RchiOBHm_Chr6g0293011
ERF Family

Mitochondrial transcription termination factor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000115
Physical Location & Seq
Forward (+)
55834116 .. 55838077
3962 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26292

Sequence Viewer

Length: 2535 bp
ATGTATAGCTCACTCGACTGTCATGCTGTTTCGACATTTCACCTCAAAGCAACACTGAGCAATAGCGTGGTGAATCAAAAGGGCAGAGAGAGAGAGAGAGAGTATGGCAGCCAACTCCATTTACATTTGGCATCCCCAATATTGTCTCGTTTGTTTTGCAGAAATTGGCATGCAGTTGCTGGTTCTCGTTTTCGTCTTCAAAATCAGTGGTTTTGTACAACAAGACTGACCAGCAGCAGCAGCAGCTCCGATGATTTTACAGTCTCCTACCTGGTTAACTCATGTGGGCTTTCCCCAGAAGCCGCCGTTGTAGCATCCCACAAGGTAAAGCTTCTATCTTTCGAGAAACCAGACTCCGTTTTAGCGCTGCTGAAACACTATGAATTCTCGGAAACCCAGATATCAACTCTTGTGCGGAGACACCCACATGTTCTGGTGGCAAATGCCCAGGAAACCCTTTTGCCAAAGCTCGAGTTTTTGTGCTCCATAGGAATGTCAAGGCTCGACCTTGCAAGAACACTGGCAAACAACCCAATTGTTTTGATGCGGAGTTTGGAATACCAAATTAGACCCTCTTATACCTTCTTCAAAAAAGTGGTGCTCTCTGATGTGAAGGTCGTGGATATTTGGAAGCGCAACTCATGGATTTTCAGGGGAAATCTGTTCAAGAATGTGATACCCAATATTGAGCTTGTGAGAGAATTGGGCATGCCCCAGTCCTGTATTGCCCTGTTGCTAACATATTATGCTAATATTGTGATGAAAAAGCCTGATTTCTTCGGTCAACTTGTGGGTGAGGTCAAAGAAATGGGATTTGACCCTCAAAGGTCGAGCTTTGTGCAGGCCATGCATGCATTATCTGGAAAAGAGACGACATGGAAACTCTGTCAAGAGGTTTATAGGAGTTGGGGTTGGTCTGACGAGGATATTCTTGATGCCTTCAGGTCGCATCCGCTGTGTATGATGAAGTCAGGGAAGAAAATAATGGAAACAATGGATTTCTTAGTGAACAAGATGGGTTGGCAGTCACAGAAGATTGCAAGGTCTTCCAGGGTTTTGGGTTACAGCTTGGAGAAGAGAATCATCCCAAGGTGTTCCGTTGTTAGAATTTTGTTGTTGAAAGGATTGATGAAAGAGGAAGAGTTGAATATGAATACTATTATTACTACTTCAGAGAAATACTTCCTGACTAAGTTTGTGAGCAGATATCTCAACCAAGTACCTCAATTGTTGAATGTGTACCAAGGGAAACTGGATTTTCAGGATCTGAGTCTGAGCAGAGAAGGCGCTGGAAAACAAGGTGGTCCCGAAGCCGCCGGACGACGTGGTGGGAGTTCCGAAGAATGGAGTGGAACTGGGAGTGAAGAAGGACGGGGTCGTCGACGGAGTGCCGAAGGCTGCAGCCTGGAAAATGGGCACCCAGTCGGGGGAATGGCTTCGCATTTTGGTCCTCAAAAGCAGTTGTTTTGTACAAGACTCACCGGCAGGTCCGAAATCCCAGCCGGCCAAGATGATTCTACAGTCTCTTACCTGGTTAACTCGTGTGGGTTGTCCCCAGAATCCGCTACTCTAGTATCCCACACGGTAAAGCTTCAATCTTTAGAGAAATCAGACTCCGTTTTAGCGCTTTTGAAACACTATGAATTCTCAGAGGCCCAGATTTCAAAGGTTGTGCAGAGACTCCCACATATTCTCTTGGCCGATGTGGAGCAAACCCTTTTGCCAAACCTCGAGTTTTACTGCTCCATAGGAATGTCAAGGCTCCACCTTGCAAGAACACTGAGCTACAACCCATGGCTCATGAGTCTAAGCTTGAAAAACGATATTGTACCAACTTATAGCTTCTTCAAGAGCGTGGTGCTCTCTGATGTCAAAGTGATCCATATTTTGAAGCACAAGTCCTGGATTTTCAGGGAAAATTTATCCAAGAATCTGATACCCAATATTGAGCTTGTGAGAGAATTGGGCATTCCTCAGTCCTGTATTGCCCTCTTGCTGACTAGTTATACTGATGTAGTGATGAAAAAGCCTGAATTGTTCAGTCAACTTGTGCATCAAGTCACAGAAATGGGATTTGACCCTCAAAATTTGAGCTTTGTGCAGGCCATACACGCATTATATGGGAAAGAGACGACATGGAAACGATGTCAAGAGGTTTATAGGAGGTGGGGTTGGTCTGAGAATCATATACGTTCTGCTTTCAGGGTGTCTCCACTGTGTATGGTTATGTCAGAGAAGAAACTAATGGCAACAATGGATTTCTTAGTGAACAAGATGGGGTGGCAGTCACAAACAATTGCGAAATATCCCCATGTTTTGAGTTACAGCTTGCAGAAGAGATTCATCCCGAGGTTTTCAGTTGTTCGAGTTTTGTTTTTGAAAGGATTGATAGAAGAGGAGAACTTGAGTTTGGCTACTGGGATTTCAAAGTCAGAGAAGTACTTCTTGGATAGGTTTGTGAACAGATATCTCAGCCAAGTACCTCAATTGTTGGATGTGTACCGTGGAAAAGTAGATATCCAGGATGTGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

844

Amino Acids

96.18

Weight (kDa)

9.3

Isoelectric Point (pI)

51.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 121 - 273 2.6e-19 mTERF
mTERF PF02536 290 - 395 9.8e-14 mTERF
mTERF PF02536 541 - 697 1.2e-21 mTERF
mTERF PF02536 710 - 815 1.6e-14 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1377
Acc36I ACCTGC 1 cut(s) 1476
AccB1I GGYRCC 1 cut(s) 1416
AccI GTMKAC 1 cut(s) 1381
AciI CCGC 6 cut(s) 303, 415, 547, 953, 1314, 1563
AclWI GGATC 2 cut(s) 1272, 1873
AcoI YGGCCR 2 cut(s) 1504, 1698
AcsI RAATTY 5 cut(s) 383, 1107, 1643, 1918, 2086
AcuI CTGAAG 2 cut(s) 925, 1155
AfaI GTAC 8 cut(s) 217, 1221, 1241, 1471, 1830, 2441, 2481, 2501
AfeI AGCGCT 2 cut(s) 366, 1626
AfiI CCNNNNNNNGG 3 cut(s) 1344, 1426, 1427
AflIII ACRYGT 1 cut(s) 427
AhlI ACTAGT 1 cut(s) 2000
AjiI CACGTC 1 cut(s) 1325
AjnI CCWGG 7 cut(s) 270, 447, 1049, 1404, 1530, 1901, 2520
AjuI GAANNNNNNNTTGG 4 cut(s) 2393, 2425, 2429, 2461
Alw21I GWGCWC 3 cut(s) 485, 603, 1863
Alw26I GTCTC 8 cut(s) 150, 268, 412, 863, 1528, 1672, 2123, 2214
AlwI GGATC 2 cut(s) 1272, 1873
AlwNI CAGNNNCTG 2 cut(s) 179, 1267
Ama87I CYCGRG 3 cut(s) 470, 1730, 2347
Aor51HI AGCGCT 2 cut(s) 366, 1626
AoxI GGCC 5 cut(s) 843, 1504, 1653, 1698, 2103
ApeKI GCWGC 8 cut(s) 108, 234, 237, 240, 243, 367, 1398, 1401
ApoI RAATTY 5 cut(s) 383, 1107, 1643, 1918, 2086
Asp700I GAANNNNTTC 4 cut(s) 1181, 1435, 2339, 2441
AspLEI GCGC 4 cut(s) 367, 636, 1289, 1627
AspS9I GGNCC 4 cut(s) 1304, 1448, 1488, 1654
AsuHPI GGTGA 4 cut(s) 32, 82, 806, 1471
AvaI CYCGRG 3 cut(s) 470, 1730, 2347
AvaII GGWCC 3 cut(s) 1304, 1448, 1488
BaeGI GKGCMC 1 cut(s) 1419
BaeI ACNNNNGTAYC 2 cut(s) 1557, 1590
BanI GGYRCC 1 cut(s) 1416
BauI CACGAG 1 cut(s) 1540
BbsI GAAGAC 2 cut(s) 188, 1038
Bbv12I GWGCWC 3 cut(s) 485, 603, 1863
BbvI GCAGC 8 cut(s) 120, 246, 249, 252, 255, 354, 1385, 1413
BccI CCATC 2 cut(s) 1009, 2269
BceAI ACGGC 1 cut(s) 290
BcgI CGANNNNNNTGC 4 cut(s) 5, 39, 820, 854
BciT130I CCWGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
BciVI GTATCC 1 cut(s) 1585
BcoDI GTCTC 8 cut(s) 150, 268, 412, 863, 1528, 1672, 2123, 2214
BcuI ACTAGT 1 cut(s) 2000
BfaI CTAG 2 cut(s) 1571, 2001
BfmI CTRYAG 2 cut(s) 1399, 1518
BfoI RGCGCY 3 cut(s) 368, 1290, 1628
BfuAI ACCTGC 1 cut(s) 1476
BfuI GTATCC 1 cut(s) 1585
BmcAI AGTACT 1 cut(s) 2441
Bme1390I CCNGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
Bme18I GGWCC 3 cut(s) 1304, 1448, 1488
BmeT110I CYCGRG 3 cut(s) 470, 1730, 2347
BmgBI CACGTC 1 cut(s) 1325
BmgT120I GGNCC 4 cut(s) 1304, 1448, 1488, 1654
BmiI GGNNCC 3 cut(s) 1306, 1418, 1763
BmrFI CCNGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
BmrI ACTGGG 4 cut(s) 709, 1365, 1415, 2427
BmsI GCATC 6 cut(s) 140, 323, 534, 925, 958, 2062
BmuI ACTGGG 4 cut(s) 709, 1365, 1415, 2427
BpiI GAAGAC 2 cut(s) 188, 1038
BpuEI CTTGAG 1 cut(s) 2425
BsaJI CCNNGG 7 cut(s) 447, 1050, 1088, 1243, 1793, 2348, 2503
BsaXI ACNNNNNCTCC 4 cut(s) 895, 925, 2155, 2185
Bsc4I CCNNNNNNNGG 3 cut(s) 1344, 1426, 1427
Bse118I RCCGGY 2 cut(s) 1481, 1502
Bse1I ACTGG 6 cut(s) 525, 715, 1257, 1360, 1421, 2422
BseBI CCWGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
BseDI CCNNGG 7 cut(s) 447, 1050, 1088, 1243, 1793, 2348, 2503
BseGI GGATG 7 cut(s) 131, 314, 949, 1083, 2343, 2500, 2530
BseLI CCNNNNNNNGG 3 cut(s) 1344, 1426, 1427
BseMII CTCAG 8 cut(s) 47, 1259, 1265, 1662, 1772, 1988, 2169, 2485
BseNI ACTGG 6 cut(s) 525, 715, 1257, 1360, 1421, 2422
BseRI GAGGAG 1 cut(s) 2411
BseSI GKGCMC 1 cut(s) 1419
BseXI GCAGC 8 cut(s) 120, 246, 249, 252, 255, 354, 1385, 1413
BseYI CCCAGC 1 cut(s) 1498
BsgI GTGCAG 3 cut(s) 860, 1694, 2120
BshFI GGCC 5 cut(s) 845, 1506, 1655, 1700, 2105
BshNI GGYRCC 1 cut(s) 1416
BsiHKAI GWGCWC 3 cut(s) 485, 603, 1863
BsiHKCI CYCGRG 3 cut(s) 470, 1730, 2347
BsiSI CCGG 3 cut(s) 1317, 1482, 1503
BslFI GGGAC 2 cut(s) 1290, 1537
BslI CCNNNNNNNGG 3 cut(s) 1344, 1426, 1427
BsmAI GTCTC 8 cut(s) 150, 268, 412, 863, 1528, 1672, 2123, 2214
BsmBI CGTCTC 2 cut(s) 863, 2123
BsmFI GGGAC 2 cut(s) 1290, 1537
BsmI GAATGC 1 cut(s) 1968
BsnI GGCC 5 cut(s) 845, 1506, 1655, 1700, 2105
BsoBI CYCGRG 3 cut(s) 470, 1730, 2347
Bsp1286I GDGCHC 4 cut(s) 485, 603, 1419, 1863
Bsp1407I TGTACA 2 cut(s) 215, 1469
Bsp143I GATC 2 cut(s) 1264, 1878
Bsp19I CCATGG 1 cut(s) 1793
BspACI CCGC 6 cut(s) 303, 415, 547, 953, 1314, 1563
BspANI GGCC 5 cut(s) 845, 1506, 1655, 1700, 2105
BspCNI CTCAG 8 cut(s) 48, 1260, 1266, 1661, 1773, 1987, 2170, 2484
BspHI TCATGA 1 cut(s) 1800
BspLI GGNNCC 3 cut(s) 1306, 1418, 1763
BspMAI CTGCAG 1 cut(s) 1403
BspMI ACCTGC 1 cut(s) 1476
BspPI GGATC 2 cut(s) 1272, 1873
BspT107I GGYRCC 1 cut(s) 1416
BsrFI RCCGGY 2 cut(s) 1481, 1502
BsrGI TGTACA 2 cut(s) 215, 1469
BsrI ACTGG 6 cut(s) 525, 715, 1257, 1360, 1421, 2422
BssAI RCCGGY 2 cut(s) 1481, 1502
BssECI CCNNGG 7 cut(s) 447, 1050, 1088, 1243, 1793, 2348, 2503
BssMI GATC 2 cut(s) 1264, 1878
BssSI CACGAG 1 cut(s) 1540
BssT1I CCWWGG 3 cut(s) 1088, 1243, 1793
Bst2BI CACGAG 1 cut(s) 1540
Bst2UI CCWGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
Bst4CI ACNGT 6 cut(s) 20, 262, 1522, 1585, 2217, 2504
Bst6I CTCTTC 4 cut(s) 1070, 1134, 2330, 2388
BstAPI GCANNNNNTGC 1 cut(s) 847
BstAUI TGTACA 2 cut(s) 215, 1469
BstC8I GCNNGC 7 cut(s) 171, 710, 843, 852, 1504, 2103, 2330
BstDSI CCRYGG 2 cut(s) 1793, 2503
BstF5I GGATG 7 cut(s) 131, 314, 949, 1083, 2343, 2500, 2530
BstH2I RGCGCY 3 cut(s) 368, 1290, 1628
BstHHI GCGC 4 cut(s) 367, 636, 1289, 1627
BstKTI GATC 2 cut(s) 1267, 1881
BstMAI GTCTC 8 cut(s) 150, 268, 412, 863, 1528, 1672, 2123, 2214
BstMBI GATC 2 cut(s) 1264, 1878
BstMWI GCNNNNNNNGC 7 cut(s) 240, 243, 311, 847, 851, 1284, 2111
BstNI CCWGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
BstNSI RCATGY 4 cut(s) 173, 431, 712, 854
BstSCI CCNGG 7 cut(s) 270, 447, 1049, 1404, 1530, 1901, 2520
BstSFI CTRYAG 2 cut(s) 1399, 1518
BstSLI GKGCMC 1 cut(s) 1419
BstV1I GCAGC 8 cut(s) 120, 246, 249, 252, 255, 354, 1385, 1413
BstV2I GAAGAC 2 cut(s) 188, 1038
BstX2I RGATCY 1 cut(s) 1264
BstXI CCANNNNNNTGG 1 cut(s) 1057
BstYI RGATCY 1 cut(s) 1264
BsuI GTATCC 1 cut(s) 1585
BsuRI GGCC 5 cut(s) 845, 1506, 1655, 1700, 2105
BtgI CCRYGG 2 cut(s) 1793, 2503
BtrI CACGTC 1 cut(s) 1325
BtsCI GGATG 7 cut(s) 131, 314, 949, 1083, 2343, 2500, 2530
BtsIMutI CAGTG 5 cut(s) 53, 212, 518, 1778, 2213
BveI ACCTGC 1 cut(s) 1476
Cac8I GCNNGC 7 cut(s) 171, 710, 843, 852, 1504, 2103, 2330
CaiI CAGNNNCTG 2 cut(s) 179, 1267
CciI TCATGA 1 cut(s) 1800
CfoI GCGC 4 cut(s) 367, 636, 1289, 1627
Cfr10I RCCGGY 2 cut(s) 1481, 1502
Cfr13I GGNCC 4 cut(s) 1304, 1448, 1488, 1654
CsiI ACCWGGT 2 cut(s) 270, 1530
Csp6I GTAC 8 cut(s) 216, 1220, 1240, 1470, 1829, 2440, 2480, 2500
CspCI CAANNNNNGTGG 2 cut(s) 188, 223
CviQI GTAC 8 cut(s) 216, 1220, 1240, 1470, 1829, 2440, 2480, 2500
DpnI GATC 2 cut(s) 1266, 1880
DpnII GATC 2 cut(s) 1264, 1878
DrdI GACNNNNNNGTC 1 cut(s) 1377
DseDI GACNNNNNNGTC 1 cut(s) 1377
EaeI YGGCCR 2 cut(s) 1504, 1698
Eam1104I CTCTTC 4 cut(s) 1070, 1134, 2330, 2388
EarI CTCTTC 4 cut(s) 1070, 1134, 2330, 2388
Eco130I CCWWGG 3 cut(s) 1088, 1243, 1793
Eco32I GATATC 4 cut(s) 402, 1208, 2468, 2518
Eco47I GGWCC 3 cut(s) 1304, 1448, 1488
Eco47III AGCGCT 2 cut(s) 366, 1626
Eco57I CTGAAG 2 cut(s) 925, 1155
Eco88I CYCGRG 3 cut(s) 470, 1730, 2347
EcoRI GAATTC 2 cut(s) 383, 1643
EcoRII CCWGG 7 cut(s) 270, 447, 1049, 1404, 1530, 1901, 2520
EcoRV GATATC 4 cut(s) 402, 1208, 2468, 2518
EcoT14I CCWWGG 3 cut(s) 1088, 1243, 1793
EcoT22I ATGCAT 2 cut(s) 852, 856
ErhI CCWWGG 3 cut(s) 1088, 1243, 1793
Esp3I CGTCTC 2 cut(s) 863, 2123
FalI AAGNNNNNCTT 2 cut(s) 2429, 2461
FaqI GGGAC 2 cut(s) 1290, 1537
FblI GTMKAC 1 cut(s) 1381
FokI GGATG 6 cut(s) 118, 301, 936, 1070, 2330, 2507
FspBI CTAG 2 cut(s) 1571, 2001
GlaI GCGC 4 cut(s) 366, 635, 1288, 1626
GsaI CCCAGC 1 cut(s) 1502
HaeII RGCGCY 3 cut(s) 368, 1290, 1628
HaeIII GGCC 5 cut(s) 845, 1506, 1655, 1700, 2105
HapII CCGG 3 cut(s) 1317, 1482, 1503
HhaI GCGC 4 cut(s) 367, 636, 1289, 1627
Hin6I GCGC 4 cut(s) 365, 634, 1287, 1625
HinP1I GCGC 4 cut(s) 365, 634, 1287, 1625
HincII GTYRAC 5 cut(s) 277, 785, 1382, 1537, 2045
HindII GTYRAC 5 cut(s) 277, 785, 1382, 1537, 2045
HindIII AAGCTT 3 cut(s) 329, 1589, 1810
HpaI GTTAAC 2 cut(s) 277, 1537
HpaII CCGG 3 cut(s) 1317, 1482, 1503
HphI GGTGA 4 cut(s) 32, 82, 806, 1471
Hpy99I CGWCG 3 cut(s) 1326, 1383, 1386
HpyAV CCTTC 6 cut(s) 592, 607, 949, 1277, 1361, 1388
HpyCH4III ACNGT 6 cut(s) 20, 262, 1522, 1585, 2217, 2504
HpyCH4IV ACGT 2 cut(s) 1324, 2191
HpyF10VI GCNNNNNNNGC 7 cut(s) 240, 243, 311, 847, 851, 1284, 2111
HpySE526I ACGT 2 cut(s) 1324, 2191
HspAI GCGC 4 cut(s) 365, 634, 1287, 1625
KroI GCCGGC 1 cut(s) 1502
KroNI GCCGGC 1 cut(s) 1504
KspAI GTTAAC 2 cut(s) 277, 1537
Kzo9I GATC 2 cut(s) 1264, 1878
LmnI GCTCC 5 cut(s) 251, 488, 1708, 1748, 1767
Lsp1109I GCAGC 8 cut(s) 120, 246, 249, 252, 255, 354, 1385, 1413
LweI GCATC 6 cut(s) 140, 323, 534, 925, 958, 2062
MabI ACCWGGT 2 cut(s) 270, 1530
MaeI CTAG 2 cut(s) 1571, 2001
MaeII ACGT 2 cut(s) 1324, 2191
MaeIII GTNAC 5 cut(s) 1026, 1061, 2059, 2286, 2321
MalI GATC 2 cut(s) 1266, 1880
MboI GATC 2 cut(s) 1264, 1878
MfeI CAATTG 4 cut(s) 534, 1226, 2295, 2486
MflI RGATCY 1 cut(s) 1264
MhlI GDGCHC 4 cut(s) 485, 603, 1419, 1863
MlyI GAGTC 6 cut(s) 347, 1279, 1470, 1607, 1674, 1813
MmeI TCCRAC 1 cut(s) 2472
Mph1103I ATGCAT 2 cut(s) 852, 856
MroNI GCCGGC 1 cut(s) 1502
MroXI GAANNNNTTC 4 cut(s) 1181, 1435, 2339, 2441
MseI TTAA 2 cut(s) 276, 1536
MslI CAYNNNNRTG 4 cut(s) 426, 491, 1751, 2066
MspA1I CMGCKG 1 cut(s) 955
MspI CCGG 3 cut(s) 1317, 1482, 1503
MspR9I CCNGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
MunI CAATTG 4 cut(s) 534, 1226, 2295, 2486
Mva1269I GAATGC 1 cut(s) 1968
MvaI CCWGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
MwoI GCNNNNNNNGC 7 cut(s) 240, 243, 311, 847, 851, 1284, 2111
NaeI GCCGGC 1 cut(s) 1504
NcoI CCATGG 1 cut(s) 1793
NdeII GATC 2 cut(s) 1264, 1878
NgoMIV GCCGGC 1 cut(s) 1502
NlaIV GGNNCC 3 cut(s) 1306, 1418, 1763
NmuCI GTSAC 3 cut(s) 1026, 2059, 2286
NsiI ATGCAT 2 cut(s) 852, 856
NspI RCATGY 4 cut(s) 173, 431, 712, 854
PaeI GCATGC 3 cut(s) 173, 712, 854
PaeR7I CTCGAG 2 cut(s) 470, 1730
PagI TCATGA 1 cut(s) 1800
PciI ACATGT 1 cut(s) 427
PcsI WCGNNNNNNNCGW 1 cut(s) 1378
PctI GAATGC 1 cut(s) 1968
PdiI GCCGGC 1 cut(s) 1504
PdmI GAANNNNTTC 4 cut(s) 1181, 1435, 2339, 2441
PfeI GAWTC 7 cut(s) 73, 1080, 1514, 1559, 1930, 2182, 2340
PflFI GACNNNGTC 1 cut(s) 1374
PfoI TCCNGGA 2 cut(s) 1901, 2520
PleI GAGTC 6 cut(s) 347, 1278, 1470, 1607, 1674, 1812
PpsI GAGTC 6 cut(s) 347, 1278, 1470, 1607, 1674, 1812
PscI ACATGT 1 cut(s) 427
Psp6I CCWGG 7 cut(s) 270, 447, 1049, 1404, 1530, 1901, 2520
PspFI CCCAGC 1 cut(s) 1498
PspGI CCWGG 7 cut(s) 270, 447, 1049, 1404, 1530, 1901, 2520
PspN4I GGNNCC 3 cut(s) 1306, 1418, 1763
PspPI GGNCC 4 cut(s) 1304, 1448, 1488, 1654
PspXI VCTCGAGB 2 cut(s) 470, 1730
PstI CTGCAG 1 cut(s) 1403
PstNI CAGNNNCTG 2 cut(s) 179, 1267
PsuI RGATCY 1 cut(s) 1264
PsyI GACNNNGTC 1 cut(s) 1374
RsaI GTAC 8 cut(s) 217, 1221, 1241, 1471, 1830, 2441, 2481, 2501
RsaNI GTAC 8 cut(s) 216, 1220, 1240, 1470, 1829, 2440, 2480, 2500
RseI CAYNNNNRTG 4 cut(s) 426, 491, 1751, 2066
SalI GTCGAC 1 cut(s) 1380
SaqAI TTAA 2 cut(s) 276, 1536
Sau3AI GATC 2 cut(s) 1264, 1878
Sau96I GGNCC 4 cut(s) 1304, 1448, 1488, 1654
ScaI AGTACT 1 cut(s) 2441
SchI GAGTC 6 cut(s) 347, 1279, 1470, 1607, 1674, 1813
ScrFI CCNGG 7 cut(s) 272, 449, 1051, 1406, 1532, 1903, 2522
SduI GDGCHC 4 cut(s) 485, 603, 1419, 1863
SexAI ACCWGGT 2 cut(s) 270, 1530
SfaNI GCATC 6 cut(s) 140, 323, 534, 925, 958, 2062
SfcI CTRYAG 2 cut(s) 1399, 1518
Sfr274I CTCGAG 2 cut(s) 470, 1730
SgrDI CGTCGACG 1 cut(s) 1380
SinI GGWCC 3 cut(s) 1304, 1448, 1488
SlaI CTCGAG 2 cut(s) 470, 1730
SmiMI CAYNNNNRTG 4 cut(s) 426, 491, 1751, 2066
SmlI CTYRAG 3 cut(s) 470, 1730, 2404
SmoI CTYRAG 3 cut(s) 470, 1730, 2404
SpeI ACTAGT 1 cut(s) 2000
SphI GCATGC 3 cut(s) 173, 712, 854
SsiI CCGC 6 cut(s) 303, 415, 547, 953, 1314, 1563
SspI AATATT 4 cut(s) 141, 685, 754, 1945
SspMI CTAG 2 cut(s) 1571, 2001
StyD4I CCNGG 7 cut(s) 270, 447, 1049, 1404, 1530, 1901, 2520
StyI CCWWGG 3 cut(s) 1088, 1243, 1793
TaaI ACNGT 6 cut(s) 20, 262, 1522, 1585, 2217, 2504
TaiI ACGT 2 cut(s) 1327, 2194
TaqI TCGA 9 cut(s) 15, 32, 342, 471, 504, 830, 1381, 1731, 2365
TaqII GACCGA 1 cut(s) 770
TatI WGTACW 3 cut(s) 215, 1469, 2439
TauI GCSGC 2 cut(s) 305, 1316
TfiI GAWTC 7 cut(s) 73, 1080, 1514, 1559, 1930, 2182, 2340
Tru1I TTAA 2 cut(s) 276, 1536
Tru9I TTAA 2 cut(s) 276, 1536
TscAI CASTG 5 cut(s) 60, 212, 525, 1785, 2220
TseFI GTSAC 3 cut(s) 1026, 2059, 2286
TseI GCWGC 8 cut(s) 108, 234, 237, 240, 243, 367, 1398, 1401
Tsp45I GTSAC 3 cut(s) 1026, 2059, 2286
TspDTI ATGAA 8 cut(s) 396, 776, 980, 1145, 1166, 1656, 2036, 2332
TspGWI ACGGA 4 cut(s) 346, 1087, 1399, 1606
TspRI CASTG 5 cut(s) 60, 212, 525, 1785, 2220
Tth111I GACNNNGTC 1 cut(s) 1374
VpaK11BI GGWCC 3 cut(s) 1304, 1448, 1488
XapI RAATTY 5 cut(s) 383, 1107, 1643, 1918, 2086
XceI RCATGY 4 cut(s) 173, 431, 712, 854
XhoI CTCGAG 2 cut(s) 470, 1730
XmiI GTMKAC 1 cut(s) 1381
XmnI GAANNNNTTC 4 cut(s) 1181, 1435, 2339, 2441
XspI CTAG 2 cut(s) 1571, 2001
ZrmI AGTACT 1 cut(s) 2441
Zsp2I ATGCAT 2 cut(s) 852, 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.