MD07G1022900.v1.1
ERF Family

Mitochondrial transcription termination factor family protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
1896639 .. 1898372
1734 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1022900.v1.1.491

Sequence Viewer

Length: 966 bp
ATGGGTTCTAGAGACCTGAGAGCCACTACTAGGGTTCTGGGGTTTGCCGTTAGAAATCGTTCGTCGCCGGCAGCATCTAACATGGTTCTACTCTGCAGCTCAAAGACCCCCAGGTTATACTCTTTAATATTTTCCTCTCCATTTGCTTCCAGAAACAAGAGATTAGTGATTGAAAATGTAAAACCCTCACTTTCTTCTCTTCAAAACCAGTTGCTTTACAGACCCATCACCTCAAAAATCCCAGAAAACCAACACAATTTCACCGTCGATTACCTCATAAGGTCATGTGGGTTGTCCCCAAAAGCTGCAATTTCAGCGTCCAAAAGGCTCGAATTGCAAAACCCAGAAAGGGCAGACTCTAATGTGGCTCCGAATATTGGGCTGTTGAGAGAATTGGGTGTTTCCCGATCATGCATTTCTCTGATGCTAGCTCAATGCACCCAAACTCTGATGCTAAAGCCTGAAAATTTTGGTAAAGTTGTGGATGAGGTGAGGGCTAAGGGACTTGATCTTGGAAAAGCGACTTTCATGTTTGCACTACGCTCATTGTCTGGTAAGAATAGTAAGTTGATATGGGATCGAAGTCGGGAAGTTTACGGGAGTTGGGGTTGGTCTGAGGATGATATTCTCTTTGCTTTCAGGAAAAACCCGCAGTGTATGAATCTATCTGAGAAAAAAATAACGCTAGCAATGGATTTTTTTGTCAACAAGATGGGATGGCCATCGGGACTACTCATAAAGTGCCCAGCGGCTTTGTGCCTAAGTTTGGAGAATAGAATCATCCCAAGGTGTTCAGTTGTTAAAGTTTTGTTATTGAAAGGATTGATAAATGAAAATTTTAGCTTGAGTTATGTGTTATTGCCGGTGGAGAAGCAGTTCTTGGAGAGATTTGTGACCAGATACCTAGACCAAGTACCTCAACTGTTGAGTTTGTATCAAGGGAAAGTTGAAATCGAAGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

322

Amino Acids

36.11

Weight (kDa)

9.69

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 197 - 293 2.1e-15 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07900
fragaria_vesca FvH4_1g02670 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g08280 FvH4_1g28911 FvH4_2g24551 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g24560 FvH4_2g25031 FvH4_2g25040 FvH4_2g25050 FvH4_2g25080 FvH4_3g16800 FvH4_4g00540 FvH4_4g00540 FvH4_4g20540 FvH4_6g12320 FvH4_6g36580 FvH4_6g36580 FvH4_7g03240 FvH4_7g03270
malus_domestica MD02G1026800.v1.1 MD02G1278100.v1.1 MD02G1279500.v1.1 MD02G1279600.v1.1 MD02G1279800.v1.1 MD02G1279900.v1.1 MD02G1280100.v1.1 MD02G1280200.v1.1 MD02G1280500.v1.1 MD02G1280700.v1.1 MD02G1280800.v1.1 MD02G1281700.v1.1 MD02G1281800.v1.1 MD02G1281900.v1.1 MD02G1285600.v1.1 MD02G1285700.v1.1 MD03G1280700.v1.1 MD04G1005600.v1.1 MD07G1022900.v1.1 MD07G1032900.v1.1 MD07G1033000.v1.1 MD07G1046200.v1.1 MD07G1047400.v1.1 MD07G1047500.v1.1 MD07G1047600.v1.1 MD07G1047700.v1.1 MD07G1047900.v1.1 MD07G1048000.v1.1 MD07G1048100.v1.1 MD07G1050600.v1.1 MD11G1301600.v1.1 MD15G1168300.v1.1
prunus_persica Prupe.1G005300_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005800_v2.0.a1 Prupe.1G005900_v2.0.a1 Prupe.1G006000_v2.0.a1 Prupe.2G037000_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G037400_v2.0.a1 Prupe.2G040200_v2.0.a1 Prupe.2G040300_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G040400_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041000_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.2G041100_v2.0.a1 Prupe.7G248200_v2.0.a1 Prupe.8G255200_v2.0.a1
pyrus_communis pycom01g04780 pycom02g02190 pycom02g23830 pycom02g23970 pycom02g23980 pycom02g24000 pycom02g24010 pycom02g24020 pycom02g24030 pycom02g24040 pycom02g24290 pycom02g24300 pycom02g24310 pycom06g20690 pycom07g01740 pycom07g03330 pycom07g03440 pycom07g03450 pycom07g03480 pycom07g03490 pycom11g26420
rosa_chinensis RchiOBHm_Chr1g0325381 RchiOBHm_Chr1g0325491 RchiOBHm_Chr1g0325501 RchiOBHm_Chr1g0327641 RchiOBHm_Chr1g0327651 RchiOBHm_Chr2g0087701 RchiOBHm_Chr2g0130871 RchiOBHm_Chr3g0456231 RchiOBHm_Chr4g0385991 RchiOBHm_Chr6g0276761 RchiOBHm_Chr6g0285221 RchiOBHm_Chr6g0293011 RchiOBHm_Chr6g0293041 RchiOBHm_Chr6g0293051 RchiOBHm_Chr6g0293061 RchiOBHm_Chr6g0293101 RchiOBHm_Chr6g0293111 RchiOBHm_Chr6g0293121 RchiOBHm_Chr6g0293131 RchiOBHm_Chr7g0223561
rosa_laevigata RLG00000011974 RLG00000015894
rosa_multiflora Rmu_co8377771.1_g000001 Rmu_co8466941.1_g000001 Rmu_sc0000811.1_g000022 Rmu_sc0000811.1_g000023 Rmu_sc0000838.1_g000008 Rmu_sc0001788.1_g000002 Rmu_sc0001788.1_g000003 Rmu_sc0001788.1_g000004 Rmu_sc0001836.1_g000024 Rmu_sc0001836.1_g000025 Rmu_sc0001903.1_g000013 Rmu_sc0002247.1_g000010 Rmu_sc0002247.1_g000011 Rmu_sc0002826.1_g000016 Rmu_sc0003629.1_g000020 Rmu_sc0003874.1_g000015 Rmu_sc0004481.1_g000017 Rmu_sc0005212.1_g000007 Rmu_sc0005710.1_g000001 Rmu_sc0005823.1_g000013 Rmu_sc0006405.1_g000009 Rmu_sc0006405.1_g000010 Rmu_sc0006801.1_g000010 Rmu_sc0008168.1_g000005 Rmu_sc0014786.1_g000001 Rmu_sc0032118.1_g000001 Rmu_sc0032118.1_g000002 Rmu_ssc0000042.1_g000006
rosa_roxburghii Rroxscaffold_2G00111260 Rroxscaffold_3G00235580 Rroxscaffold_4G00322490 Rroxscaffold_4G00324780 Rroxscaffold_4G00324950 Rroxscaffold_5G00333760 Rroxscaffold_7G00174460 Rroxscaffold_7G00174470 Rroxscaffold_7G00191990
rosa_rugosa Rorug01G0051700 Rorug01G0052100 Rorug01G0069100 Rorug01G0165700 Rorug01G0478600 Rorug02G0311200 Rorug03G0305800.1 Rorug03G0305900.1 Rorug03G0306000 Rorug06G0103900 Rorug06G0232100 Rorug06G0232200 Rorug06G0232300 Rorug06G0232400.1 Rorug06G0232500 Rorug06G0232700
rosa_samantha Rh1AG066700 Rh1AG067400 Rh1AG067500 Rh1AG086200 Rh1AG086300 Rh1BG055100 Rh1BG068800 Rh1CG068800 Rh1CG083700 Rh1CG083800 Rh2AG032500 Rh2BG031600 Rh2BG353500 Rh2CG032000 Rh2CG332100 Rh2DG032000 Rh2DG371500 Rh4AG009800 Rh4BG006800 Rh4CG010600 Rh5AG192200 Rh6AG214100 Rh6AG283700 Rh6AG344800 Rh6AG344900 Rh6AG345000 Rh6AG345100 Rh6AG345200 Rh6AG345300 Rh6BG218900 Rh6BG245300 Rh6BG352300 Rh6BG352400 Rh6BG352600 Rh6BG352700 Rh6BG352800 Rh6BG353400 Rh6DG211600 Rh6DG279100 Rh6DG344900 Rh6DG345000 Rh6DG345100 Rh6DG345200 Rh6DG345300 Rh6DG345900 Rh7BG351900
rosa_wichuraiana Rw1G005450 Rw1G005580 Rw1G006730 Rw2G002540 Rw4G000160 Rw6G018720 Rw6G030090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 650, 749
AclWI GGATC 1 cut(s) 585
AcoI YGGCCR 1 cut(s) 719
AcsI RAATTY 2 cut(s) 466, 835
AfaI GTAC 1 cut(s) 915
AfiI CCNNNNNNNGG 4 cut(s) 30, 349, 377, 766
AgsI TTSAA 4 cut(s) 173, 203, 817, 950
AjnI CCWGG 1 cut(s) 110
AjuI GAANNNNNNNTTGG 2 cut(s) 863, 895
AloI GAACNNNNNNTCC 2 cut(s) 860, 892
AluBI AGCT 4 cut(s) 99, 305, 431, 843
AluI AGCT 4 cut(s) 99, 305, 431, 843
Alw26I GTCTC 1 cut(s) 6
AlwI GGATC 1 cut(s) 585
AoxI GGCC 1 cut(s) 719
ApeKI GCWGC 3 cut(s) 71, 96, 305
ApoI RAATTY 2 cut(s) 466, 835
Asp700I GAANNNNTTC 2 cut(s) 58, 875
AsuHPI GGTGA 3 cut(s) 220, 253, 502
AsuNHI GCTAGC 2 cut(s) 427, 685
BaeGI GKGCMC 1 cut(s) 746
BalI TGGCCA 1 cut(s) 721
BbvI GCAGC 3 cut(s) 83, 108, 292
BccI CCATC 4 cut(s) 233, 706, 711, 730
BceAI ACGGC 1 cut(s) 32
BciT130I CCWGG 1 cut(s) 112
BcoDI GTCTC 1 cut(s) 6
BfaI CTAG 5 cut(s) 9, 30, 428, 686, 905
BfmI CTRYAG 1 cut(s) 94
BisI GCNGC 4 cut(s) 72, 97, 306, 750
BlsI GCNGC 4 cut(s) 73, 98, 307, 751
Bme1390I CCNGG 1 cut(s) 112
BmiI GGNNCC 1 cut(s) 369
BmrFI CCNGG 1 cut(s) 112
BmsI GCATC 3 cut(s) 83, 414, 441
BmtI GCTAGC 2 cut(s) 431, 689
Bpu10I CCTNAGC 1 cut(s) 498
BpuEI CTTGAG 1 cut(s) 865
BsaBI GATNNNNATC 1 cut(s) 721
BsaI GGTCTC 1 cut(s) 6
BsaJI CCNNGG 2 cut(s) 110, 785
BsaXI ACNNNNNCTCC 4 cut(s) 592, 622, 860, 890
Bsc4I CCNNNNNNNGG 4 cut(s) 30, 349, 377, 766
Bse118I RCCGGY 2 cut(s) 67, 862
Bse1I ACTGG 1 cut(s) 208
Bse3DI GCAATG 1 cut(s) 696
Bse8I GATNNNNATC 1 cut(s) 721
BseBI CCWGG 1 cut(s) 112
BseDI CCNNGG 2 cut(s) 110, 785
BseGI GGATG 4 cut(s) 490, 625, 722, 780
BseJI GATNNNNATC 1 cut(s) 721
BseLI CCNNNNNNNGG 4 cut(s) 30, 349, 377, 766
BseMI GCAATG 1 cut(s) 696
BseMII CTCAG 3 cut(s) 8, 606, 660
BseNI ACTGG 1 cut(s) 208
BseSI GKGCMC 1 cut(s) 746
BseXI GCAGC 3 cut(s) 83, 108, 292
BseYI CCCAGC 1 cut(s) 745
BshFI GGCC 1 cut(s) 721
BsiSI CCGG 2 cut(s) 68, 863
BslFI GGGAC 3 cut(s) 280, 516, 741
BslI CCNNNNNNNGG 4 cut(s) 30, 349, 377, 766
BsmAI GTCTC 1 cut(s) 6
BsmFI GGGAC 3 cut(s) 280, 516, 741
BsnI GGCC 1 cut(s) 721
Bso31I GGTCTC 1 cut(s) 6
Bsp1286I GDGCHC 1 cut(s) 746
Bsp143I GATC 3 cut(s) 407, 508, 577
BspACI CCGC 2 cut(s) 650, 749
BspANI GGCC 1 cut(s) 721
BspCNI CTCAG 3 cut(s) 9, 607, 661
BspLI GGNNCC 1 cut(s) 369
BspMAI CTGCAG 1 cut(s) 98
BspOI GCTAGC 2 cut(s) 431, 689
BspPI GGATC 1 cut(s) 585
BspTNI GGTCTC 1 cut(s) 6
BsrDI GCAATG 1 cut(s) 696
BsrFI RCCGGY 2 cut(s) 67, 862
BsrI ACTGG 1 cut(s) 208
BssAI RCCGGY 2 cut(s) 67, 862
BssECI CCNNGG 2 cut(s) 110, 785
BssMI GATC 3 cut(s) 407, 508, 577
BssT1I CCWWGG 1 cut(s) 785
Bst2UI CCWGG 1 cut(s) 112
Bst4CI ACNGT 2 cut(s) 265, 924
Bst6I CTCTTC 1 cut(s) 204
BstC8I GCNNGC 3 cut(s) 69, 429, 687
BstDEI CTNAG 5 cut(s) 17, 498, 615, 669, 761
BstF5I GGATG 4 cut(s) 490, 625, 722, 780
BstKTI GATC 3 cut(s) 410, 511, 580
BstMAI GTCTC 1 cut(s) 6
BstMBI GATC 3 cut(s) 407, 508, 577
BstMWI GCNNNNNNNGC 2 cut(s) 314, 334
BstNI CCWGG 1 cut(s) 112
BstSCI CCNGG 1 cut(s) 110
BstSFI CTRYAG 1 cut(s) 94
BstSLI GKGCMC 1 cut(s) 746
BstV1I GCAGC 3 cut(s) 83, 108, 292
BsuRI GGCC 1 cut(s) 721
BtsCI GGATG 4 cut(s) 490, 625, 722, 780
BtsI GCAGTG 1 cut(s) 659
BtsIMutI CAGTG 1 cut(s) 659
Cac8I GCNNGC 3 cut(s) 69, 429, 687
Cfr10I RCCGGY 2 cut(s) 67, 862
CseI GACGC 1 cut(s) 306
Csp6I GTAC 1 cut(s) 914
CviAII CATG 4 cut(s) 82, 285, 411, 529
CviQI GTAC 1 cut(s) 914
DdeI CTNAG 5 cut(s) 17, 498, 615, 669, 761
DpnI GATC 3 cut(s) 409, 510, 579
DpnII GATC 3 cut(s) 407, 508, 577
EaeI YGGCCR 1 cut(s) 719
Eam1104I CTCTTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 204
Eco130I CCWWGG 1 cut(s) 785
Eco31I GGTCTC 1 cut(s) 6
EcoRII CCWGG 1 cut(s) 110
EcoT14I CCWWGG 1 cut(s) 785
EcoT22I ATGCAT 1 cut(s) 416
ErhI CCWWGG 1 cut(s) 785
FaeI CATG 4 cut(s) 85, 288, 414, 532
FalI AAGNNNNNCTT 2 cut(s) 863, 895
FaqI GGGAC 3 cut(s) 280, 516, 741
FatI CATG 4 cut(s) 81, 284, 410, 528
FauI CCCGC 1 cut(s) 657
Fnu4HI GCNGC 4 cut(s) 72, 97, 306, 750
FokI GGATG 4 cut(s) 497, 632, 729, 767
Fsp4HI GCNGC 4 cut(s) 72, 97, 306, 750
FspBI CTAG 5 cut(s) 9, 30, 428, 686, 905
GluI GCNGC 4 cut(s) 72, 97, 306, 750
GsaI CCCAGC 1 cut(s) 749
HaeIII GGCC 1 cut(s) 721
HapII CCGG 2 cut(s) 68, 863
HgaI GACGC 1 cut(s) 306
Hin1II CATG 4 cut(s) 85, 288, 414, 532
HincII GTYRAC 1 cut(s) 706
HindII GTYRAC 1 cut(s) 706
HinfI GANTC 3 cut(s) 356, 661, 777
HpaII CCGG 2 cut(s) 68, 863
HphI GGTGA 3 cut(s) 220, 253, 502
Hpy166II GTNNAC 2 cut(s) 595, 706
Hpy188I TCNGA 5 cut(s) 372, 423, 450, 616, 670
Hpy188III TCNNGA 6 cut(s) 9, 150, 405, 587, 640, 726
Hpy8I GTNNAC 2 cut(s) 595, 706
Hpy99I CGWCG 2 cut(s) 67, 269
HpyCH4III ACNGT 2 cut(s) 265, 924
HpyCH4V TGCA 6 cut(s) 96, 308, 337, 414, 438, 536
HpyF10VI GCNNNNNNNGC 2 cut(s) 314, 334
HpyF3I CTNAG 5 cut(s) 17, 498, 615, 669, 761
Hsp92II CATG 4 cut(s) 85, 288, 414, 532
KroI GCCGGC 1 cut(s) 67
KroNI GCCGGC 1 cut(s) 69
Kzo9I GATC 3 cut(s) 407, 508, 577
LmnI GCTCC 1 cut(s) 373
Lsp1109I GCAGC 3 cut(s) 83, 108, 292
LweI GCATC 3 cut(s) 83, 414, 441
MaeI CTAG 5 cut(s) 9, 30, 428, 686, 905
MaeIII GTNAC 1 cut(s) 892
MalI GATC 3 cut(s) 409, 510, 579
MboI GATC 3 cut(s) 407, 508, 577
MboII GAAGA 2 cut(s) 186, 191
MhlI GDGCHC 1 cut(s) 746
MlsI TGGCCA 1 cut(s) 721
MluCI AATT 6 cut(s) 256, 309, 332, 392, 466, 835
MluNI TGGCCA 1 cut(s) 721
MlyI GAGTC 1 cut(s) 350
MnlI CCTC 8 cut(s) 145, 196, 241, 284, 481, 486, 610, 927
Mox20I TGGCCA 1 cut(s) 721
Mph1103I ATGCAT 1 cut(s) 416
MroNI GCCGGC 1 cut(s) 67
MroXI GAANNNNTTC 2 cut(s) 58, 875
MscI TGGCCA 1 cut(s) 721
MseI TTAA 2 cut(s) 125, 801
Msp20I TGGCCA 1 cut(s) 721
MspA1I CMGCKG 1 cut(s) 749
MspI CCGG 2 cut(s) 68, 863
MspR9I CCNGG 1 cut(s) 112
MvaI CCWGG 1 cut(s) 112
MwoI GCNNNNNNNGC 2 cut(s) 314, 334
NaeI GCCGGC 1 cut(s) 69
NdeII GATC 3 cut(s) 407, 508, 577
NgoMIV GCCGGC 1 cut(s) 67
NheI GCTAGC 2 cut(s) 427, 685
NlaIII CATG 4 cut(s) 85, 288, 414, 532
NlaIV GGNNCC 1 cut(s) 369
NmuCI GTSAC 1 cut(s) 892
NsiI ATGCAT 1 cut(s) 416
PdiI GCCGGC 1 cut(s) 69
PdmI GAANNNNTTC 2 cut(s) 58, 875
PfeI GAWTC 2 cut(s) 661, 777
PkrI GCNGC 4 cut(s) 73, 98, 307, 751
PleI GAGTC 1 cut(s) 350
PpsI GAGTC 1 cut(s) 350
Psp6I CCWGG 1 cut(s) 110
PspFI CCCAGC 1 cut(s) 745
PspGI CCWGG 1 cut(s) 110
PspN4I GGNNCC 1 cut(s) 369
PstI CTGCAG 1 cut(s) 98
RsaI GTAC 1 cut(s) 915
RsaNI GTAC 1 cut(s) 914
SaqAI TTAA 2 cut(s) 125, 801
SatI GCNGC 4 cut(s) 72, 97, 306, 750
Sau3AI GATC 3 cut(s) 407, 508, 577
SchI GAGTC 1 cut(s) 350
ScrFI CCNGG 1 cut(s) 112
SduI GDGCHC 1 cut(s) 746
SfaNI GCATC 3 cut(s) 83, 414, 441
SfcI CTRYAG 1 cut(s) 94
SmlI CTYRAG 1 cut(s) 844
SmoI CTYRAG 1 cut(s) 844
Sse9I AATT 6 cut(s) 256, 309, 332, 392, 466, 835
SsiI CCGC 2 cut(s) 650, 749
SspI AATATT 2 cut(s) 129, 376
SspMI CTAG 5 cut(s) 9, 30, 428, 686, 905
StyD4I CCNGG 1 cut(s) 110
StyI CCWWGG 1 cut(s) 785
TaaI ACNGT 2 cut(s) 265, 924
TaqI TCGA 4 cut(s) 267, 330, 580, 954
TasI AATT 6 cut(s) 256, 309, 332, 392, 466, 835
TauI GCSGC 1 cut(s) 752
TfiI GAWTC 2 cut(s) 661, 777
Tru1I TTAA 2 cut(s) 125, 801
Tru9I TTAA 2 cut(s) 125, 801
TscAI CASTG 1 cut(s) 659
TseFI GTSAC 1 cut(s) 892
TseI GCWGC 3 cut(s) 71, 96, 305
Tsp45I GTSAC 1 cut(s) 892
TspDTI ATGAA 3 cut(s) 517, 674, 846
TspRI CASTG 1 cut(s) 659
XapI RAATTY 2 cut(s) 466, 835
XbaI TCTAGA 1 cut(s) 8
XmnI GAANNNNTTC 2 cut(s) 58, 875
XspI CTAG 5 cut(s) 9, 30, 428, 686, 905
Zsp2I ATGCAT 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.