Rh7DG354400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
47247878 .. 47248237
360 bp
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UTR
Exon/CDS
Intron
Rh7DG354400.1

Sequence Viewer

Length: 360 bp
ATGGCGAAATCAGCAGCAGCAGCAGGCAGGAAGAGGAAGAGTTCAAGTGTTTCGGACTCGGAAATAATTGACGCAGCAAATCTGCTCATACAACTCAGCGGAAGCTCCGATATGATTTATTACGACGCTGAAGAAGAAAGCGTTGGTAAAACAACGCCAACTGCTCATCCCGATGATCATGATCAGGTGTCTTCTTCTCCCTTTAAATATAGAGTCTTTGAAGAGGAAGATGAAGATGAATTGGGTTTCGGTAAGCGAATTGAGAAGAAACGATTTCGCTTGATTTCGGATCTGTACGAGCAGACGAAGCCTCTTAAAAATGGTGGTGCTGTAAATAGAAGGAAAAGGAGGATGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

119

Amino Acids

13.38

Weight (kDa)

6.75

Isoelectric Point (pI)

63.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 99
AclWI GGATC 1 cut(s) 297
AcuI CTGAAG 1 cut(s) 150
AfaI GTAC 1 cut(s) 296
AgsI TTSAA 2 cut(s) 45, 221
AjuI GAANNNNNNNTTGG 2 cut(s) 126, 158
AluBI AGCT 1 cut(s) 105
AluI AGCT 1 cut(s) 105
AlwI GGATC 1 cut(s) 297
ApeKI GCWGC 4 cut(s) 14, 17, 20, 74
BbsI GAAGAC 1 cut(s) 183
BbvI GCAGC 4 cut(s) 26, 29, 32, 86
BccI CCATC 1 cut(s) 346
BclI TGATCA 2 cut(s) 175, 181
BisI GCNGC 4 cut(s) 15, 18, 21, 75
BlsI GCNGC 4 cut(s) 16, 19, 22, 76
BpiI GAAGAC 1 cut(s) 183
BsaBI GATNNNNATC 1 cut(s) 180
Bse8I GATNNNNATC 1 cut(s) 180
BseGI GGATG 2 cut(s) 166, 357
BseJI GATNNNNATC 1 cut(s) 180
BseMII CTCAG 1 cut(s) 109
BseXI GCAGC 4 cut(s) 26, 29, 32, 86
Bsp143I GATC 3 cut(s) 175, 181, 289
BspACI CCGC 1 cut(s) 99
BspCNI CTCAG 1 cut(s) 108
BspHI TCATGA 1 cut(s) 178
BspPI GGATC 1 cut(s) 297
BssMI GATC 3 cut(s) 175, 181, 289
Bst6I CTCTTC 3 cut(s) 26, 32, 216
BstC8I GCNNGC 1 cut(s) 25
BstDEI CTNAG 1 cut(s) 95
BstF5I GGATG 2 cut(s) 166, 357
BstKTI GATC 3 cut(s) 178, 184, 292
BstMBI GATC 3 cut(s) 175, 181, 289
BstMWI GCNNNNNNNGC 3 cut(s) 11, 20, 307
BstV1I GCAGC 4 cut(s) 26, 29, 32, 86
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 1 cut(s) 289
BstYI RGATCY 1 cut(s) 289
BtsCI GGATG 2 cut(s) 166, 357
Cac8I GCNNGC 1 cut(s) 25
CciI TCATGA 1 cut(s) 178
CseI GACGC 2 cut(s) 80, 134
Csp6I GTAC 1 cut(s) 295
CviAII CATG 1 cut(s) 179
CviJI RGCY 2 cut(s) 105, 310
CviKI_1 RGCY 2 cut(s) 105, 310
CviQI GTAC 1 cut(s) 295
DdeI CTNAG 1 cut(s) 95
DpnI GATC 3 cut(s) 177, 183, 291
DpnII GATC 3 cut(s) 175, 181, 289
DraI TTTAAA 1 cut(s) 205
Eam1104I CTCTTC 3 cut(s) 26, 32, 216
EarI CTCTTC 3 cut(s) 26, 32, 216
Eco57I CTGAAG 1 cut(s) 150
FaeI CATG 1 cut(s) 182
FaiI YATR 4 cut(s) 89, 113, 180, 210
FatI CATG 1 cut(s) 178
FbaI TGATCA 2 cut(s) 175, 181
Fnu4HI GCNGC 4 cut(s) 15, 18, 21, 75
FokI GGATG 1 cut(s) 153
Fsp4HI GCNGC 4 cut(s) 15, 18, 21, 75
GluI GCNGC 4 cut(s) 15, 18, 21, 75
HgaI GACGC 2 cut(s) 80, 134
Hin1II CATG 1 cut(s) 182
HinfI GANTC 2 cut(s) 56, 213
Hpy188I TCNGA 4 cut(s) 55, 61, 109, 289
Hpy188III TCNNGA 2 cut(s) 170, 179
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 333
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 20, 307
HpyF3I CTNAG 1 cut(s) 95
Hsp92II CATG 1 cut(s) 182
Ksp22I TGATCA 2 cut(s) 175, 181
Kzo9I GATC 3 cut(s) 175, 181, 289
LmnI GCTCC 1 cut(s) 110
LpnPI CCDG 3 cut(s) 9, 13, 170
Lsp1109I GCAGC 4 cut(s) 26, 29, 32, 86
MalI GATC 3 cut(s) 177, 183, 291
MboI GATC 3 cut(s) 175, 181, 289
MflI RGATCY 1 cut(s) 289
MluCI AATT 3 cut(s) 66, 239, 258
MlyI GAGTC 2 cut(s) 50, 222
MnlI CCTC 4 cut(s) 27, 217, 321, 342
MseI TTAA 2 cut(s) 204, 315
MslI CAYNNNNRTG 1 cut(s) 171
MspA1I CMGCKG 1 cut(s) 99
MwoI GCNNNNNNNGC 3 cut(s) 11, 20, 307
NdeII GATC 3 cut(s) 175, 181, 289
NlaIII CATG 1 cut(s) 182
PagI TCATGA 1 cut(s) 178
PkrI GCNGC 4 cut(s) 16, 19, 22, 76
PleI GAGTC 2 cut(s) 50, 221
PpsI GAGTC 2 cut(s) 50, 221
PsuI RGATCY 1 cut(s) 289
RsaI GTAC 1 cut(s) 296
RsaNI GTAC 1 cut(s) 295
RseI CAYNNNNRTG 1 cut(s) 171
SaqAI TTAA 2 cut(s) 204, 315
SatI GCNGC 4 cut(s) 15, 18, 21, 75
Sau3AI GATC 3 cut(s) 175, 181, 289
SchI GAGTC 2 cut(s) 50, 222
SetI ASST 2 cut(s) 107, 189
SgeI CNNG 9 cut(s) 36, 40, 57, 70, 182, 191, 197, 292, 310
SmiMI CAYNNNNRTG 1 cut(s) 171
Sse9I AATT 3 cut(s) 66, 239, 258
SsiI CCGC 1 cut(s) 99
TasI AATT 3 cut(s) 66, 239, 258
Tru1I TTAA 2 cut(s) 204, 315
Tru9I TTAA 2 cut(s) 204, 315
TseI GCWGC 4 cut(s) 14, 17, 20, 74
TspDTI ATGAA 2 cut(s) 246, 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.