Rroxscaffold_7G00174470
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000115
Physical Location & Seq
Reverse (-)
14127314 .. 14128480
1167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00174470.1

Sequence Viewer

Length: 1167 bp
ATGGCGCGCCCGGCTCCTCCCTTTTCAGTAAGAGCCTCAGATTTTCTCTACTGTTTTGCAGAAATGGGGCACCCAGTGGAGGGATTTGCTTCACATTTTGGTAGAAGACTGATCAGCAGCTCCGAAATCCCAGCCGGCCAAGATGATTCTACAGTCTCCTACCTGGTTGACTCGTGTGGATTGTCCCCAGAATCCGCTGTTCTAGTATCCCACAAGGTAAAGCTTCAATCTTTAGAGAAAGCAGACTCTGTTTTAGCCCTTTTGAGAGAGTATGAATTCTCAGGAACCCAGATTTCAACTCTTGTGCGGAGACACCCTAGAATTCTGTTGGCCGATGCCAAGAAAACTCTTGCGCCGAAGCTTGAGTTCTTCTGCTCCGTAGGAATGTCAAGGCTCGACCTTGCAAAAACTGTGACCCACAGCCAATCGATCTTGGACCGAAGCTTAGAAAACCATATTGTACCCTCTTTTAATTTGCTCAAGGATGTGGTGCACTCTGATGTCAAGGTCCTCGGCATTTTGAAGTGCAGCCCATGGATTTTCAGGCAAAAGCTATCCAAGACTATGATGCCCAATATTGAGCTTCTGAGAGCATTAGGCATGCCCCAGTCGTCTATCGCTAGGTTGATAACATATTATGTTCAGATTGTGATGAAGGAGCCTGAATCGTTCAGTCAACTTGTGGGTGAAGTCGAACAATTGGGATTTGACCTTAGAAAGACGTTCTTTGTGCAAGCCATGCTCGCATTATCTGGGAAGAACAAGACGACATGGAAGCGAAATGAAGAGGCTTATAGGAGGTGGGGTTGGTCGGATAATGATATTCTTTCTGCCTTCAGGTTGTATCCACTGTGCATGACCAAGTCTGAGAAGAAAATAATGGGAACAATGGATTTCTTAGTGAACAAGATGGGATGGCATTCCCAGAAGATTGCAAAATGTCCCCATGTTTTGTGTTTCAGTTTTGAGAATAGAATCATCCCAAGGTTTTCGGTTGTTAAAGTTTTGATGTTGAAAGGACTAGTAGAAGAGGAAAAGTTGAGTTTGTCTACTATTGTTGCGATTCCAGAAAACTACTTCTTGAATAAGTTTGTGACCACTAATCTGCGCCTAGTACCTGAATTGTTAAATGTGTACCACGGCAAAGTGGATGTGCAGGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

388

Amino Acids

43.98

Weight (kDa)

9.17

Isoelectric Point (pI)

53.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 85 - 241 6.2e-23 mTERF
mTERF PF02536 251 - 360 2.2e-14 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 69
AccI GTMKAC 1 cut(s) 1049
AccII CGCG 1 cut(s) 7
AciI CCGC 2 cut(s) 195, 307
AcoI YGGCCR 2 cut(s) 136, 330
AcsI RAATTY 2 cut(s) 275, 321
AcuI CTGAAG 1 cut(s) 820
AdeI CACNNNGTG 1 cut(s) 76
AfaI GTAC 3 cut(s) 462, 1116, 1136
AfiI CCNNNNNNNGG 2 cut(s) 79, 80
AgsI TTSAA 5 cut(s) 227, 297, 523, 1015, 1084
AhlI ACTAGT 1 cut(s) 1021
AjnI CCWGG 1 cut(s) 162
AluBI AGCT 6 cut(s) 120, 223, 361, 444, 553, 583
AluI AGCT 6 cut(s) 120, 223, 361, 444, 553, 583
Alw21I GWGCWC 1 cut(s) 495
Alw26I GTCTC 2 cut(s) 160, 304
Alw44I GTGCAC 1 cut(s) 491
AlwNI CAGNNNCTG 1 cut(s) 248
AoxI GGCC 2 cut(s) 136, 330
ApaLI GTGCAC 1 cut(s) 491
ApeKI GCWGC 2 cut(s) 117, 528
ApoI RAATTY 2 cut(s) 275, 321
AscI GGCGCGCC 1 cut(s) 5
AspLEI GCGC 4 cut(s) 7, 9, 355, 1110
AspS9I GGNCC 2 cut(s) 436, 508
AsuC2I CCSGG 1 cut(s) 11
AsuHPI GGTGA 1 cut(s) 698
AvaII GGWCC 2 cut(s) 436, 508
BaeGI GKGCMC 2 cut(s) 72, 495
BanI GGYRCC 1 cut(s) 69
BauI CACGAG 1 cut(s) 172
BbsI GAAGAC 1 cut(s) 112
Bbv12I GWGCWC 1 cut(s) 495
BbvI GCAGC 2 cut(s) 129, 540
BccI CCATC 2 cut(s) 904, 909
BceAI ACGGC 1 cut(s) 1156
BciT130I CCWGG 1 cut(s) 164
BciVI GTATCC 2 cut(s) 217, 855
BclI TGATCA 1 cut(s) 111
BcnI CCSGG 1 cut(s) 11
BcoDI GTCTC 2 cut(s) 160, 304
BcuI ACTAGT 1 cut(s) 1021
BfaI CTAG 5 cut(s) 203, 318, 621, 1022, 1112
BfmI CTRYAG 1 cut(s) 150
BfuI GTATCC 2 cut(s) 217, 855
BisI GCNGC 2 cut(s) 118, 529
BlsI GCNGC 2 cut(s) 119, 530
Bme1390I CCNGG 2 cut(s) 11, 164
Bme18I GGWCC 2 cut(s) 436, 508
BmgT120I GGNCC 2 cut(s) 436, 508
BmiI GGNNCC 4 cut(s) 15, 71, 286, 660
BmrFI CCNGG 2 cut(s) 11, 164
BmrI ACTGGG 2 cut(s) 68, 601
BmsI GCATC 2 cut(s) 325, 558
BmuI ACTGGG 2 cut(s) 68, 601
BpiI GAAGAC 1 cut(s) 112
BpuEI CTTGAG 2 cut(s) 383, 464
BpuMI CCSGG 1 cut(s) 11
Bsa29I ATCGAT 1 cut(s) 428
BsaJI CCNNGG 4 cut(s) 511, 533, 983, 1138
BsaXI ACNNNNNCTCC 2 cut(s) 790, 820
Bsc4I CCNNNNNNNGG 2 cut(s) 79, 80
Bse118I RCCGGY 1 cut(s) 134
Bse1I ACTGG 2 cut(s) 74, 607
BseBI CCWGG 1 cut(s) 164
BseCI ATCGAT 1 cut(s) 428
BseDI CCNNGG 4 cut(s) 511, 533, 983, 1138
BseGI GGATG 5 cut(s) 490, 920, 978, 1156, 1165
BseLI CCNNNNNNNGG 2 cut(s) 79, 80
BseMII CTCAG 4 cut(s) 51, 294, 578, 858
BseNI ACTGG 2 cut(s) 74, 607
BsePI GCGCGC 1 cut(s) 5
BseRI GAGGAG 1 cut(s) 6
BseSI GKGCMC 2 cut(s) 72, 495
BseXI GCAGC 2 cut(s) 129, 540
BseYI CCCAGC 1 cut(s) 130
BsgI GTGCAG 1 cut(s) 547
Bsh1236I CGCG 1 cut(s) 7
BshFI GGCC 2 cut(s) 138, 332
BshNI GGYRCC 1 cut(s) 69
BshVI ATCGAT 1 cut(s) 428
BsiHKAI GWGCWC 1 cut(s) 495
BsiSI CCGG 2 cut(s) 11, 135
BslFI GGGAC 2 cut(s) 169, 927
BslI CCNNNNNNNGG 2 cut(s) 79, 80
BsmAI GTCTC 2 cut(s) 160, 304
BsmFI GGGAC 2 cut(s) 169, 927
BsmI GAATGC 1 cut(s) 919
BsnI GGCC 2 cut(s) 138, 332
Bsp1286I GDGCHC 2 cut(s) 72, 495
Bsp143I GATC 2 cut(s) 111, 429
Bsp19I CCATGG 1 cut(s) 533
BspACI CCGC 2 cut(s) 195, 307
BspANI GGCC 2 cut(s) 138, 332
BspCNI CTCAG 4 cut(s) 50, 293, 579, 859
BspDI ATCGAT 1 cut(s) 428
BspFNI CGCG 1 cut(s) 7
BspLI GGNNCC 4 cut(s) 15, 71, 286, 660
BspT107I GGYRCC 1 cut(s) 69
BsrFI RCCGGY 1 cut(s) 134
BsrI ACTGG 2 cut(s) 74, 607
BssAI RCCGGY 1 cut(s) 134
BssECI CCNNGG 4 cut(s) 511, 533, 983, 1138
BssHII GCGCGC 1 cut(s) 5
BssMI GATC 2 cut(s) 111, 429
BssSI CACGAG 1 cut(s) 172
BssT1I CCWWGG 2 cut(s) 533, 983
Bst2BI CACGAG 1 cut(s) 172
Bst2UI CCWGG 1 cut(s) 164
Bst4CI ACNGT 4 cut(s) 53, 154, 412, 852
Bst6I CTCTTC 2 cut(s) 780, 1023
BstAPI GCANNNNNTGC 1 cut(s) 739
BstC8I GCNNGC 5 cut(s) 7, 136, 602, 735, 744
BstDEI CTNAG 7 cut(s) 37, 280, 445, 587, 713, 867, 898
BstDSI CCRYGG 2 cut(s) 533, 1138
BstF5I GGATG 5 cut(s) 490, 920, 978, 1156, 1165
BstFNI CGCG 1 cut(s) 7
BstHHI GCGC 4 cut(s) 7, 9, 355, 1110
BstKTI GATC 2 cut(s) 114, 432
BstMAI GTCTC 2 cut(s) 160, 304
BstMBI GATC 2 cut(s) 111, 429
BstMWI GCNNNNNNNGC 3 cut(s) 11, 739, 743
BstNI CCWGG 1 cut(s) 164
BstNSI RCATGY 1 cut(s) 604
BstSCI CCNGG 2 cut(s) 9, 162
BstSFI CTRYAG 1 cut(s) 150
BstSLI GKGCMC 2 cut(s) 72, 495
BstUI CGCG 1 cut(s) 7
BstV1I GCAGC 2 cut(s) 129, 540
BstV2I GAAGAC 1 cut(s) 112
Bsu15I ATCGAT 1 cut(s) 428
BsuI GTATCC 2 cut(s) 217, 855
BsuRI GGCC 2 cut(s) 138, 332
BsuTUI ATCGAT 1 cut(s) 428
BtgI CCRYGG 2 cut(s) 533, 1138
BtsCI GGATG 5 cut(s) 490, 920, 978, 1156, 1165
BtsIMutI CAGTG 2 cut(s) 81, 848
Cac8I GCNNGC 5 cut(s) 7, 136, 602, 735, 744
CaiI CAGNNNCTG 1 cut(s) 248
CfoI GCGC 4 cut(s) 7, 9, 355, 1110
Cfr10I RCCGGY 1 cut(s) 134
Cfr13I GGNCC 2 cut(s) 436, 508
ClaI ATCGAT 1 cut(s) 428
CsiI ACCWGGT 1 cut(s) 162
Csp6I GTAC 3 cut(s) 461, 1115, 1135
CviAII CATG 6 cut(s) 534, 601, 739, 771, 856, 947
CviQI GTAC 3 cut(s) 461, 1115, 1135
DdeI CTNAG 7 cut(s) 37, 280, 445, 587, 713, 867, 898
DpnI GATC 2 cut(s) 113, 431
DpnII GATC 2 cut(s) 111, 429
DraIII CACNNNGTG 1 cut(s) 76
EaeI YGGCCR 2 cut(s) 136, 330
Eam1104I CTCTTC 2 cut(s) 780, 1023
EarI CTCTTC 2 cut(s) 780, 1023
Eco130I CCWWGG 2 cut(s) 533, 983
Eco47I GGWCC 2 cut(s) 436, 508
Eco57I CTGAAG 1 cut(s) 820
EcoO109I RGGNCCY 1 cut(s) 508
EcoRI GAATTC 2 cut(s) 275, 321
EcoRII CCWGG 1 cut(s) 162
EcoT14I CCWWGG 2 cut(s) 533, 983
ErhI CCWWGG 2 cut(s) 533, 983
FaeI CATG 6 cut(s) 537, 604, 742, 774, 859, 950
FalI AAGNNNNNCTT 2 cut(s) 710, 742
FaqI GGGAC 2 cut(s) 169, 927
FatI CATG 6 cut(s) 533, 600, 738, 770, 855, 946
FbaI TGATCA 1 cut(s) 111
FblI GTMKAC 1 cut(s) 1049
Fnu4HI GCNGC 2 cut(s) 118, 529
FokI GGATG 4 cut(s) 497, 927, 965, 1163
Fsp4HI GCNGC 2 cut(s) 118, 529
FspBI CTAG 5 cut(s) 203, 318, 621, 1022, 1112
GlaI GCGC 4 cut(s) 6, 8, 354, 1109
GluI GCNGC 2 cut(s) 118, 529
GsaI CCCAGC 1 cut(s) 134
HaeIII GGCC 2 cut(s) 138, 332
HapII CCGG 2 cut(s) 11, 135
HhaI GCGC 4 cut(s) 7, 9, 355, 1110
Hin1II CATG 6 cut(s) 537, 604, 742, 774, 859, 950
Hin6I GCGC 4 cut(s) 5, 7, 353, 1108
HinP1I GCGC 4 cut(s) 5, 7, 353, 1108
HincII GTYRAC 2 cut(s) 169, 677
HindII GTYRAC 2 cut(s) 169, 677
HindIII AAGCTT 3 cut(s) 221, 359, 442
HinfI GANTC 7 cut(s) 146, 170, 191, 245, 665, 975, 1063
HpaII CCGG 2 cut(s) 11, 135
HphI GGTGA 1 cut(s) 698
Hpy166II GTNNAC 6 cut(s) 169, 493, 677, 904, 1050, 1135
Hpy188I TCNGA 7 cut(s) 40, 124, 499, 588, 645, 814, 868
Hpy188III TCNNGA 3 cut(s) 282, 1067, 1081
Hpy8I GTNNAC 6 cut(s) 169, 493, 677, 904, 1050, 1135
HpyAV CCTTC 2 cut(s) 649, 844
HpyCH4III ACNGT 4 cut(s) 53, 154, 412, 852
HpyCH4IV ACGT 1 cut(s) 722
HpyCH4V TGCA 8 cut(s) 59, 404, 493, 528, 733, 855, 935, 1156
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 739, 743
HpyF3I CTNAG 7 cut(s) 37, 280, 445, 587, 713, 867, 898
HpySE526I ACGT 1 cut(s) 722
Hsp92II CATG 6 cut(s) 537, 604, 742, 774, 859, 950
HspAI GCGC 4 cut(s) 5, 7, 353, 1108
KroI GCCGGC 1 cut(s) 134
KroNI GCCGGC 1 cut(s) 136
Ksp22I TGATCA 1 cut(s) 111
Kzo9I GATC 2 cut(s) 111, 429
LmnI GCTCC 4 cut(s) 19, 125, 380, 658
Lsp1109I GCAGC 2 cut(s) 129, 540
LweI GCATC 2 cut(s) 325, 558
MabI ACCWGGT 1 cut(s) 162
MaeI CTAG 5 cut(s) 203, 318, 621, 1022, 1112
MaeII ACGT 1 cut(s) 722
MaeIII GTNAC 2 cut(s) 412, 1093
MalI GATC 2 cut(s) 113, 431
MboI GATC 2 cut(s) 111, 429
MboII GAAGA 7 cut(s) 117, 361, 769, 797, 883, 940, 1040
MfeI CAATTG 1 cut(s) 698
MhlI GDGCHC 2 cut(s) 72, 495
MluCI AATT 5 cut(s) 275, 321, 472, 698, 1121
MlyI GAGTC 2 cut(s) 164, 239
MmeI TCCRAC 1 cut(s) 792
MnlI CCTC 8 cut(s) 27, 46, 73, 475, 521, 781, 792, 1024
MroNI GCCGGC 1 cut(s) 134
MseI TTAA 3 cut(s) 471, 999, 1127
MslI CAYNNNNRTG 1 cut(s) 498
MspA1I CMGCKG 1 cut(s) 197
MspI CCGG 2 cut(s) 11, 135
MspR9I CCNGG 2 cut(s) 11, 164
MunI CAATTG 1 cut(s) 698
Mva1269I GAATGC 1 cut(s) 919
MvaI CCWGG 1 cut(s) 164
MvnI CGCG 1 cut(s) 7
MwoI GCNNNNNNNGC 3 cut(s) 11, 739, 743
NaeI GCCGGC 1 cut(s) 136
NciI CCSGG 1 cut(s) 11
NcoI CCATGG 1 cut(s) 533
NdeII GATC 2 cut(s) 111, 429
NgoMIV GCCGGC 1 cut(s) 134
NlaIII CATG 6 cut(s) 537, 604, 742, 774, 859, 950
NlaIV GGNNCC 4 cut(s) 15, 71, 286, 660
NmeAIII GCCGAG 1 cut(s) 492
NmuCI GTSAC 2 cut(s) 412, 1093
NspI RCATGY 1 cut(s) 604
PaeI GCATGC 1 cut(s) 604
PalAI GGCGCGCC 1 cut(s) 5
PauI GCGCGC 1 cut(s) 5
PctI GAATGC 1 cut(s) 919
PdiI GCCGGC 1 cut(s) 136
PfeI GAWTC 5 cut(s) 146, 191, 665, 975, 1063
PflFI GACNNNGTC 1 cut(s) 862
PkrI GCNGC 2 cut(s) 119, 530
PleI GAGTC 2 cut(s) 164, 239
PpsI GAGTC 2 cut(s) 164, 239
PpuMI RGGWCCY 1 cut(s) 508
Psp5II RGGWCCY 1 cut(s) 508
Psp6I CCWGG 1 cut(s) 162
PspFI CCCAGC 1 cut(s) 130
PspGI CCWGG 1 cut(s) 162
PspN4I GGNNCC 4 cut(s) 15, 71, 286, 660
PspPI GGNCC 2 cut(s) 436, 508
PspPPI RGGWCCY 1 cut(s) 508
PstNI CAGNNNCTG 1 cut(s) 248
PsyI GACNNNGTC 1 cut(s) 862
PteI GCGCGC 1 cut(s) 5
RsaI GTAC 3 cut(s) 462, 1116, 1136
RsaNI GTAC 3 cut(s) 461, 1115, 1135
RseI CAYNNNNRTG 1 cut(s) 498
SaqAI TTAA 3 cut(s) 471, 999, 1127
SatI GCNGC 2 cut(s) 118, 529
Sau3AI GATC 2 cut(s) 111, 429
Sau96I GGNCC 2 cut(s) 436, 508
SchI GAGTC 2 cut(s) 164, 239
ScrFI CCNGG 2 cut(s) 11, 164
SduI GDGCHC 2 cut(s) 72, 495
SexAI ACCWGGT 1 cut(s) 162
SfaNI GCATC 2 cut(s) 325, 558
SfcI CTRYAG 1 cut(s) 150
SgsI GGCGCGCC 1 cut(s) 5
SinI GGWCC 2 cut(s) 436, 508
SmiMI CAYNNNNRTG 1 cut(s) 498
SmlI CTYRAG 2 cut(s) 362, 479
SmoI CTYRAG 2 cut(s) 362, 479
SpeI ACTAGT 1 cut(s) 1021
SphI GCATGC 1 cut(s) 604
Sse9I AATT 5 cut(s) 275, 321, 472, 698, 1121
SsiI CCGC 2 cut(s) 195, 307
SspI AATATT 1 cut(s) 577
SspMI CTAG 5 cut(s) 203, 318, 621, 1022, 1112
StyD4I CCNGG 2 cut(s) 9, 162
StyI CCWWGG 2 cut(s) 533, 983
TaaI ACNGT 4 cut(s) 53, 154, 412, 852
TaiI ACGT 1 cut(s) 725
TaqI TCGA 3 cut(s) 396, 428, 693
TaqII GACCGA 1 cut(s) 453
TasI AATT 5 cut(s) 275, 321, 472, 698, 1121
TfiI GAWTC 5 cut(s) 146, 191, 665, 975, 1063
Tru1I TTAA 3 cut(s) 471, 999, 1127
Tru9I TTAA 3 cut(s) 471, 999, 1127
TscAI CASTG 2 cut(s) 81, 855
TseFI GTSAC 2 cut(s) 412, 1093
TseI GCWGC 2 cut(s) 117, 528
Tsp45I GTSAC 2 cut(s) 412, 1093
TspDTI ATGAA 3 cut(s) 288, 668, 798
TspGWI ACGGA 1 cut(s) 367
TspRI CASTG 2 cut(s) 81, 855
Tth111I GACNNNGTC 1 cut(s) 862
VneI GTGCAC 1 cut(s) 491
VpaK11BI GGWCC 2 cut(s) 436, 508
XapI RAATTY 2 cut(s) 275, 321
XceI RCATGY 1 cut(s) 604
XmiI GTMKAC 1 cut(s) 1049
XspI CTAG 5 cut(s) 203, 318, 621, 1022, 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.