Endoglucanase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 746 |
| AccB1I | GGYRCC | 1 cut(s) | 2548 |
| AccI | GTMKAC | 4 cut(s) | 195, 772, 2082, 2092 |
| AccII | CGCG | 1 cut(s) | 2289 |
| AccIII | TCCGGA | 2 cut(s) | 488, 1000 |
| AciI | CCGC | 7 cut(s) | 1108, 1338, 1562, 1990, 2857, 2862, 2967 |
| AclI | AACGTT | 1 cut(s) | 1182 |
| AcoI | YGGCCR | 1 cut(s) | 2481 |
| AcsI | RAATTY | 6 cut(s) | 458, 711, 1313, 1349, 1832, 2159 |
| AcuI | CTGAAG | 2 cut(s) | 2853, 3024 |
| AfaI | GTAC | 9 cut(s) | 354, 1043, 1249, 1262, 1475, 2107, 2297, 2409, 2950 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 58, 581, 1373, 1787, 2738, 3014 |
| AflIII | ACRYGT | 2 cut(s) | 552, 1163 |
| AhlI | ACTAGT | 1 cut(s) | 70 |
| AjiI | CACGTC | 1 cut(s) | 313 |
| AjnI | CCWGG | 3 cut(s) | 1230, 1629, 1675 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 41, 73, 2055, 2087 |
| AleI | CACNNNNGTG | 2 cut(s) | 635, 1481 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 470, 502, 556, 588 |
| Alw21I | GWGCWC | 1 cut(s) | 2966 |
| Alw26I | GTCTC | 3 cut(s) | 539, 1357, 2409 |
| Aor13HI | TCCGGA | 2 cut(s) | 488, 1000 |
| AoxI | GGCC | 7 cut(s) | 254, 778, 1072, 2330, 2481, 2685, 2819 |
| ApaI | GGGCCC | 1 cut(s) | 2689 |
| ApeKI | GCWGC | 2 cut(s) | 2024, 2194 |
| ApoI | RAATTY | 6 cut(s) | 458, 711, 1313, 1349, 1832, 2159 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 721, 753 |
| AseI | ATTAAT | 2 cut(s) | 896, 1907 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1184, 1968, 2877 |
| AspA2I | CCTAGG | 2 cut(s) | 508, 2353 |
| AspLEI | GCGC | 4 cut(s) | 1172, 1488, 2291, 2798 |
| AsuHPI | GGTGA | 4 cut(s) | 307, 1405, 1996, 2912 |
| AvaII | GGWCC | 9 cut(s) | 491, 923, 1223, 1799, 2075, 2300, 2443, 2742, 2859 |
| AvrII | CCTAGG | 2 cut(s) | 508, 2353 |
| BaeGI | GKGCMC | 1 cut(s) | 2689 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 120, 153, 523, 556, 1395, 1428 |
| BalI | TGGCCA | 1 cut(s) | 2483 |
| BamHI | GGATCC | 3 cut(s) | 1024, 2728, 2884 |
| BanI | GGYRCC | 1 cut(s) | 2548 |
| BanII | GRGCYC | 2 cut(s) | 2689, 2966 |
| BbsI | GAAGAC | 3 cut(s) | 113, 1612, 3030 |
| Bbv12I | GWGCWC | 1 cut(s) | 2966 |
| BbvCI | CCTCAGC | 1 cut(s) | 902 |
| BbvI | GCAGC | 2 cut(s) | 2011, 2206 |
| BccI | CCATC | 5 cut(s) | 50, 293, 370, 1526, 2096 |
| BceAI | ACGGC | 1 cut(s) | 2849 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1018, 1052 |
| BciT130I | CCWGG | 3 cut(s) | 1232, 1631, 1677 |
| BciVI | GTATCC | 2 cut(s) | 1396, 2903 |
| BclI | TGATCA | 2 cut(s) | 2775, 2941 |
| BcoDI | GTCTC | 3 cut(s) | 539, 1357, 2409 |
| BcuI | ACTAGT | 1 cut(s) | 70 |
| BfaI | CTAG | 9 cut(s) | 71, 509, 765, 792, 1736, 1782, 2354, 2723, 3063 |
| BfmI | CTRYAG | 7 cut(s) | 79, 910, 1014, 1419, 1821, 2535, 2596 |
| BfuI | GTATCC | 2 cut(s) | 1396, 2903 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2338 |
| BglII | AGATCT | 5 cut(s) | 340, 967, 1330, 2463, 3043 |
| BisI | GCNGC | 2 cut(s) | 2025, 2195 |
| BlnI | CCTAGG | 2 cut(s) | 508, 2353 |
| BlpI | GCTNAGC | 1 cut(s) | 1525 |
| BlsI | GCNGC | 2 cut(s) | 2026, 2196 |
| BmcAI | AGTACT | 3 cut(s) | 1043, 1262, 2950 |
| Bme1390I | CCNGG | 3 cut(s) | 1232, 1631, 1677 |
| Bme18I | GGWCC | 9 cut(s) | 491, 923, 1223, 1799, 2075, 2300, 2443, 2742, 2859 |
| BmgBI | CACGTC | 1 cut(s) | 313 |
| BmrFI | CCNGG | 3 cut(s) | 1232, 1631, 1677 |
| BmrI | ACTGGG | 2 cut(s) | 190, 1381 |
| BmsI | GCATC | 5 cut(s) | 1451, 1784, 1926, 2206, 2992 |
| BmuI | ACTGGG | 2 cut(s) | 190, 1381 |
| BpiI | GAAGAC | 3 cut(s) | 113, 1612, 3030 |
| BpmI | CTGGAG | 2 cut(s) | 1253, 2738 |
| Bpu10I | CCTNAGC | 1 cut(s) | 902 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1525 |
| BpuEI | CTTGAG | 2 cut(s) | 556, 2029 |
| Bsa29I | ATCGAT | 1 cut(s) | 1445 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1329, 1571, 2310 |
| BsaI | GGTCTC | 1 cut(s) | 1357 |
| BsaWI | WCCGGW | 3 cut(s) | 488, 1000, 2551 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 15, 45, 556, 586, 898, 928, 1875, 1905 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 58, 581, 1373, 1787, 2738, 3014 |
| Bse3DI | GCAATG | 2 cut(s) | 951, 1265 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1329, 1571, 2310 |
| BseAI | TCCGGA | 2 cut(s) | 488, 1000 |
| BseBI | CCWGG | 3 cut(s) | 1232, 1631, 1677 |
| BseCI | ATCGAT | 1 cut(s) | 1445 |
| BseGI | GGATG | 5 cut(s) | 1775, 1917, 2107, 2197, 2228 |
| BseJI | GATNNNNATC | 3 cut(s) | 1329, 1571, 2310 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 58, 581, 1373, 1787, 2738, 3014 |
| BseMI | GCAATG | 2 cut(s) | 951, 1265 |
| BseMII | CTCAG | 9 cut(s) | 430, 484, 893, 985, 1166, 1481, 1504, 1964, 2481 |
| BseRI | GAGGAG | 4 cut(s) | 919, 1302, 1320, 2513 |
| BseSI | GKGCMC | 1 cut(s) | 2689 |
| BseXI | GCAGC | 2 cut(s) | 2011, 2206 |
| BseYI | CCCAGC | 1 cut(s) | 228 |
| BsgI | GTGCAG | 2 cut(s) | 1185, 2937 |
| Bsh1236I | CGCG | 1 cut(s) | 2289 |
| BshFI | GGCC | 7 cut(s) | 256, 780, 1074, 2332, 2483, 2687, 2821 |
| BshNI | GGYRCC | 1 cut(s) | 2548 |
| BshVI | ATCGAT | 1 cut(s) | 1445 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2966 |
| BsiSI | CCGG | 3 cut(s) | 489, 1001, 2552 |
| BslFI | GGGAC | 5 cut(s) | 197, 451, 936, 1785, 2061 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 58, 581, 1373, 1787, 2738, 3014 |
| BsmAI | GTCTC | 3 cut(s) | 539, 1357, 2409 |
| BsmFI | GGGAC | 5 cut(s) | 197, 451, 936, 1785, 2061 |
| BsmI | GAATGC | 1 cut(s) | 1840 |
| BsnI | GGCC | 7 cut(s) | 256, 780, 1074, 2332, 2483, 2687, 2821 |
| Bso31I | GGTCTC | 1 cut(s) | 1357 |
| Bsp120I | GGGCCC | 1 cut(s) | 2685 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2689, 2966 |
| Bsp13I | TCCGGA | 2 cut(s) | 488, 1000 |
| Bsp1407I | TGTACA | 3 cut(s) | 1247, 1473, 2407 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1525 |
| Bsp19I | CCATGG | 2 cut(s) | 2896, 3008 |
| BspACI | CCGC | 7 cut(s) | 1108, 1338, 1562, 1990, 2857, 2862, 2967 |
| BspANI | GGCC | 7 cut(s) | 256, 780, 1074, 2332, 2483, 2687, 2821 |
| BspCNI | CTCAG | 9 cut(s) | 429, 483, 894, 984, 1165, 1480, 1503, 1965, 2480 |
| BspDI | ATCGAT | 1 cut(s) | 1445 |
| BspEI | TCCGGA | 2 cut(s) | 488, 1000 |
| BspFNI | CGCG | 1 cut(s) | 2289 |
| BspHI | TCATGA | 2 cut(s) | 45, 2155 |
| BspMAI | CTGCAG | 1 cut(s) | 83 |
| BspQI | GCTCTTC | 2 cut(s) | 1201, 2925 |
| BspT107I | GGYRCC | 1 cut(s) | 2548 |
| BspTNI | GGTCTC | 1 cut(s) | 1357 |
| BsrDI | GCAATG | 2 cut(s) | 951, 1265 |
| BsrGI | TGTACA | 3 cut(s) | 1247, 1473, 2407 |
| BssNAI | GTATAC | 2 cut(s) | 2083, 2093 |
| BssT1I | CCWWGG | 6 cut(s) | 404, 508, 2353, 2520, 2896, 3008 |
| Bst1107I | GTATAC | 2 cut(s) | 2083, 2093 |
| Bst2UI | CCWGG | 3 cut(s) | 1232, 1631, 1677 |
| Bst4CI | ACNGT | 6 cut(s) | 568, 1227, 1546, 2300, 2793, 2948 |
| Bst6I | CTCTTC | 3 cut(s) | 1201, 2490, 2925 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1439 |
| BstAUI | TGTACA | 3 cut(s) | 1247, 1473, 2407 |
| BstC8I | GCNNGC | 2 cut(s) | 141, 2287 |
| BstDSI | CCRYGG | 3 cut(s) | 2865, 2896, 3008 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1785 |
| BstF5I | GGATG | 5 cut(s) | 1775, 1917, 2107, 2197, 2228 |
| BstFNI | CGCG | 1 cut(s) | 2289 |
| BstHHI | GCGC | 4 cut(s) | 1172, 1488, 2291, 2798 |
| BstMAI | GTCTC | 3 cut(s) | 539, 1357, 2409 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1439, 2286, 2338, 2854 |
| BstNI | CCWGG | 3 cut(s) | 1232, 1631, 1677 |
| BstNSI | RCATGY | 2 cut(s) | 556, 1167 |
| BstSCI | CCNGG | 3 cut(s) | 1230, 1629, 1675 |
| BstSFI | CTRYAG | 7 cut(s) | 79, 910, 1014, 1419, 1821, 2535, 2596 |
| BstSLI | GKGCMC | 1 cut(s) | 2689 |
| BstUI | CGCG | 1 cut(s) | 2289 |
| BstV1I | GCAGC | 2 cut(s) | 2011, 2206 |
| BstV2I | GAAGAC | 3 cut(s) | 113, 1612, 3030 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 767 |
| BstZ17I | GTATAC | 2 cut(s) | 2083, 2093 |
| Bsu15I | ATCGAT | 1 cut(s) | 1445 |
| BsuI | GTATCC | 2 cut(s) | 1396, 2903 |
| BsuRI | GGCC | 7 cut(s) | 256, 780, 1074, 2332, 2483, 2687, 2821 |
| BsuTUI | ATCGAT | 1 cut(s) | 1445 |
| BtgI | CCRYGG | 3 cut(s) | 2865, 2896, 3008 |
| BtgZI | GCGATG | 1 cut(s) | 77 |
| BtrI | CACGTC | 1 cut(s) | 313 |
| BtsCI | GGATG | 5 cut(s) | 1775, 1917, 2107, 2197, 2228 |
| BtsI | GCAGTG | 2 cut(s) | 76, 2403 |
| BtsIMutI | CAGTG | 9 cut(s) | 76, 424, 478, 651, 702, 1365, 1386, 1603, 2403 |
| Cac8I | GCNNGC | 2 cut(s) | 141, 2287 |
| CciI | TCATGA | 2 cut(s) | 45, 2155 |
| CfoI | GCGC | 4 cut(s) | 1172, 1488, 2291, 2798 |
| ClaI | ATCGAT | 1 cut(s) | 1445 |
| CpoI | CGGWCCG | 1 cut(s) | 2859 |
| Csp6I | GTAC | 9 cut(s) | 353, 1042, 1248, 1261, 1474, 2106, 2296, 2408, 2949 |
| CspI | CGGWCCG | 1 cut(s) | 2859 |
| CviQI | GTAC | 9 cut(s) | 353, 1042, 1248, 1261, 1474, 2106, 2296, 2408, 2949 |
| DraI | TTTAAA | 3 cut(s) | 2049, 2319, 2584 |
| EaeI | YGGCCR | 1 cut(s) | 2481 |
| Eam1104I | CTCTTC | 3 cut(s) | 1201, 2490, 2925 |
| EarI | CTCTTC | 3 cut(s) | 1201, 2490, 2925 |
| EciI | GGCGGA | 1 cut(s) | 2872 |
| Ecl136II | GAGCTC | 1 cut(s) | 2964 |
| Eco130I | CCWWGG | 6 cut(s) | 404, 508, 2353, 2520, 2896, 3008 |
| Eco147I | AGGCCT | 2 cut(s) | 256, 2821 |
| Eco24I | GRGCYC | 2 cut(s) | 2689, 2966 |
| Eco31I | GGTCTC | 1 cut(s) | 1357 |
| Eco47I | GGWCC | 9 cut(s) | 491, 923, 1223, 1799, 2075, 2300, 2443, 2742, 2859 |
| Eco53kI | GAGCTC | 1 cut(s) | 2964 |
| Eco57I | CTGAAG | 2 cut(s) | 2853, 3024 |
| EcoICRI | GAGCTC | 1 cut(s) | 2964 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1785 |
| EcoO109I | RGGNCCY | 3 cut(s) | 779, 923, 2686 |
| EcoRI | GAATTC | 2 cut(s) | 711, 1832 |
| EcoRII | CCWGG | 3 cut(s) | 1230, 1629, 1675 |
| EcoT14I | CCWWGG | 6 cut(s) | 404, 508, 2353, 2520, 2896, 3008 |
| EcoT22I | ATGCAT | 1 cut(s) | 1444 |
| EcoT38I | GRGCYC | 2 cut(s) | 2689, 2966 |
| ErhI | CCWWGG | 6 cut(s) | 404, 508, 2353, 2520, 2896, 3008 |
| FaqI | GGGAC | 5 cut(s) | 197, 451, 936, 1785, 2061 |
| FbaI | TGATCA | 2 cut(s) | 2775, 2941 |
| FblI | GTMKAC | 4 cut(s) | 195, 772, 2082, 2092 |
| Fnu4HI | GCNGC | 2 cut(s) | 2025, 2195 |
| FokI | GGATG | 5 cut(s) | 1762, 1904, 2114, 2184, 2235 |
| FriOI | GRGCYC | 2 cut(s) | 2689, 2966 |
| Fsp4HI | GCNGC | 2 cut(s) | 2025, 2195 |
| FspBI | CTAG | 9 cut(s) | 71, 509, 765, 792, 1736, 1782, 2354, 2723, 3063 |
| GlaI | GCGC | 4 cut(s) | 1171, 1487, 2290, 2797 |
| GluI | GCNGC | 2 cut(s) | 2025, 2195 |
| GsaI | CCCAGC | 1 cut(s) | 232 |
| GsuI | CTGGAG | 2 cut(s) | 1253, 2738 |
| HaeIII | GGCC | 7 cut(s) | 256, 780, 1074, 2332, 2483, 2687, 2821 |
| HapII | CCGG | 3 cut(s) | 489, 1001, 2552 |
| HhaI | GCGC | 4 cut(s) | 1172, 1488, 2291, 2798 |
| Hin6I | GCGC | 4 cut(s) | 1170, 1486, 2289, 2796 |
| HinP1I | GCGC | 4 cut(s) | 1170, 1486, 2289, 2796 |
| HincII | GTYRAC | 3 cut(s) | 595, 740, 2167 |
| HindII | GTYRAC | 3 cut(s) | 595, 740, 2167 |
| HindIII | AAGCTT | 1 cut(s) | 2486 |
| HinfI | GANTC | 7 cut(s) | 115, 736, 1148, 1308, 1741, 1791, 2390 |
| HpaI | GTTAAC | 2 cut(s) | 595, 2167 |
| HpaII | CCGG | 3 cut(s) | 489, 1001, 2552 |
| HphI | GGTGA | 4 cut(s) | 307, 1405, 1996, 2912 |
| HpyAV | CCTTC | 9 cut(s) | 301, 514, 839, 983, 1073, 1642, 2057, 2395, 2846 |
| HpyCH4III | ACNGT | 6 cut(s) | 568, 1227, 1546, 2300, 2793, 2948 |
| HpyCH4IV | ACGT | 3 cut(s) | 312, 1182, 3035 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1439, 2286, 2338, 2854 |
| HpySE526I | ACGT | 3 cut(s) | 312, 1182, 3035 |
| HspAI | GCGC | 4 cut(s) | 1170, 1486, 2289, 2796 |
| Kpn2I | TCCGGA | 2 cut(s) | 488, 1000 |
| Ksp22I | TGATCA | 2 cut(s) | 2775, 2941 |
| KspAI | GTTAAC | 2 cut(s) | 595, 2167 |
| LguI | GCTCTTC | 2 cut(s) | 1201, 2925 |
| LmnI | GCTCC | 8 cut(s) | 293, 906, 1289, 1343, 1883, 2719, 2961, 2969 |
| Lsp1109I | GCAGC | 2 cut(s) | 2011, 2206 |
| LweI | GCATC | 5 cut(s) | 1451, 1784, 1926, 2206, 2992 |
| MaeI | CTAG | 9 cut(s) | 71, 509, 765, 792, 1736, 1782, 2354, 2723, 3063 |
| MaeII | ACGT | 3 cut(s) | 312, 1182, 3035 |
| MaeIII | GTNAC | 8 cut(s) | 313, 375, 639, 692, 1411, 1702, 1720, 2436 |
| MfeI | CAATTG | 1 cut(s) | 1878 |
| MhlI | GDGCHC | 2 cut(s) | 2689, 2966 |
| MlsI | TGGCCA | 1 cut(s) | 2483 |
| MluNI | TGGCCA | 1 cut(s) | 2483 |
| MlyI | GAGTC | 4 cut(s) | 109, 745, 1142, 1317 |
| MmeI | TCCRAC | 6 cut(s) | 435, 713, 1582, 1849, 2598, 2828 |
| Mox20I | TGGCCA | 1 cut(s) | 2483 |
| Mph1103I | ATGCAT | 1 cut(s) | 1444 |
| MroI | TCCGGA | 2 cut(s) | 488, 1000 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1184, 1968, 2877 |
| MscI | TGGCCA | 1 cut(s) | 2483 |
| MslI | CAYNNNNRTG | 3 cut(s) | 635, 1481, 2901 |
| Msp20I | TGGCCA | 1 cut(s) | 2483 |
| MspI | CCGG | 3 cut(s) | 489, 1001, 2552 |
| MspR9I | CCNGG | 3 cut(s) | 1232, 1631, 1677 |
| MunI | CAATTG | 1 cut(s) | 1878 |
| Mva1269I | GAATGC | 1 cut(s) | 1840 |
| MvaI | CCWGG | 3 cut(s) | 1232, 1631, 1677 |
| MvnI | CGCG | 1 cut(s) | 2289 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1439, 2286, 2338, 2854 |
| NcoI | CCATGG | 2 cut(s) | 2896, 3008 |
| NmuCI | GTSAC | 2 cut(s) | 313, 1411 |
| NsiI | ATGCAT | 1 cut(s) | 1444 |
| NspI | RCATGY | 2 cut(s) | 556, 1167 |
| OliI | CACNNNNGTG | 2 cut(s) | 635, 1481 |
| PagI | TCATGA | 2 cut(s) | 45, 2155 |
| PceI | AGGCCT | 2 cut(s) | 256, 2821 |
| PciI | ACATGT | 2 cut(s) | 552, 1163 |
| PciSI | GCTCTTC | 2 cut(s) | 1201, 2925 |
| PctI | GAATGC | 1 cut(s) | 1840 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1184, 1968, 2877 |
| PfeI | GAWTC | 3 cut(s) | 1741, 1791, 2390 |
| PfoI | TCCNGGA | 1 cut(s) | 1629 |
| PkrI | GCNGC | 2 cut(s) | 2026, 2196 |
| PleI | GAGTC | 4 cut(s) | 109, 744, 1142, 1316 |
| PpsI | GAGTC | 4 cut(s) | 109, 744, 1142, 1316 |
| PpuMI | RGGWCCY | 1 cut(s) | 923 |
| PscI | ACATGT | 2 cut(s) | 552, 1163 |
| PshBI | ATTAAT | 2 cut(s) | 896, 1907 |
| PsiI | TTATAA | 1 cut(s) | 746 |
| Psp124BI | GAGCTC | 1 cut(s) | 2966 |
| Psp1406I | AACGTT | 1 cut(s) | 1182 |
| Psp5II | RGGWCCY | 1 cut(s) | 923 |
| Psp6I | CCWGG | 3 cut(s) | 1230, 1629, 1675 |
| PspFI | CCCAGC | 1 cut(s) | 228 |
| PspGI | CCWGG | 3 cut(s) | 1230, 1629, 1675 |
| PspOMI | GGGCCC | 1 cut(s) | 2685 |
| PspPPI | RGGWCCY | 1 cut(s) | 923 |
| PstI | CTGCAG | 1 cut(s) | 83 |
| RsaI | GTAC | 9 cut(s) | 354, 1043, 1249, 1262, 1475, 2107, 2297, 2409, 2950 |
| RsaNI | GTAC | 9 cut(s) | 353, 1042, 1248, 1261, 1474, 2106, 2296, 2408, 2949 |
| RseI | CAYNNNNRTG | 3 cut(s) | 635, 1481, 2901 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2859 |
| RsrII | CGGWCCG | 1 cut(s) | 2859 |
| SacI | GAGCTC | 1 cut(s) | 2966 |
| SapI | GCTCTTC | 2 cut(s) | 1201, 2925 |
| SatI | GCNGC | 2 cut(s) | 2025, 2195 |
| ScaI | AGTACT | 3 cut(s) | 1043, 1262, 2950 |
| SchI | GAGTC | 4 cut(s) | 109, 745, 1142, 1317 |
| ScrFI | CCNGG | 3 cut(s) | 1232, 1631, 1677 |
| SduI | GDGCHC | 2 cut(s) | 2689, 2966 |
| SfaNI | GCATC | 5 cut(s) | 1451, 1784, 1926, 2206, 2992 |
| SfcI | CTRYAG | 7 cut(s) | 79, 910, 1014, 1419, 1821, 2535, 2596 |
| SinI | GGWCC | 9 cut(s) | 491, 923, 1223, 1799, 2075, 2300, 2443, 2742, 2859 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 635, 1481, 2901 |
| SmlI | CTYRAG | 2 cut(s) | 535, 2008 |
| SmoI | CTYRAG | 2 cut(s) | 535, 2008 |
| SpeI | ACTAGT | 1 cut(s) | 70 |
| SseBI | AGGCCT | 2 cut(s) | 256, 2821 |
| SsiI | CCGC | 7 cut(s) | 1108, 1338, 1562, 1990, 2857, 2862, 2967 |
| SspMI | CTAG | 9 cut(s) | 71, 509, 765, 792, 1736, 1782, 2354, 2723, 3063 |
| SstI | GAGCTC | 1 cut(s) | 2966 |
| StuI | AGGCCT | 2 cut(s) | 256, 2821 |
| StyD4I | CCNGG | 3 cut(s) | 1230, 1629, 1675 |
| StyI | CCWWGG | 6 cut(s) | 404, 508, 2353, 2520, 2896, 3008 |
| TaaI | ACNGT | 6 cut(s) | 568, 1227, 1546, 2300, 2793, 2948 |
| TaiI | ACGT | 3 cut(s) | 315, 1185, 3038 |
| TaqI | TCGA | 3 cut(s) | 113, 1445, 2141 |
| TatI | WGTACW | 7 cut(s) | 352, 1041, 1247, 1260, 1473, 2407, 2948 |
| TfiI | GAWTC | 3 cut(s) | 1741, 1791, 2390 |
| TscAI | CASTG | 9 cut(s) | 83, 424, 478, 651, 709, 1365, 1393, 1603, 2403 |
| TseFI | GTSAC | 2 cut(s) | 313, 1411 |
| TseI | GCWGC | 2 cut(s) | 2024, 2194 |
| Tsp45I | GTSAC | 2 cut(s) | 313, 1411 |
| TspGWI | ACGGA | 3 cut(s) | 146, 777, 1624 |
| TspRI | CASTG | 9 cut(s) | 83, 424, 478, 651, 709, 1365, 1393, 1603, 2403 |
| VpaK11BI | GGWCC | 9 cut(s) | 491, 923, 1223, 1799, 2075, 2300, 2443, 2742, 2859 |
| VspI | ATTAAT | 2 cut(s) | 896, 1907 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1785 |
| XapI | RAATTY | 6 cut(s) | 458, 711, 1313, 1349, 1832, 2159 |
| XbaI | TCTAGA | 1 cut(s) | 1735 |
| XceI | RCATGY | 2 cut(s) | 556, 1167 |
| XmaJI | CCTAGG | 2 cut(s) | 508, 2353 |
| XmiI | GTMKAC | 4 cut(s) | 195, 772, 2082, 2092 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1184, 1968, 2877 |
| XspI | CTAG | 9 cut(s) | 71, 509, 765, 792, 1736, 1782, 2354, 2723, 3063 |
| ZrmI | AGTACT | 3 cut(s) | 1043, 1262, 2950 |
| Zsp2I | ATGCAT | 1 cut(s) | 1444 |