FvH4_4g00540
ERF Family

Mitochondrial transcription termination factor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000115
Physical Location & Seq
Reverse (-)
481016 .. 483914
2899 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00540.t2

Sequence Viewer

Length: 1176 bp
ATGGTGGTGGCTCTCAGATTAGGGTACCCAATAATTTTATGCAGATTGGTTTCTTCCAGGACCCAAAGTTTGGGTCTTGGAAATCTAAAACCCTTCAATGTTTCTCCTCAGAATCACAGAAGACCCATCAGCTCAGAAAGCTCAAAGAAAGCCAGTTTCACAGTCAATTACCTCATAAAATCATGTGGGTTGTCCCCAGAAGAAGCAAATCTGGCAGCCACCAAGGTGGAGCTTCAATCCCCAAAAGGAGCAGACTCTGTTTTGGCTCTTCTGAGCAGCCATGGGTTATCTGAAACCCAGATCTTAAGGGTGGTTAGATCATACCCAAGAGTCCTTGTTGCTGATCCTGAGAAGACCCTTGCGCCCAAGATTGAATTTTTCAGCTCTGTTGGGCTCTCAAGGGTGGACCTTGCTAGAGTGTTGACTTTTAATCCACAACTTCTGTCAAGAAGCTTGGAGAATCAGATTGTGCCATCTTACAATTTGCTCAGGAGTTTGATTTCGGAGGAGAATGTTGTGGCGGTTTTAAAGCGCAGGTCTTGGTTGTTCTTGGAGAATCATTCAAGGAATGTGATGCCTAACATTGAGCTTCTGAGAGAGTTGGGTATGCCCAGAGCATGCATGTCTCTGTTGGTTGCTCATGACACTCAAGTGTTGATGCATAATCATGAGGACCTTGCTCAGGTGATAGATGAGGTTAGGGGTATGGGATTTGATTTGAAGAAGTCAACTTTTGTTGTAGCATTGAGGGCATTGTGTGGGAAGAGCTATAGGGCTATATGGAATCGAAATCGAGAGATTTATAAAAAATGTTGGGGTTGGTCTGATGATGATGTTCTCTCTGCTTTTAGGAAGAGCCCTCAGTGTATGATTTTGTCTGAGAAGAAACTTATGGAGACAATGGATTTTCTGGTGAATAAGATGGGATGGCCTGCAGCAATGATTCCCACATTCCCTGTCATTTTGTGTTTCAGTTTGGAGAATAGGATCATCCCGAGGTGTTCAGTTATCAAAGTTTTGATGAAGAAAGGATTGGTAGATGAAAACATGAGTCTGGCTTATGCGGTGCTGCCGGCAGAGAAGCGATTCTTGGAGAGGTTCGTGACCAGATATCTCAGCCAAGTGCTTAATCTGATGAGTGTGTATGAAGGGGAACTTAATGTGCAGGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

392

Amino Acids

44.21

Weight (kDa)

9.4

Isoelectric Point (pI)

60.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 88 - 239 3.7e-23 mTERF
mTERF PF02536 271 - 363 3.1e-17 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 804
Acc36I ACCTGC 1 cut(s) 525
Acc65I GGTACC 1 cut(s) 24
AccB1I GGYRCC 1 cut(s) 24
AccB7I CCANNNNNTGG 1 cut(s) 70
AciI CCGC 2 cut(s) 521, 1064
AclWI GGATC 2 cut(s) 338, 995
AcsI RAATTY 1 cut(s) 374
AfaI GTAC 1 cut(s) 26
AfiI CCNNNNNNNGG 2 cut(s) 70, 682
AflII CTTAAG 1 cut(s) 304
AgsI TTSAA 5 cut(s) 97, 236, 374, 564, 721
AjnI CCWGG 1 cut(s) 56
AjuI GAANNNNNNNTTGG 4 cut(s) 1016, 1048, 1073, 1105
AleI CACNNNNGTG 2 cut(s) 224, 650
AluBI AGCT 7 cut(s) 132, 141, 232, 384, 453, 589, 768
AluI AGCT 7 cut(s) 132, 141, 232, 384, 453, 589, 768
Alw26I GTCTC 2 cut(s) 630, 890
AlwI GGATC 2 cut(s) 338, 995
AlwNI CAGNNNCTG 1 cut(s) 257
Ama87I CYCGRG 1 cut(s) 994
AoxI GGCC 1 cut(s) 929
ApeKI GCWGC 4 cut(s) 215, 276, 935, 1069
ApoI RAATTY 1 cut(s) 374
ArsI GACNNNNNNTTYG 4 cut(s) 52, 58, 84, 90
Asp700I GAANNNNTTC 1 cut(s) 1085
Asp718I GGTACC 1 cut(s) 24
AspLEI GCGC 2 cut(s) 364, 534
AspS9I GGNCC 3 cut(s) 60, 406, 673
AsuHPI GGTGA 2 cut(s) 697, 925
AvaI CYCGRG 1 cut(s) 994
AvaII GGWCC 3 cut(s) 60, 406, 673
BanI GGYRCC 1 cut(s) 24
BanII GRGCYC 2 cut(s) 396, 860
BbsI GAAGAC 2 cut(s) 127, 359
BbvI GCAGC 4 cut(s) 227, 288, 947, 1056
BccI CCATC 4 cut(s) 134, 481, 916, 921
BciT130I CCWGG 1 cut(s) 58
BcoDI GTCTC 2 cut(s) 630, 890
BfaI CTAG 1 cut(s) 414
BfmI CTRYAG 2 cut(s) 769, 933
BfrI CTTAAG 1 cut(s) 304
BfuAI ACCTGC 1 cut(s) 525
BglII AGATCT 1 cut(s) 300
BisI GCNGC 4 cut(s) 216, 277, 936, 1070
BlsI GCNGC 4 cut(s) 217, 278, 937, 1071
Bme1390I CCNGG 1 cut(s) 58
Bme18I GGWCC 3 cut(s) 60, 406, 673
BmeT110I CYCGRG 1 cut(s) 994
BmgT120I GGNCC 3 cut(s) 60, 406, 673
BmiI GGNNCC 2 cut(s) 26, 62
BmrFI CCNGG 1 cut(s) 58
BmsI GCATC 2 cut(s) 564, 648
BpiI GAAGAC 2 cut(s) 127, 359
Bpu10I CCTNAGC 2 cut(s) 488, 681
BpuEI CTTGAG 2 cut(s) 382, 633
BsaJI CCNNGG 3 cut(s) 222, 280, 995
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 682
Bse118I RCCGGY 1 cut(s) 1072
Bse1I ACTGG 1 cut(s) 153
Bse3DI GCAATG 1 cut(s) 945
BseBI CCWGG 1 cut(s) 58
BseDI CCNNGG 3 cut(s) 222, 280, 995
BseGI GGATG 3 cut(s) 932, 990, 1174
BseLI CCNNNNNNNGG 2 cut(s) 70, 682
BseMI GCAATG 1 cut(s) 945
BseNI ACTGG 1 cut(s) 153
BseRI GAGGAG 2 cut(s) 96, 521
BseXI GCAGC 4 cut(s) 227, 288, 947, 1056
BshFI GGCC 1 cut(s) 931
BshNI GGYRCC 1 cut(s) 24
BsiHKCI CYCGRG 1 cut(s) 994
BsiSI CCGG 1 cut(s) 1073
BslFI GGGAC 1 cut(s) 178
BslI CCNNNNNNNGG 2 cut(s) 70, 682
BsmAI GTCTC 2 cut(s) 630, 890
BsmFI GGGAC 1 cut(s) 178
BsnI GGCC 1 cut(s) 931
BsoBI CYCGRG 1 cut(s) 994
Bsp1286I GDGCHC 2 cut(s) 396, 860
Bsp143I GATC 4 cut(s) 300, 317, 343, 987
Bsp19I CCATGG 1 cut(s) 280
BspACI CCGC 2 cut(s) 521, 1064
BspANI GGCC 1 cut(s) 931
BspHI TCATGA 2 cut(s) 640, 667
BspLI GGNNCC 2 cut(s) 26, 62
BspMAI CTGCAG 1 cut(s) 937
BspMI ACCTGC 1 cut(s) 525
BspPI GGATC 2 cut(s) 338, 995
BspQI GCTCTTC 3 cut(s) 273, 758, 848
BspT107I GGYRCC 1 cut(s) 24
BspTI CTTAAG 1 cut(s) 304
BsrDI GCAATG 1 cut(s) 945
BsrFI RCCGGY 1 cut(s) 1072
BsrI ACTGG 1 cut(s) 153
BssAI RCCGGY 1 cut(s) 1072
BssECI CCNNGG 3 cut(s) 222, 280, 995
BssMI GATC 4 cut(s) 300, 317, 343, 987
BssT1I CCWWGG 2 cut(s) 222, 280
Bst2UI CCWGG 1 cut(s) 58
Bst4CI ACNGT 1 cut(s) 163
Bst6I CTCTTC 3 cut(s) 273, 758, 848
BstAFI CTTAAG 1 cut(s) 304
BstC8I GCNNGC 3 cut(s) 619, 933, 1074
BstDSI CCRYGG 1 cut(s) 280
BstENI CCTNNNNNAGG 1 cut(s) 680
BstF5I GGATG 3 cut(s) 932, 990, 1174
BstHHI GCGC 2 cut(s) 364, 534
BstKTI GATC 4 cut(s) 303, 320, 346, 990
BstMAI GTCTC 2 cut(s) 630, 890
BstMBI GATC 4 cut(s) 300, 317, 343, 987
BstMWI GCNNNNNNNGC 3 cut(s) 138, 212, 749
BstNI CCWGG 1 cut(s) 58
BstNSI RCATGY 2 cut(s) 621, 625
BstSCI CCNGG 1 cut(s) 56
BstSFI CTRYAG 2 cut(s) 769, 933
BstV1I GCAGC 4 cut(s) 227, 288, 947, 1056
BstV2I GAAGAC 2 cut(s) 127, 359
BstX2I RGATCY 1 cut(s) 300
BstXI CCANNNNNNTGG 1 cut(s) 226
BstYI RGATCY 1 cut(s) 300
BsuRI GGCC 1 cut(s) 931
BtgI CCRYGG 1 cut(s) 280
BtsCI GGATG 3 cut(s) 932, 990, 1174
BtsIMutI CAGTG 1 cut(s) 869
BveI ACCTGC 1 cut(s) 525
Cac8I GCNNGC 3 cut(s) 619, 933, 1074
CaiI CAGNNNCTG 1 cut(s) 257
CciI TCATGA 2 cut(s) 640, 667
CfoI GCGC 2 cut(s) 364, 534
Cfr10I RCCGGY 1 cut(s) 1072
Cfr13I GGNCC 3 cut(s) 60, 406, 673
Csp6I GTAC 1 cut(s) 25
CviAII CATG 7 cut(s) 183, 281, 618, 622, 641, 668, 1048
CviQI GTAC 1 cut(s) 25
DpnI GATC 4 cut(s) 302, 319, 345, 989
DpnII GATC 4 cut(s) 300, 317, 343, 987
DraI TTTAAA 1 cut(s) 528
Eam1104I CTCTTC 3 cut(s) 273, 758, 848
EarI CTCTTC 3 cut(s) 273, 758, 848
Eco130I CCWWGG 2 cut(s) 222, 280
Eco24I GRGCYC 2 cut(s) 396, 860
Eco32I GATATC 1 cut(s) 1112
Eco47I GGWCC 3 cut(s) 60, 406, 673
Eco88I CYCGRG 1 cut(s) 994
EcoNI CCTNNNNNAGG 1 cut(s) 680
EcoO109I RGGNCCY 2 cut(s) 60, 673
EcoRII CCWGG 1 cut(s) 56
EcoRV GATATC 1 cut(s) 1112
EcoT14I CCWWGG 2 cut(s) 222, 280
EcoT22I ATGCAT 2 cut(s) 623, 663
EcoT38I GRGCYC 2 cut(s) 396, 860
ErhI CCWWGG 2 cut(s) 222, 280
FaeI CATG 7 cut(s) 186, 284, 621, 625, 644, 671, 1051
FalI AAGNNNNNCTT 4 cut(s) 1073, 1105, 1140, 1172
FaqI GGGAC 1 cut(s) 178
FatI CATG 7 cut(s) 182, 280, 617, 621, 640, 667, 1047
Fnu4HI GCNGC 4 cut(s) 216, 277, 936, 1070
FokI GGATG 2 cut(s) 939, 977
FriOI GRGCYC 2 cut(s) 396, 860
Fsp4HI GCNGC 4 cut(s) 216, 277, 936, 1070
FspBI CTAG 1 cut(s) 414
GlaI GCGC 2 cut(s) 363, 533
GluI GCNGC 4 cut(s) 216, 277, 936, 1070
HaeIII GGCC 1 cut(s) 931
HapII CCGG 1 cut(s) 1073
HhaI GCGC 2 cut(s) 364, 534
Hin1II CATG 7 cut(s) 186, 284, 621, 625, 644, 671, 1051
Hin6I GCGC 2 cut(s) 362, 532
HinP1I GCGC 2 cut(s) 362, 532
HincII GTYRAC 2 cut(s) 423, 729
HindII GTYRAC 2 cut(s) 423, 729
HindIII AAGCTT 1 cut(s) 451
HinfI GANTC 9 cut(s) 112, 254, 330, 460, 556, 784, 943, 1051, 1086
HpaII CCGG 1 cut(s) 1073
HphI GGTGA 2 cut(s) 697, 925
Hpy166II GTNNAC 3 cut(s) 406, 423, 729
Hpy188III TCNNGA 8 cut(s) 347, 447, 490, 641, 668, 794, 994, 1102
Hpy8I GTNNAC 3 cut(s) 406, 423, 729
HpyAV CCTTC 2 cut(s) 103, 1142
HpyCH4III ACNGT 1 cut(s) 163
HpyCH4V TGCA 5 cut(s) 42, 621, 661, 935, 1165
HpyF10VI GCNNNNNNNGC 3 cut(s) 138, 212, 749
Hsp92II CATG 7 cut(s) 186, 284, 621, 625, 644, 671, 1051
HspAI GCGC 2 cut(s) 362, 532
KpnI GGTACC 1 cut(s) 28
KroI GCCGGC 1 cut(s) 1072
KroNI GCCGGC 1 cut(s) 1074
Kzo9I GATC 4 cut(s) 300, 317, 343, 987
LguI GCTCTTC 3 cut(s) 273, 758, 848
LmnI GCTCC 2 cut(s) 229, 248
Lsp1109I GCAGC 4 cut(s) 227, 288, 947, 1056
LweI GCATC 2 cut(s) 564, 648
MaeI CTAG 1 cut(s) 414
MaeIII GTNAC 1 cut(s) 1102
MalI GATC 4 cut(s) 302, 319, 345, 989
MboI GATC 4 cut(s) 300, 317, 343, 987
MflI RGATCY 1 cut(s) 300
MhlI GDGCHC 2 cut(s) 396, 860
MluCI AATT 4 cut(s) 33, 166, 374, 481
MlyI GAGTC 3 cut(s) 248, 339, 1060
MnlI CCTC 9 cut(s) 117, 182, 499, 664, 688, 741, 870, 990, 1089
Mph1103I ATGCAT 2 cut(s) 623, 663
MroNI GCCGGC 1 cut(s) 1072
MroXI GAANNNNTTC 1 cut(s) 1085
MseI TTAA 5 cut(s) 305, 429, 527, 1128, 1158
MslI CAYNNNNRTG 3 cut(s) 224, 650, 666
MspCI CTTAAG 1 cut(s) 304
MspI CCGG 1 cut(s) 1073
MspR9I CCNGG 1 cut(s) 58
MvaI CCWGG 1 cut(s) 58
MwoI GCNNNNNNNGC 3 cut(s) 138, 212, 749
NaeI GCCGGC 1 cut(s) 1074
NcoI CCATGG 1 cut(s) 280
NdeII GATC 4 cut(s) 300, 317, 343, 987
NgoMIV GCCGGC 1 cut(s) 1072
NlaIII CATG 7 cut(s) 186, 284, 621, 625, 644, 671, 1051
NlaIV GGNNCC 2 cut(s) 26, 62
NmuCI GTSAC 1 cut(s) 1102
NsiI ATGCAT 2 cut(s) 623, 663
NspI RCATGY 2 cut(s) 621, 625
OliI CACNNNNGTG 2 cut(s) 224, 650
PaeI GCATGC 1 cut(s) 621
PagI TCATGA 2 cut(s) 640, 667
PciSI GCTCTTC 3 cut(s) 273, 758, 848
PdiI GCCGGC 1 cut(s) 1074
PdmI GAANNNNTTC 1 cut(s) 1085
PfeI GAWTC 6 cut(s) 112, 460, 556, 784, 943, 1086
PflMI CCANNNNNTGG 1 cut(s) 70
PfoI TCCNGGA 1 cut(s) 56
PkrI GCNGC 4 cut(s) 217, 278, 937, 1071
PleI GAGTC 3 cut(s) 248, 338, 1059
PpsI GAGTC 3 cut(s) 248, 338, 1059
PpuMI RGGWCCY 2 cut(s) 60, 673
PsiI TTATAA 1 cut(s) 804
Psp5II RGGWCCY 2 cut(s) 60, 673
Psp6I CCWGG 1 cut(s) 56
PspGI CCWGG 1 cut(s) 56
PspN4I GGNNCC 2 cut(s) 26, 62
PspPI GGNCC 3 cut(s) 60, 406, 673
PspPPI RGGWCCY 2 cut(s) 60, 673
PstI CTGCAG 1 cut(s) 937
PstNI CAGNNNCTG 1 cut(s) 257
PsuI RGATCY 1 cut(s) 300
RsaI GTAC 1 cut(s) 26
RsaNI GTAC 1 cut(s) 25
RseI CAYNNNNRTG 3 cut(s) 224, 650, 666
SapI GCTCTTC 3 cut(s) 273, 758, 848
SaqAI TTAA 5 cut(s) 305, 429, 527, 1128, 1158
SatI GCNGC 4 cut(s) 216, 277, 936, 1070
Sau3AI GATC 4 cut(s) 300, 317, 343, 987
Sau96I GGNCC 3 cut(s) 60, 406, 673
SchI GAGTC 3 cut(s) 248, 339, 1060
ScrFI CCNGG 1 cut(s) 58
SduI GDGCHC 2 cut(s) 396, 860
SfaNI GCATC 2 cut(s) 564, 648
SfcI CTRYAG 2 cut(s) 769, 933
SinI GGWCC 3 cut(s) 60, 406, 673
SmiMI CAYNNNNRTG 3 cut(s) 224, 650, 666
SmlI CTYRAG 3 cut(s) 304, 397, 648
SmoI CTYRAG 3 cut(s) 304, 397, 648
SphI GCATGC 1 cut(s) 621
Sse9I AATT 4 cut(s) 33, 166, 374, 481
SsiI CCGC 2 cut(s) 521, 1064
SspMI CTAG 1 cut(s) 414
StyD4I CCNGG 1 cut(s) 56
StyI CCWWGG 2 cut(s) 222, 280
TaaI ACNGT 1 cut(s) 163
TaqI TCGA 2 cut(s) 787, 793
TasI AATT 4 cut(s) 33, 166, 374, 481
TfiI GAWTC 6 cut(s) 112, 460, 556, 784, 943, 1086
Tru1I TTAA 5 cut(s) 305, 429, 527, 1128, 1158
Tru9I TTAA 5 cut(s) 305, 429, 527, 1128, 1158
TscAI CASTG 1 cut(s) 869
TseFI GTSAC 1 cut(s) 1102
TseI GCWGC 4 cut(s) 215, 276, 935, 1069
Tsp45I GTSAC 1 cut(s) 1102
TspDTI ATGAA 3 cut(s) 1037, 1056, 1161
TspRI CASTG 1 cut(s) 869
Van91I CCANNNNNTGG 1 cut(s) 70
Vha464I CTTAAG 1 cut(s) 304
VpaK11BI GGWCC 3 cut(s) 60, 406, 673
XagI CCTNNNNNAGG 1 cut(s) 680
XapI RAATTY 1 cut(s) 374
XceI RCATGY 2 cut(s) 621, 625
XmnI GAANNNNTTC 1 cut(s) 1085
XspI CTAG 1 cut(s) 414
Zsp2I ATGCAT 2 cut(s) 623, 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.