Rh6CG409500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
59521983 .. 59522315
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG409500.1

Sequence Viewer

Length: 333 bp
ATGTTGCAGGCCAAGAGAGCAGCTGCTCCAAAGAGGTCTAAGAATGTCATTCCTCAGGTCATCACATCAAAAATGACATACAAAAAAAGAAAAACAGCTGAGGAAGCATCATCGTCACATGCTGTGCAACCAAATTCAAAAGCTAGAAGGCAACCAAGTTCAAAAGCTAGAAGGCCAGCAAGTTCAGAAGGTAGGAAGCAACCAAGTTCACAAAGAAGGAAGAAACCAAGTACACAAGCCACTCAACAGCCAAATTCACAAGTTATGGAGCAGTGCCAGACTTCACAGATTACTCAACAGAGCCAGACATCCTCTGAATGGGCAGGCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

110

Amino Acids

12.26

Weight (kDa)

11.5

Isoelectric Point (pI)

91.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 133, 253
AfaI GTAC 1 cut(s) 232
AfiI CCNNNNNNNGG 1 cut(s) 318
AgsI TTSAA 2 cut(s) 138, 162
AluBI AGCT 4 cut(s) 23, 98, 143, 167
AluI AGCT 4 cut(s) 23, 98, 143, 167
AoxI GGCC 2 cut(s) 9, 173
ApeKI GCWGC 2 cut(s) 20, 23
ApoI RAATTY 2 cut(s) 133, 253
AxyI CCTNAGG 1 cut(s) 54
BbvCI CCTCAGC 1 cut(s) 99
BbvI GCAGC 2 cut(s) 10, 32
BfaI CTAG 2 cut(s) 144, 168
BisI GCNGC 2 cut(s) 21, 24
BlsI GCNGC 2 cut(s) 22, 25
BmsI GCATC 1 cut(s) 116
Bpu10I CCTNAGC 1 cut(s) 99
Bsc4I CCNNNNNNNGG 1 cut(s) 318
Bse21I CCTNAGG 1 cut(s) 54
BseGI GGATG 1 cut(s) 308
BseLI CCNNNNNNNGG 1 cut(s) 318
BseMII CTCAG 2 cut(s) 68, 90
BseXI GCAGC 2 cut(s) 10, 32
BshFI GGCC 2 cut(s) 11, 175
BslI CCNNNNNNNGG 1 cut(s) 318
BsnI GGCC 2 cut(s) 11, 175
BspANI GGCC 2 cut(s) 11, 175
BspCNI CTCAG 2 cut(s) 67, 91
BstC8I GCNNGC 3 cut(s) 9, 177, 325
BstDEI CTNAG 3 cut(s) 39, 54, 99
BstF5I GGATG 1 cut(s) 308
BstMWI GCNNNNNNNGC 2 cut(s) 17, 104
BstNSI RCATGY 1 cut(s) 122
BstV1I GCAGC 2 cut(s) 10, 32
Bsu36I CCTNAGG 1 cut(s) 54
BsuRI GGCC 2 cut(s) 11, 175
BtsCI GGATG 1 cut(s) 308
BtsI GCAGTG 1 cut(s) 278
BtsIMutI CAGTG 1 cut(s) 278
Cac8I GCNNGC 3 cut(s) 9, 177, 325
Csp6I GTAC 1 cut(s) 231
CviAII CATG 1 cut(s) 119
CviQI GTAC 1 cut(s) 231
DdeI CTNAG 3 cut(s) 39, 54, 99
Eco81I CCTNAGG 1 cut(s) 54
FaeI CATG 1 cut(s) 122
FaiI YATR 3 cut(s) 79, 120, 266
FatI CATG 1 cut(s) 118
Fnu4HI GCNGC 2 cut(s) 21, 24
FokI GGATG 1 cut(s) 295
Fsp4HI GCNGC 2 cut(s) 21, 24
FspBI CTAG 2 cut(s) 144, 168
GluI GCNGC 2 cut(s) 21, 24
HaeIII GGCC 2 cut(s) 11, 175
Hin1II CATG 1 cut(s) 122
Hpy166II GTNNAC 2 cut(s) 209, 233
Hpy188I TCNGA 2 cut(s) 187, 316
Hpy8I GTNNAC 2 cut(s) 209, 233
HpyAV CCTTC 4 cut(s) 141, 165, 182, 210
HpyCH4V TGCA 2 cut(s) 7, 127
HpyF10VI GCNNNNNNNGC 2 cut(s) 17, 104
HpyF3I CTNAG 3 cut(s) 39, 54, 99
Hsp92II CATG 1 cut(s) 122
LmnI GCTCC 2 cut(s) 31, 268
LpnPI CCDG 5 cut(s) 41, 189, 290, 309, 317
Lsp1109I GCAGC 2 cut(s) 10, 32
LweI GCATC 1 cut(s) 116
MaeI CTAG 2 cut(s) 144, 168
MaeIII GTNAC 1 cut(s) 114
MboII GAAGA 1 cut(s) 232
MluCI AATT 2 cut(s) 133, 253
MnlI CCTC 4 cut(s) 27, 63, 94, 322
MseI TTAA 1 cut(s) 331
MspA1I CMGCKG 2 cut(s) 23, 98
MwoI GCNNNNNNNGC 2 cut(s) 17, 104
NlaIII CATG 1 cut(s) 122
NmuCI GTSAC 1 cut(s) 114
NspI RCATGY 1 cut(s) 122
PkrI GCNGC 2 cut(s) 22, 25
PvuII CAGCTG 2 cut(s) 23, 98
RsaI GTAC 1 cut(s) 232
RsaNI GTAC 1 cut(s) 231
SaqAI TTAA 1 cut(s) 331
SatI GCNGC 2 cut(s) 21, 24
SetI ASST 7 cut(s) 25, 38, 60, 100, 145, 169, 193
SfaNI GCATC 1 cut(s) 116
Sse9I AATT 2 cut(s) 133, 253
SspMI CTAG 2 cut(s) 144, 168
TasI AATT 2 cut(s) 133, 253
TatI WGTACW 1 cut(s) 230
Tru1I TTAA 1 cut(s) 331
Tru9I TTAA 1 cut(s) 331
TscAI CASTG 1 cut(s) 278
TseFI GTSAC 1 cut(s) 114
TseI GCWGC 2 cut(s) 20, 23
Tsp45I GTSAC 1 cut(s) 114
TspRI CASTG 1 cut(s) 278
XapI RAATTY 2 cut(s) 133, 253
XceI RCATGY 1 cut(s) 122
XspI CTAG 2 cut(s) 144, 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.