNSI | RCATGY | 1 cut(s) | 132 |
| BstSCI | CCNGG | 2 cut(s) | 58, 352 |
| BstV1I | GCAGC | 2 cut(s) | 181, 334 |
| BstV2I | GAAGAC | 1 cut(s) | 380 |
| Bsu36I | CCTNAGG | 1 cut(s) | 246 |
| BsuRI | GGCC | 1 cut(s) | 352 |
| BtgI | CCRYGG | 1 cut(s) | 27 |
| BtsCI | GGATG | 2 cut(s) | 12, 55 |
| BtsIMutI | CAGTG | 1 cut(s) | 288 |
| Cac8I | GCNNGC | 2 cut(s) | 66, 368 |
| Cfr13I | GGNCC | 1 cut(s) | 93 |
| CseI | GACGC | 1 cut(s) | 186 |
| Csp6I | GTAC | 2 cut(s) | 242, 340 |
| CviAII | CATG | 1 cut(s) | 129 |
| CviJI | RGCY | 9 cut(s) | 14, 68, 167, 253, 325, 334, 352, 447, 458 |
| CviKI_1 | RGCY | 9 cut(s) | 14, 68, 167, 253, 325, 334, 352, 447, 458 |
| CviQI | GTAC | 2 cut(s) | 242, 340 |
| DdeI | CTNAG | 4 cut(s) | 246, 263, 443, 467 |
| DpnI | GATC | 3 cut(s) | 101, 213, 298 |
| DpnII | GATC | 3 cut(s) | 99, 211, 296 |
| EaeI | YGGCCR | 1 cut(s) | 350 |
| Eco24I | GRGCYC | 1 cut(s) | 255 |
| Eco47I | GGWCC | 1 cut(s) | 93 |
| Eco57I | CTGAAG | 2 cut(s) | 356, 392 |
| Eco81I | CCTNAGG | 1 cut(s) | 246 |
| EcoRII | CCWGG | 2 cut(s) | 58, 352 |
| EcoT38I | GRGCYC | 1 cut(s) | 255 |
| FaeI | CATG | 1 cut(s) | 132 |
| FaiI | YATR | 5 cut(s) | 87, 130, 190, 192, 481 |
| FaqI | GGGAC | 1 cut(s) | 106 |
| FatI | CATG | 1 cut(s) | 128 |
| FauNDI | CATATG | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 3 cut(s) | 12, 195, 323 |
| FokI | GGATG | 2 cut(s) | 19, 42 |
| FriOI | GRGCYC | 1 cut(s) | 255 |
| Fsp4HI | GCNGC | 3 cut(s) | 12, 195, 323 |
| GluI | GCNGC | 3 cut(s) | 12, 195, 323 |
| HaeIII | GGCC | 1 cut(s) | 352 |
| HgaI | GACGC | 1 cut(s) | 186 |
| Hin1II | CATG | 1 cut(s) | 132 |
| HinfI | GANTC | 6 cut(s) | 139, 265, 328, 382, 434, 463 |
| Hpy188I | TCNGA | 1 cut(s) | 264 |
| Hpy188III | TCNNGA | 2 cut(s) | 248, 469 |
| HpyAV | CCTTC | 3 cut(s) | 129, 265, 269 |
| HpyCH4III | ACNGT | 1 cut(s) | 283 |
| HpyCH4V | TGCA | 1 cut(s) | 419 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 322, 331 |
| HpyF3I | CTNAG | 4 cut(s) | 246, 263, 443, 467 |
| Hsp92II | CATG | 1 cut(s) | 132 |
| Kzo9I | GATC | 3 cut(s) | 99, 211, 296 |
| LmnI | GCTCC | 1 cut(s) | 250 |
| LpnPI | CCDG | 9 cut(s) | 27, 45, 49, 72, 135, 233, 339, 366, 454 |
| Lsp1109I | GCAGC | 2 cut(s) | 181, 334 |
| MaeIII | GTNAC | 1 cut(s) | 124 |
| MalI | GATC | 3 cut(s) | 101, 213, 298 |
| MboI | GATC | 3 cut(s) | 99, 211, 296 |
| MboII | GAAGA | 1 cut(s) | 385 |
| MhlI | GDGCHC | 1 cut(s) | 255 |
| MlsI | TGGCCA | 1 cut(s) | 352 |
| MluNI | TGGCCA | 1 cut(s) | 352 |
| MlyI | GAGTC | 5 cut(s) | 133, 274, 337, 376, 428 |
| MnlI | CCTC | 2 cut(s) | 255, 452 |
| Mox20I | TGGCCA | 1 cut(s) | 352 |
| MscI | TGGCCA | 1 cut(s) | 352 |
| MseI | TTAA | 1 cut(s) | 51 |
| Msp20I | TGGCCA | 1 cut(s) | 352 |
| MspA1I | CMGCKG | 1 cut(s) | 334 |
| MspR9I | CCNGG | 2 cut(s) | 60, 354 |
| MvaI | CCWGG | 2 cut(s) | 60, 354 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 322, 331 |
| NdeI | CATATG | 1 cut(s) | 190 |
| NdeII | GATC | 3 cut(s) | 99, 211, 296 |
| NlaIII | CATG | 1 cut(s) | 132 |
| NlaIV | GGNNCC | 3 cut(s) | 94, 184, 252 |
| NmeAIII | GCCGAG | 1 cut(s) | 351 |
| NspI | RCATGY | 1 cut(s) | 132 |
| PciI | ACATGT | 1 cut(s) | 128 |
| PfeI | GAWTC | 1 cut(s) | 463 |
| PkrI | GCNGC | 3 cut(s) | 13, 196, 324 |
| PleI | GAGTC | 5 cut(s) | 133, 273, 336, 376, 428 |
| PpsI | GAGTC | 5 cut(s) | 133, 273, 336, 376, 428 |
| PscI | ACATGT | 1 cut(s) | 128 |
| PshBI | ATTAAT | 1 cut(s) | 51 |
| Psp6I | CCWGG | 2 cut(s) | 58, 352 |
| PspGI | CCWGG | 2 cut(s) | 58, 352 |
| PspN4I | GGNNCC | 3 cut(s) | 94, 184, 252 |
| PspPI | GGNCC | 1 cut(s) | 93 |
| PvuII | CAGCTG | 1 cut(s) | 334 |
| RsaI | GTAC | 2 cut(s) | 243, 341 |
| RsaNI | GTAC | 2 cut(s) | 242, 340 |
| SaqAI | TTAA | 1 cut(s) | 51 |
| SatI | GCNGC | 3 cut(s) | 12, 195, 323 |
| Sau3AI | GATC | 3 cut(s) | 99, 211, 296 |
| Sau96I | GGNCC | 1 cut(s) | 93 |
| SchI | GAGTC | 5 cut(s) | 133, 274, 337, 376, 428 |
| ScrFI | CCNGG | 2 cut(s) | 60, 354 |
| SduI | GDGCHC | 1 cut(s) | 255 |
| SetI | ASST | 7 cut(s) | 38, 46, 70, 247, 336, 358, 449 |
| SinI | GGWCC | 1 cut(s) | 93 |
| SmlI | CTYRAG | 1 cut(s) | 317 |
| SmoI | CTYRAG | 1 cut(s) | 317 |
| SsiI | CCGC | 1 cut(s) | 11 |
| StyD4I | CCNGG | 2 cut(s) | 58, 352 |
| TaaI | ACNGT | 1 cut(s) | 283 |
| TatI | WGTACW | 1 cut(s) | 339 |
| TauI | GCSGC | 1 cut(s) | 14 |
| TfiI | GAWTC | 1 cut(s) | 463 |
| Tru1I | TTAA | 1 cut(s) | 51 |
| Tru9I | TTAA | 1 cut(s) | 51 |
| TscAI | CASTG | 1 cut(s) | 288 |
| TseI | GCWGC | 2 cut(s) | 194, 322 |
| TspDTI | ATGAA | 2 cut(s) | 295, 414 |
| TspGWI | ACGGA | 2 cut(s) | 16, 350 |
| TspRI | CASTG | 1 cut(s) | 288 |
| VpaK11BI | GGWCC | 1 cut(s) | 93 |
| VspI | ATTAAT | 1 cut(s) | 51 |
| XceI | RCATGY | 1 cut(s) | 132 |