Rh7AG359200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
46103026 .. 46104068
1043 bp
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UTR
Exon/CDS
Intron
Rh7AG359200.1

Sequence Viewer

Length: 384 bp
ATGGCGAAATCAGCAGCAGCAGCAGCAGCAGCAGCAGGCAGGAAGAGGAAGAGTACTACAAGTGTTTCGGACTTGGAAATAACAGACGCAGCAAATCTGCTCATACAACTAAGCGGAAGCTCAGATACGATTTACTACGACGCAGAAGAAGCAAGCGTTGGTAAAACAACGCCAACTGCTCATCCCGATGATCATGATCAGGTGTCCTCTAATTCTGCCTTTAAATATAGAGTGTTTGAAGAGGAAGAGGAAGATGAAGATGAAGTGGGTTTCGGTAAGCCAATCGAGAAGAAACGATTTCGCTTGATTTCGGATCTGTACGAGCGGACGAAGCCTCTTAAAAATGGTGGTGTTGTAAATAGAAGGAAAAGGATGATGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

127

Amino Acids

14.01

Weight (kDa)

5.74

Isoelectric Point (pI)

38.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 325
AciI CCGC 2 cut(s) 114, 325
AclWI GGATC 1 cut(s) 321
AfaI GTAC 2 cut(s) 55, 320
AgsI TTSAA 1 cut(s) 239
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AluBI AGCT 1 cut(s) 120
AluI AGCT 1 cut(s) 120
AlwI GGATC 1 cut(s) 321
ApeKI GCWGC 8 cut(s) 14, 17, 20, 23, 26, 29, 32, 89
BarI GAAGNNNNNNTAC 2 cut(s) 109, 141
BbvI GCAGC 8 cut(s) 26, 29, 32, 35, 38, 41, 44, 101
BccI CCATC 1 cut(s) 370
BclI TGATCA 2 cut(s) 190, 196
BisI GCNGC 8 cut(s) 15, 18, 21, 24, 27, 30, 33, 90
BlsI GCNGC 8 cut(s) 16, 19, 22, 25, 28, 31, 34, 91
BmcAI AGTACT 1 cut(s) 55
BsaBI GATNNNNATC 1 cut(s) 195
Bse8I GATNNNNATC 1 cut(s) 195
BseGI GGATG 2 cut(s) 181, 378
BseJI GATNNNNATC 1 cut(s) 195
BseMII CTCAG 1 cut(s) 135
BseXI GCAGC 8 cut(s) 26, 29, 32, 35, 38, 41, 44, 101
Bsp143I GATC 3 cut(s) 190, 196, 313
BspACI CCGC 2 cut(s) 114, 325
BspCNI CTCAG 1 cut(s) 134
BspHI TCATGA 1 cut(s) 193
BspPI GGATC 1 cut(s) 321
BsrBI CCGCTC 1 cut(s) 325
BssMI GATC 3 cut(s) 190, 196, 313
Bst6I CTCTTC 4 cut(s) 38, 44, 234, 240
BstC8I GCNNGC 2 cut(s) 37, 154
BstDEI CTNAG 2 cut(s) 110, 121
BstF5I GGATG 2 cut(s) 181, 378
BstKTI GATC 3 cut(s) 193, 199, 316
BstMBI GATC 3 cut(s) 190, 196, 313
BstMWI GCNNNNNNNGC 8 cut(s) 11, 20, 23, 26, 29, 32, 149, 331
BstV1I GCAGC 8 cut(s) 26, 29, 32, 35, 38, 41, 44, 101
BstX2I RGATCY 1 cut(s) 313
BstYI RGATCY 1 cut(s) 313
BtsCI GGATG 2 cut(s) 181, 378
Cac8I GCNNGC 2 cut(s) 37, 154
CciI TCATGA 1 cut(s) 193
CseI GACGC 2 cut(s) 95, 149
Csp6I GTAC 2 cut(s) 54, 319
CviAII CATG 1 cut(s) 194
CviJI RGCY 3 cut(s) 120, 280, 334
CviKI_1 RGCY 3 cut(s) 120, 280, 334
CviQI GTAC 2 cut(s) 54, 319
DdeI CTNAG 2 cut(s) 110, 121
DpnI GATC 3 cut(s) 192, 198, 315
DpnII GATC 3 cut(s) 190, 196, 313
DraI TTTAAA 1 cut(s) 223
Eam1104I CTCTTC 4 cut(s) 38, 44, 234, 240
EarI CTCTTC 4 cut(s) 38, 44, 234, 240
FaeI CATG 1 cut(s) 197
FaiI YATR 3 cut(s) 104, 195, 228
FatI CATG 1 cut(s) 193
FbaI TGATCA 2 cut(s) 190, 196
Fnu4HI GCNGC 8 cut(s) 15, 18, 21, 24, 27, 30, 33, 90
FokI GGATG 1 cut(s) 168
Fsp4HI GCNGC 8 cut(s) 15, 18, 21, 24, 27, 30, 33, 90
GluI GCNGC 8 cut(s) 15, 18, 21, 24, 27, 30, 33, 90
HgaI GACGC 2 cut(s) 95, 149
Hin1II CATG 1 cut(s) 197
Hpy188I TCNGA 3 cut(s) 70, 124, 313
Hpy188III TCNNGA 3 cut(s) 185, 194, 286
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 1 cut(s) 357
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 20, 23, 26, 29, 32, 149, 331
HpyF3I CTNAG 2 cut(s) 110, 121
Hsp92II CATG 1 cut(s) 197
Ksp22I TGATCA 2 cut(s) 190, 196
Kzo9I GATC 3 cut(s) 190, 196, 313
LpnPI CCDG 3 cut(s) 21, 25, 185
Lsp1109I GCAGC 8 cut(s) 26, 29, 32, 35, 38, 41, 44, 101
MalI GATC 3 cut(s) 192, 198, 315
MbiI CCGCTC 1 cut(s) 325
MboI GATC 3 cut(s) 190, 196, 313
MboII GAAGA 8 cut(s) 55, 61, 158, 251, 257, 263, 269, 301
MflI RGATCY 1 cut(s) 313
MluCI AATT 1 cut(s) 211
MnlI CCTC 5 cut(s) 39, 217, 235, 241, 345
MseI TTAA 2 cut(s) 222, 339
MslI CAYNNNNRTG 1 cut(s) 186
MwoI GCNNNNNNNGC 8 cut(s) 11, 20, 23, 26, 29, 32, 149, 331
NdeII GATC 3 cut(s) 190, 196, 313
NlaIII CATG 1 cut(s) 197
PagI TCATGA 1 cut(s) 193
PkrI GCNGC 8 cut(s) 16, 19, 22, 25, 28, 31, 34, 91
PsuI RGATCY 1 cut(s) 313
RsaI GTAC 2 cut(s) 55, 320
RsaNI GTAC 2 cut(s) 54, 319
RseI CAYNNNNRTG 1 cut(s) 186
SaqAI TTAA 2 cut(s) 222, 339
SatI GCNGC 8 cut(s) 15, 18, 21, 24, 27, 30, 33, 90
Sau3AI GATC 3 cut(s) 190, 196, 313
ScaI AGTACT 1 cut(s) 55
SetI ASST 2 cut(s) 122, 204
SmiMI CAYNNNNRTG 1 cut(s) 186
Sse9I AATT 1 cut(s) 211
SsiI CCGC 2 cut(s) 114, 325
TaqI TCGA 1 cut(s) 285
TasI AATT 1 cut(s) 211
TatI WGTACW 1 cut(s) 53
Tru1I TTAA 2 cut(s) 222, 339
Tru9I TTAA 2 cut(s) 222, 339
TseI GCWGC 8 cut(s) 14, 17, 20, 23, 26, 29, 32, 89
TspDTI ATGAA 2 cut(s) 270, 276
ZrmI AGTACT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.