RchiOBHm_Chr6g0293121
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000115
Physical Location & Seq
Reverse (-)
55903890 .. 55905071
1182 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26302

Sequence Viewer

Length: 1182 bp
ATGGCACCCCACTCAATTTTCAGCAAGAGCCTCAGATTTTGTCGTGTGTTTTACAGAAATGGGCACCCAGTCGGGGGAATGGCTTCGCATTTTGGTCCTCAAAAGCAGTTGTTTTGTACAAGACTCACCGGCAGGTCCGAAATCCCAGCCGACCAAGATGATTCTACAGTCTCCTACCTGGTTAACTCGTGTGGGTTGTCCCCAGAATCCGCTACTCTAGTATCCCACACGGTAAAGCTTCAATCTTTAGAGAAACCAGACTCCGTTTTAGCGCTTTTGAAACACTATGAATTCTCAGAGGCCCAGATTTCAAAGGTTGTGCAGAGACTCCCACATATTCTCTTGGCCGATGTGGAGCAAACCCTTTTGCCAAACCTCGAGTTTTACTGCTCCATAGGAATGTCAAGGCTCCACCTTGCAAGAACACTGAGCTACAACCCATGGCTCATGAGTCTAAGCTTGAAAAACGATATTGTACCAGCTTATAGCTTCTTCAAGAGCGTGGTGATCTCTGATGTCAAAGTGATCCATATTTTGAAGCACAAGTCCTGGATTTTCAGGGAAAATTTATCCAAGAATTTGATACCCAATATTGAGCTTGTGAGAGAATTGGGCATTCCCCAGTCCTGCATTGCCCTCTTGCTAACTAGTTATACTGATGTAGTGATGAAAAAGCCCGAATTGTTCAGTCAACTTGTGCATCAAGTCACAGAAATGGGATTTGACCCTCAAAATTTGAGCTTTGTGCAGGCCATACACGCATTATATGGGAAAGAGACGACATGGAAACGATGTCAAGAGGTTTATAGGAGGTGGGGTTGGTCTGAGAATCATATACGTTCTGCTTTCAGGGTGTCTCCACTGTGTATGGTTATGTCAGAGAAGAAACTAATGGGAACAATGGATTTCTTAGTGAACAAGATGGGGTGGCAGTCACAAACAATTGCGAAACATCCCCATGTTTTGAGTTACAGCTTGCAGAAGAGATTCATCCCGAGGTTTTCAGTTGTTCGAGTTTTGTTTTTGAAAGGATTGATAGAAGAGGAGAACTTGAGTTTGGCTACTGGGATTTCAAAGTCAGAGAAGTACTTCTTGGATAGGTTTGTGAACAGATATCTCAGCCAAGTACCTCAATTGTTGGATGTGTACCGTGGAAAAGTAGATATCCAGGATGTGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

393

Amino Acids

45.1

Weight (kDa)

9.3

Isoelectric Point (pI)

52.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 90 - 246 2.6e-22 mTERF
mTERF PF02536 259 - 364 1.6e-14 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 123
AccB1I GGYRCC 2 cut(s) 4, 63
AciI CCGC 1 cut(s) 210
AclWI GGATC 1 cut(s) 520
AcoI YGGCCR 1 cut(s) 345
AcsI RAATTY 4 cut(s) 290, 565, 577, 733
AfaI GTAC 5 cut(s) 118, 477, 1088, 1128, 1148
AfeI AGCGCT 1 cut(s) 273
AfiI CCNNNNNNNGG 2 cut(s) 73, 74
AgsI TTSAA 8 cut(s) 242, 280, 312, 463, 496, 538, 1027, 1074
AhlI ACTAGT 1 cut(s) 647
AjnI CCWGG 3 cut(s) 177, 548, 1167
AjuI GAANNNNNNNTTGG 4 cut(s) 1040, 1072, 1076, 1108
AluBI AGCT 8 cut(s) 238, 432, 459, 482, 489, 598, 741, 975
AluI AGCT 8 cut(s) 238, 432, 459, 482, 489, 598, 741, 975
Alw26I GTCTC 4 cut(s) 175, 319, 770, 861
AlwI GGATC 1 cut(s) 520
Ama87I CYCGRG 2 cut(s) 377, 994
Aor51HI AGCGCT 1 cut(s) 273
AoxI GGCC 3 cut(s) 300, 345, 750
ApoI RAATTY 4 cut(s) 290, 565, 577, 733
Asp700I GAANNNNTTC 3 cut(s) 82, 986, 1088
AspLEI GCGC 1 cut(s) 274
AspS9I GGNCC 3 cut(s) 95, 135, 301
AsuHPI GGTGA 2 cut(s) 118, 517
AvaI CYCGRG 2 cut(s) 377, 994
AvaII GGWCC 2 cut(s) 95, 135
BaeGI GKGCMC 1 cut(s) 66
BaeI ACNNNNGTAYC 2 cut(s) 204, 237
BanI GGYRCC 2 cut(s) 4, 63
BauI CACGAG 1 cut(s) 187
BccI CCATC 1 cut(s) 916
BciT130I CCWGG 3 cut(s) 179, 550, 1169
BciVI GTATCC 1 cut(s) 232
BcoDI GTCTC 4 cut(s) 175, 319, 770, 861
BcuI ACTAGT 1 cut(s) 647
BfaI CTAG 2 cut(s) 218, 648
BfmI CTRYAG 1 cut(s) 165
BfoI RGCGCY 1 cut(s) 275
BfuAI ACCTGC 1 cut(s) 123
BfuI GTATCC 1 cut(s) 232
BmcAI AGTACT 1 cut(s) 1088
Bme1390I CCNGG 3 cut(s) 179, 550, 1169
Bme18I GGWCC 2 cut(s) 95, 135
BmeT110I CYCGRG 2 cut(s) 377, 994
BmgT120I GGNCC 3 cut(s) 95, 135, 301
BmiI GGNNCC 3 cut(s) 6, 65, 410
BmrFI CCNGG 3 cut(s) 179, 550, 1169
BmrI ACTGGG 3 cut(s) 62, 616, 1074
BmsI GCATC 1 cut(s) 709
BmuI ACTGGG 3 cut(s) 62, 616, 1074
BpuEI CTTGAG 1 cut(s) 1072
BsaJI CCNNGG 3 cut(s) 440, 995, 1150
BsaXI ACNNNNNCTCC 2 cut(s) 802, 832
Bsc4I CCNNNNNNNGG 2 cut(s) 73, 74
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 3 cut(s) 68, 622, 1069
Bse3DI GCAATG 1 cut(s) 630
BseBI CCWGG 3 cut(s) 179, 550, 1169
BseDI CCNNGG 3 cut(s) 440, 995, 1150
BseGI GGATG 4 cut(s) 952, 990, 1147, 1177
BseLI CCNNNNNNNGG 2 cut(s) 73, 74
BseMI GCAATG 1 cut(s) 630
BseMII CTCAG 5 cut(s) 46, 309, 419, 816, 1132
BseNI ACTGG 3 cut(s) 68, 622, 1069
BseRI GAGGAG 1 cut(s) 1058
BseSI GKGCMC 1 cut(s) 66
BseYI CCCAGC 1 cut(s) 145
BsgI GTGCAG 2 cut(s) 341, 767
BshFI GGCC 3 cut(s) 302, 347, 752
BshNI GGYRCC 2 cut(s) 4, 63
BsiHKCI CYCGRG 2 cut(s) 377, 994
BsiSI CCGG 1 cut(s) 129
BslFI GGGAC 1 cut(s) 184
BslI CCNNNNNNNGG 2 cut(s) 73, 74
BsmAI GTCTC 4 cut(s) 175, 319, 770, 861
BsmBI CGTCTC 1 cut(s) 770
BsmFI GGGAC 1 cut(s) 184
BsmI GAATGC 1 cut(s) 615
BsnI GGCC 3 cut(s) 302, 347, 752
BsoBI CYCGRG 2 cut(s) 377, 994
Bsp1286I GDGCHC 1 cut(s) 66
Bsp1407I TGTACA 1 cut(s) 116
Bsp143I GATC 2 cut(s) 507, 525
Bsp19I CCATGG 1 cut(s) 440
BspACI CCGC 1 cut(s) 210
BspANI GGCC 3 cut(s) 302, 347, 752
BspCNI CTCAG 5 cut(s) 45, 308, 420, 817, 1131
BspHI TCATGA 1 cut(s) 447
BspLI GGNNCC 3 cut(s) 6, 65, 410
BspMI ACCTGC 1 cut(s) 123
BspPI GGATC 1 cut(s) 520
BspT107I GGYRCC 2 cut(s) 4, 63
BsrDI GCAATG 1 cut(s) 630
BsrFI RCCGGY 1 cut(s) 128
BsrGI TGTACA 1 cut(s) 116
BsrI ACTGG 3 cut(s) 68, 622, 1069
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 3 cut(s) 440, 995, 1150
BssMI GATC 2 cut(s) 507, 525
BssSI CACGAG 1 cut(s) 187
BssT1I CCWWGG 1 cut(s) 440
Bst2BI CACGAG 1 cut(s) 187
Bst2UI CCWGG 3 cut(s) 179, 550, 1169
Bst4CI ACNGT 4 cut(s) 169, 232, 864, 1151
Bst6I CTCTTC 2 cut(s) 977, 1035
BstAUI TGTACA 1 cut(s) 116
BstC8I GCNNGC 2 cut(s) 750, 977
BstDEI CTNAG 7 cut(s) 32, 295, 428, 455, 825, 910, 1118
BstDSI CCRYGG 2 cut(s) 440, 1150
BstF5I GGATG 4 cut(s) 952, 990, 1147, 1177
BstH2I RGCGCY 1 cut(s) 275
BstHHI GCGC 1 cut(s) 274
BstKTI GATC 2 cut(s) 510, 528
BstMAI GTCTC 4 cut(s) 175, 319, 770, 861
BstMBI GATC 2 cut(s) 507, 525
BstMWI GCNNNNNNNGC 1 cut(s) 758
BstNI CCWGG 3 cut(s) 179, 550, 1169
BstSCI CCNGG 3 cut(s) 177, 548, 1167
BstSFI CTRYAG 1 cut(s) 165
BstSLI GKGCMC 1 cut(s) 66
BsuI GTATCC 1 cut(s) 232
BsuRI GGCC 3 cut(s) 302, 347, 752
BtgI CCRYGG 2 cut(s) 440, 1150
BtsCI GGATG 4 cut(s) 952, 990, 1147, 1177
BtsIMutI CAGTG 2 cut(s) 425, 860
BveI ACCTGC 1 cut(s) 123
Cac8I GCNNGC 2 cut(s) 750, 977
CciI TCATGA 1 cut(s) 447
CfoI GCGC 1 cut(s) 274
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 95, 135, 301
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 5 cut(s) 117, 476, 1087, 1127, 1147
CviAII CATG 4 cut(s) 441, 448, 783, 959
CviQI GTAC 5 cut(s) 117, 476, 1087, 1127, 1147
DdeI CTNAG 7 cut(s) 32, 295, 428, 455, 825, 910, 1118
DpnI GATC 2 cut(s) 509, 527
DpnII GATC 2 cut(s) 507, 525
EaeI YGGCCR 1 cut(s) 345
Eam1104I CTCTTC 2 cut(s) 977, 1035
EarI CTCTTC 2 cut(s) 977, 1035
Eco130I CCWWGG 1 cut(s) 440
Eco32I GATATC 2 cut(s) 1115, 1165
Eco47I GGWCC 2 cut(s) 95, 135
Eco47III AGCGCT 1 cut(s) 273
Eco88I CYCGRG 2 cut(s) 377, 994
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 3 cut(s) 177, 548, 1167
EcoRV GATATC 2 cut(s) 1115, 1165
EcoT14I CCWWGG 1 cut(s) 440
ErhI CCWWGG 1 cut(s) 440
Esp3I CGTCTC 1 cut(s) 770
FaeI CATG 4 cut(s) 444, 451, 786, 962
FalI AAGNNNNNCTT 2 cut(s) 1076, 1108
FaqI GGGAC 1 cut(s) 184
FatI CATG 4 cut(s) 440, 447, 782, 958
FokI GGATG 3 cut(s) 939, 977, 1154
FspBI CTAG 2 cut(s) 218, 648
GlaI GCGC 1 cut(s) 273
GsaI CCCAGC 1 cut(s) 149
HaeII RGCGCY 1 cut(s) 275
HaeIII GGCC 3 cut(s) 302, 347, 752
HapII CCGG 1 cut(s) 129
HhaI GCGC 1 cut(s) 274
Hin1II CATG 4 cut(s) 444, 451, 786, 962
Hin6I GCGC 1 cut(s) 272
HinP1I GCGC 1 cut(s) 272
HincII GTYRAC 2 cut(s) 184, 692
HindII GTYRAC 2 cut(s) 184, 692
HindIII AAGCTT 2 cut(s) 236, 457
HinfI GANTC 8 cut(s) 123, 161, 206, 260, 327, 451, 829, 987
HpaI GTTAAC 1 cut(s) 184
HpaII CCGG 1 cut(s) 129
HphI GGTGA 2 cut(s) 118, 517
Hpy166II GTNNAC 5 cut(s) 184, 692, 916, 1108, 1147
Hpy188I TCNGA 7 cut(s) 35, 139, 298, 514, 826, 880, 1081
Hpy188III TCNNGA 4 cut(s) 448, 496, 797, 994
Hpy8I GTNNAC 5 cut(s) 184, 692, 916, 1108, 1147
HpyCH4III ACNGT 4 cut(s) 169, 232, 864, 1151
HpyCH4IV ACGT 1 cut(s) 838
HpyCH4V TGCA 6 cut(s) 322, 419, 630, 700, 748, 979
HpyF10VI GCNNNNNNNGC 1 cut(s) 758
HpyF3I CTNAG 7 cut(s) 32, 295, 428, 455, 825, 910, 1118
HpySE526I ACGT 1 cut(s) 838
Hsp92II CATG 4 cut(s) 444, 451, 786, 962
HspAI GCGC 1 cut(s) 272
KspAI GTTAAC 1 cut(s) 184
Kzo9I GATC 2 cut(s) 507, 525
LmnI GCTCC 3 cut(s) 355, 395, 414
LweI GCATC 1 cut(s) 709
MabI ACCWGGT 1 cut(s) 177
MaeI CTAG 2 cut(s) 218, 648
MaeII ACGT 1 cut(s) 838
MaeIII GTNAC 3 cut(s) 706, 933, 968
MalI GATC 2 cut(s) 509, 527
MboI GATC 2 cut(s) 507, 525
MboII GAAGA 4 cut(s) 484, 895, 994, 1052
MfeI CAATTG 2 cut(s) 942, 1133
MhlI GDGCHC 1 cut(s) 66
MluCI AATT 9 cut(s) 15, 290, 565, 577, 608, 680, 733, 942, 1133
MlyI GAGTC 4 cut(s) 117, 254, 321, 460
MmeI TCCRAC 1 cut(s) 1119
MroXI GAANNNNTTC 3 cut(s) 82, 986, 1088
MseI TTAA 1 cut(s) 183
MslI CAYNNNNRTG 3 cut(s) 398, 713, 957
MspI CCGG 1 cut(s) 129
MspR9I CCNGG 3 cut(s) 179, 550, 1169
MunI CAATTG 2 cut(s) 942, 1133
Mva1269I GAATGC 1 cut(s) 615
MvaI CCWGG 3 cut(s) 179, 550, 1169
MwoI GCNNNNNNNGC 1 cut(s) 758
NcoI CCATGG 1 cut(s) 440
NdeII GATC 2 cut(s) 507, 525
NlaIII CATG 4 cut(s) 444, 451, 786, 962
NlaIV GGNNCC 3 cut(s) 6, 65, 410
NmuCI GTSAC 2 cut(s) 706, 933
PaeR7I CTCGAG 1 cut(s) 377
PagI TCATGA 1 cut(s) 447
PctI GAATGC 1 cut(s) 615
PdmI GAANNNNTTC 3 cut(s) 82, 986, 1088
PfeI GAWTC 4 cut(s) 161, 206, 829, 987
PfoI TCCNGGA 2 cut(s) 548, 1167
PleI GAGTC 4 cut(s) 117, 254, 321, 459
PpsI GAGTC 4 cut(s) 117, 254, 321, 459
Psp6I CCWGG 3 cut(s) 177, 548, 1167
PspFI CCCAGC 1 cut(s) 145
PspGI CCWGG 3 cut(s) 177, 548, 1167
PspN4I GGNNCC 3 cut(s) 6, 65, 410
PspPI GGNCC 3 cut(s) 95, 135, 301
PspXI VCTCGAGB 1 cut(s) 377
RsaI GTAC 5 cut(s) 118, 477, 1088, 1128, 1148
RsaNI GTAC 5 cut(s) 117, 476, 1087, 1127, 1147
RseI CAYNNNNRTG 3 cut(s) 398, 713, 957
SaqAI TTAA 1 cut(s) 183
Sau3AI GATC 2 cut(s) 507, 525
Sau96I GGNCC 3 cut(s) 95, 135, 301
ScaI AGTACT 1 cut(s) 1088
SchI GAGTC 4 cut(s) 117, 254, 321, 460
ScrFI CCNGG 3 cut(s) 179, 550, 1169
SduI GDGCHC 1 cut(s) 66
SexAI ACCWGGT 1 cut(s) 177
SfaNI GCATC 1 cut(s) 709
SfcI CTRYAG 1 cut(s) 165
Sfr274I CTCGAG 1 cut(s) 377
SinI GGWCC 2 cut(s) 95, 135
SlaI CTCGAG 1 cut(s) 377
SmiMI CAYNNNNRTG 3 cut(s) 398, 713, 957
SmlI CTYRAG 2 cut(s) 377, 1051
SmoI CTYRAG 2 cut(s) 377, 1051
SpeI ACTAGT 1 cut(s) 647
Sse9I AATT 9 cut(s) 15, 290, 565, 577, 608, 680, 733, 942, 1133
SsiI CCGC 1 cut(s) 210
SspI AATATT 1 cut(s) 592
SspMI CTAG 2 cut(s) 218, 648
StyD4I CCNGG 3 cut(s) 177, 548, 1167
StyI CCWWGG 1 cut(s) 440
TaaI ACNGT 4 cut(s) 169, 232, 864, 1151
TaiI ACGT 1 cut(s) 841
TaqI TCGA 2 cut(s) 378, 1012
TasI AATT 9 cut(s) 15, 290, 565, 577, 608, 680, 733, 942, 1133
TatI WGTACW 2 cut(s) 116, 1086
TfiI GAWTC 4 cut(s) 161, 206, 829, 987
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TscAI CASTG 2 cut(s) 432, 867
TseFI GTSAC 2 cut(s) 706, 933
Tsp45I GTSAC 2 cut(s) 706, 933
TspDTI ATGAA 3 cut(s) 303, 683, 979
TspGWI ACGGA 1 cut(s) 253
TspRI CASTG 2 cut(s) 432, 867
VpaK11BI GGWCC 2 cut(s) 95, 135
XapI RAATTY 4 cut(s) 290, 565, 577, 733
XhoI CTCGAG 1 cut(s) 377
XmnI GAANNNNTTC 3 cut(s) 82, 986, 1088
XspI CTAG 2 cut(s) 218, 648
ZrmI AGTACT 1 cut(s) 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.