Rmu_sc0001788.1_g000004
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001788.1
OG0000115
Physical Location & Seq
Reverse (-)
20466 .. 25308
4843 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001788.1_g000004.1.cds

Sequence Viewer

Length: 1899 bp
atgaaaagacggtgttcgctgttgcagctgagtctgactagagaaggcgctggaaaacaaggtggtcccgaagccgccggtggaaaacaacgacgtggtgggagttccgaagaatggggtggaactaggagtgaagaaggacggggtcgtcgacggagtgccgaaggctgcagcctggaaaatgggcacccagtcgggggaatggcttcgcattttggtcctcaaaagcagttgttttgtacaagactcaccggcaggtccgaaatcccagccggccaagatgattctacagtctcctacctggttaactcgtgtgggttgtccccagaatccgctactctagtatcccacacggtaaagcttcaatcttttgagaaaccagactccgttttggcgcttttgaaacgctatgaattctcagaggcccagatttcaaaggttgtgcggagactcccacatattcttttggccgatgtggagcaaacccttttgccaaacctcgagttttactgctccataggaatgtcaaggctccaccttgcaagaacactgagctacaacccatggctcatgagtctaagcttgaaaaaccatattgtaccaacttatagcttcttcaagagcgtggtgctctctgatgtcaaagtgatccatattttgaagcacaagtcctggattttcagggaaaatttatccaagaatttgatacccaatattgagcttgtgagagaattgggcattccccagtcctgtattgccctcttgctaactagttatactgatgtagtgatgaaaaagcctgaattgttcagtcaacttgtgcatcaagtcacagaaatgggatttgaccctcaaaatttgagctttgtgcaggccatacacgcattatatgggaaagagacgacatggaaacgatgtcaagaggtttataggaggtggggttggtctgagaatcatatacattctgctttcagggtgtctccactgtgtatggttatgtcagaggagaaactaatggcaacaatggatttcttagtgaacaagatggggtggcagtcacaaacaattgcgaaatatccccatgttttgagttacagcttgcagaagagattcatcccgaggttttcagttgttcgagttttgtttttgaaaggattgatagaagaggagaacttgagtttggctactgggatttcaaagtcagagaagtacttcttggataggccagcggtttggagaaggaagtctgcaaaggaacgtgggcgacgtcagcaaaacaggggagaaggagacgcgccagcttgggaagtgagggacaaaccattgacgcgtggcgccgcaattgttgatgggggagtttgttctccagatcgaaggtttcggtgtccggtggcagggattgttgctgtggtgggggatcaagcctctcaagcttggttatttgcgtggatgaccttttcacttgccccctttctgattcttggtgcactattgatatatgtcacacatgcaatgagtaccattgcttcatcatttgttcaggtcggtattgaggttgacaagtacgtcaatgttcaacctttaacagttattgctaagatcactgcttttccttattttccttccattgcaatgacatttctgagcttggatcctggggatcctaacatgggtattgtaccgttctggcagaacgatgtggcgggtcgaatggaaggccagatccgaggtggtgctctgcagtggttgcacgaagatggtggatgcgagttgatctacagtggttcagagatgggagaatttccagttctgatcggggcgtggtggctagtagtacagcgtcttgggacaattggtatggcggagcagtggtcggggactatcttttgcaggtcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

632

Amino Acids

70.77

Weight (kDa)

9.17

Isoelectric Point (pI)

56.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 147, 1565
AatII GACGTC 1 cut(s) 1270
Acc36I ACCTGC 2 cut(s) 246, 1881
AccB1I GGYRCC 2 cut(s) 186, 1334
AccI GTMKAC 1 cut(s) 151
AccII CGCG 2 cut(s) 1295, 1330
AciI CCGC 7 cut(s) 75, 333, 445, 1229, 1338, 1703, 1862
AclWI GGATC 7 cut(s) 643, 1425, 1646, 1655, 1659, 1668, 1717
AcoI YGGCCR 2 cut(s) 274, 468
AcsI RAATTY 5 cut(s) 413, 688, 700, 856, 1799
AcyI GRCGYC 2 cut(s) 1267, 1335
AfaI GTAC 7 cut(s) 241, 600, 1211, 1519, 1565, 1680, 1836
AfiI CCNNNNNNNGG 5 cut(s) 114, 196, 197, 1394, 1670
AflIII ACRYGT 1 cut(s) 1328
AgsI TTSAA 9 cut(s) 365, 403, 435, 586, 619, 661, 1150, 1197, 1577
AhlI ACTAGT 1 cut(s) 770
AjiI CACGTC 1 cut(s) 95
AjnI CCWGG 4 cut(s) 174, 300, 671, 1654
AjuI GAANNNNNNNTTGG 4 cut(s) 1163, 1195, 1199, 1231
Alw21I GWGCWC 3 cut(s) 633, 1489, 1738
Alw26I GTCTC 5 cut(s) 298, 442, 893, 984, 1284
Alw44I GTGCAC 1 cut(s) 1485
AlwI GGATC 7 cut(s) 643, 1425, 1646, 1655, 1659, 1668, 1717
Ama87I CYCGRG 2 cut(s) 500, 1117
AoxI GGCC 6 cut(s) 274, 423, 468, 873, 1223, 1717
ApaLI GTGCAC 1 cut(s) 1485
ApeKI GCWGC 3 cut(s) 25, 168, 171
ApoI RAATTY 5 cut(s) 413, 688, 700, 856, 1799
Asp700I GAANNNNTTC 3 cut(s) 205, 1109, 1211
AspLEI GCGC 4 cut(s) 50, 397, 1297, 1337
AspS9I GGNCC 4 cut(s) 65, 218, 258, 424
AsuHPI GGTGA 1 cut(s) 241
AvaI CYCGRG 2 cut(s) 500, 1117
AvaII GGWCC 3 cut(s) 65, 218, 258
BaeGI GKGCMC 2 cut(s) 189, 1489
BaeI ACNNNNGTAYC 2 cut(s) 327, 360
BamHI GGATCC 2 cut(s) 1651, 1660
BanI GGYRCC 2 cut(s) 186, 1334
BarI GAAGNNNNNNTAC 2 cut(s) 1510, 1542
BauI CACGAG 1 cut(s) 310
Bbv12I GWGCWC 3 cut(s) 633, 1489, 1738
BbvI GCAGC 3 cut(s) 37, 155, 183
BccI CCATC 4 cut(s) 1039, 1343, 1751, 1786
BciT130I CCWGG 4 cut(s) 176, 302, 673, 1656
BciVI GTATCC 1 cut(s) 355
BcoDI GTCTC 5 cut(s) 298, 442, 893, 984, 1284
BcuI ACTAGT 1 cut(s) 770
BfaI CTAG 5 cut(s) 39, 126, 341, 771, 1829
BfmI CTRYAG 4 cut(s) 169, 288, 1739, 1777
BfoI RGCGCY 3 cut(s) 51, 398, 1338
BfuAI ACCTGC 2 cut(s) 246, 1881
BfuI GTATCC 1 cut(s) 355
BisI GCNGC 5 cut(s) 26, 75, 169, 172, 1338
BlsI GCNGC 5 cut(s) 27, 76, 170, 173, 1339
BmcAI AGTACT 1 cut(s) 1211
Bme1390I CCNGG 4 cut(s) 176, 302, 673, 1656
Bme18I GGWCC 3 cut(s) 65, 218, 258
BmeT110I CYCGRG 2 cut(s) 500, 1117
BmgBI CACGTC 1 cut(s) 95
BmgT120I GGNCC 4 cut(s) 65, 218, 258, 424
BmiI GGNNCC 6 cut(s) 67, 188, 533, 1336, 1653, 1662
BmrFI CCNGG 4 cut(s) 176, 302, 673, 1656
BmrI ACTGGG 3 cut(s) 185, 739, 1197
BmsI GCATC 2 cut(s) 832, 1754
BmuI ACTGGG 3 cut(s) 185, 739, 1197
BpmI CTGGAG 1 cut(s) 1350
BpuEI CTTGAG 2 cut(s) 1195, 1413
BsaHI GRCGYC 2 cut(s) 1267, 1335
BsaJI CCNNGG 4 cut(s) 563, 1118, 1655, 1726
BsaWI WCCGGW 1 cut(s) 1387
BsaXI ACNNNNNCTCC 4 cut(s) 925, 955, 1856, 1886
Bsc4I CCNNNNNNNGG 5 cut(s) 114, 196, 197, 1394, 1670
Bse118I RCCGGY 3 cut(s) 77, 251, 272
Bse1I ACTGG 4 cut(s) 191, 745, 1192, 1805
Bse3DI GCAATG 4 cut(s) 1518, 1521, 1626, 1638
BseBI CCWGG 4 cut(s) 176, 302, 673, 1656
BseDI CCNNGG 4 cut(s) 563, 1118, 1655, 1726
BseGI GGATG 3 cut(s) 1113, 1455, 1769
BseLI CCNNNNNNNGG 5 cut(s) 114, 196, 197, 1394, 1670
BseMI GCAATG 4 cut(s) 1518, 1521, 1626, 1638
BseMII CTCAG 5 cut(s) 20, 432, 542, 939, 1634
BseNI ACTGG 4 cut(s) 191, 745, 1192, 1805
BseRI GAGGAG 2 cut(s) 1019, 1181
BseSI GKGCMC 2 cut(s) 189, 1489
BseXI GCAGC 3 cut(s) 37, 155, 183
BseYI CCCAGC 1 cut(s) 268
BsgI GTGCAG 1 cut(s) 890
Bsh1236I CGCG 2 cut(s) 1295, 1330
BshFI GGCC 6 cut(s) 276, 425, 470, 875, 1225, 1719
BshNI GGYRCC 2 cut(s) 186, 1334
BsiHKAI GWGCWC 3 cut(s) 633, 1489, 1738
BsiHKCI CYCGRG 2 cut(s) 500, 1117
BsiSI CCGG 4 cut(s) 78, 252, 273, 1388
BslFI GGGAC 5 cut(s) 51, 307, 1328, 1861, 1891
BslI CCNNNNNNNGG 5 cut(s) 114, 196, 197, 1394, 1670
BsmAI GTCTC 5 cut(s) 298, 442, 893, 984, 1284
BsmBI CGTCTC 2 cut(s) 893, 1284
BsmFI GGGAC 5 cut(s) 51, 307, 1328, 1861, 1891
BsmI GAATGC 1 cut(s) 738
BsnI GGCC 6 cut(s) 276, 425, 470, 875, 1225, 1719
BsoBI CYCGRG 2 cut(s) 500, 1117
Bsp1286I GDGCHC 4 cut(s) 189, 633, 1489, 1738
Bsp1407I TGTACA 1 cut(s) 239
Bsp143I GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
Bsp19I CCATGG 1 cut(s) 563
BspACI CCGC 7 cut(s) 75, 333, 445, 1229, 1338, 1703, 1862
BspANI GGCC 6 cut(s) 276, 425, 470, 875, 1225, 1719
BspCNI CTCAG 5 cut(s) 21, 431, 543, 940, 1635
BspFNI CGCG 2 cut(s) 1295, 1330
BspHI TCATGA 1 cut(s) 570
BspLI GGNNCC 6 cut(s) 67, 188, 533, 1336, 1653, 1662
BspMAI CTGCAG 2 cut(s) 173, 1743
BspMI ACCTGC 2 cut(s) 246, 1881
BspPI GGATC 7 cut(s) 643, 1425, 1646, 1655, 1659, 1668, 1717
BspT107I GGYRCC 2 cut(s) 186, 1334
BsrDI GCAATG 4 cut(s) 1518, 1521, 1626, 1638
BsrFI RCCGGY 3 cut(s) 77, 251, 272
BsrGI TGTACA 1 cut(s) 239
BsrI ACTGG 4 cut(s) 191, 745, 1192, 1805
BssAI RCCGGY 3 cut(s) 77, 251, 272
BssECI CCNNGG 4 cut(s) 563, 1118, 1655, 1726
BssMI GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
BssNI GRCGYC 2 cut(s) 1267, 1335
BssSI CACGAG 1 cut(s) 310
BssT1I CCWWGG 1 cut(s) 563
Bst2BI CACGAG 1 cut(s) 310
Bst2UI CCWGG 4 cut(s) 176, 302, 673, 1656
Bst4CI ACNGT 7 cut(s) 12, 292, 355, 987, 1588, 1683, 1781
Bst6I CTCTTC 2 cut(s) 1100, 1158
BstACI GRCGYC 2 cut(s) 1267, 1335
BstAPI GCANNNNNTGC 1 cut(s) 1747
BstAUI TGTACA 1 cut(s) 239
BstC8I GCNNGC 5 cut(s) 274, 873, 1100, 1227, 1299
BstDEI CTNAG 8 cut(s) 29, 418, 551, 578, 948, 1033, 1596, 1643
BstDSI CCRYGG 1 cut(s) 563
BstF5I GGATG 3 cut(s) 1113, 1455, 1769
BstFNI CGCG 2 cut(s) 1295, 1330
BstH2I RGCGCY 3 cut(s) 51, 398, 1338
BstHHI GCGC 4 cut(s) 50, 397, 1297, 1337
BstKTI GATC 9 cut(s) 651, 1372, 1420, 1602, 1654, 1663, 1725, 1776, 1815
BstMAI GTCTC 5 cut(s) 298, 442, 893, 984, 1284
BstMBI GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
BstMWI GCNNNNNNNGC 5 cut(s) 25, 881, 1270, 1430, 1747
BstNI CCWGG 4 cut(s) 176, 302, 673, 1656
BstNSI RCATGY 1 cut(s) 1511
BstSCI CCNGG 4 cut(s) 174, 300, 671, 1654
BstSFI CTRYAG 4 cut(s) 169, 288, 1739, 1777
BstSLI GKGCMC 2 cut(s) 189, 1489
BstUI CGCG 2 cut(s) 1295, 1330
BstV1I GCAGC 3 cut(s) 37, 155, 183
BstX2I RGATCY 3 cut(s) 1651, 1660, 1722
BstXI CCANNNNNNTGG 1 cut(s) 1233
BstYI RGATCY 3 cut(s) 1651, 1660, 1722
BsuI GTATCC 1 cut(s) 355
BsuRI GGCC 6 cut(s) 276, 425, 470, 875, 1225, 1719
BtgI CCRYGG 1 cut(s) 563
BtrI CACGTC 1 cut(s) 95
BtsCI GGATG 3 cut(s) 1113, 1455, 1769
BtsI GCAGTG 3 cut(s) 1602, 1748, 1874
BtsIMutI CAGTG 6 cut(s) 548, 983, 1602, 1748, 1786, 1874
BveI ACCTGC 2 cut(s) 246, 1881
Cac8I GCNNGC 5 cut(s) 274, 873, 1100, 1227, 1299
CciI TCATGA 1 cut(s) 570
CfoI GCGC 4 cut(s) 50, 397, 1297, 1337
Cfr10I RCCGGY 3 cut(s) 77, 251, 272
Cfr13I GGNCC 4 cut(s) 65, 218, 258, 424
CseI GACGC 3 cut(s) 1301, 1336, 1829
CsiI ACCWGGT 1 cut(s) 300
Csp6I GTAC 7 cut(s) 240, 599, 1210, 1518, 1564, 1679, 1835
CviAII CATG 6 cut(s) 564, 571, 906, 1082, 1508, 1669
CviQI GTAC 7 cut(s) 240, 599, 1210, 1518, 1564, 1679, 1835
DdeI CTNAG 8 cut(s) 29, 418, 551, 578, 948, 1033, 1596, 1643
DinI GGCGCC 1 cut(s) 1336
DpnI GATC 9 cut(s) 650, 1371, 1419, 1601, 1653, 1662, 1724, 1775, 1814
DpnII GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
DrdI GACNNNNNNGTC 2 cut(s) 147, 1565
DseDI GACNNNNNNGTC 2 cut(s) 147, 1565
EaeI YGGCCR 2 cut(s) 274, 468
Eam1104I CTCTTC 2 cut(s) 1100, 1158
EarI CTCTTC 2 cut(s) 1100, 1158
EciI GGCGGA 1 cut(s) 1877
Eco130I CCWWGG 1 cut(s) 563
Eco47I GGWCC 3 cut(s) 65, 218, 258
Eco88I CYCGRG 2 cut(s) 500, 1117
EcoRI GAATTC 1 cut(s) 413
EcoRII CCWGG 4 cut(s) 174, 300, 671, 1654
EcoT14I CCWWGG 1 cut(s) 563
EgeI GGCGCC 1 cut(s) 1336
EheI GGCGCC 1 cut(s) 1336
ErhI CCWWGG 1 cut(s) 563
Esp3I CGTCTC 2 cut(s) 893, 1284
FaeI CATG 6 cut(s) 567, 574, 909, 1085, 1511, 1672
FalI AAGNNNNNCTT 2 cut(s) 1199, 1231
FaqI GGGAC 5 cut(s) 51, 307, 1328, 1861, 1891
FatI CATG 6 cut(s) 563, 570, 905, 1081, 1507, 1668
FauI CCCGC 1 cut(s) 1696
FblI GTMKAC 1 cut(s) 151
Fnu4HI GCNGC 5 cut(s) 26, 75, 169, 172, 1338
FokI GGATG 3 cut(s) 1100, 1462, 1776
Fsp4HI GCNGC 5 cut(s) 26, 75, 169, 172, 1338
FspBI CTAG 5 cut(s) 39, 126, 341, 771, 1829
GlaI GCGC 4 cut(s) 49, 396, 1296, 1336
GluI GCNGC 5 cut(s) 26, 75, 169, 172, 1338
GsaI CCCAGC 1 cut(s) 272
GsuI CTGGAG 1 cut(s) 1350
HaeII RGCGCY 3 cut(s) 51, 398, 1338
HaeIII GGCC 6 cut(s) 276, 425, 470, 875, 1225, 1719
HapII CCGG 4 cut(s) 78, 252, 273, 1388
HgaI GACGC 3 cut(s) 1301, 1336, 1829
HhaI GCGC 4 cut(s) 50, 397, 1297, 1337
Hin1I GRCGYC 2 cut(s) 1267, 1335
Hin1II CATG 6 cut(s) 567, 574, 909, 1085, 1511, 1672
Hin6I GCGC 4 cut(s) 48, 395, 1295, 1335
HinP1I GCGC 4 cut(s) 48, 395, 1295, 1335
HincII GTYRAC 4 cut(s) 152, 307, 815, 1558
HindII GTYRAC 4 cut(s) 152, 307, 815, 1558
HindIII AAGCTT 3 cut(s) 359, 580, 1431
HpaI GTTAAC 1 cut(s) 307
HpaII CCGG 4 cut(s) 78, 252, 273, 1388
HphI GGTGA 1 cut(s) 241
Hpy166II GTNNAC 6 cut(s) 152, 307, 815, 1039, 1487, 1558
Hpy188III TCNNGA 7 cut(s) 68, 571, 619, 920, 1117, 1367, 1896
Hpy8I GTNNAC 6 cut(s) 152, 307, 815, 1039, 1487, 1558
Hpy99I CGWCG 4 cut(s) 96, 153, 156, 1269
HpyAV CCTTC 8 cut(s) 38, 131, 158, 1233, 1280, 1368, 1632, 1709
HpyCH4III ACNGT 7 cut(s) 12, 292, 355, 987, 1588, 1683, 1781
HpyCH4IV ACGT 4 cut(s) 94, 1258, 1267, 1566
HpyF10VI GCNNNNNNNGC 5 cut(s) 25, 881, 1270, 1430, 1747
HpyF3I CTNAG 8 cut(s) 29, 418, 551, 578, 948, 1033, 1596, 1643
HpySE526I ACGT 4 cut(s) 94, 1258, 1267, 1566
Hsp92I GRCGYC 2 cut(s) 1267, 1335
Hsp92II CATG 6 cut(s) 567, 574, 909, 1085, 1511, 1672
HspAI GCGC 4 cut(s) 48, 395, 1295, 1335
KasI GGCGCC 1 cut(s) 1334
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
KspAI GTTAAC 1 cut(s) 307
Kzo9I GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
LmnI GCTCC 4 cut(s) 478, 518, 537, 1864
Lsp1109I GCAGC 3 cut(s) 37, 155, 183
LweI GCATC 2 cut(s) 832, 1754
MabI ACCWGGT 1 cut(s) 300
MaeI CTAG 5 cut(s) 39, 126, 341, 771, 1829
MaeII ACGT 4 cut(s) 94, 1258, 1267, 1566
MaeIII GTNAC 4 cut(s) 829, 1056, 1091, 1501
MalI GATC 9 cut(s) 650, 1371, 1419, 1601, 1653, 1662, 1724, 1775, 1814
MboI GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
MboII GAAGA 6 cut(s) 122, 146, 607, 1117, 1175, 1766
MfeI CAATTG 3 cut(s) 1065, 1341, 1851
MflI RGATCY 3 cut(s) 1651, 1660, 1722
MhlI GDGCHC 4 cut(s) 189, 633, 1489, 1738
MluI ACGCGT 1 cut(s) 1328
Mly113I GGCGCC 1 cut(s) 1335
MlyI GAGTC 5 cut(s) 40, 240, 377, 444, 583
MroNI GCCGGC 1 cut(s) 272
MroXI GAANNNNTTC 3 cut(s) 205, 1109, 1211
MseI TTAA 2 cut(s) 306, 1583
MslI CAYNNNNRTG 4 cut(s) 521, 836, 1631, 1755
MspA1I CMGCKG 2 cut(s) 28, 1229
MspI CCGG 4 cut(s) 78, 252, 273, 1388
MspR9I CCNGG 4 cut(s) 176, 302, 673, 1656
MunI CAATTG 3 cut(s) 1065, 1341, 1851
Mva1269I GAATGC 1 cut(s) 738
MvaI CCWGG 4 cut(s) 176, 302, 673, 1656
MvnI CGCG 2 cut(s) 1295, 1330
MwoI GCNNNNNNNGC 5 cut(s) 25, 881, 1270, 1430, 1747
NaeI GCCGGC 1 cut(s) 274
NarI GGCGCC 1 cut(s) 1335
NcoI CCATGG 1 cut(s) 563
NdeII GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
NgoMIV GCCGGC 1 cut(s) 272
NlaIII CATG 6 cut(s) 567, 574, 909, 1085, 1511, 1672
NlaIV GGNNCC 6 cut(s) 67, 188, 533, 1336, 1653, 1662
NmuCI GTSAC 3 cut(s) 829, 1056, 1501
NspI RCATGY 1 cut(s) 1511
PaeR7I CTCGAG 1 cut(s) 500
PagI TCATGA 1 cut(s) 570
PcsI WCGNNNNNNNCGW 2 cut(s) 148, 1264
PctI GAATGC 1 cut(s) 738
PdiI GCCGGC 1 cut(s) 274
PdmI GAANNNNTTC 3 cut(s) 205, 1109, 1211
PfeI GAWTC 5 cut(s) 284, 329, 952, 1110, 1477
PflFI GACNNNGTC 1 cut(s) 144
PfoI TCCNGGA 1 cut(s) 671
PkrI GCNGC 5 cut(s) 27, 76, 170, 173, 1339
PleI GAGTC 5 cut(s) 39, 240, 377, 444, 582
PluTI GGCGCC 1 cut(s) 1338
PpsI GAGTC 5 cut(s) 39, 240, 377, 444, 582
Psp6I CCWGG 4 cut(s) 174, 300, 671, 1654
PspFI CCCAGC 1 cut(s) 268
PspGI CCWGG 4 cut(s) 174, 300, 671, 1654
PspN4I GGNNCC 6 cut(s) 67, 188, 533, 1336, 1653, 1662
PspPI GGNCC 4 cut(s) 65, 218, 258, 424
PspXI VCTCGAGB 1 cut(s) 500
PstI CTGCAG 2 cut(s) 173, 1743
PsuI RGATCY 3 cut(s) 1651, 1660, 1722
PsyI GACNNNGTC 1 cut(s) 144
PvuII CAGCTG 1 cut(s) 28
RsaI GTAC 7 cut(s) 241, 600, 1211, 1519, 1565, 1680, 1836
RsaNI GTAC 7 cut(s) 240, 599, 1210, 1518, 1564, 1679, 1835
RseI CAYNNNNRTG 4 cut(s) 521, 836, 1631, 1755
SalI GTCGAC 1 cut(s) 150
SaqAI TTAA 2 cut(s) 306, 1583
SatI GCNGC 5 cut(s) 26, 75, 169, 172, 1338
Sau3AI GATC 9 cut(s) 648, 1369, 1417, 1599, 1651, 1660, 1722, 1773, 1812
Sau96I GGNCC 4 cut(s) 65, 218, 258, 424
ScaI AGTACT 1 cut(s) 1211
SchI GAGTC 5 cut(s) 40, 240, 377, 444, 583
ScrFI CCNGG 4 cut(s) 176, 302, 673, 1656
SduI GDGCHC 4 cut(s) 189, 633, 1489, 1738
SexAI ACCWGGT 1 cut(s) 300
SfaNI GCATC 2 cut(s) 832, 1754
SfcI CTRYAG 4 cut(s) 169, 288, 1739, 1777
SfoI GGCGCC 1 cut(s) 1336
Sfr274I CTCGAG 1 cut(s) 500
SgrAI CRCCGGYG 1 cut(s) 77
SgrDI CGTCGACG 1 cut(s) 150
SinI GGWCC 3 cut(s) 65, 218, 258
SlaI CTCGAG 1 cut(s) 500
SmiMI CAYNNNNRTG 4 cut(s) 521, 836, 1631, 1755
SmlI CTYRAG 3 cut(s) 500, 1174, 1428
SmoI CTYRAG 3 cut(s) 500, 1174, 1428
SpeI ACTAGT 1 cut(s) 770
SsiI CCGC 7 cut(s) 75, 333, 445, 1229, 1338, 1703, 1862
SspDI GGCGCC 1 cut(s) 1334
SspI AATATT 1 cut(s) 715
SspMI CTAG 5 cut(s) 39, 126, 341, 771, 1829
StyD4I CCNGG 4 cut(s) 174, 300, 671, 1654
StyI CCWWGG 1 cut(s) 563
TaaI ACNGT 7 cut(s) 12, 292, 355, 987, 1588, 1683, 1781
TaiI ACGT 4 cut(s) 97, 1261, 1270, 1569
TaqI TCGA 5 cut(s) 151, 501, 1135, 1372, 1708
TatI WGTACW 3 cut(s) 239, 1209, 1834
TauI GCSGC 2 cut(s) 77, 1340
TfiI GAWTC 5 cut(s) 284, 329, 952, 1110, 1477
Tru1I TTAA 2 cut(s) 306, 1583
Tru9I TTAA 2 cut(s) 306, 1583
TscAI CASTG 6 cut(s) 555, 990, 1609, 1748, 1786, 1874
TseFI GTSAC 3 cut(s) 829, 1056, 1501
TseI GCWGC 3 cut(s) 25, 168, 171
Tsp45I GTSAC 3 cut(s) 829, 1056, 1501
TspDTI ATGAA 5 cut(s) 17, 426, 806, 1102, 1518
TspGWI ACGGA 2 cut(s) 169, 376
TspRI CASTG 6 cut(s) 555, 990, 1609, 1748, 1786, 1874
Tth111I GACNNNGTC 1 cut(s) 144
VneI GTGCAC 1 cut(s) 1485
VpaK11BI GGWCC 3 cut(s) 65, 218, 258
XapI RAATTY 5 cut(s) 413, 688, 700, 856, 1799
XceI RCATGY 1 cut(s) 1511
XcmI CCANNNNNNNNNTGG 1 cut(s) 1727
XhoI CTCGAG 1 cut(s) 500
XmiI GTMKAC 1 cut(s) 151
XmnI GAANNNNTTC 3 cut(s) 205, 1109, 1211
XspI CTAG 5 cut(s) 39, 126, 341, 771, 1829
ZraI GACGTC 1 cut(s) 1268
ZrmI AGTACT 1 cut(s) 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.