pycom02g23980
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
22063397 .. 22063960
564 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g23980.1

Sequence Viewer

Length: 564 bp
ATGCAATTCCGGCGTCCAAGAGGGTCGAGTTGCGCTCCCCAGATAGAGCTGACTCCGTTTTGGCCATTCTCGGAAACCATGGACTCTCACAAACCCAGATATCGAAGATCGATCAGGAATCACTCAGAAGTTCTTCAGTTCGATCCGGATAAAACCCTTTTGCCAAAGCTTGAATTTTTCAGATCTCTTGGGGTTTCAAGGGAGGAACTTGCATCAGTTCTGGCATATCGTCCGCAGCTTTTGACCAGAAACTTGGAGAACCGGATTGTTCCCTCTTATGATTTCCTTAGGAGTCTGCTTTCTCAGAAAAATGTTGTTTCTATTTTGAAGCAGGGGTCGTGGATTTTCGTGGAAGGCCATTCCAAGAAGCTGGCGCCAAATATTGAGGTTTTGAGAGAATCAGGTATGCCCCAATCACGCATTTATATGTTGCTTGTTCATCACCCCTTCGTTTTTTTGCGAAAGCCTAAAGAGCTTGGTCAACTCGTGGATGAGGTTAAGCAAATGGGTTTTAATCTGAACAAAACCAAATTCTCTGTTGGCATTAAGAGCATTGTGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

188

Amino Acids

21.78

Weight (kDa)

10.14

Isoelectric Point (pI)

65.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 36 - 172 6.1e-17 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 373
AccIII TCCGGA 1 cut(s) 145
AciI CCGC 1 cut(s) 233
AclWI GGATC 1 cut(s) 137
AcoI YGGCCR 1 cut(s) 62
AcsI RAATTY 2 cut(s) 173, 530
AcuI CTGAAG 1 cut(s) 119
AcyI GRCGYC 2 cut(s) 13, 374
AgsI TTSAA 3 cut(s) 173, 198, 328
AluBI AGCT 5 cut(s) 49, 169, 238, 370, 475
AluI AGCT 5 cut(s) 49, 169, 238, 370, 475
AlwI GGATC 1 cut(s) 137
Aor13HI TCCGGA 1 cut(s) 145
AoxI GGCC 2 cut(s) 62, 355
ApeKI GCWGC 1 cut(s) 235
ApoI RAATTY 2 cut(s) 173, 530
Asp700I GAANNNNTTC 1 cut(s) 132
AspLEI GCGC 2 cut(s) 35, 376
AsuHPI GGTGA 1 cut(s) 434
AxyI CCTNAGG 1 cut(s) 287
BalI TGGCCA 1 cut(s) 64
BanI GGYRCC 1 cut(s) 373
BauI CACGAG 1 cut(s) 485
BbvI GCAGC 1 cut(s) 247
BfoI RGCGCY 1 cut(s) 377
BglII AGATCT 1 cut(s) 182
BisI GCNGC 1 cut(s) 236
BlsI GCNGC 1 cut(s) 237
BmiI GGNNCC 1 cut(s) 375
BmsI GCATC 1 cut(s) 221
BplI GAGNNNNNCTC 2 cut(s) 19, 51
Bsa29I ATCGAT 1 cut(s) 110
BsaHI GRCGYC 2 cut(s) 13, 374
BsaJI CCNNGG 1 cut(s) 78
BsaWI WCCGGW 2 cut(s) 145, 261
Bse21I CCTNAGG 1 cut(s) 287
BseAI TCCGGA 1 cut(s) 145
BseCI ATCGAT 1 cut(s) 110
BseDI CCNNGG 1 cut(s) 78
BseGI GGATG 1 cut(s) 496
BseMII CTCAG 2 cut(s) 138, 317
BseXI GCAGC 1 cut(s) 247
BshFI GGCC 2 cut(s) 64, 357
BshNI GGYRCC 1 cut(s) 373
BshVI ATCGAT 1 cut(s) 110
BsiSI CCGG 3 cut(s) 10, 146, 262
BsnI GGCC 2 cut(s) 64, 357
Bsp13I TCCGGA 1 cut(s) 145
Bsp143I GATC 4 cut(s) 107, 111, 142, 182
Bsp19I CCATGG 1 cut(s) 78
BspACI CCGC 1 cut(s) 233
BspANI GGCC 2 cut(s) 64, 357
BspCNI CTCAG 2 cut(s) 137, 316
BspDI ATCGAT 1 cut(s) 110
BspEI TCCGGA 1 cut(s) 145
BspLI GGNNCC 1 cut(s) 375
BspPI GGATC 1 cut(s) 137
BspT107I GGYRCC 1 cut(s) 373
BssECI CCNNGG 1 cut(s) 78
BssMI GATC 4 cut(s) 107, 111, 142, 182
BssNI GRCGYC 2 cut(s) 13, 374
BssSI CACGAG 1 cut(s) 485
BssT1I CCWWGG 1 cut(s) 78
Bst2BI CACGAG 1 cut(s) 485
BstACI GRCGYC 2 cut(s) 13, 374
BstC8I GCNNGC 1 cut(s) 372
BstDEI CTNAG 3 cut(s) 124, 287, 303
BstDSI CCRYGG 1 cut(s) 78
BstF5I GGATG 1 cut(s) 496
BstH2I RGCGCY 1 cut(s) 377
BstHHI GCGC 2 cut(s) 35, 376
BstKTI GATC 4 cut(s) 110, 114, 145, 185
BstMBI GATC 4 cut(s) 107, 111, 142, 182
BstMWI GCNNNNNNNGC 3 cut(s) 10, 472, 549
BstV1I GCAGC 1 cut(s) 247
BstX2I RGATCY 1 cut(s) 182
BstXI CCANNNNNNTGG 2 cut(s) 253, 370
BstYI RGATCY 1 cut(s) 182
Bsu15I ATCGAT 1 cut(s) 110
Bsu36I CCTNAGG 1 cut(s) 287
BsuRI GGCC 2 cut(s) 64, 357
BsuTUI ATCGAT 1 cut(s) 110
BtgI CCRYGG 1 cut(s) 78
BtsCI GGATG 1 cut(s) 496
Cac8I GCNNGC 1 cut(s) 372
CfoI GCGC 2 cut(s) 35, 376
ClaI ATCGAT 1 cut(s) 110
CseI GACGC 1 cut(s) 2
CviAII CATG 1 cut(s) 79
CviJI RGCY 8 cut(s) 49, 64, 169, 238, 357, 370, 466, 475
CviKI_1 RGCY 8 cut(s) 49, 64, 169, 238, 357, 370, 466, 475
DdeI CTNAG 3 cut(s) 124, 287, 303
DinI GGCGCC 1 cut(s) 375
DpnI GATC 4 cut(s) 109, 113, 144, 184
DpnII GATC 4 cut(s) 107, 111, 142, 182
EaeI YGGCCR 1 cut(s) 62
Eco130I CCWWGG 1 cut(s) 78
Eco32I GATATC 1 cut(s) 101
Eco57I CTGAAG 1 cut(s) 119
Eco81I CCTNAGG 1 cut(s) 287
EcoRV GATATC 1 cut(s) 101
EcoT14I CCWWGG 1 cut(s) 78
EgeI GGCGCC 1 cut(s) 375
EheI GGCGCC 1 cut(s) 375
ErhI CCWWGG 1 cut(s) 78
FaeI CATG 1 cut(s) 82
FaiI YATR 6 cut(s) 80, 226, 279, 407, 426, 428
FatI CATG 1 cut(s) 78
Fnu4HI GCNGC 1 cut(s) 236
FokI GGATG 1 cut(s) 503
Fsp4HI GCNGC 1 cut(s) 236
GlaI GCGC 2 cut(s) 34, 375
GluI GCNGC 1 cut(s) 236
HaeII RGCGCY 1 cut(s) 377
HaeIII GGCC 2 cut(s) 64, 357
HapII CCGG 3 cut(s) 10, 146, 262
HgaI GACGC 1 cut(s) 2
HhaI GCGC 2 cut(s) 35, 376
Hin1I GRCGYC 2 cut(s) 13, 374
Hin1II CATG 1 cut(s) 82
Hin6I GCGC 2 cut(s) 33, 374
HinP1I GCGC 2 cut(s) 33, 374
HincII GTYRAC 1 cut(s) 482
HindII GTYRAC 1 cut(s) 482
HindIII AAGCTT 1 cut(s) 167
HinfI GANTC 5 cut(s) 52, 83, 118, 292, 398
HpaII CCGG 3 cut(s) 10, 146, 262
HphI GGTGA 1 cut(s) 434
Hpy166II GTNNAC 1 cut(s) 482
Hpy188I TCNGA 5 cut(s) 73, 127, 182, 306, 519
Hpy188III TCNNGA 2 cut(s) 115, 146
Hpy8I GTNNAC 1 cut(s) 482
HpyAV CCTTC 2 cut(s) 347, 457
HpyCH4V TGCA 2 cut(s) 4, 212
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 472, 549
HpyF3I CTNAG 3 cut(s) 124, 287, 303
Hsp92I GRCGYC 2 cut(s) 13, 374
Hsp92II CATG 1 cut(s) 82
HspAI GCGC 2 cut(s) 33, 374
KasI GGCGCC 1 cut(s) 373
Kpn2I TCCGGA 1 cut(s) 145
Kzo9I GATC 4 cut(s) 107, 111, 142, 182
LmnI GCTCC 1 cut(s) 40
Lsp1109I GCAGC 1 cut(s) 247
LweI GCATC 1 cut(s) 221
MalI GATC 4 cut(s) 109, 113, 144, 184
MboI GATC 4 cut(s) 107, 111, 142, 182
MboII GAAGA 2 cut(s) 117, 125
MflI RGATCY 1 cut(s) 182
MlsI TGGCCA 1 cut(s) 64
MluCI AATT 3 cut(s) 5, 173, 530
MluNI TGGCCA 1 cut(s) 64
Mly113I GGCGCC 1 cut(s) 374
MlyI GAGTC 3 cut(s) 46, 77, 301
MnlI CCTC 5 cut(s) 14, 196, 283, 379, 487
Mox20I TGGCCA 1 cut(s) 64
MroI TCCGGA 1 cut(s) 145
MroXI GAANNNNTTC 1 cut(s) 132
MscI TGGCCA 1 cut(s) 64
MseI TTAA 3 cut(s) 498, 513, 546
MslI CAYNNNNRTG 1 cut(s) 425
Msp20I TGGCCA 1 cut(s) 64
MspI CCGG 3 cut(s) 10, 146, 262
MwoI GCNNNNNNNGC 3 cut(s) 10, 472, 549
NarI GGCGCC 1 cut(s) 374
NcoI CCATGG 1 cut(s) 78
NdeII GATC 4 cut(s) 107, 111, 142, 182
NlaIII CATG 1 cut(s) 82
NlaIV GGNNCC 1 cut(s) 375
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 2 cut(s) 118, 398
PkrI GCNGC 1 cut(s) 237
PleI GAGTC 3 cut(s) 46, 77, 300
PluTI GGCGCC 1 cut(s) 377
PpsI GAGTC 3 cut(s) 46, 77, 300
PspN4I GGNNCC 1 cut(s) 375
PsuI RGATCY 1 cut(s) 182
RseI CAYNNNNRTG 1 cut(s) 425
SaqAI TTAA 3 cut(s) 498, 513, 546
SatI GCNGC 1 cut(s) 236
Sau3AI GATC 4 cut(s) 107, 111, 142, 182
SchI GAGTC 3 cut(s) 46, 77, 301
SetI ASST 8 cut(s) 51, 171, 240, 372, 390, 406, 477, 498
SfaNI GCATC 1 cut(s) 221
SfoI GGCGCC 1 cut(s) 375
SmiMI CAYNNNNRTG 1 cut(s) 425
Sse9I AATT 3 cut(s) 5, 173, 530
SsiI CCGC 1 cut(s) 233
SspDI GGCGCC 1 cut(s) 373
SspI AATATT 1 cut(s) 382
StyI CCWWGG 1 cut(s) 78
TaqI TCGA 4 cut(s) 26, 103, 110, 141
TasI AATT 3 cut(s) 5, 173, 530
TfiI GAWTC 2 cut(s) 118, 398
Tru1I TTAA 3 cut(s) 498, 513, 546
Tru9I TTAA 3 cut(s) 498, 513, 546
TseI GCWGC 1 cut(s) 235
TspDTI ATGAA 1 cut(s) 428
TspGWI ACGGA 1 cut(s) 45
XapI RAATTY 2 cut(s) 173, 530
XmnI GAANNNNTTC 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.