MD02G1285700.v1.1
ERF Family

termination of mitochondrial transcription

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000115
Physical Location & Seq
Forward (+)
34271482 .. 34273813
2332 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1285700.v1.1.491

Sequence Viewer

Length: 1194 bp
ATGGTACTGTTCTCCAATTTCAAGCACCTCAGGTTGGTTTCGTCACAATTTTTTTATACATTTGCATCCAAACCCAAAAGATTTGTCTCTTTCGATCCCAACCCCTCAAACTTTTCTCTTCCAAATCAGTTGCTTTACAGACCCTTCGCATCAAAAATCTCAGAAACCCAACACCATTTCACAGTCAATTACCTCATAAACTCATGTGGGTTGTCCCCAGAAGGTGCAGTTTCAGCATTCAAGATGTTCAAGTTGCGATCTTCAGAAAATGCAGACTCTGTTTTGGCACTTTTGAGAAACCATGGACTCTCTGAGACCCAAATCTCAAAGGTTTTCAGGTCAGCCCCAAAAATTCTTCAACTCGATCCTCAGAAAATCCTTCTGCCCAAGATTGAGTTTTTCAGCTCTCTGGGAATTTCAAGGGAGGATCTTGCAAAAGCTGTGGCTCGTAAACCAAACCTCTTGGTAATGAGCTTGCAAAACCGGATTATGCCCACTTATGATTTTCTCAGGAGTATGCTGCTTTCTGAGAAAAATGTTGTTACAGTGATCAAGCGCTCCTCGTGGATTTTTGTCGAAGGCCACCGCAAGCATTTGGTGCGAAATGTCGGGCTTTTGAGGGAACTAGGTATGCCCCAAACATGTATTGCTTTCTTGCTAACTCACTGCAGTTCTGTTTTGATGCTAAATCCTGAAAAACTTGGTAAACTTGTGGGGGAAGTTAAGGAAATGGGAATCAATGTGGAAAATACAACCTTCGCAAGTGCACTAGATACTTTGTGTGGTAACAATAAGTTGGTGTGGAATAGAAGTCGCGAAGCTTATAAGAAATGGGGTTGGTCTGAGGACGATGTTCTTTCTGCTTTTAAGCGGTGCCCAACTTGTATGATTATGTCGGAGCAGAAGCTAATGCAATCGATGGATTTTTTAGTGAACAAGATAAGATGGTCGTCAGGAATGATTGCCAAGTACCCTGTGGTCATGAACTTGAGTTTGGAGAGGAGACTTATCCCGAGGTGTTCGGTTGTTAAAGTTTTGTTGTTGAAAGGTTTGATAAATGAGAACTTCAATTTGGGTTCAGTGGTGATACCTGCGGAGAAACAGTTCTTGGAGACGTTTGTGAACAGATATCTTGGCAAAGTACCTCAATTGTTGAGCGTGTATCAAGGGAAGGTCGATATCCAGGATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

398

Amino Acids

45.18

Weight (kDa)

9.76

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 95 - 249 3.2e-23 mTERF
mTERF PF02536 271 - 369 3.7e-16 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 825
Acc36I ACCTGC 1 cut(s) 1099
AccB1I GGYRCC 1 cut(s) 873
AccII CGCG 1 cut(s) 816
AciI CCGC 3 cut(s) 586, 871, 1094
AclWI GGATC 3 cut(s) 89, 359, 435
AcsI RAATTY 2 cut(s) 351, 414
AcuI CTGAAG 1 cut(s) 246
AfaI GTAC 3 cut(s) 6, 971, 1143
AfeI AGCGCT 1 cut(s) 557
AfiI CCNNNNNNNGG 1 cut(s) 34
AflIII ACRYGT 1 cut(s) 641
AgsI TTSAA 7 cut(s) 22, 241, 250, 359, 420, 1045, 1069
AjnI CCWGG 1 cut(s) 1182
AjuI GAANNNNNNNTTGG 6 cut(s) 977, 1009, 1055, 1087, 1091, 1123
AloI GAACNNNNNNTCC 2 cut(s) 1088, 1120
AluBI AGCT 5 cut(s) 405, 440, 474, 821, 907
AluI AGCT 5 cut(s) 405, 440, 474, 821, 907
Alw21I GWGCWC 1 cut(s) 769
Alw26I GTCTC 4 cut(s) 91, 308, 997, 1106
Alw44I GTGCAC 1 cut(s) 765
AlwI GGATC 3 cut(s) 89, 359, 435
AlwNI CAGNNNCTG 1 cut(s) 278
Ama87I CYCGRG 1 cut(s) 1012
Aor51HI AGCGCT 1 cut(s) 557
AoxI GGCC 1 cut(s) 580
ApaLI GTGCAC 1 cut(s) 765
ApeKI GCWGC 1 cut(s) 520
ApoI RAATTY 2 cut(s) 351, 414
ArsI GACNNNNNNTTYG 2 cut(s) 69, 101
Asp700I GAANNNNTTC 1 cut(s) 1103
AspLEI GCGC 1 cut(s) 558
AsuHPI GGTGA 1 cut(s) 1096
AvaI CYCGRG 1 cut(s) 1012
AxyI CCTNAGG 1 cut(s) 29
BaeGI GKGCMC 2 cut(s) 769, 878
BanI GGYRCC 1 cut(s) 873
BauI CACGAG 1 cut(s) 562
Bbv12I GWGCWC 1 cut(s) 769
BbvI GCAGC 1 cut(s) 507
BccI CCATC 2 cut(s) 913, 939
BciT130I CCWGG 1 cut(s) 1184
BclI TGATCA 1 cut(s) 549
BcoDI GTCTC 4 cut(s) 91, 308, 997, 1106
BfaI CTAG 2 cut(s) 626, 770
BfmI CTRYAG 1 cut(s) 667
BfoI RGCGCY 1 cut(s) 559
BfuAI ACCTGC 1 cut(s) 1099
BisI GCNGC 1 cut(s) 521
BlsI GCNGC 1 cut(s) 522
Bme1390I CCNGG 1 cut(s) 1184
BmeT110I CYCGRG 1 cut(s) 1012
BmiI GGNNCC 1 cut(s) 875
BmrFI CCNGG 1 cut(s) 1184
BmsI GCATC 4 cut(s) 74, 158, 672, 1177
BpuEI CTTGAG 1 cut(s) 1009
Bsa29I ATCGAT 1 cut(s) 917
BsaI GGTCTC 1 cut(s) 308
BsaJI CCNNGG 2 cut(s) 301, 1013
BsaWI WCCGGW 1 cut(s) 483
BsaXI ACNNNNNCTCC 2 cut(s) 1088, 1118
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse21I CCTNAGG 1 cut(s) 29
BseBI CCWGG 1 cut(s) 1184
BseCI ATCGAT 1 cut(s) 917
BseDI CCNNGG 2 cut(s) 301, 1013
BseGI GGATG 2 cut(s) 65, 1192
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMII CTCAG 7 cut(s) 43, 174, 303, 383, 519, 523, 834
BseRI GAGGAG 2 cut(s) 550, 1015
BseSI GKGCMC 2 cut(s) 769, 878
BseXI GCAGC 1 cut(s) 507
BsgI GTGCAG 1 cut(s) 246
Bsh1236I CGCG 1 cut(s) 816
BshFI GGCC 1 cut(s) 582
BshNI GGYRCC 1 cut(s) 873
BshVI ATCGAT 1 cut(s) 917
BsiHKAI GWGCWC 1 cut(s) 769
BsiHKCI CYCGRG 1 cut(s) 1012
BsiSI CCGG 1 cut(s) 484
BslFI GGGAC 1 cut(s) 199
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 4 cut(s) 91, 308, 997, 1106
BsmBI CGTCTC 1 cut(s) 1106
BsmFI GGGAC 1 cut(s) 199
BsmI GAATGC 1 cut(s) 236
BsnI GGCC 1 cut(s) 582
Bso31I GGTCTC 1 cut(s) 308
BsoBI CYCGRG 1 cut(s) 1012
Bsp1286I GDGCHC 2 cut(s) 769, 878
Bsp143I GATC 5 cut(s) 94, 257, 364, 427, 549
Bsp19I CCATGG 1 cut(s) 301
Bsp68I TCGCGA 1 cut(s) 816
BspACI CCGC 3 cut(s) 586, 871, 1094
BspANI GGCC 1 cut(s) 582
BspCNI CTCAG 7 cut(s) 42, 173, 304, 382, 520, 522, 835
BspDI ATCGAT 1 cut(s) 917
BspFNI CGCG 1 cut(s) 816
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 1 cut(s) 875
BspMAI CTGCAG 1 cut(s) 671
BspMI ACCTGC 1 cut(s) 1099
BspPI GGATC 3 cut(s) 89, 359, 435
BspT107I GGYRCC 1 cut(s) 873
BspTNI GGTCTC 1 cut(s) 308
BssECI CCNNGG 2 cut(s) 301, 1013
BssMI GATC 5 cut(s) 94, 257, 364, 427, 549
BssSI CACGAG 1 cut(s) 562
BssT1I CCWWGG 1 cut(s) 301
Bst2BI CACGAG 1 cut(s) 562
Bst2UI CCWGG 1 cut(s) 1184
Bst4CI ACNGT 4 cut(s) 9, 184, 547, 1104
Bst6I CTCTTC 1 cut(s) 123
BstAPI GCANNNNNTGC 1 cut(s) 598
BstC8I GCNNGC 2 cut(s) 476, 590
BstDEI CTNAG 7 cut(s) 29, 160, 312, 369, 509, 528, 843
BstDSI CCRYGG 1 cut(s) 301
BstF5I GGATG 2 cut(s) 65, 1192
BstFNI CGCG 1 cut(s) 816
BstH2I RGCGCY 1 cut(s) 559
BstHHI GCGC 1 cut(s) 558
BstKTI GATC 5 cut(s) 97, 260, 367, 430, 552
BstMAI GTCTC 4 cut(s) 91, 308, 997, 1106
BstMBI GATC 5 cut(s) 94, 257, 364, 427, 549
BstMWI GCNNNNNNNGC 2 cut(s) 233, 598
BstNI CCWGG 1 cut(s) 1184
BstNSI RCATGY 1 cut(s) 645
BstSCI CCNGG 1 cut(s) 1182
BstSFI CTRYAG 1 cut(s) 667
BstSLI GKGCMC 2 cut(s) 769, 878
BstUI CGCG 1 cut(s) 816
BstV1I GCAGC 1 cut(s) 507
BstX2I RGATCY 1 cut(s) 427
BstYI RGATCY 1 cut(s) 427
Bsu15I ATCGAT 1 cut(s) 917
Bsu36I CCTNAGG 1 cut(s) 29
BsuRI GGCC 1 cut(s) 582
BsuTUI ATCGAT 1 cut(s) 917
BtgI CCRYGG 1 cut(s) 301
BtsCI GGATG 2 cut(s) 65, 1192
BtsI GCAGTG 1 cut(s) 664
BtsIMutI CAGTG 3 cut(s) 552, 664, 1086
BtuMI TCGCGA 1 cut(s) 816
BveI ACCTGC 1 cut(s) 1099
Cac8I GCNNGC 2 cut(s) 476, 590
CaiI CAGNNNCTG 1 cut(s) 278
CciI TCATGA 1 cut(s) 981
CfoI GCGC 1 cut(s) 558
ClaI ATCGAT 1 cut(s) 917
Csp6I GTAC 3 cut(s) 5, 970, 1142
CspCI CAANNNNNGTGG 2 cut(s) 423, 458
CviAII CATG 4 cut(s) 204, 302, 642, 982
CviJI RGCY 9 cut(s) 344, 405, 440, 446, 474, 582, 613, 821, 907
CviKI_1 RGCY 9 cut(s) 344, 405, 440, 446, 474, 582, 613, 821, 907
CviQI GTAC 3 cut(s) 5, 970, 1142
DdeI CTNAG 7 cut(s) 29, 160, 312, 369, 509, 528, 843
DpnI GATC 5 cut(s) 96, 259, 366, 429, 551
DpnII GATC 5 cut(s) 94, 257, 364, 427, 549
Eam1104I CTCTTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 123
Eco130I CCWWGG 1 cut(s) 301
Eco31I GGTCTC 1 cut(s) 308
Eco32I GATATC 2 cut(s) 1130, 1180
Eco47III AGCGCT 1 cut(s) 557
Eco57I CTGAAG 1 cut(s) 246
Eco81I CCTNAGG 1 cut(s) 29
Eco88I CYCGRG 1 cut(s) 1012
EcoRII CCWGG 1 cut(s) 1182
EcoRV GATATC 2 cut(s) 1130, 1180
EcoT14I CCWWGG 1 cut(s) 301
ErhI CCWWGG 1 cut(s) 301
Esp3I CGTCTC 1 cut(s) 1106
FaeI CATG 4 cut(s) 207, 305, 645, 985
FaqI GGGAC 1 cut(s) 199
FatI CATG 4 cut(s) 203, 301, 641, 981
FbaI TGATCA 1 cut(s) 549
Fnu4HI GCNGC 1 cut(s) 521
FokI GGATG 1 cut(s) 52
Fsp4HI GCNGC 1 cut(s) 521
FspBI CTAG 2 cut(s) 626, 770
GlaI GCGC 1 cut(s) 557
GluI GCNGC 1 cut(s) 521
HaeII RGCGCY 1 cut(s) 559
HaeIII GGCC 1 cut(s) 582
HapII CCGG 1 cut(s) 484
HhaI GCGC 1 cut(s) 558
Hin1II CATG 4 cut(s) 207, 305, 645, 985
Hin6I GCGC 1 cut(s) 556
HinP1I GCGC 1 cut(s) 556
HindIII AAGCTT 1 cut(s) 819
HinfI GANTC 3 cut(s) 275, 306, 735
HpaII CCGG 1 cut(s) 484
HphI GGTGA 1 cut(s) 1096
Hpy166II GTNNAC 5 cut(s) 452, 707, 767, 934, 1123
Hpy188I TCNGA 7 cut(s) 163, 265, 313, 372, 529, 844, 898
Hpy188III TCNNGA 7 cut(s) 241, 511, 692, 815, 954, 982, 1012
Hpy8I GTNNAC 5 cut(s) 452, 707, 767, 934, 1123
HpyAV CCTTC 6 cut(s) 154, 215, 389, 572, 766, 1165
HpyCH4III ACNGT 4 cut(s) 9, 184, 547, 1104
HpyCH4IV ACGT 1 cut(s) 1115
HpyCH4V TGCA 8 cut(s) 65, 227, 272, 434, 478, 669, 767, 913
HpyF10VI GCNNNNNNNGC 2 cut(s) 233, 598
HpyF3I CTNAG 7 cut(s) 29, 160, 312, 369, 509, 528, 843
HpySE526I ACGT 1 cut(s) 1115
Hsp92II CATG 4 cut(s) 207, 305, 645, 985
HspAI GCGC 1 cut(s) 556
Ksp22I TGATCA 1 cut(s) 549
Kzo9I GATC 5 cut(s) 94, 257, 364, 427, 549
LmnI GCTCC 2 cut(s) 563, 898
Lsp1109I GCAGC 1 cut(s) 507
LweI GCATC 4 cut(s) 74, 158, 672, 1177
MaeI CTAG 2 cut(s) 626, 770
MaeII ACGT 1 cut(s) 1115
MaeIII GTNAC 3 cut(s) 42, 541, 785
MalI GATC 5 cut(s) 96, 259, 366, 429, 551
MboI GATC 5 cut(s) 94, 257, 364, 427, 549
MboII GAAGA 3 cut(s) 110, 252, 347
MfeI CAATTG 1 cut(s) 1148
MflI RGATCY 1 cut(s) 427
MhlI GDGCHC 2 cut(s) 769, 878
MluCI AATT 7 cut(s) 16, 47, 187, 351, 414, 1069, 1148
MlyI GAGTC 2 cut(s) 269, 300
MmeI TCCRAC 1 cut(s) 876
MroXI GAANNNNTTC 1 cut(s) 1103
MseI TTAA 3 cut(s) 723, 867, 1029
MspI CCGG 1 cut(s) 484
MspR9I CCNGG 1 cut(s) 1184
MunI CAATTG 1 cut(s) 1148
Mva1269I GAATGC 1 cut(s) 236
MvaI CCWGG 1 cut(s) 1184
MvnI CGCG 1 cut(s) 816
MwoI GCNNNNNNNGC 2 cut(s) 233, 598
NcoI CCATGG 1 cut(s) 301
NdeII GATC 5 cut(s) 94, 257, 364, 427, 549
NlaIII CATG 4 cut(s) 207, 305, 645, 985
NlaIV GGNNCC 1 cut(s) 875
NmuCI GTSAC 1 cut(s) 42
NruI TCGCGA 1 cut(s) 816
NspI RCATGY 1 cut(s) 645
PagI TCATGA 1 cut(s) 981
PciI ACATGT 1 cut(s) 641
PctI GAATGC 1 cut(s) 236
PdmI GAANNNNTTC 1 cut(s) 1103
PfeI GAWTC 1 cut(s) 735
PfoI TCCNGGA 1 cut(s) 1182
PkrI GCNGC 1 cut(s) 522
PleI GAGTC 2 cut(s) 269, 300
PpsI GAGTC 2 cut(s) 269, 300
PscI ACATGT 1 cut(s) 641
PsiI TTATAA 1 cut(s) 825
Psp6I CCWGG 1 cut(s) 1182
PspGI CCWGG 1 cut(s) 1182
PspN4I GGNNCC 1 cut(s) 875
PstI CTGCAG 1 cut(s) 671
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 1 cut(s) 427
RruI TCGCGA 1 cut(s) 816
RsaI GTAC 3 cut(s) 6, 971, 1143
RsaNI GTAC 3 cut(s) 5, 970, 1142
SaqAI TTAA 3 cut(s) 723, 867, 1029
SatI GCNGC 1 cut(s) 521
Sau3AI GATC 5 cut(s) 94, 257, 364, 427, 549
SchI GAGTC 2 cut(s) 269, 300
ScrFI CCNGG 1 cut(s) 1184
SduI GDGCHC 2 cut(s) 769, 878
SfaNI GCATC 4 cut(s) 74, 158, 672, 1177
SfcI CTRYAG 1 cut(s) 667
SmlI CTYRAG 1 cut(s) 988
SmoI CTYRAG 1 cut(s) 988
Sse9I AATT 7 cut(s) 16, 47, 187, 351, 414, 1069, 1148
SsiI CCGC 3 cut(s) 586, 871, 1094
SspMI CTAG 2 cut(s) 626, 770
StyD4I CCNGG 1 cut(s) 1182
StyI CCWWGG 1 cut(s) 301
TaaI ACNGT 4 cut(s) 9, 184, 547, 1104
TaiI ACGT 1 cut(s) 1118
TaqI TCGA 5 cut(s) 93, 363, 576, 917, 1176
TasI AATT 7 cut(s) 16, 47, 187, 351, 414, 1069, 1148
TfiI GAWTC 1 cut(s) 735
Tru1I TTAA 3 cut(s) 723, 867, 1029
Tru9I TTAA 3 cut(s) 723, 867, 1029
TscAI CASTG 3 cut(s) 552, 671, 1086
TseFI GTSAC 1 cut(s) 42
TseI GCWGC 1 cut(s) 520
Tsp45I GTSAC 1 cut(s) 42
TspDTI ATGAA 1 cut(s) 998
TspRI CASTG 3 cut(s) 552, 671, 1086
VneI GTGCAC 1 cut(s) 765
XapI RAATTY 2 cut(s) 351, 414
XceI RCATGY 1 cut(s) 645
XcmI CCANNNNNNNNNTGG 1 cut(s) 973
XmnI GAANNNNTTC 1 cut(s) 1103
XspI CTAG 2 cut(s) 626, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.