Prupe.2G040400_v2.0.a1
ERF Family

Mitochondrial transcription termination factor family protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
4439359 .. 4441110
1752 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G040400.1

Sequence Viewer

Length: 906 bp
ATGGCATTGCTCTTCAAGTTGAAGAGCCTCAGATTGGGTTATTCAATACTTTCTTCTACATTTGCTTCAAAAACTAAAAGGTTTGTTGTTGGAGATCGAAAACCCTCAAATTTTTCTCTTCAAAATCAGTTACTCTGCCGACACTTCACCTCAGAAATCTCGGCAAACCAACACAATTTCACAGTCACTTACCTCATAAACTCATGTGGGTTGTCTCCAAAAGCTGCAATTTCAGCATCCAAGAAGGTCGAGTTGCAAACCCCAGAAAGAGCAGACTCCGTCTTGGCCCTTGTGAGAAACCATGGACTCTCTGAAGCCCAGCTCTCAAAGTTTGTCAGGTTACACCCAGAAGTTCTTTTAGCCGATCCTGAGCAAACCCTTCTGCCAAAGCTTCGGTTTTTCATCTCTCTCGGAATTTCAAAGGAGGACCTTGCGAAAACTCTGGCTTTCTGTCCGCAGATTTTGTCAAGAAGCTTGGAGAAAGAGATTTTACCCGATTATAATTTCCTTAGGAGCTTGATTCCTGAGAACAAGGTTGTTTCTGTTTTGAAGGGCCGCTCGTGGTTTTTCTTCGAAGGCCACTCCAAAAATGTGGTGCCAAATATTGATCTTTTGAGACAACTAGTTGTGGGTAAGGTCAAGGAAATGGGATTTAATCTGGAAAAAGCCACTTCCGTGTCTGCTCTACGTGTATTGTGTGGTAGGCACAAGTCAGTATGGAATCGAAGTTGGGAACTTTATAGTAGATGGGGTTGGTCTGATGACGATATTCTCTCTGCTTTCAGGCGGTATCCGCAGTGTATGATTCACTCGGAGAAGAAGGTAATGGAAGTAATGGATCTTTTAGTGAACAACATGGGATGGCCGTCAAGAAAGATTGCCCAATATCCTGTCCTGTGGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

302

Amino Acids

34.39

Weight (kDa)

9.76

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 501
AccB1I GGYRCC 1 cut(s) 595
AccBSI CCGCTC 1 cut(s) 558
AciI CCGC 4 cut(s) 455, 556, 787, 794
AclWI GGATC 2 cut(s) 359, 846
AcoI YGGCCR 1 cut(s) 863
AcsI RAATTY 2 cut(s) 109, 414
AcuI CTGAAG 1 cut(s) 333
AfiI CCNNNNNNNGG 1 cut(s) 34
AflIII ACRYGT 1 cut(s) 688
AgsI TTSAA 7 cut(s) 16, 22, 45, 69, 122, 420, 550
AhlI ACTAGT 1 cut(s) 622
AleI CACNNNNGTG 1 cut(s) 674
AluBI AGCT 5 cut(s) 224, 322, 391, 474, 516
AluI AGCT 5 cut(s) 224, 322, 391, 474, 516
Alw26I GTCTC 2 cut(s) 219, 610
AlwI GGATC 2 cut(s) 359, 846
AoxI GGCC 4 cut(s) 285, 553, 577, 863
ApeKI GCWGC 1 cut(s) 224
ApoI RAATTY 2 cut(s) 109, 414
AspS9I GGNCC 4 cut(s) 286, 427, 553, 900
AsuHPI GGTGA 1 cut(s) 139
AsuII TTCGAA 1 cut(s) 573
AvaII GGWCC 2 cut(s) 427, 900
AxyI CCTNAGG 1 cut(s) 509
BanI GGYRCC 1 cut(s) 595
BauI CACGAG 1 cut(s) 559
BbvI GCAGC 1 cut(s) 211
BccI CCATC 2 cut(s) 741, 855
BceAI ACGGC 1 cut(s) 850
BciVI GTATCC 1 cut(s) 801
BcoDI GTCTC 2 cut(s) 219, 610
BcuI ACTAGT 1 cut(s) 622
BfaI CTAG 1 cut(s) 623
BfuI GTATCC 1 cut(s) 801
BisI GCNGC 2 cut(s) 225, 556
BlsI GCNGC 2 cut(s) 226, 557
Bme18I GGWCC 2 cut(s) 427, 900
BmgT120I GGNCC 4 cut(s) 286, 427, 553, 900
BmiI GGNNCC 1 cut(s) 597
BmsI GCATC 1 cut(s) 245
Bpu10I CCTNAGC 1 cut(s) 369
Bpu14I TTCGAA 1 cut(s) 573
BsaAI YACGTR 1 cut(s) 689
BsaJI CCNNGG 1 cut(s) 301
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse21I CCTNAGG 1 cut(s) 509
Bse3DI GCAATG 1 cut(s) 5
BseDI CCNNGG 1 cut(s) 301
BseGI GGATG 2 cut(s) 236, 866
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 5
BseMII CTCAG 4 cut(s) 43, 165, 360, 516
BseXI GCAGC 1 cut(s) 211
BseYI CCCAGC 1 cut(s) 318
BshFI GGCC 4 cut(s) 287, 555, 579, 865
BshNI GGYRCC 1 cut(s) 595
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 2 cut(s) 219, 610
BsnI GGCC 4 cut(s) 287, 555, 579, 865
Bsp119I TTCGAA 1 cut(s) 573
Bsp143I GATC 4 cut(s) 94, 364, 607, 838
Bsp19I CCATGG 1 cut(s) 301
BspACI CCGC 4 cut(s) 455, 556, 787, 794
BspANI GGCC 4 cut(s) 287, 555, 579, 865
BspCNI CTCAG 4 cut(s) 42, 164, 361, 517
BspLI GGNNCC 1 cut(s) 597
BspPI GGATC 2 cut(s) 359, 846
BspQI GCTCTTC 2 cut(s) 17, 17
BspT104I TTCGAA 1 cut(s) 573
BspT107I GGYRCC 1 cut(s) 595
BsrBI CCGCTC 1 cut(s) 558
BsrDI GCAATG 1 cut(s) 5
BssECI CCNNGG 1 cut(s) 301
BssMI GATC 4 cut(s) 94, 364, 607, 838
BssSI CACGAG 1 cut(s) 559
BssT1I CCWWGG 1 cut(s) 301
Bst2BI CACGAG 1 cut(s) 559
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 3 cut(s) 17, 17, 123
BstBAI YACGTR 1 cut(s) 689
BstBI TTCGAA 1 cut(s) 573
BstDEI CTNAG 5 cut(s) 29, 151, 369, 509, 525
BstDSI CCRYGG 1 cut(s) 301
BstF5I GGATG 2 cut(s) 236, 866
BstKTI GATC 4 cut(s) 97, 367, 610, 841
BstMAI GTCTC 2 cut(s) 219, 610
BstMBI GATC 4 cut(s) 94, 364, 607, 838
BstMWI GCNNNNNNNGC 2 cut(s) 233, 793
BstV1I GCAGC 1 cut(s) 211
BstX2I RGATCY 1 cut(s) 838
BstXI CCANNNNNNTGG 1 cut(s) 592
BstYI RGATCY 1 cut(s) 838
Bsu36I CCTNAGG 1 cut(s) 509
BsuI GTATCC 1 cut(s) 801
BsuRI GGCC 4 cut(s) 287, 555, 579, 865
BtgI CCRYGG 1 cut(s) 301
BtsCI GGATG 2 cut(s) 236, 866
BtsI GCAGTG 1 cut(s) 803
BtsIMutI CAGTG 1 cut(s) 803
Cfr13I GGNCC 4 cut(s) 286, 427, 553, 900
CviAII CATG 3 cut(s) 204, 302, 856
DdeI CTNAG 5 cut(s) 29, 151, 369, 509, 525
DpnI GATC 4 cut(s) 96, 366, 609, 840
DpnII GATC 4 cut(s) 94, 364, 607, 838
EaeI YGGCCR 1 cut(s) 863
Eam1104I CTCTTC 3 cut(s) 17, 17, 123
EarI CTCTTC 3 cut(s) 17, 17, 123
Eco130I CCWWGG 1 cut(s) 301
Eco47I GGWCC 2 cut(s) 427, 900
Eco57I CTGAAG 1 cut(s) 333
Eco81I CCTNAGG 1 cut(s) 509
EcoO109I RGGNCCY 1 cut(s) 427
EcoT14I CCWWGG 1 cut(s) 301
ErhI CCWWGG 1 cut(s) 301
FaeI CATG 3 cut(s) 207, 305, 859
FaiI YATR 8 cut(s) 197, 205, 303, 501, 718, 741, 803, 857
FatI CATG 3 cut(s) 203, 301, 855
Fnu4HI GCNGC 2 cut(s) 225, 556
FokI GGATG 2 cut(s) 223, 873
Fsp4HI GCNGC 2 cut(s) 225, 556
FspBI CTAG 1 cut(s) 623
GluI GCNGC 2 cut(s) 225, 556
GsaI CCCAGC 1 cut(s) 322
HaeIII GGCC 4 cut(s) 287, 555, 579, 865
Hin1II CATG 3 cut(s) 207, 305, 859
HindIII AAGCTT 2 cut(s) 389, 472
HinfI GANTC 5 cut(s) 275, 306, 520, 721, 805
HphI GGTGA 1 cut(s) 139
Hpy166II GTNNAC 1 cut(s) 850
Hpy188I TCNGA 6 cut(s) 32, 154, 313, 413, 760, 814
Hpy188III TCNNGA 5 cut(s) 368, 468, 524, 659, 870
Hpy8I GTNNAC 1 cut(s) 850
HpyAV CCTTC 5 cut(s) 238, 389, 544, 569, 814
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 1 cut(s) 688
HpyCH4V TGCA 2 cut(s) 227, 256
HpyF10VI GCNNNNNNNGC 2 cut(s) 233, 793
HpyF3I CTNAG 5 cut(s) 29, 151, 369, 509, 525
HpySE526I ACGT 1 cut(s) 688
Hsp92II CATG 3 cut(s) 207, 305, 859
Kzo9I GATC 4 cut(s) 94, 364, 607, 838
LguI GCTCTTC 2 cut(s) 17, 17
LmnI GCTCC 1 cut(s) 513
LpnPI CCDG 9 cut(s) 276, 322, 332, 360, 381, 428, 537, 644, 769
Lsp1109I GCAGC 1 cut(s) 211
LweI GCATC 1 cut(s) 245
MaeI CTAG 1 cut(s) 623
MaeII ACGT 1 cut(s) 688
MaeIII GTNAC 3 cut(s) 129, 184, 339
MalI GATC 4 cut(s) 96, 366, 609, 840
MbiI CCGCTC 1 cut(s) 558
MboI GATC 4 cut(s) 94, 364, 607, 838
MboII GAAGA 6 cut(s) 4, 34, 45, 110, 562, 829
MflI RGATCY 1 cut(s) 838
MluCI AATT 5 cut(s) 109, 175, 228, 414, 502
MlyI GAGTC 2 cut(s) 269, 300
MmeI TCCRAC 1 cut(s) 70
MnlI CCTC 5 cut(s) 38, 115, 160, 203, 418
MseI TTAA 1 cut(s) 654
MslI CAYNNNNRTG 1 cut(s) 674
MwoI GCNNNNNNNGC 2 cut(s) 233, 793
NcoI CCATGG 1 cut(s) 301
NdeII GATC 4 cut(s) 94, 364, 607, 838
NlaIII CATG 3 cut(s) 207, 305, 859
NlaIV GGNNCC 1 cut(s) 597
NmeAIII GCCGAG 1 cut(s) 140
NmuCI GTSAC 1 cut(s) 184
NspV TTCGAA 1 cut(s) 573
OliI CACNNNNGTG 1 cut(s) 674
PciSI GCTCTTC 2 cut(s) 17, 17
PfeI GAWTC 3 cut(s) 520, 721, 805
PflFI GACNNNGTC 1 cut(s) 278
PkrI GCNGC 2 cut(s) 226, 557
PleI GAGTC 2 cut(s) 269, 300
PpsI GAGTC 2 cut(s) 269, 300
Ppu21I YACGTR 1 cut(s) 689
PpuMI RGGWCCY 1 cut(s) 427
PsiI TTATAA 1 cut(s) 501
Psp5II RGGWCCY 1 cut(s) 427
PspFI CCCAGC 1 cut(s) 318
PspN4I GGNNCC 1 cut(s) 597
PspPI GGNCC 4 cut(s) 286, 427, 553, 900
PspPPI RGGWCCY 1 cut(s) 427
PsuI RGATCY 1 cut(s) 838
PsyI GACNNNGTC 1 cut(s) 278
RseI CAYNNNNRTG 1 cut(s) 674
SapI GCTCTTC 2 cut(s) 17, 17
SaqAI TTAA 1 cut(s) 654
SatI GCNGC 2 cut(s) 225, 556
Sau3AI GATC 4 cut(s) 94, 364, 607, 838
Sau96I GGNCC 4 cut(s) 286, 427, 553, 900
SchI GAGTC 2 cut(s) 269, 300
SfaNI GCATC 1 cut(s) 245
SfuI TTCGAA 1 cut(s) 573
SinI GGWCC 2 cut(s) 427, 900
SmiMI CAYNNNNRTG 1 cut(s) 674
SpeI ACTAGT 1 cut(s) 622
Sse9I AATT 5 cut(s) 109, 175, 228, 414, 502
SsiI CCGC 4 cut(s) 455, 556, 787, 794
SspI AATATT 1 cut(s) 604
SspMI CTAG 1 cut(s) 623
StyI CCWWGG 1 cut(s) 301
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 1 cut(s) 691
TaqI TCGA 4 cut(s) 97, 249, 573, 724
TasI AATT 5 cut(s) 109, 175, 228, 414, 502
TauI GCSGC 1 cut(s) 558
TfiI GAWTC 3 cut(s) 520, 721, 805
Tru1I TTAA 1 cut(s) 654
Tru9I TTAA 1 cut(s) 654
TscAI CASTG 1 cut(s) 803
TseFI GTSAC 1 cut(s) 184
TseI GCWGC 1 cut(s) 224
Tsp45I GTSAC 1 cut(s) 184
TspDTI ATGAA 1 cut(s) 391
TspGWI ACGGA 2 cut(s) 268, 664
TspRI CASTG 1 cut(s) 803
Tth111I GACNNNGTC 1 cut(s) 278
VpaK11BI GGWCC 2 cut(s) 427, 900
XapI RAATTY 2 cut(s) 109, 414
XspI CTAG 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.