pycom11g26420
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
28979433 .. 28980254
822 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g26420.1

Sequence Viewer

Length: 822 bp
ATGACACCCTTCAACTCTCTCACCAAAATCGCCGCCGTCCCAAGATTTGCAGTACAAAATCTATCCTGCCGCAGATCAATCGCCAACACAATCTCCGCCGATCACGATGCTCCCACCGTCGCATACCTCATAAACTCATGTGGGTTGTCGCCGGAATCCGCCGCCGAAGCTTCCCAGAAGCTTAAGCTCCGGTCTTCCGACAGAGCGGACTCTGTTCTGGAGCTCCTGAGAACGCACGAGTTCTCCGCCGCCGACATCTCAAAGCTCGTGAGACGCCACCCTTTGATCCTCGCCGCCGACGCCGAAAAGACCCTTTTGCCCAAGCTCGAGTTCTTCACCTCCAAAGGGATTTCGAGGCTCGATCTCGCCAGAACTGTGAGTTACGATCCTTCCCTTTTGAAAATAAGTTTGAAAAATCAGATTATCCCGTCTTACAATTTCCTCAAAGCCCTTTTGATTTCTGATGAGAGGGTGATTAGTATTCTGAAGCACAAGGCGTGGATCTTCCTCGATAATCTGTCGAAAAATGTGATGCCGAATATCGGTCTCCTGCGAGATTTGGGGATGCCGGAATCCTCCATAGCTCTGCTGCTTGCGCAATACCCTAACATTTTGATGAAAAAGCATGAATTGTTCAGTGAGATTGTGAATGAGGTGGAAGAATTCGGATTCGAGCCCGAGAAATCAAACTTTGTGGCGGCAATGCGGGTGATGTCCGGTAAAAAATCGATCTTGAAACGAAACCAAGAGGCTTACAGGAAATGTGGTTGGTCGGAGGATGATCGATCCTCTCTGCTTTCAGGTCCAATCCCTTGTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

274

Amino Acids

30.42

Weight (kDa)

9.1

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 73 - 228 1.2e-22 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 597
AccBSI CCGCTC 1 cut(s) 206
AclWI GGATC 4 cut(s) 280, 380, 509, 780
AcsI RAATTY 1 cut(s) 662
AcuI CTGAAG 1 cut(s) 506
AcyI GRCGYC 2 cut(s) 274, 300
AfaI GTAC 1 cut(s) 54
AfiI CCNNNNNNNGG 2 cut(s) 345, 542
AflII CTTAAG 1 cut(s) 182
AgsI TTSAA 4 cut(s) 13, 400, 412, 736
AjuI GAANNNNNNNTTGG 2 cut(s) 314, 346
AluBI AGCT 7 cut(s) 170, 181, 187, 223, 265, 325, 584
AluI AGCT 7 cut(s) 170, 181, 187, 223, 265, 325, 584
Alw21I GWGCWC 1 cut(s) 225
Alw26I GTCTC 2 cut(s) 265, 551
AlwI GGATC 4 cut(s) 280, 380, 509, 780
Ama87I CYCGRG 2 cut(s) 326, 677
ApeKI GCWGC 1 cut(s) 589
ApoI RAATTY 1 cut(s) 662
AspLEI GCGC 1 cut(s) 598
AspS9I GGNCC 1 cut(s) 803
AsuHPI GGTGA 4 cut(s) 13, 328, 484, 721
AvaI CYCGRG 2 cut(s) 326, 677
AvaII GGWCC 1 cut(s) 803
BanII GRGCYC 2 cut(s) 225, 678
BauI CACGAG 2 cut(s) 236, 266
BbsI GAAGAC 1 cut(s) 186
Bbv12I GWGCWC 1 cut(s) 225
BbvI GCAGC 1 cut(s) 576
BceAI ACGGC 1 cut(s) 20
BcgI CGANNNNNNTGC 4 cut(s) 61, 89, 95, 123
BcoDI GTCTC 2 cut(s) 265, 551
BfrI CTTAAG 1 cut(s) 182
BisI GCNGC 7 cut(s) 33, 70, 162, 249, 294, 590, 699
BlsI GCNGC 7 cut(s) 34, 71, 163, 250, 295, 591, 700
Bme18I GGWCC 1 cut(s) 803
BmeT110I CYCGRG 2 cut(s) 326, 677
BmgT120I GGNCC 1 cut(s) 803
BmsI GCATC 3 cut(s) 97, 522, 555
BpiI GAAGAC 1 cut(s) 186
BpmI CTGGAG 1 cut(s) 239
Bsa29I ATCGAT 2 cut(s) 728, 784
BsaHI GRCGYC 2 cut(s) 274, 300
BsaI GGTCTC 1 cut(s) 551
BsaWI WCCGGW 2 cut(s) 189, 716
BsaXI ACNNNNNCTCC 4 cut(s) 77, 107, 227, 257
Bsc4I CCNNNNNNNGG 2 cut(s) 345, 542
Bse3DI GCAATG 1 cut(s) 708
BseCI ATCGAT 2 cut(s) 728, 784
BseGI GGATG 2 cut(s) 570, 784
BseLI CCNNNNNNNGG 2 cut(s) 345, 542
BseMI GCAATG 1 cut(s) 708
BseMII CTCAG 1 cut(s) 218
BseXI GCAGC 1 cut(s) 576
BshVI ATCGAT 2 cut(s) 728, 784
BsiHKAI GWGCWC 1 cut(s) 225
BsiHKCI CYCGRG 2 cut(s) 326, 677
BsiSI CCGG 4 cut(s) 152, 190, 569, 717
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 2 cut(s) 345, 542
BsmAI GTCTC 2 cut(s) 265, 551
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 1 cut(s) 23
Bso31I GGTCTC 1 cut(s) 551
BsoBI CYCGRG 2 cut(s) 326, 677
Bsp1286I GDGCHC 2 cut(s) 225, 678
Bsp143I GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
BspCNI CTCAG 1 cut(s) 219
BspDI ATCGAT 2 cut(s) 728, 784
BspPI GGATC 4 cut(s) 280, 380, 509, 780
BspTI CTTAAG 1 cut(s) 182
BspTNI GGTCTC 1 cut(s) 551
BsrBI CCGCTC 1 cut(s) 206
BsrDI GCAATG 1 cut(s) 708
BssMI GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
BssNI GRCGYC 2 cut(s) 274, 300
BssSI CACGAG 2 cut(s) 236, 266
Bst2BI CACGAG 2 cut(s) 236, 266
Bst4CI ACNGT 2 cut(s) 118, 376
BstACI GRCGYC 2 cut(s) 274, 300
BstAFI CTTAAG 1 cut(s) 182
BstC8I GCNNGC 1 cut(s) 594
BstDEI CTNAG 1 cut(s) 227
BstF5I GGATG 2 cut(s) 570, 784
BstHHI GCGC 1 cut(s) 598
BstKTI GATC 9 cut(s) 77, 103, 288, 364, 388, 504, 732, 784, 788
BstMAI GTCTC 2 cut(s) 265, 551
BstMBI GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
BstMWI GCNNNNNNNGC 3 cut(s) 167, 299, 595
BstV1I GCAGC 1 cut(s) 576
BstV2I GAAGAC 1 cut(s) 186
BstX2I RGATCY 1 cut(s) 501
BstYI RGATCY 1 cut(s) 501
Bsu15I ATCGAT 2 cut(s) 728, 784
BsuTUI ATCGAT 2 cut(s) 728, 784
BtsCI GGATG 2 cut(s) 570, 784
BtsIMutI CAGTG 1 cut(s) 643
Cac8I GCNNGC 1 cut(s) 594
CfoI GCGC 1 cut(s) 598
Cfr13I GGNCC 1 cut(s) 803
ClaI ATCGAT 2 cut(s) 728, 784
CseI GACGC 2 cut(s) 282, 308
Csp6I GTAC 1 cut(s) 53
CspCI CAANNNNNGTGG 2 cut(s) 675, 710
CviAII CATG 3 cut(s) 138, 626, 819
CviQI GTAC 1 cut(s) 53
DdeI CTNAG 1 cut(s) 227
DpnI GATC 9 cut(s) 76, 102, 287, 363, 387, 503, 731, 783, 787
DpnII GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
EciI GGCGGA 3 cut(s) 85, 148, 235
Ecl136II GAGCTC 1 cut(s) 223
Eco24I GRGCYC 2 cut(s) 225, 678
Eco31I GGTCTC 1 cut(s) 551
Eco47I GGWCC 1 cut(s) 803
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 1 cut(s) 506
Eco88I CYCGRG 2 cut(s) 326, 677
EcoICRI GAGCTC 1 cut(s) 223
EcoRI GAATTC 1 cut(s) 662
EcoT38I GRGCYC 2 cut(s) 225, 678
Esp3I CGTCTC 1 cut(s) 265
FaeI CATG 3 cut(s) 141, 629, 822
FaiI YATR 6 cut(s) 124, 131, 139, 581, 627, 820
FaqI GGGAC 1 cut(s) 23
FatI CATG 3 cut(s) 137, 625, 818
FauI CCCGC 1 cut(s) 699
Fnu4HI GCNGC 7 cut(s) 33, 70, 162, 249, 294, 590, 699
FokI GGATG 2 cut(s) 577, 791
FriOI GRGCYC 2 cut(s) 225, 678
Fsp4HI GCNGC 7 cut(s) 33, 70, 162, 249, 294, 590, 699
FspI TGCGCA 1 cut(s) 597
GlaI GCGC 1 cut(s) 597
GluI GCNGC 7 cut(s) 33, 70, 162, 249, 294, 590, 699
GsuI CTGGAG 1 cut(s) 239
HapII CCGG 4 cut(s) 152, 190, 569, 717
HgaI GACGC 2 cut(s) 282, 308
HhaI GCGC 1 cut(s) 598
Hin1I GRCGYC 2 cut(s) 274, 300
Hin1II CATG 3 cut(s) 141, 629, 822
Hin6I GCGC 1 cut(s) 596
HinP1I GCGC 1 cut(s) 596
HindIII AAGCTT 2 cut(s) 168, 179
HinfI GANTC 4 cut(s) 155, 209, 572, 669
HpaII CCGG 4 cut(s) 152, 190, 569, 717
HphI GGTGA 4 cut(s) 13, 328, 484, 721
Hpy188I TCNGA 6 cut(s) 199, 420, 463, 486, 668, 775
Hpy188III TCNNGA 5 cut(s) 104, 218, 226, 268, 733
Hpy99I CGWCG 2 cut(s) 122, 302
HpyAV CCTTC 2 cut(s) 19, 399
HpyCH4III ACNGT 2 cut(s) 118, 376
HpyCH4V TGCA 2 cut(s) 50, 818
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 299, 595
HpyF3I CTNAG 1 cut(s) 227
Hsp92I GRCGYC 2 cut(s) 274, 300
Hsp92II CATG 3 cut(s) 141, 629, 822
HspAI GCGC 1 cut(s) 596
Kzo9I GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
LmnI GCTCC 4 cut(s) 115, 192, 220, 228
Lsp1109I GCAGC 1 cut(s) 576
LweI GCATC 3 cut(s) 97, 522, 555
MaeIII GTNAC 1 cut(s) 380
MalI GATC 9 cut(s) 76, 102, 287, 363, 387, 503, 731, 783, 787
MbiI CCGCTC 1 cut(s) 206
MboI GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
MboII GAAGA 4 cut(s) 186, 325, 496, 671
MflI RGATCY 1 cut(s) 501
MhlI GDGCHC 2 cut(s) 225, 678
MluCI AATT 3 cut(s) 436, 629, 662
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 2 cut(s) 222, 753
MseI TTAA 1 cut(s) 183
MslI CAYNNNNRTG 1 cut(s) 614
MspCI CTTAAG 1 cut(s) 182
MspI CCGG 4 cut(s) 152, 190, 569, 717
MwoI GCNNNNNNNGC 3 cut(s) 167, 299, 595
NdeII GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
NlaIII CATG 3 cut(s) 141, 629, 822
NsbI TGCGCA 1 cut(s) 597
PaeR7I CTCGAG 1 cut(s) 326
PfeI GAWTC 3 cut(s) 155, 572, 669
PkrI GCNGC 7 cut(s) 34, 71, 163, 250, 295, 591, 700
PleI GAGTC 1 cut(s) 203
PpsI GAGTC 1 cut(s) 203
Psp124BI GAGCTC 1 cut(s) 225
PspPI GGNCC 1 cut(s) 803
PspXI VCTCGAGB 1 cut(s) 326
PsuI RGATCY 1 cut(s) 501
RsaI GTAC 1 cut(s) 54
RsaNI GTAC 1 cut(s) 53
RseI CAYNNNNRTG 1 cut(s) 614
SacI GAGCTC 1 cut(s) 225
SaqAI TTAA 1 cut(s) 183
SatI GCNGC 7 cut(s) 33, 70, 162, 249, 294, 590, 699
Sau3AI GATC 9 cut(s) 74, 100, 285, 361, 385, 501, 729, 781, 785
Sau96I GGNCC 1 cut(s) 803
SchI GAGTC 1 cut(s) 203
SduI GDGCHC 2 cut(s) 225, 678
SfaNI GCATC 3 cut(s) 97, 522, 555
Sfr274I CTCGAG 1 cut(s) 326
SinI GGWCC 1 cut(s) 803
SlaI CTCGAG 1 cut(s) 326
SmiMI CAYNNNNRTG 1 cut(s) 614
SmlI CTYRAG 2 cut(s) 182, 326
SmoI CTYRAG 2 cut(s) 182, 326
Sse9I AATT 3 cut(s) 436, 629, 662
SstI GAGCTC 1 cut(s) 225
TaaI ACNGT 2 cut(s) 118, 376
TaqI TCGA 8 cut(s) 327, 353, 360, 510, 521, 672, 728, 784
TaqII GACCGA 1 cut(s) 533
TasI AATT 3 cut(s) 436, 629, 662
TatI WGTACW 1 cut(s) 52
TauI GCSGC 6 cut(s) 35, 72, 164, 251, 296, 701
TfiI GAWTC 3 cut(s) 155, 572, 669
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TscAI CASTG 1 cut(s) 643
TseI GCWGC 1 cut(s) 589
TspDTI ATGAA 2 cut(s) 632, 642
TspRI CASTG 1 cut(s) 643
Vha464I CTTAAG 1 cut(s) 182
VpaK11BI GGWCC 1 cut(s) 803
XapI RAATTY 1 cut(s) 662
XhoI CTCGAG 1 cut(s) 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.