Rh6BG352300
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000115
Physical Location & Seq
Forward (+)
58334030 .. 58353815
19786 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG352300.1

Sequence Viewer

Length: 1176 bp
ATGGCAGCCAACTCCATTTTCAGATTGGCATCCCCAATATTGTCTCGTTTGTTTTGCAGAAATTGTCTCTCTCTCCATGCAGTTGCTGATTCTCGTTTTCGTCTTCAAAGTCAGTGCTTTTGTACAAAAAGACTGACCAGCAGCTCCGATGATTTTACAGTCTCCTACCTGGTTAACTCATGTGGGCTTTCCCCAGAAGCCGTCATTGTAGCATCCCACAAGGTAAAGCTTCCATCTTTCGAGAAACCAAACTCCGTTTTAGCGCTTCTGAAACACTATGAATTCTCAGAAATCCAGATCTCAACTCTTGTGCGGAGACACCCACATGTTCTGGTGGCAAATGCCCAGGAAACCCTTTTGCCAAAGCTCGAGTTTTTGTGCTCCATAGGAATGTCAAGGCTCGACCTTGCAAGAACACTGGCAAACAACCCAATTGTTTTGATGCGAAGTTTGGAATACCAAATTAGACCCTCTTATACCTTCTTCAAAAAAGTGGTGCTCTCTGATGTGAAGGTCGTCGATATTTGGAAGCGCAACTCATGGATTTTCAGGGGAAATCTGTTCAAGAATGTGATGCCCAATATTGAGCTTCCTGAATTCTTCAGTCAACTTGTGGGTGAGGTCAAAGAAATGGGATTTGACCCTCAAAGGTCGAGCTTTGTGCAGGCCATGCATGCATTATCTGGAAAAGAGACGACATGGAAACTCTGTCAAGAGGCTTATAGGAGGTGGGGTTGGTCTGACGAGGATATTCTTGATGCCTTCAGGTTGCATCCGCTGTGTATGATGAAGTCAGGGAAGAAAATAATGGAAACAATGGATTTCTTAGTGAACAAGATGGGGTGGCAGTCACAGAAGATTGCAAGGTCTTCCAGGGTTTTGGGTTACAGCTTGGAGAAGAGAATCATCCCAAGGTGTTCCGTTGTTAGAATTTTGTTGTTGAAAGGATTGATGAAAGAGGAAGAGTTGAATATGAATACTATTACTACTCCTTCAGAGAAATACTTCTTGACTAAGTTTGTGAGCAGATATCTCAACCAAGTACCTCAATTGTTGAATGTGTACCAAGGGAAAGTGGATTTTCAGGATCAAATTGAACGTGTTCTGCGTCTATCATTGTTGTTCATGATAGTTGATGAAAAGACGGTGTTTGCTGTTGCTGCTGAGTCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

391

Amino Acids

45.06

Weight (kDa)

9.37

Isoelectric Point (pI)

50.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 87 - 196 8.9e-13 mTERF
mTERF PF02536 233 - 336 1.2e-12 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 313, 776
AclWI GGATC 1 cut(s) 1095
AcsI RAATTY 3 cut(s) 281, 596, 930
AcuI CTGAAG 3 cut(s) 586, 748, 978
AfaI GTAC 3 cut(s) 124, 1044, 1064
AfeI AGCGCT 1 cut(s) 264
AflIII ACRYGT 2 cut(s) 325, 1099
AgsI TTSAA 7 cut(s) 107, 487, 565, 943, 970, 1057, 1097
AjnI CCWGG 3 cut(s) 168, 345, 872
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 6 cut(s) 144, 229, 367, 589, 657, 891
AluI AGCT 6 cut(s) 144, 229, 367, 589, 657, 891
Alw21I GWGCWC 2 cut(s) 383, 501
Alw26I GTCTC 5 cut(s) 48, 71, 166, 310, 686
AlwI GGATC 1 cut(s) 1095
AlwNI CAGNNNCTG 1 cut(s) 86
Ama87I CYCGRG 1 cut(s) 368
Aor51HI AGCGCT 1 cut(s) 264
AoxI GGCC 1 cut(s) 666
ApeKI GCWGC 3 cut(s) 5, 141, 1160
ApoI RAATTY 3 cut(s) 281, 596, 930
Asp700I GAANNNNTTC 2 cut(s) 1004, 1101
AspLEI GCGC 2 cut(s) 265, 534
AsuHPI GGTGA 1 cut(s) 629
AvaI CYCGRG 1 cut(s) 368
BbsI GAAGAC 2 cut(s) 95, 861
Bbv12I GWGCWC 2 cut(s) 383, 501
BbvI GCAGC 3 cut(s) 17, 153, 1147
BccI CCATC 2 cut(s) 241, 832
BceAI ACGGC 1 cut(s) 185
BcgI CGANNNNNNTGC 2 cut(s) 643, 677
BciT130I CCWGG 3 cut(s) 170, 347, 874
BcoDI GTCTC 5 cut(s) 48, 71, 166, 310, 686
BfoI RGCGCY 1 cut(s) 266
BglII AGATCT 1 cut(s) 297
BisI GCNGC 3 cut(s) 6, 142, 1161
BlsI GCNGC 3 cut(s) 7, 143, 1162
Bme1390I CCNGG 3 cut(s) 170, 347, 874
BmeT110I CYCGRG 1 cut(s) 368
BmrFI CCNGG 3 cut(s) 170, 347, 874
BmsI GCATC 6 cut(s) 38, 221, 432, 564, 748, 781
BpiI GAAGAC 2 cut(s) 95, 861
BsaBI GATNNNNATC 1 cut(s) 28
BsaJI CCNNGG 4 cut(s) 345, 873, 911, 1066
BsaXI ACNNNNNCTCC 2 cut(s) 718, 748
Bse1I ACTGG 1 cut(s) 423
Bse8I GATNNNNATC 1 cut(s) 28
BseBI CCWGG 3 cut(s) 170, 347, 874
BseDI CCNNGG 4 cut(s) 345, 873, 911, 1066
BseGI GGATG 4 cut(s) 29, 212, 772, 906
BseJI GATNNNNATC 1 cut(s) 28
BseMII CTCAG 3 cut(s) 300, 1155, 1161
BseNI ACTGG 1 cut(s) 423
BseXI GCAGC 3 cut(s) 17, 153, 1147
BsgI GTGCAG 1 cut(s) 683
BshFI GGCC 1 cut(s) 668
BsiHKAI GWGCWC 2 cut(s) 383, 501
BsiHKCI CYCGRG 1 cut(s) 368
BsmAI GTCTC 5 cut(s) 48, 71, 166, 310, 686
BsmBI CGTCTC 1 cut(s) 686
BsnI GGCC 1 cut(s) 668
BsoBI CYCGRG 1 cut(s) 368
Bsp1286I GDGCHC 2 cut(s) 383, 501
Bsp1407I TGTACA 1 cut(s) 122
Bsp143I GATC 2 cut(s) 297, 1087
BspACI CCGC 2 cut(s) 313, 776
BspANI GGCC 1 cut(s) 668
BspCNI CTCAG 3 cut(s) 299, 1156, 1162
BspHI TCATGA 1 cut(s) 1125
BspPI GGATC 1 cut(s) 1095
BsrGI TGTACA 1 cut(s) 122
BsrI ACTGG 1 cut(s) 423
BssECI CCNNGG 4 cut(s) 345, 873, 911, 1066
BssMI GATC 2 cut(s) 297, 1087
BssT1I CCWWGG 2 cut(s) 911, 1066
Bst2UI CCWGG 3 cut(s) 170, 347, 874
Bst4CI ACNGT 2 cut(s) 160, 1147
Bst6I CTCTTC 2 cut(s) 893, 957
BstAPI GCANNNNNTGC 1 cut(s) 670
BstAUI TGTACA 1 cut(s) 122
BstC8I GCNNGC 2 cut(s) 666, 675
BstDEI CTNAG 5 cut(s) 286, 826, 1014, 1164, 1170
BstF5I GGATG 4 cut(s) 29, 212, 772, 906
BstH2I RGCGCY 1 cut(s) 266
BstHHI GCGC 2 cut(s) 265, 534
BstKTI GATC 2 cut(s) 300, 1090
BstMAI GTCTC 5 cut(s) 48, 71, 166, 310, 686
BstMBI GATC 2 cut(s) 297, 1087
BstMWI GCNNNNNNNGC 3 cut(s) 670, 674, 1160
BstNI CCWGG 3 cut(s) 170, 347, 874
BstNSI RCATGY 2 cut(s) 329, 677
BstSCI CCNGG 3 cut(s) 168, 345, 872
BstV1I GCAGC 3 cut(s) 17, 153, 1147
BstV2I GAAGAC 2 cut(s) 95, 861
BstX2I RGATCY 1 cut(s) 297
BstXI CCANNNNNNTGG 1 cut(s) 880
BstYI RGATCY 1 cut(s) 297
BsuRI GGCC 1 cut(s) 668
BtsCI GGATG 4 cut(s) 29, 212, 772, 906
BtsIMutI CAGTG 2 cut(s) 119, 416
Cac8I GCNNGC 2 cut(s) 666, 675
CaiI CAGNNNCTG 1 cut(s) 86
CciI TCATGA 1 cut(s) 1125
CfoI GCGC 2 cut(s) 265, 534
CseI GACGC 1 cut(s) 1097
CsiI ACCWGGT 1 cut(s) 168
Csp6I GTAC 3 cut(s) 123, 1043, 1063
CviAII CATG 8 cut(s) 77, 180, 326, 540, 670, 674, 699, 1126
CviQI GTAC 3 cut(s) 123, 1043, 1063
DdeI CTNAG 5 cut(s) 286, 826, 1014, 1164, 1170
DpnI GATC 2 cut(s) 299, 1089
DpnII GATC 2 cut(s) 297, 1087
Eam1104I CTCTTC 2 cut(s) 893, 957
EarI CTCTTC 2 cut(s) 893, 957
Eco130I CCWWGG 2 cut(s) 911, 1066
Eco32I GATATC 1 cut(s) 1031
Eco47III AGCGCT 1 cut(s) 264
Eco57I CTGAAG 3 cut(s) 586, 748, 978
Eco88I CYCGRG 1 cut(s) 368
EcoRI GAATTC 2 cut(s) 281, 596
EcoRII CCWGG 3 cut(s) 168, 345, 872
EcoRV GATATC 1 cut(s) 1031
EcoT14I CCWWGG 2 cut(s) 911, 1066
EcoT22I ATGCAT 2 cut(s) 675, 679
ErhI CCWWGG 2 cut(s) 911, 1066
Esp3I CGTCTC 1 cut(s) 686
FaeI CATG 8 cut(s) 80, 183, 329, 543, 673, 677, 702, 1129
FatI CATG 8 cut(s) 76, 179, 325, 539, 669, 673, 698, 1125
Fnu4HI GCNGC 3 cut(s) 6, 142, 1161
FokI GGATG 4 cut(s) 16, 199, 759, 893
Fsp4HI GCNGC 3 cut(s) 6, 142, 1161
GlaI GCGC 2 cut(s) 264, 533
GluI GCNGC 3 cut(s) 6, 142, 1161
HaeII RGCGCY 1 cut(s) 266
HaeIII GGCC 1 cut(s) 668
HgaI GACGC 1 cut(s) 1097
HhaI GCGC 2 cut(s) 265, 534
Hin1II CATG 8 cut(s) 80, 183, 329, 543, 673, 677, 702, 1129
Hin6I GCGC 2 cut(s) 263, 532
HinP1I GCGC 2 cut(s) 263, 532
HincII GTYRAC 2 cut(s) 175, 608
HindII GTYRAC 2 cut(s) 175, 608
HindIII AAGCTT 1 cut(s) 227
HinfI GANTC 3 cut(s) 89, 903, 1166
HpaI GTTAAC 1 cut(s) 175
HphI GGTGA 1 cut(s) 629
Hpy166II GTNNAC 4 cut(s) 175, 608, 832, 1063
Hpy188I TCNGA 8 cut(s) 23, 148, 270, 289, 505, 742, 997, 1171
Hpy8I GTNNAC 4 cut(s) 175, 608, 832, 1063
Hpy99I CGWCG 1 cut(s) 521
HpyAV CCTTC 4 cut(s) 490, 505, 772, 1002
HpyCH4III ACNGT 2 cut(s) 160, 1147
HpyCH4IV ACGT 1 cut(s) 1099
HpyCH4V TGCA 8 cut(s) 57, 80, 410, 664, 673, 677, 772, 863
HpyF10VI GCNNNNNNNGC 3 cut(s) 670, 674, 1160
HpyF3I CTNAG 5 cut(s) 286, 826, 1014, 1164, 1170
HpySE526I ACGT 1 cut(s) 1099
Hsp92II CATG 8 cut(s) 80, 183, 329, 543, 673, 677, 702, 1129
HspAI GCGC 2 cut(s) 263, 532
KspAI GTTAAC 1 cut(s) 175
Kzo9I GATC 2 cut(s) 297, 1087
LmnI GCTCC 2 cut(s) 149, 386
Lsp1109I GCAGC 3 cut(s) 17, 153, 1147
LweI GCATC 6 cut(s) 38, 221, 432, 564, 748, 781
MabI ACCWGGT 1 cut(s) 168
MaeII ACGT 1 cut(s) 1099
MaeIII GTNAC 2 cut(s) 849, 884
MalI GATC 2 cut(s) 299, 1089
MboI GATC 2 cut(s) 297, 1087
MboII GAAGA 8 cut(s) 95, 475, 592, 811, 861, 868, 910, 974
MfeI CAATTG 2 cut(s) 432, 1049
MflI RGATCY 1 cut(s) 297
MhlI GDGCHC 2 cut(s) 383, 501
MluCI AATT 8 cut(s) 61, 281, 432, 462, 596, 930, 1049, 1092
MlyI GAGTC 1 cut(s) 1175
MnlI CCTC 8 cut(s) 481, 613, 654, 709, 720, 739, 952, 1056
Mph1103I ATGCAT 2 cut(s) 675, 679
MroXI GAANNNNTTC 2 cut(s) 1004, 1101
MseI TTAA 1 cut(s) 174
MslI CAYNNNNRTG 2 cut(s) 324, 389
MspA1I CMGCKG 1 cut(s) 778
MspR9I CCNGG 3 cut(s) 170, 347, 874
MunI CAATTG 2 cut(s) 432, 1049
MvaI CCWGG 3 cut(s) 170, 347, 874
MwoI GCNNNNNNNGC 3 cut(s) 670, 674, 1160
NdeII GATC 2 cut(s) 297, 1087
NlaIII CATG 8 cut(s) 80, 183, 329, 543, 673, 677, 702, 1129
NmuCI GTSAC 1 cut(s) 849
NsiI ATGCAT 2 cut(s) 675, 679
NspI RCATGY 2 cut(s) 329, 677
PaeI GCATGC 1 cut(s) 677
PaeR7I CTCGAG 1 cut(s) 368
PagI TCATGA 1 cut(s) 1125
PciI ACATGT 1 cut(s) 325
PcsI WCGNNNNNNNCGW 1 cut(s) 1105
PdmI GAANNNNTTC 2 cut(s) 1004, 1101
PfeI GAWTC 2 cut(s) 89, 903
PkrI GCNGC 3 cut(s) 7, 143, 1162
PleI GAGTC 1 cut(s) 1174
PpsI GAGTC 1 cut(s) 1174
PscI ACATGT 1 cut(s) 325
Psp6I CCWGG 3 cut(s) 168, 345, 872
PspGI CCWGG 3 cut(s) 168, 345, 872
PspXI VCTCGAGB 1 cut(s) 368
PstNI CAGNNNCTG 1 cut(s) 86
PsuI RGATCY 1 cut(s) 297
RsaI GTAC 3 cut(s) 124, 1044, 1064
RsaNI GTAC 3 cut(s) 123, 1043, 1063
RseI CAYNNNNRTG 2 cut(s) 324, 389
SaqAI TTAA 1 cut(s) 174
SatI GCNGC 3 cut(s) 6, 142, 1161
Sau3AI GATC 2 cut(s) 297, 1087
SchI GAGTC 1 cut(s) 1175
ScrFI CCNGG 3 cut(s) 170, 347, 874
SduI GDGCHC 2 cut(s) 383, 501
SexAI ACCWGGT 1 cut(s) 168
SfaNI GCATC 6 cut(s) 38, 221, 432, 564, 748, 781
Sfr274I CTCGAG 1 cut(s) 368
SlaI CTCGAG 1 cut(s) 368
SmiMI CAYNNNNRTG 2 cut(s) 324, 389
SmlI CTYRAG 1 cut(s) 368
SmoI CTYRAG 1 cut(s) 368
SphI GCATGC 1 cut(s) 677
Sse9I AATT 8 cut(s) 61, 281, 432, 462, 596, 930, 1049, 1092
SsiI CCGC 2 cut(s) 313, 776
SspI AATATT 2 cut(s) 39, 583
StyD4I CCNGG 3 cut(s) 168, 345, 872
StyI CCWWGG 2 cut(s) 911, 1066
TaaI ACNGT 2 cut(s) 160, 1147
TaiI ACGT 1 cut(s) 1102
TaqI TCGA 5 cut(s) 240, 369, 402, 519, 653
TasI AATT 8 cut(s) 61, 281, 432, 462, 596, 930, 1049, 1092
TatI WGTACW 1 cut(s) 122
TfiI GAWTC 2 cut(s) 89, 903
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TscAI CASTG 2 cut(s) 119, 423
TseFI GTSAC 1 cut(s) 849
TseI GCWGC 3 cut(s) 5, 141, 1160
Tsp45I GTSAC 1 cut(s) 849
TspDTI ATGAA 6 cut(s) 294, 803, 968, 989, 1114, 1152
TspGWI ACGGA 2 cut(s) 244, 910
TspRI CASTG 2 cut(s) 119, 423
XapI RAATTY 3 cut(s) 281, 596, 930
XceI RCATGY 2 cut(s) 329, 677
XcmI CCANNNNNNNNNTGG 1 cut(s) 22
XhoI CTCGAG 1 cut(s) 368
XmnI GAANNNNTTC 2 cut(s) 1004, 1101
Zsp2I ATGCAT 2 cut(s) 675, 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.