Rh6DG345000
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000115
Physical Location & Seq
Forward (+)
54773374 .. 54775787
2414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG345000.1

Sequence Viewer

Length: 1326 bp
ATGGCAGCCAACTCCATTTTCAGATTGGCATCCCCAATATTGACTCGTCTGTTTTGCAGAAATTGGCTCTCTCTCCATGCAGTTGCTGATTCTCGTTTTCGTCTTCAAAGTCAGTGCTTTTGTACAAAAAGACTGACCAGCAGCAGCAGCTCCGATGATTTTACAGTCTCCTACCTGGTTAACTCATGTGGGCTTTCCCCAGAAGCCGCCATTGTAGCATCCCACAAGGTAAAGCTTCCGTCTTTCGAGAAACCAGACTCCGTTTTAGCGCTTCTGAAACACTATGAATTTTCAGAAACCCAGATCTCAACTCTTGTGCGGAGACACCCACATGTTCTGGTGGCAAATGCCCAGGAAACCCTTTTGCCGAAGCTCGAGTTTTTGTGCTCCATAGGAATGTCAAGGCTCGACCTTGCAAGAACACTGGCAAACAACCCAGTTGTTTTGATGCGAAGTTTGGAATACCAAATTAGACCCTCTTATACCTTCTTCAAAAAAGTGGTGCTCTCTGATGTGAAGGTCGTCGATATTTGGAAGCGCAACTCATGGATTTTCAGGGGAAATCTGTTCAAGAATGTGATGCCCAATATTGAGCTTGTGAGAGAATTGGGCATGCCCCAGTCCTGTATTGCCCTGTTGCTAACATATTATGCTACTATTGTGATGAAAAAGCCTGAATTCTTCAGTCAACTTGTGGGTGAGGTCAAAGAAATGGGATTTGACCCTCAAAGGTCGAGCTTTGTGCAGGCCATGCATGCATTATCTGGAAAAGAGACGACATGGAAACTCTGTCAAGAGGCTTATAGGAGGTGGGGTTGGTCTGACGAGGATATTCTTGATGCCTTCAGGTCGCATCCGCTGTGTATGATGAAGTCAGGGAAGAAAATAATGGAAACAATGGATTTCTTAGTGAACAAGATGGGGTGGCAGTCACAGAAGATTGCAAGGTCTTCCAGGGTTTTGGGTTACAGCTTGGAGAAGAGAATCATCCCAAGGTGTTCCGTTGTTAGAATTTTGTTGTTGAAAGGATTGATGAAAGAGGAAGAGTTGAATATGAATACTATTACTACTCCTTCAGAGAAATACTTCTTGACTAAGTTTGTGAGCAGATATCTCAACCAAGTACCTCAATTGTTGAATGTGTACCAAGGGAAAGTGGATTTTCAGGATTTGATGAAAAGACGGTGTTTGCTGTTGCTGCTGAGTCTGAGTAGAGAAGGCGCTGGAAAACAAGGTGGTCCCGAAGCCGCCGGTGGAAAACAACGACGTGGTGGGAGTTCCGAAGAATGGGGTGGAACTAGGAGTGAAGAAGGACGGGGTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

441

Amino Acids

50.3

Weight (kDa)

9.65

Isoelectric Point (pI)

57.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 89 - 242 1e-20 mTERF
mTERF PF02536 260 - 363 5.4e-13 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 207, 319, 857, 1248
AcsI RAATTY 3 cut(s) 287, 677, 1011
AcuI CTGAAG 3 cut(s) 667, 829, 1059
AfaI GTAC 3 cut(s) 124, 1125, 1145
AfeI AGCGCT 1 cut(s) 270
AfiI CCNNNNNNNGG 1 cut(s) 1287
AflIII ACRYGT 1 cut(s) 331
AgsI TTSAA 6 cut(s) 107, 493, 571, 1024, 1051, 1138
AjiI CACGTC 1 cut(s) 1268
AjnI CCWGG 3 cut(s) 174, 351, 953
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 6 cut(s) 150, 235, 373, 595, 738, 972
AluI AGCT 6 cut(s) 150, 235, 373, 595, 738, 972
Alw21I GWGCWC 2 cut(s) 389, 507
Alw26I GTCTC 3 cut(s) 172, 316, 767
AlwNI CAGNNNCTG 1 cut(s) 86
Ama87I CYCGRG 1 cut(s) 374
Aor51HI AGCGCT 1 cut(s) 270
AoxI GGCC 1 cut(s) 747
ApeKI GCWGC 5 cut(s) 5, 141, 144, 147, 1198
ApoI RAATTY 3 cut(s) 287, 677, 1011
Asp700I GAANNNNTTC 1 cut(s) 1085
AspLEI GCGC 3 cut(s) 271, 540, 1223
AspS9I GGNCC 1 cut(s) 1238
AsuHPI GGTGA 1 cut(s) 710
AvaI CYCGRG 1 cut(s) 374
AvaII GGWCC 1 cut(s) 1238
BbsI GAAGAC 2 cut(s) 95, 942
Bbv12I GWGCWC 2 cut(s) 389, 507
BbvI GCAGC 5 cut(s) 17, 153, 156, 159, 1185
BccI CCATC 1 cut(s) 913
BcgI CGANNNNNNTGC 2 cut(s) 724, 758
BciT130I CCWGG 3 cut(s) 176, 353, 955
BcoDI GTCTC 3 cut(s) 172, 316, 767
BfaI CTAG 1 cut(s) 1299
BfoI RGCGCY 2 cut(s) 272, 1224
BglII AGATCT 1 cut(s) 303
BisI GCNGC 7 cut(s) 6, 142, 145, 148, 207, 1199, 1248
BlsI GCNGC 7 cut(s) 7, 143, 146, 149, 208, 1200, 1249
Bme1390I CCNGG 3 cut(s) 176, 353, 955
Bme18I GGWCC 1 cut(s) 1238
BmeT110I CYCGRG 1 cut(s) 374
BmgBI CACGTC 1 cut(s) 1268
BmgT120I GGNCC 1 cut(s) 1238
BmiI GGNNCC 1 cut(s) 1240
BmrFI CCNGG 3 cut(s) 176, 353, 955
BmrI ACTGGG 2 cut(s) 431, 613
BmsI GCATC 6 cut(s) 38, 227, 438, 570, 829, 862
BmuI ACTGGG 2 cut(s) 431, 613
BpiI GAAGAC 2 cut(s) 95, 942
BsaBI GATNNNNATC 1 cut(s) 28
BsaJI CCNNGG 4 cut(s) 351, 954, 992, 1147
BsaXI ACNNNNNCTCC 2 cut(s) 799, 829
Bsc4I CCNNNNNNNGG 1 cut(s) 1287
Bse118I RCCGGY 1 cut(s) 1250
Bse1I ACTGG 3 cut(s) 429, 437, 619
Bse8I GATNNNNATC 1 cut(s) 28
BseBI CCWGG 3 cut(s) 176, 353, 955
BseDI CCNNGG 4 cut(s) 351, 954, 992, 1147
BseGI GGATG 4 cut(s) 29, 218, 853, 987
BseJI GATNNNNATC 1 cut(s) 28
BseLI CCNNNNNNNGG 1 cut(s) 1287
BseMII CTCAG 2 cut(s) 1193, 1199
BseNI ACTGG 3 cut(s) 429, 437, 619
BseXI GCAGC 5 cut(s) 17, 153, 156, 159, 1185
BsgI GTGCAG 1 cut(s) 764
BshFI GGCC 1 cut(s) 749
BsiHKAI GWGCWC 2 cut(s) 389, 507
BsiHKCI CYCGRG 1 cut(s) 374
BsiSI CCGG 1 cut(s) 1251
BslFI GGGAC 1 cut(s) 1224
BslI CCNNNNNNNGG 1 cut(s) 1287
BsmAI GTCTC 3 cut(s) 172, 316, 767
BsmBI CGTCTC 1 cut(s) 767
BsmFI GGGAC 1 cut(s) 1224
BsnI GGCC 1 cut(s) 749
BsoBI CYCGRG 1 cut(s) 374
Bsp1286I GDGCHC 2 cut(s) 389, 507
Bsp1407I TGTACA 1 cut(s) 122
Bsp143I GATC 1 cut(s) 303
BspACI CCGC 4 cut(s) 207, 319, 857, 1248
BspANI GGCC 1 cut(s) 749
BspCNI CTCAG 2 cut(s) 1194, 1200
BspLI GGNNCC 1 cut(s) 1240
BsrFI RCCGGY 1 cut(s) 1250
BsrGI TGTACA 1 cut(s) 122
BsrI ACTGG 3 cut(s) 429, 437, 619
BssAI RCCGGY 1 cut(s) 1250
BssECI CCNNGG 4 cut(s) 351, 954, 992, 1147
BssMI GATC 1 cut(s) 303
BssT1I CCWWGG 2 cut(s) 992, 1147
Bst2UI CCWGG 3 cut(s) 176, 353, 955
Bst4CI ACNGT 2 cut(s) 166, 1185
Bst6I CTCTTC 2 cut(s) 974, 1038
BstAPI GCANNNNNTGC 1 cut(s) 751
BstAUI TGTACA 1 cut(s) 122
BstC8I GCNNGC 3 cut(s) 614, 747, 756
BstDEI CTNAG 4 cut(s) 907, 1095, 1202, 1208
BstF5I GGATG 4 cut(s) 29, 218, 853, 987
BstH2I RGCGCY 2 cut(s) 272, 1224
BstHHI GCGC 3 cut(s) 271, 540, 1223
BstKTI GATC 1 cut(s) 306
BstMAI GTCTC 3 cut(s) 172, 316, 767
BstMBI GATC 1 cut(s) 303
BstMWI GCNNNNNNNGC 5 cut(s) 147, 215, 751, 755, 1198
BstNI CCWGG 3 cut(s) 176, 353, 955
BstNSI RCATGY 3 cut(s) 335, 616, 758
BstSCI CCNGG 3 cut(s) 174, 351, 953
BstV1I GCAGC 5 cut(s) 17, 153, 156, 159, 1185
BstV2I GAAGAC 2 cut(s) 95, 942
BstX2I RGATCY 1 cut(s) 303
BstXI CCANNNNNNTGG 1 cut(s) 961
BstYI RGATCY 1 cut(s) 303
BsuRI GGCC 1 cut(s) 749
BtrI CACGTC 1 cut(s) 1268
BtsCI GGATG 4 cut(s) 29, 218, 853, 987
BtsIMutI CAGTG 2 cut(s) 119, 422
Cac8I GCNNGC 3 cut(s) 614, 747, 756
CaiI CAGNNNCTG 1 cut(s) 86
CfoI GCGC 3 cut(s) 271, 540, 1223
Cfr10I RCCGGY 1 cut(s) 1250
Cfr13I GGNCC 1 cut(s) 1238
CsiI ACCWGGT 1 cut(s) 174
Csp6I GTAC 3 cut(s) 123, 1124, 1144
CviAII CATG 8 cut(s) 77, 186, 332, 546, 613, 751, 755, 780
CviQI GTAC 3 cut(s) 123, 1124, 1144
DdeI CTNAG 4 cut(s) 907, 1095, 1202, 1208
DpnI GATC 1 cut(s) 305
DpnII GATC 1 cut(s) 303
Eam1104I CTCTTC 2 cut(s) 974, 1038
EarI CTCTTC 2 cut(s) 974, 1038
Eco130I CCWWGG 2 cut(s) 992, 1147
Eco32I GATATC 1 cut(s) 1112
Eco47I GGWCC 1 cut(s) 1238
Eco47III AGCGCT 1 cut(s) 270
Eco57I CTGAAG 3 cut(s) 667, 829, 1059
Eco88I CYCGRG 1 cut(s) 374
EcoRI GAATTC 1 cut(s) 677
EcoRII CCWGG 3 cut(s) 174, 351, 953
EcoRV GATATC 1 cut(s) 1112
EcoT14I CCWWGG 2 cut(s) 992, 1147
EcoT22I ATGCAT 2 cut(s) 756, 760
ErhI CCWWGG 2 cut(s) 992, 1147
Esp3I CGTCTC 1 cut(s) 767
FaeI CATG 8 cut(s) 80, 189, 335, 549, 616, 754, 758, 783
FaqI GGGAC 1 cut(s) 1224
FatI CATG 8 cut(s) 76, 185, 331, 545, 612, 750, 754, 779
Fnu4HI GCNGC 7 cut(s) 6, 142, 145, 148, 207, 1199, 1248
FokI GGATG 4 cut(s) 16, 205, 840, 974
Fsp4HI GCNGC 7 cut(s) 6, 142, 145, 148, 207, 1199, 1248
FspBI CTAG 1 cut(s) 1299
GlaI GCGC 3 cut(s) 270, 539, 1222
GluI GCNGC 7 cut(s) 6, 142, 145, 148, 207, 1199, 1248
HaeII RGCGCY 2 cut(s) 272, 1224
HaeIII GGCC 1 cut(s) 749
HapII CCGG 1 cut(s) 1251
HhaI GCGC 3 cut(s) 271, 540, 1223
Hin1II CATG 8 cut(s) 80, 189, 335, 549, 616, 754, 758, 783
Hin6I GCGC 3 cut(s) 269, 538, 1221
HinP1I GCGC 3 cut(s) 269, 538, 1221
HincII GTYRAC 2 cut(s) 181, 689
HindII GTYRAC 2 cut(s) 181, 689
HindIII AAGCTT 1 cut(s) 233
HinfI GANTC 5 cut(s) 43, 89, 257, 984, 1204
HpaI GTTAAC 1 cut(s) 181
HpaII CCGG 1 cut(s) 1251
HphI GGTGA 1 cut(s) 710
Hpy166II GTNNAC 4 cut(s) 181, 689, 913, 1144
Hpy188I TCNGA 9 cut(s) 23, 154, 276, 295, 511, 823, 1078, 1209, 1282
Hpy188III TCNNGA 8 cut(s) 247, 571, 765, 794, 836, 1090, 1166, 1241
Hpy8I GTNNAC 4 cut(s) 181, 689, 913, 1144
Hpy99I CGWCG 2 cut(s) 527, 1269
HpyAV CCTTC 6 cut(s) 496, 511, 853, 1083, 1211, 1304
HpyCH4III ACNGT 2 cut(s) 166, 1185
HpyCH4IV ACGT 1 cut(s) 1267
HpyCH4V TGCA 7 cut(s) 57, 80, 416, 745, 754, 758, 944
HpyF10VI GCNNNNNNNGC 5 cut(s) 147, 215, 751, 755, 1198
HpyF3I CTNAG 4 cut(s) 907, 1095, 1202, 1208
HpySE526I ACGT 1 cut(s) 1267
Hsp92II CATG 8 cut(s) 80, 189, 335, 549, 616, 754, 758, 783
HspAI GCGC 3 cut(s) 269, 538, 1221
KspAI GTTAAC 1 cut(s) 181
Kzo9I GATC 1 cut(s) 303
LmnI GCTCC 2 cut(s) 155, 392
Lsp1109I GCAGC 5 cut(s) 17, 153, 156, 159, 1185
LweI GCATC 6 cut(s) 38, 227, 438, 570, 829, 862
MabI ACCWGGT 1 cut(s) 174
MaeI CTAG 1 cut(s) 1299
MaeII ACGT 1 cut(s) 1267
MaeIII GTNAC 2 cut(s) 930, 965
MalI GATC 1 cut(s) 305
MboI GATC 1 cut(s) 303
MfeI CAATTG 1 cut(s) 1130
MflI RGATCY 1 cut(s) 303
MhlI GDGCHC 2 cut(s) 389, 507
MluCI AATT 7 cut(s) 61, 287, 468, 605, 677, 1011, 1130
MlyI GAGTC 3 cut(s) 37, 251, 1213
MnlI CCTC 8 cut(s) 487, 694, 735, 790, 801, 820, 1033, 1137
Mph1103I ATGCAT 2 cut(s) 756, 760
MroXI GAANNNNTTC 1 cut(s) 1085
MseI TTAA 1 cut(s) 180
MslI CAYNNNNRTG 2 cut(s) 330, 395
MspA1I CMGCKG 1 cut(s) 859
MspI CCGG 1 cut(s) 1251
MspR9I CCNGG 3 cut(s) 176, 353, 955
MunI CAATTG 1 cut(s) 1130
MvaI CCWGG 3 cut(s) 176, 353, 955
MwoI GCNNNNNNNGC 5 cut(s) 147, 215, 751, 755, 1198
NdeII GATC 1 cut(s) 303
NlaIII CATG 8 cut(s) 80, 189, 335, 549, 616, 754, 758, 783
NlaIV GGNNCC 1 cut(s) 1240
NmuCI GTSAC 1 cut(s) 930
NsiI ATGCAT 2 cut(s) 756, 760
NspI RCATGY 3 cut(s) 335, 616, 758
PaeI GCATGC 2 cut(s) 616, 758
PaeR7I CTCGAG 1 cut(s) 374
PciI ACATGT 1 cut(s) 331
PdmI GAANNNNTTC 1 cut(s) 1085
PfeI GAWTC 2 cut(s) 89, 984
PflFI GACNNNGTC 1 cut(s) 1317
PkrI GCNGC 7 cut(s) 7, 143, 146, 149, 208, 1200, 1249
PleI GAGTC 3 cut(s) 37, 251, 1212
PpsI GAGTC 3 cut(s) 37, 251, 1212
PscI ACATGT 1 cut(s) 331
Psp6I CCWGG 3 cut(s) 174, 351, 953
PspGI CCWGG 3 cut(s) 174, 351, 953
PspN4I GGNNCC 1 cut(s) 1240
PspPI GGNCC 1 cut(s) 1238
PspXI VCTCGAGB 1 cut(s) 374
PstNI CAGNNNCTG 1 cut(s) 86
PsuI RGATCY 1 cut(s) 303
PsyI GACNNNGTC 1 cut(s) 1317
RsaI GTAC 3 cut(s) 124, 1125, 1145
RsaNI GTAC 3 cut(s) 123, 1124, 1144
RseI CAYNNNNRTG 2 cut(s) 330, 395
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 7 cut(s) 6, 142, 145, 148, 207, 1199, 1248
Sau3AI GATC 1 cut(s) 303
Sau96I GGNCC 1 cut(s) 1238
SchI GAGTC 3 cut(s) 37, 251, 1213
ScrFI CCNGG 3 cut(s) 176, 353, 955
SduI GDGCHC 2 cut(s) 389, 507
SexAI ACCWGGT 1 cut(s) 174
SfaNI GCATC 6 cut(s) 38, 227, 438, 570, 829, 862
Sfr274I CTCGAG 1 cut(s) 374
SgrAI CRCCGGYG 1 cut(s) 1250
SinI GGWCC 1 cut(s) 1238
SlaI CTCGAG 1 cut(s) 374
SmiMI CAYNNNNRTG 2 cut(s) 330, 395
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
SphI GCATGC 2 cut(s) 616, 758
Sse9I AATT 7 cut(s) 61, 287, 468, 605, 677, 1011, 1130
SsiI CCGC 4 cut(s) 207, 319, 857, 1248
SspI AATATT 2 cut(s) 39, 589
SspMI CTAG 1 cut(s) 1299
StyD4I CCNGG 3 cut(s) 174, 351, 953
StyI CCWWGG 2 cut(s) 992, 1147
TaaI ACNGT 2 cut(s) 166, 1185
TaiI ACGT 1 cut(s) 1270
TaqI TCGA 5 cut(s) 246, 375, 408, 525, 734
TasI AATT 7 cut(s) 61, 287, 468, 605, 677, 1011, 1130
TatI WGTACW 1 cut(s) 122
TauI GCSGC 2 cut(s) 209, 1250
TfiI GAWTC 2 cut(s) 89, 984
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TscAI CASTG 2 cut(s) 119, 429
TseFI GTSAC 1 cut(s) 930
TseI GCWGC 5 cut(s) 5, 141, 144, 147, 1198
Tsp45I GTSAC 1 cut(s) 930
TspDTI ATGAA 6 cut(s) 300, 680, 884, 1049, 1070, 1190
TspGWI ACGGA 3 cut(s) 228, 250, 991
TspRI CASTG 2 cut(s) 119, 429
Tth111I GACNNNGTC 1 cut(s) 1317
VpaK11BI GGWCC 1 cut(s) 1238
XapI RAATTY 3 cut(s) 287, 677, 1011
XceI RCATGY 3 cut(s) 335, 616, 758
XcmI CCANNNNNNNNNTGG 1 cut(s) 22
XhoI CTCGAG 1 cut(s) 374
XmnI GAANNNNTTC 1 cut(s) 1085
XspI CTAG 1 cut(s) 1299
Zsp2I ATGCAT 2 cut(s) 756, 760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.