Rorug03G0306000
ERF Family

Mitochondrial transcription termination factor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000115
Physical Location & Seq
Reverse (-)
32391100 .. 32445818
54719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0306000.1

Sequence Viewer

Length: 1587 bp
ATGCGGAAGCTCAAAACCACTGTTTGCCTAATCACAGCCACTACTGCTGGCCTCACCTTCCATGCCTTCAACCCTAATTCCTCCCCAGACTTTCCCGACAAAATTCGGACAGCCGTTCACGGCGTCGTTCGCTCTTCCCGCGCAATCTCCACCATTGCATTGACTGCCGTTGACTACAAGTTCACCTTGCGTGGACTCCCGGTGGACTCAGATGAGTACCGCCGCAAGCTATCTGAGGTTCATTTTCGATCAGCTTGGAGAATTCTGAAATTGTGTGAAGCCAACAAAGGATTTTATGTGAAAGCTGGTCAATTTGTTGCAGCTCTGCGTCAGGTTCCAAAAGAATACTCATCAACTCTTTCCTCATTACAGGATCAGGCAGTTCCTTGTCACTTTAAAGCTATTGAAGAAGTACTAATTCGTAATCTGGGGCGCAACCTGTCCGATACGTTTTTGTCACTGGATGAACAACCCTTAGCTGCTGCATCAATTGCTCAGGTACACAAAGCAGTTCTGAAGGATCATCAAGCAGTAGCAATCAAGGTGCAGTACCCTGGTCTGGAGCAGCAAATGAAACTAGATACAACAACAATGTATTTCATTTCAAAATCCATTACATGGTTTTTCCCAGAGTACAGATTTGGATGGCTGGTAGCAGAGTTTGTGCAGGCTATCTCTCTTGAGCTTGATTTTATTCAAGAAGCTGGAAACTCTGAGAGAACTGCCAATAATTTCAAAAACAACAAATGGGTCAAGGTTCCTCATGTATTTTGGGGTTTGACAACTAAACAAGTTCTGACGATGGAATTCTGTACTGGACACAAGGTTGATGATGTAGACTATCTGAAGGAAAGGAAAATAGATCCAGTGAAGGTGGCCAAAGTGTTGTTGGAAATGTTTGCTGAAATGATTTTTATCCATGGTTTCTTGCACGGAGATCCGCACCCTGGTAATATATTAGTTTCTCCAGAAGGGCAGAATGGCTTTTCTTTGGTTCTTCTAGATCATGGAATATACAAACAACTCGATGATAAATTTAGGTTGGACTACTGTCAGCTCTGGAAGGCTCTAATTCTTCTCGACTCAAAAAAGTTGCAGCATTTGGGGGAGCAGTTTGGTGTTGCAAAGTATTCTAAATACTTTCCTGTCATTTTTACAGGAAGAACTGTTGACAGTACATCGGCTCTTGGTAAAGGAATGTCAACTAAAGAGAGAAGGAAATTAAAGCACGAGCTGCAATCCCTAAAGATGGAGGACATATCTTCATTTATGGAATCTTTGCCATCTGACTTCCTCACAATATTGCGTACAGATGGACTATTGAGGTCTATTGCTAGTAAGTTGGGCGATTCACAAAGAGTCAGGATACTAGCCTATGCCAAATATGCACTATATGGTCTTTCCCCAAAGTTGAATCCAGAATCTGACAATGCTATTAAAGTAAAGTTCTCACAATTGACAGCATATGTGAGTTACCTTCAGTTAAGGCTTATTCTTGAGGTCCTAGAGCTGCTTTCTTGGATAGCAAAGGTCAAGCAGCTTCTATTTAATTTTTATGAAAAGAACGGTGGCGCCCTGGTGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

528

Amino Acids

59.92

Weight (kDa)

9.27

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 123 - 367 1e-86 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1571
AccB7I CCANNNNNTGG 1 cut(s) 618
AccI GTMKAC 1 cut(s) 837
AccII CGCG 1 cut(s) 141
AciI CCGC 5 cut(s) 4, 139, 220, 223, 941
AclWI GGATC 4 cut(s) 381, 528, 857, 932
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 4 cut(s) 102, 261, 806, 1034
AcuI CTGAAG 3 cut(s) 536, 866, 1463
AcyI GRCGYC 2 cut(s) 123, 1572
AfaI GTAC 8 cut(s) 218, 414, 501, 551, 635, 814, 1177, 1309
AfiI CCNNNNNNNGG 4 cut(s) 559, 618, 947, 1249
AgsI TTSAA 6 cut(s) 70, 407, 606, 698, 736, 1414
AjnI CCWGG 3 cut(s) 553, 946, 1575
AlwI GGATC 4 cut(s) 381, 528, 857, 932
AlwNI CAGNNNCTG 1 cut(s) 1424
AoxI GGCC 2 cut(s) 49, 876
ApeKI GCWGC 8 cut(s) 320, 479, 482, 565, 1096, 1234, 1510, 1537
ApoI RAATTY 4 cut(s) 102, 261, 806, 1034
AspLEI GCGC 3 cut(s) 143, 435, 1574
AspS9I GGNCC 1 cut(s) 1501
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 2 cut(s) 46, 175
AvaII GGWCC 1 cut(s) 1501
BalI TGGCCA 1 cut(s) 878
BanI GGYRCC 1 cut(s) 1571
BauI CACGAG 1 cut(s) 1229
BbvI GCAGC 8 cut(s) 332, 466, 469, 577, 1108, 1221, 1497, 1549
BccI CCATC 5 cut(s) 639, 796, 1243, 1291, 1307
BceAI ACGGC 3 cut(s) 98, 136, 152
BciT130I CCWGG 3 cut(s) 555, 948, 1577
BciVI GTATCC 1 cut(s) 1359
BcnI CCSGG 1 cut(s) 200
BfaI CTAG 5 cut(s) 578, 1001, 1335, 1370, 1505
BfoI RGCGCY 1 cut(s) 1575
BfuI GTATCC 1 cut(s) 1359
BisI GCNGC 9 cut(s) 223, 321, 480, 483, 566, 1097, 1235, 1511, 1538
BlsI GCNGC 9 cut(s) 224, 322, 481, 484, 567, 1098, 1236, 1512, 1539
BmcAI AGTACT 1 cut(s) 414
Bme1390I CCNGG 4 cut(s) 200, 555, 948, 1577
Bme18I GGWCC 1 cut(s) 1501
BmgT120I GGNCC 1 cut(s) 1501
BmiI GGNNCC 3 cut(s) 336, 759, 1573
BmrFI CCNGG 4 cut(s) 200, 555, 948, 1577
BmsI GCATC 1 cut(s) 494
BoxI GACNNNNGTC 1 cut(s) 1050
BpmI CTGGAG 2 cut(s) 581, 951
Bpu10I CCTNAGC 2 cut(s) 475, 495
BpuEI CTTGAG 2 cut(s) 701, 1517
BpuMI CCSGG 1 cut(s) 200
BsaBI GATNNNNATC 1 cut(s) 914
BsaHI GRCGYC 2 cut(s) 123, 1572
BsaJI CCNNGG 4 cut(s) 553, 919, 946, 1575
Bsc4I CCNNNNNNNGG 4 cut(s) 559, 618, 947, 1249
Bse1I ACTGG 3 cut(s) 465, 820, 866
Bse3DI GCAATG 1 cut(s) 153
Bse8I GATNNNNATC 1 cut(s) 914
BseBI CCWGG 3 cut(s) 555, 948, 1577
BseDI CCNNGG 4 cut(s) 553, 919, 946, 1575
BseGI GGATG 2 cut(s) 469, 650
BseJI GATNNNNATC 1 cut(s) 914
BseLI CCNNNNNNNGG 4 cut(s) 559, 618, 947, 1249
BseMI GCAATG 1 cut(s) 153
BseMII CTCAG 4 cut(s) 222, 225, 509, 705
BseNI ACTGG 3 cut(s) 465, 820, 866
BseXI GCAGC 8 cut(s) 332, 466, 469, 577, 1108, 1221, 1497, 1549
BsgI GTGCAG 2 cut(s) 566, 686
Bsh1236I CGCG 1 cut(s) 141
BshFI GGCC 2 cut(s) 51, 878
BshNI GGYRCC 1 cut(s) 1571
BsiSI CCGG 1 cut(s) 200
BslI CCNNNNNNNGG 4 cut(s) 559, 618, 947, 1249
BsnI GGCC 2 cut(s) 51, 878
Bsp143I GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
Bsp19I CCATGG 1 cut(s) 919
BspACI CCGC 5 cut(s) 4, 139, 220, 223, 941
BspANI GGCC 2 cut(s) 51, 878
BspCNI CTCAG 4 cut(s) 221, 226, 508, 706
BspFNI CGCG 1 cut(s) 141
BspLI GGNNCC 3 cut(s) 336, 759, 1573
BspPI GGATC 4 cut(s) 381, 528, 857, 932
BspQI GCTCTTC 1 cut(s) 139
BspT107I GGYRCC 1 cut(s) 1571
BsrDI GCAATG 1 cut(s) 153
BsrI ACTGG 3 cut(s) 465, 820, 866
BssECI CCNNGG 4 cut(s) 553, 919, 946, 1575
BssMI GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
BssNI GRCGYC 2 cut(s) 123, 1572
BssSI CACGAG 1 cut(s) 1229
BssT1I CCWWGG 1 cut(s) 919
Bst2BI CACGAG 1 cut(s) 1229
Bst2UI CCWGG 3 cut(s) 555, 948, 1577
Bst4CI ACNGT 5 cut(s) 22, 1052, 1168, 1175, 1568
Bst6I CTCTTC 1 cut(s) 139
BstACI GRCGYC 2 cut(s) 123, 1572
BstAPI GCANNNNNTGC 3 cut(s) 164, 491, 1234
BstC8I GCNNGC 3 cut(s) 49, 227, 669
BstDEI CTNAG 5 cut(s) 208, 234, 475, 495, 714
BstDSI CCRYGG 1 cut(s) 919
BstF5I GGATG 2 cut(s) 469, 650
BstFNI CGCG 1 cut(s) 141
BstH2I RGCGCY 1 cut(s) 1575
BstHHI GCGC 3 cut(s) 143, 435, 1574
BstKTI GATC 6 cut(s) 251, 376, 523, 865, 940, 1006
BstMBI GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
BstMWI GCNNNNNNNGC 7 cut(s) 44, 129, 138, 164, 491, 1234, 1385
BstNI CCWGG 3 cut(s) 555, 948, 1577
BstPAI GACNNNNGTC 1 cut(s) 1050
BstSCI CCNGG 4 cut(s) 198, 553, 946, 1575
BstUI CGCG 1 cut(s) 141
BstV1I GCAGC 8 cut(s) 332, 466, 469, 577, 1108, 1221, 1497, 1549
BstX2I RGATCY 2 cut(s) 862, 937
BstYI RGATCY 2 cut(s) 862, 937
BsuI GTATCC 1 cut(s) 1359
BsuRI GGCC 2 cut(s) 51, 878
BtgI CCRYGG 1 cut(s) 919
BtsCI GGATG 2 cut(s) 469, 650
BtsIMutI CAGTG 3 cut(s) 18, 458, 873
Cac8I GCNNGC 3 cut(s) 49, 227, 669
CaiI CAGNNNCTG 1 cut(s) 1424
CfoI GCGC 3 cut(s) 143, 435, 1574
Cfr13I GGNCC 1 cut(s) 1501
CseI GACGC 2 cut(s) 112, 317
Csp6I GTAC 8 cut(s) 217, 413, 500, 550, 634, 813, 1176, 1308
CviAII CATG 5 cut(s) 62, 618, 764, 920, 1007
CviQI GTAC 8 cut(s) 217, 413, 500, 550, 634, 813, 1176, 1308
DdeI CTNAG 5 cut(s) 208, 234, 475, 495, 714
DinI GGCGCC 1 cut(s) 1573
DpnI GATC 6 cut(s) 250, 375, 522, 864, 939, 1005
DpnII GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
DraI TTTAAA 1 cut(s) 397
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 1 cut(s) 139
EarI CTCTTC 1 cut(s) 139
Eco130I CCWWGG 1 cut(s) 919
Eco47I GGWCC 1 cut(s) 1501
Eco57I CTGAAG 3 cut(s) 536, 866, 1463
EcoO109I RGGNCCY 1 cut(s) 1501
EcoRI GAATTC 2 cut(s) 261, 806
EcoRII CCWGG 3 cut(s) 553, 946, 1575
EcoT14I CCWWGG 1 cut(s) 919
EgeI GGCGCC 1 cut(s) 1573
EheI GGCGCC 1 cut(s) 1573
ErhI CCWWGG 1 cut(s) 919
FaeI CATG 5 cut(s) 65, 621, 767, 923, 1010
FalI AAGNNNNNCTT 2 cut(s) 170, 202
FatI CATG 5 cut(s) 61, 617, 763, 919, 1006
FauI CCCGC 1 cut(s) 146
FauNDI CATATG 1 cut(s) 1465
FblI GTMKAC 1 cut(s) 837
Fnu4HI GCNGC 9 cut(s) 223, 321, 480, 483, 566, 1097, 1235, 1511, 1538
FokI GGATG 2 cut(s) 476, 657
Fsp4HI GCNGC 9 cut(s) 223, 321, 480, 483, 566, 1097, 1235, 1511, 1538
FspBI CTAG 5 cut(s) 578, 1001, 1335, 1370, 1505
GlaI GCGC 3 cut(s) 142, 434, 1573
GluI GCNGC 9 cut(s) 223, 321, 480, 483, 566, 1097, 1235, 1511, 1538
GsuI CTGGAG 2 cut(s) 581, 951
HaeII RGCGCY 1 cut(s) 1575
HaeIII GGCC 2 cut(s) 51, 878
HapII CCGG 1 cut(s) 200
HgaI GACGC 2 cut(s) 112, 317
HhaI GCGC 3 cut(s) 143, 435, 1574
Hin1I GRCGYC 2 cut(s) 123, 1572
Hin1II CATG 5 cut(s) 65, 621, 767, 923, 1010
Hin6I GCGC 3 cut(s) 141, 433, 1572
HinP1I GCGC 3 cut(s) 141, 433, 1572
HincII GTYRAC 3 cut(s) 172, 1171, 1203
HindII GTYRAC 3 cut(s) 172, 1171, 1203
HinfI GANTC 8 cut(s) 195, 206, 1082, 1274, 1349, 1359, 1414, 1421
HpaII CCGG 1 cut(s) 200
HphI GGTGA 2 cut(s) 46, 175
Hpy166II GTNNAC 9 cut(s) 118, 172, 183, 194, 205, 502, 838, 1171, 1203
Hpy8I GTNNAC 9 cut(s) 118, 172, 183, 194, 205, 502, 838, 1171, 1203
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 9 cut(s) 67, 76, 511, 841, 865, 965, 1057, 1209, 1487
HpyCH4III ACNGT 5 cut(s) 22, 1052, 1168, 1175, 1568
HpyCH4IV ACGT 1 cut(s) 449
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 129, 138, 164, 491, 1234, 1385
HpyF3I CTNAG 5 cut(s) 208, 234, 475, 495, 714
HpySE526I ACGT 1 cut(s) 449
Hsp92I GRCGYC 2 cut(s) 123, 1572
Hsp92II CATG 5 cut(s) 65, 621, 767, 923, 1010
HspAI GCGC 3 cut(s) 141, 433, 1572
KasI GGCGCC 1 cut(s) 1571
Kzo9I GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
LguI GCTCTTC 1 cut(s) 139
LmnI GCTCC 2 cut(s) 562, 1108
Lsp1109I GCAGC 8 cut(s) 332, 466, 469, 577, 1108, 1221, 1497, 1549
LweI GCATC 1 cut(s) 494
MaeI CTAG 5 cut(s) 578, 1001, 1335, 1370, 1505
MaeII ACGT 1 cut(s) 449
MaeIII GTNAC 3 cut(s) 389, 456, 1472
MalI GATC 6 cut(s) 250, 375, 522, 864, 939, 1005
MboI GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
MboII GAAGA 6 cut(s) 126, 419, 989, 1067, 1173, 1254
MfeI CAATTG 2 cut(s) 489, 1454
MflI RGATCY 2 cut(s) 862, 937
MlsI TGGCCA 1 cut(s) 878
MluNI TGGCCA 1 cut(s) 878
Mly113I GGCGCC 1 cut(s) 1572
MlyI GAGTC 4 cut(s) 189, 200, 1076, 1368
MmeI TCCRAC 2 cut(s) 870, 1023
MnlI CCTC 9 cut(s) 62, 91, 229, 373, 771, 1246, 1304, 1317, 1492
Mox20I TGGCCA 1 cut(s) 878
MscI TGGCCA 1 cut(s) 878
MseI TTAA 5 cut(s) 396, 1223, 1437, 1484, 1548
Msp20I TGGCCA 1 cut(s) 878
MspI CCGG 1 cut(s) 200
MspR9I CCNGG 4 cut(s) 200, 555, 948, 1577
MunI CAATTG 2 cut(s) 489, 1454
MvaI CCWGG 3 cut(s) 555, 948, 1577
MvnI CGCG 1 cut(s) 141
MwoI GCNNNNNNNGC 7 cut(s) 44, 129, 138, 164, 491, 1234, 1385
NarI GGCGCC 1 cut(s) 1572
NciI CCSGG 1 cut(s) 200
NcoI CCATGG 1 cut(s) 919
NdeI CATATG 1 cut(s) 1465
NdeII GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
NlaIII CATG 5 cut(s) 65, 621, 767, 923, 1010
NlaIV GGNNCC 3 cut(s) 336, 759, 1573
NmuCI GTSAC 2 cut(s) 389, 456
PciSI GCTCTTC 1 cut(s) 139
PfeI GAWTC 4 cut(s) 1274, 1349, 1414, 1421
PflMI CCANNNNNTGG 1 cut(s) 618
PkrI GCNGC 9 cut(s) 224, 322, 481, 484, 567, 1098, 1236, 1512, 1539
PleI GAGTC 4 cut(s) 189, 200, 1076, 1367
PluTI GGCGCC 1 cut(s) 1575
PpsI GAGTC 4 cut(s) 189, 200, 1076, 1367
PpuMI RGGWCCY 1 cut(s) 1501
PshAI GACNNNNGTC 1 cut(s) 1050
Psp5II RGGWCCY 1 cut(s) 1501
Psp6I CCWGG 3 cut(s) 553, 946, 1575
PspGI CCWGG 3 cut(s) 553, 946, 1575
PspN4I GGNNCC 3 cut(s) 336, 759, 1573
PspPI GGNCC 1 cut(s) 1501
PspPPI RGGWCCY 1 cut(s) 1501
PstNI CAGNNNCTG 1 cut(s) 1424
PsuI RGATCY 2 cut(s) 862, 937
RsaI GTAC 8 cut(s) 218, 414, 501, 551, 635, 814, 1177, 1309
RsaNI GTAC 8 cut(s) 217, 413, 500, 550, 634, 813, 1176, 1308
SapI GCTCTTC 1 cut(s) 139
SaqAI TTAA 5 cut(s) 396, 1223, 1437, 1484, 1548
SatI GCNGC 9 cut(s) 223, 321, 480, 483, 566, 1097, 1235, 1511, 1538
Sau3AI GATC 6 cut(s) 248, 373, 520, 862, 937, 1003
Sau96I GGNCC 1 cut(s) 1501
ScaI AGTACT 1 cut(s) 414
SchI GAGTC 4 cut(s) 189, 200, 1076, 1368
ScrFI CCNGG 4 cut(s) 200, 555, 948, 1577
SfaNI GCATC 1 cut(s) 494
SfoI GGCGCC 1 cut(s) 1573
SinI GGWCC 1 cut(s) 1501
SmlI CTYRAG 2 cut(s) 680, 1496
SmoI CTYRAG 2 cut(s) 680, 1496
SsiI CCGC 5 cut(s) 4, 139, 220, 223, 941
SspDI GGCGCC 1 cut(s) 1571
SspI AATATT 1 cut(s) 1302
SspMI CTAG 5 cut(s) 578, 1001, 1335, 1370, 1505
StyD4I CCNGG 4 cut(s) 198, 553, 946, 1575
StyI CCWWGG 1 cut(s) 919
TaaI ACNGT 5 cut(s) 22, 1052, 1168, 1175, 1568
TaiI ACGT 1 cut(s) 452
TaqI TCGA 3 cut(s) 247, 1026, 1080
TatI WGTACW 4 cut(s) 412, 633, 812, 1175
TauI GCSGC 1 cut(s) 225
TfiI GAWTC 4 cut(s) 1274, 1349, 1414, 1421
Tru1I TTAA 5 cut(s) 396, 1223, 1437, 1484, 1548
Tru9I TTAA 5 cut(s) 396, 1223, 1437, 1484, 1548
TscAI CASTG 3 cut(s) 25, 465, 873
TseFI GTSAC 2 cut(s) 389, 456
TseI GCWGC 8 cut(s) 320, 479, 482, 565, 1096, 1234, 1510, 1537
Tsp45I GTSAC 2 cut(s) 389, 456
TspDTI ATGAA 6 cut(s) 230, 480, 587, 589, 1254, 1572
TspGWI ACGGA 1 cut(s) 948
TspRI CASTG 3 cut(s) 25, 465, 873
Van91I CCANNNNNTGG 1 cut(s) 618
VpaK11BI GGWCC 1 cut(s) 1501
XapI RAATTY 4 cut(s) 102, 261, 806, 1034
XbaI TCTAGA 1 cut(s) 1000
XcmI CCANNNNNNNNNTGG 1 cut(s) 886
XmiI GTMKAC 1 cut(s) 837
XspI CTAG 5 cut(s) 578, 1001, 1335, 1370, 1505
ZrmI AGTACT 1 cut(s) 414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.