Rroxscaffold_5G00333760
ERF Family

Mitochondrial transcription termination factor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000115
Physical Location & Seq
Reverse (-)
1133981 .. 1136901
2921 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00333760.1

Sequence Viewer

Length: 1194 bp
ATGGTGGTGGCGCTCAGATTAGGGTACCCAATTATCTGTAGATTGGTTTCTTCCAGGACCAAAAGTTTGGGTCTTGGAAATCTAAAACCCTCCAATTTTTCTCTTCAGAATCAGTTGCTTCACAGACCCATCAGCTCAGAAATCTCAAAGCAAGCCAATTTCACATTCACTTACCTCATAAACTCATGTGGGTTGTCCCCAGAAGATGCAAAGTTGGCAGCTAGTAAGGTAGAGTTGCAATCCCAAGAAGGAGCGGACTCTGTTTTGGCTCTTTTGAGCAGCCATGGCCTCTCTGAAACCCAGATCTCAAAGGTGGTTAAGTCACACCCAAGAGTCCTTTTAGCTGATCCTGAGAAAACCCTTTCACCCAAGATTGAGTTTTTCAGCTCTGTTGGGCTCTCAAGGGTGGACCTTGCCAGAGTTCTAAGTTTCAATCCACATCTTTTGTCAAGAAGCTTGGAGAATCAAATTGTGCCCTCTTATAATTTCCTCAGGAATATGATTTCCAAGGAGAATGTTGTGGCGGTTTTGAAGCGCAGGTCTTGGATGTTCTTGGAGAATCATTCCAGGAATGTGATGCCCAATATTGAGGCTTTGAGAGAGTTGGGTCAGGGGATGGGATTTGATTTGAAGAAGTCAACTTTCGTTGTAGCACTGAGAGCATTGTGTGGGAAGAGCAGTAGGGCCATATGGAATCGAAATCGCGAGATTTACAAGAGGAGTTGGGGTTGGTCTGATGATGATGTTATCTCTGCTTTTAGGAAGAGCCCTCAGTGTATGATTTTGTCTGAGAAGAAGATTATGCGGACAATGGATTTTCTGGTGAATAAGATGGGATGGTCTGCATCAATGATTCCCACATATCCTGTAATTTTGTGTTTCAGTTTGGAGAATAGGATCATCCCGAGGTGTTCGGTTGTCAAAGTTTTGATGAAGAAAGGATTGGTAGATGAAAATGTGAGTCTGGCTTATGCGGTGCTGCCTGCAGAGAAGCAATTCTTGGAGAGGTTTGTGACCAGATATCTCAGCCAAGTGCCTAACCTGTTGAGTGTGTATGAAGGGGAACTTGATTTGCAGGATTCATTGGAGTGCTGGAACATGGCTGGCAGAAGTGCACGAAGATTCAATATCAGCCTTTGCACGGTCACCAGTTCATTGATTACAGTGAGTGTCACCTCAGCCAGTTATGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

397

Amino Acids

44.58

Weight (kDa)

9.62

Isoelectric Point (pI)

52.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 89 - 203 4e-19 mTERF
mTERF PF02536 240 - 333 7.8e-17 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 483
Acc36I ACCTGC 1 cut(s) 528
Acc65I GGTACC 1 cut(s) 24
AccB1I GGYRCC 1 cut(s) 24
AccBSI CCGCTC 1 cut(s) 254
AccII CGCG 1 cut(s) 705
AciI CCGC 4 cut(s) 254, 524, 805, 974
AclWI GGATC 2 cut(s) 341, 905
AcuI CTGAAG 1 cut(s) 89
AfaI GTAC 1 cut(s) 26
AfiI CCNNNNNNNGG 1 cut(s) 1141
AgsI TTSAA 4 cut(s) 433, 532, 631, 1126
AjnI CCWGG 2 cut(s) 53, 566
AjuI GAANNNNNNNTTGG 6 cut(s) 149, 181, 926, 958, 983, 1015
AluBI AGCT 5 cut(s) 135, 221, 344, 387, 456
AluI AGCT 5 cut(s) 135, 221, 344, 387, 456
Alw21I GWGCWC 1 cut(s) 1117
Alw44I GTGCAC 1 cut(s) 1113
AlwI GGATC 2 cut(s) 341, 905
Ama87I CYCGRG 1 cut(s) 904
AoxI GGCC 2 cut(s) 286, 684
ApaLI GTGCAC 1 cut(s) 1113
ApeKI GCWGC 3 cut(s) 218, 279, 979
ArsI GACNNNNNNTTYG 2 cut(s) 49, 81
Asp700I GAANNNNTTC 1 cut(s) 995
Asp718I GGTACC 1 cut(s) 24
AspLEI GCGC 2 cut(s) 13, 537
AspS9I GGNCC 3 cut(s) 57, 409, 684
AsuHPI GGTGA 4 cut(s) 357, 835, 1138, 1165
AvaI CYCGRG 1 cut(s) 904
AvaII GGWCC 2 cut(s) 57, 409
AxyI CCTNAGG 1 cut(s) 491
BaeGI GKGCMC 2 cut(s) 477, 1117
BanI GGYRCC 1 cut(s) 24
BanII GRGCYC 2 cut(s) 399, 770
Bbv12I GWGCWC 1 cut(s) 1117
BbvCI CCTCAGC 1 cut(s) 1177
BbvI GCAGC 3 cut(s) 230, 291, 966
BccI CCATC 4 cut(s) 137, 610, 826, 831
BciT130I CCWGG 2 cut(s) 55, 568
BfaI CTAG 1 cut(s) 222
BfmI CTRYAG 2 cut(s) 37, 984
BfoI RGCGCY 1 cut(s) 14
BfuAI ACCTGC 1 cut(s) 528
BglII AGATCT 1 cut(s) 303
BisI GCNGC 3 cut(s) 219, 280, 980
BlsI GCNGC 3 cut(s) 220, 281, 981
Bme1390I CCNGG 2 cut(s) 55, 568
Bme18I GGWCC 2 cut(s) 57, 409
BmeT110I CYCGRG 1 cut(s) 904
BmgT120I GGNCC 3 cut(s) 57, 409, 684
BmiI GGNNCC 1 cut(s) 26
BmrFI CCNGG 2 cut(s) 55, 568
BmsI GCATC 3 cut(s) 196, 567, 854
Bpu10I CCTNAGC 1 cut(s) 1177
BpuEI CTTGAG 1 cut(s) 385
BsaJI CCNNGG 3 cut(s) 283, 507, 905
BsaXI ACNNNNNCTCC 2 cut(s) 712, 742
Bsc4I CCNNNNNNNGG 1 cut(s) 1141
Bse1I ACTGG 2 cut(s) 1149, 1182
Bse21I CCTNAGG 1 cut(s) 491
BseBI CCWGG 2 cut(s) 55, 568
BseDI CCNNGG 3 cut(s) 283, 507, 905
BseGI GGATG 4 cut(s) 552, 621, 842, 900
BseLI CCNNNNNNNGG 1 cut(s) 1141
BseMII CTCAG 9 cut(s) 28, 150, 342, 505, 647, 780, 785, 1039, 1191
BseNI ACTGG 2 cut(s) 1149, 1182
BseRI GAGGAG 1 cut(s) 733
BseSI GKGCMC 2 cut(s) 477, 1117
BseXI GCAGC 3 cut(s) 230, 291, 966
Bsh1236I CGCG 1 cut(s) 705
BshFI GGCC 2 cut(s) 288, 686
BshNI GGYRCC 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 1117
BsiHKCI CYCGRG 1 cut(s) 904
BslFI GGGAC 1 cut(s) 181
BslI CCNNNNNNNGG 1 cut(s) 1141
BsmFI GGGAC 1 cut(s) 181
BsnI GGCC 2 cut(s) 288, 686
BsoBI CYCGRG 1 cut(s) 904
Bsp1286I GDGCHC 4 cut(s) 399, 477, 770, 1117
Bsp143I GATC 3 cut(s) 303, 346, 897
Bsp19I CCATGG 1 cut(s) 283
Bsp68I TCGCGA 1 cut(s) 705
BspACI CCGC 4 cut(s) 254, 524, 805, 974
BspANI GGCC 2 cut(s) 288, 686
BspCNI CTCAG 9 cut(s) 27, 149, 343, 504, 648, 781, 784, 1038, 1190
BspFNI CGCG 1 cut(s) 705
BspLI GGNNCC 1 cut(s) 26
BspMAI CTGCAG 1 cut(s) 988
BspMI ACCTGC 1 cut(s) 528
BspPI GGATC 2 cut(s) 341, 905
BspQI GCTCTTC 2 cut(s) 668, 758
BspT107I GGYRCC 1 cut(s) 24
BsrBI CCGCTC 1 cut(s) 254
BsrI ACTGG 2 cut(s) 1149, 1182
BssECI CCNNGG 3 cut(s) 283, 507, 905
BssMI GATC 3 cut(s) 303, 346, 897
BssT1I CCWWGG 2 cut(s) 283, 507
Bst2UI CCWGG 2 cut(s) 55, 568
Bst4CI ACNGT 2 cut(s) 1144, 1165
Bst6I CTCTTC 3 cut(s) 108, 668, 758
BstC8I GCNNGC 3 cut(s) 153, 984, 1105
BstDSI CCRYGG 1 cut(s) 283
BstEII GGTNACC 1 cut(s) 1144
BstF5I GGATG 4 cut(s) 552, 621, 842, 900
BstFNI CGCG 1 cut(s) 705
BstH2I RGCGCY 1 cut(s) 14
BstHHI GCGC 2 cut(s) 13, 537
BstKTI GATC 3 cut(s) 306, 349, 900
BstMBI GATC 3 cut(s) 303, 346, 897
BstMWI GCNNNNNNNGC 3 cut(s) 215, 285, 659
BstNI CCWGG 2 cut(s) 55, 568
BstPI GGTNACC 1 cut(s) 1144
BstSCI CCNGG 2 cut(s) 53, 566
BstSFI CTRYAG 2 cut(s) 37, 984
BstSLI GKGCMC 2 cut(s) 477, 1117
BstUI CGCG 1 cut(s) 705
BstV1I GCAGC 3 cut(s) 230, 291, 966
BstX2I RGATCY 1 cut(s) 303
BstXI CCANNNNNNTGG 1 cut(s) 67
BstYI RGATCY 1 cut(s) 303
Bsu36I CCTNAGG 1 cut(s) 491
BsuRI GGCC 2 cut(s) 288, 686
BtgI CCRYGG 1 cut(s) 283
BtsCI GGATG 4 cut(s) 552, 621, 842, 900
BtsIMutI CAGTG 3 cut(s) 653, 779, 1170
BtuMI TCGCGA 1 cut(s) 705
BveI ACCTGC 1 cut(s) 528
Cac8I GCNNGC 3 cut(s) 153, 984, 1105
CfoI GCGC 2 cut(s) 13, 537
Cfr13I GGNCC 3 cut(s) 57, 409, 684
Csp6I GTAC 1 cut(s) 25
CspCI CAANNNNNGTGG 2 cut(s) 426, 461
CviAII CATG 3 cut(s) 186, 284, 1099
CviQI GTAC 1 cut(s) 25
DpnI GATC 3 cut(s) 305, 348, 899
DpnII GATC 3 cut(s) 303, 346, 897
Eam1104I CTCTTC 3 cut(s) 108, 668, 758
EarI CTCTTC 3 cut(s) 108, 668, 758
Eco130I CCWWGG 2 cut(s) 283, 507
Eco24I GRGCYC 2 cut(s) 399, 770
Eco32I GATATC 1 cut(s) 1022
Eco47I GGWCC 2 cut(s) 57, 409
Eco57I CTGAAG 1 cut(s) 89
Eco81I CCTNAGG 1 cut(s) 491
Eco88I CYCGRG 1 cut(s) 904
Eco91I GGTNACC 1 cut(s) 1144
EcoO65I GGTNACC 1 cut(s) 1144
EcoRII CCWGG 2 cut(s) 53, 566
EcoRV GATATC 1 cut(s) 1022
EcoT14I CCWWGG 2 cut(s) 283, 507
EcoT38I GRGCYC 2 cut(s) 399, 770
ErhI CCWWGG 2 cut(s) 283, 507
FaeI CATG 3 cut(s) 189, 287, 1102
FalI AAGNNNNNCTT 4 cut(s) 983, 1015, 1050, 1082
FaqI GGGAC 1 cut(s) 181
FatI CATG 3 cut(s) 185, 283, 1098
FauNDI CATATG 1 cut(s) 689
Fnu4HI GCNGC 3 cut(s) 219, 280, 980
FokI GGATG 4 cut(s) 559, 628, 849, 887
FriOI GRGCYC 2 cut(s) 399, 770
Fsp4HI GCNGC 3 cut(s) 219, 280, 980
FspBI CTAG 1 cut(s) 222
GlaI GCGC 2 cut(s) 12, 536
GluI GCNGC 3 cut(s) 219, 280, 980
HaeII RGCGCY 1 cut(s) 14
HaeIII GGCC 2 cut(s) 288, 686
HhaI GCGC 2 cut(s) 13, 537
Hin1II CATG 3 cut(s) 189, 287, 1102
Hin6I GCGC 2 cut(s) 11, 535
HinP1I GCGC 2 cut(s) 11, 535
HincII GTYRAC 1 cut(s) 639
HindII GTYRAC 1 cut(s) 639
HindIII AAGCTT 1 cut(s) 454
HphI GGTGA 4 cut(s) 357, 835, 1138, 1165
Hpy166II GTNNAC 3 cut(s) 409, 639, 1115
Hpy188I TCNGA 6 cut(s) 17, 108, 139, 295, 736, 790
Hpy188III TCNNGA 5 cut(s) 350, 450, 493, 704, 904
Hpy8I GTNNAC 3 cut(s) 409, 639, 1115
HpyAV CCTTC 2 cut(s) 242, 1052
HpyCH4III ACNGT 2 cut(s) 1144, 1165
HpyCH4V TGCA 7 cut(s) 209, 238, 845, 986, 1075, 1115, 1140
HpyF10VI GCNNNNNNNGC 3 cut(s) 215, 285, 659
Hsp92II CATG 3 cut(s) 189, 287, 1102
HspAI GCGC 2 cut(s) 11, 535
KpnI GGTACC 1 cut(s) 28
Kzo9I GATC 3 cut(s) 303, 346, 897
LguI GCTCTTC 2 cut(s) 668, 758
LmnI GCTCC 1 cut(s) 251
Lsp1109I GCAGC 3 cut(s) 230, 291, 966
LweI GCATC 3 cut(s) 196, 567, 854
MaeI CTAG 1 cut(s) 222
MaeIII GTNAC 4 cut(s) 321, 1012, 1144, 1171
MalI GATC 3 cut(s) 305, 348, 899
MbiI CCGCTC 1 cut(s) 254
MboI GATC 3 cut(s) 303, 346, 897
MflI RGATCY 1 cut(s) 303
MhlI GDGCHC 4 cut(s) 399, 477, 770, 1117
MluCI AATT 7 cut(s) 30, 94, 157, 468, 484, 870, 995
MlyI GAGTC 3 cut(s) 251, 342, 970
MroXI GAANNNNTTC 1 cut(s) 995
MseI TTAA 1 cut(s) 318
MslI CAYNNNNRTG 1 cut(s) 1087
MspR9I CCNGG 2 cut(s) 55, 568
MvaI CCWGG 2 cut(s) 55, 568
MvnI CGCG 1 cut(s) 705
MwoI GCNNNNNNNGC 3 cut(s) 215, 285, 659
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 1 cut(s) 689
NdeII GATC 3 cut(s) 303, 346, 897
NlaIII CATG 3 cut(s) 189, 287, 1102
NlaIV GGNNCC 1 cut(s) 26
NmuCI GTSAC 4 cut(s) 321, 1012, 1144, 1171
NruI TCGCGA 1 cut(s) 705
PciSI GCTCTTC 2 cut(s) 668, 758
PdmI GAANNNNTTC 1 cut(s) 995
PfeI GAWTC 7 cut(s) 109, 463, 559, 694, 853, 1079, 1122
PfoI TCCNGGA 2 cut(s) 53, 566
PkrI GCNGC 3 cut(s) 220, 281, 981
PleI GAGTC 3 cut(s) 251, 341, 969
PpsI GAGTC 3 cut(s) 251, 341, 969
PsiI TTATAA 1 cut(s) 483
Psp6I CCWGG 2 cut(s) 53, 566
PspEI GGTNACC 1 cut(s) 1144
PspGI CCWGG 2 cut(s) 53, 566
PspN4I GGNNCC 1 cut(s) 26
PspPI GGNCC 3 cut(s) 57, 409, 684
PstI CTGCAG 1 cut(s) 988
PsuI RGATCY 1 cut(s) 303
RruI TCGCGA 1 cut(s) 705
RsaI GTAC 1 cut(s) 26
RsaNI GTAC 1 cut(s) 25
RseI CAYNNNNRTG 1 cut(s) 1087
SapI GCTCTTC 2 cut(s) 668, 758
SaqAI TTAA 1 cut(s) 318
SatI GCNGC 3 cut(s) 219, 280, 980
Sau3AI GATC 3 cut(s) 303, 346, 897
Sau96I GGNCC 3 cut(s) 57, 409, 684
SchI GAGTC 3 cut(s) 251, 342, 970
ScrFI CCNGG 2 cut(s) 55, 568
SduI GDGCHC 4 cut(s) 399, 477, 770, 1117
SfaNI GCATC 3 cut(s) 196, 567, 854
SfcI CTRYAG 2 cut(s) 37, 984
SinI GGWCC 2 cut(s) 57, 409
SmiMI CAYNNNNRTG 1 cut(s) 1087
SmlI CTYRAG 1 cut(s) 400
SmoI CTYRAG 1 cut(s) 400
Sse9I AATT 7 cut(s) 30, 94, 157, 468, 484, 870, 995
SsiI CCGC 4 cut(s) 254, 524, 805, 974
SspI AATATT 1 cut(s) 586
SspMI CTAG 1 cut(s) 222
StyD4I CCNGG 2 cut(s) 53, 566
StyI CCWWGG 2 cut(s) 283, 507
TaaI ACNGT 2 cut(s) 1144, 1165
TaqI TCGA 1 cut(s) 697
TasI AATT 7 cut(s) 30, 94, 157, 468, 484, 870, 995
TfiI GAWTC 7 cut(s) 109, 463, 559, 694, 853, 1079, 1122
Tru1I TTAA 1 cut(s) 318
Tru9I TTAA 1 cut(s) 318
TscAI CASTG 3 cut(s) 660, 779, 1170
TseFI GTSAC 4 cut(s) 321, 1012, 1144, 1171
TseI GCWGC 3 cut(s) 218, 279, 979
Tsp45I GTSAC 4 cut(s) 321, 1012, 1144, 1171
TspDTI ATGAA 5 cut(s) 947, 966, 1071, 1071, 1143
TspRI CASTG 3 cut(s) 660, 779, 1170
VneI GTGCAC 1 cut(s) 1113
VpaK11BI GGWCC 2 cut(s) 57, 409
XmnI GAANNNNTTC 1 cut(s) 995
XspI CTAG 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.