26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0267101 |
| rosa_multiflora | Rmu_sc0002938.1_g000048 Rmu_ssc0000388.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00230360 |
| rosa_samantha | Rh4AG209500 Rh6BG151700 Rh6CG147200 Rh6CG147300 Rh6DG135800 |
| rosa_wichuraiana | Rw6G013070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 126 |
| AgsI | TTSAA | 1 cut(s) | 114 |
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| AoxI | GGCC | 1 cut(s) | 96 |
| AspA2I | CCTAGG | 1 cut(s) | 58 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| AvrII | CCTAGG | 1 cut(s) | 58 |
| BanII | GRGCYC | 1 cut(s) | 33 |
| BbsI | GAAGAC | 1 cut(s) | 56 |
| BbvCI | CCTCAGC | 1 cut(s) | 53 |
| BfaI | CTAG | 1 cut(s) | 59 |
| BlnI | CCTAGG | 1 cut(s) | 58 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BpiI | GAAGAC | 1 cut(s) | 56 |
| Bpu10I | CCTNAGC | 1 cut(s) | 53 |
| BsaJI | CCNNGG | 1 cut(s) | 58 |
| BseDI | CCNNGG | 1 cut(s) | 58 |
| BseMII | CTCAG | 2 cut(s) | 9, 67 |
| BshFI | GGCC | 1 cut(s) | 98 |
| BsnI | GGCC | 1 cut(s) | 98 |
| Bsp1286I | GDGCHC | 1 cut(s) | 33 |
| BspANI | GGCC | 1 cut(s) | 98 |
| BspCNI | CTCAG | 2 cut(s) | 10, 66 |
| BspHI | TCATGA | 1 cut(s) | 124 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BssECI | CCNNGG | 1 cut(s) | 58 |
| BssT1I | CCWWGG | 1 cut(s) | 58 |
| BstC8I | GCNNGC | 1 cut(s) | 40 |
| BstDEI | CTNAG | 2 cut(s) | 18, 53 |
| BstV2I | GAAGAC | 1 cut(s) | 56 |
| BsuRI | GGCC | 1 cut(s) | 98 |
| BtsI | GCAGTG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 1 cut(s) | 40 |
| CciI | TCATGA | 1 cut(s) | 124 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CviAII | CATG | 1 cut(s) | 125 |
| CviJI | RGCY | 4 cut(s) | 17, 31, 57, 98 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 31, 57, 98 |
| DdeI | CTNAG | 2 cut(s) | 18, 53 |
| Eco130I | CCWWGG | 1 cut(s) | 58 |
| Eco24I | GRGCYC | 1 cut(s) | 33 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco57I | CTGAAG | 1 cut(s) | 126 |
| EcoT14I | CCWWGG | 1 cut(s) | 58 |
| EcoT38I | GRGCYC | 1 cut(s) | 33 |
| ErhI | CCWWGG | 1 cut(s) | 58 |
| FaeI | CATG | 1 cut(s) | 128 |
| FaiI | YATR | 1 cut(s) | 126 |
| FatI | CATG | 1 cut(s) | 124 |
| FriOI | GRGCYC | 1 cut(s) | 33 |
| FspBI | CTAG | 1 cut(s) | 59 |
| HaeIII | GGCC | 1 cut(s) | 98 |
| Hin1II | CATG | 1 cut(s) | 128 |
| Hpy188I | TCNGA | 1 cut(s) | 138 |
| Hpy188III | TCNNGA | 1 cut(s) | 125 |
| HpyF3I | CTNAG | 2 cut(s) | 18, 53 |
| Hsp92II | CATG | 1 cut(s) | 128 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 1 cut(s) | 68 |
| MaeI | CTAG | 1 cut(s) | 59 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MhlI | GDGCHC | 1 cut(s) | 33 |
| MnlI | CCTC | 2 cut(s) | 62, 88 |
| NlaIII | CATG | 1 cut(s) | 128 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| PagI | TCATGA | 1 cut(s) | 124 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SduI | GDGCHC | 1 cut(s) | 33 |
| SetI | ASST | 2 cut(s) | 19, 64 |
| SgeI | CNNG | 6 cut(s) | 47, 51, 71, 86, 95, 137 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SspMI | CTAG | 1 cut(s) | 59 |
| StyI | CCWWGG | 1 cut(s) | 58 |
| TaqII | GACCGA | 1 cut(s) | 21 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TspDTI | ATGAA | 2 cut(s) | 113, 141 |
| TspRI | CASTG | 1 cut(s) | 106 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XmaJI | CCTAGG | 1 cut(s) | 58 |
| XspI | CTAG | 1 cut(s) | 59 |