Rh7BG152800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
11329168 .. 11333457
4290 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG152800.1

Sequence Viewer

Length: 1728 bp
ATGACTCAACCACTCTCTCTCGTGGTTTGTGGAAGACGACGATCCTCCTCTGATCTCATAATCCACGATGAAATAGAGGACAACAATCCAAGCATATCGCAGCTGGTTTCGGCGCTGCGGGACGCGTTTCAGGAGGCCGAGTTCGACAGAATCGAAGAGGCCTTGGTCGCCAGAGAGGCCCAGCTGAAGCGGCAGAACCAGATTATGAGGGAGAAGGTCGAGTTGGGCCTGCTGGACCGGCTCGGACTGGCCCAAGATCTCGAGGCTCTGAAGGAGAGGATGCCGCCGGAGAAGGTGAAGGAGGAGGTTTTGGACGAGGACAAAGAGGTAATTTCGCGGCTACGGAAGAAGAACAGTCGATTAGAGATGGAAAAATTGAGGCTTGAGCGTGAGTATGAGGCGTTGGAGAGCCGAATTTTGGGTTTAGAGGATGATACTACGAAATTGGTGAATGAAATGCTTCTGGGTTCAAGTAGAAATGAAGGAACGAGGATGAGAGACAATGGCAGTGTTGTAAATTTGGAGAAAGTGTTTGAGTGTTTGATTGAGGCTCAGGCAAACGGAAATCTGCAAATTTCAGCAGGGGAAGCAAAGCTAGAACGAGTGATTGAGAAACAGAGGGAGGAGTATGCAACACTTGAGAAAAGGCATAAGTTTGAGATGGAGAAAATGCTAAAAGTTGAGAATGAGTTTGCAGCACTCAAGAGAAAACACCAGCTTCAGCTGGAGGAAAAAGTCAAGGTTGAGAATGAGCTGAAGGCTTGCCGGGTAGAGATTGAGGGGCTCAAAATTGGGAATGAGGTGAAGTTGAAGGAAGTGCTAAAGGCAGTTGAGGAAAAACATAAGAGAGAGTATAAAGCACTTGAGCAAAAGCACCAATCTCACCTTCTGGAAGTTGAGAACGAGTTAAAGCACTGCAAAGCCGAGCTCCAGGGGTTAAAGGGGAAGCAAAGTATCTCAGATGAGAAGTATGAGAAGCTTCTGGAGGAGGTGAATAAGCACAGGAAACAGGAGGATGAAGTGGTCAATTTCGATCCCCAAAGACAGAGCAAGGAGGTGGAGAGTGAGCCTAATGTGGTATTGGAGAACGAAATCTCTCGTTTAGATAAGTTTAGGAATGCAAAGCATCTTGGTTCAAAAAACATGGATATGAGAAGCAAAAATAGTGGAATGCCAGATGGTAGTAGAAAACAGAAGTGTATTGTAACCCCTAACCATGTCATAAATGTAGAGAATGATTTTTGTGGTTCTGTGCCAGCGAGTACTTCCCCTCGAGGAAACAGTGTTCGAAATTCAGGTACTTCTAAATCTTCAAATGCAGACACCATTCTACTTAGCGATAGCGATGATGATTGTGCTCCTGCAAAACGGAAAAATTTTGGGCTCAAAAGAAAACGAGCTTCATCTCCAAATGCTAGTAAGAATAACAATGGTGGTCACAATTTCGAACGAGAGAGTTTCCCGACCTCTGAGAATAAGCAAAGCCGGATGCTGGGCCGCTGTGACTCTCTAGTTGGTGGCTATGGAATACAAAATAACCCACCGAGTCGTGACCAAGAGACCTTAAGACCATCTGAAGAAAAAGTAGGGGAAAAACAGAAGTCTCCTGCAAAGGTGAATGGCGAGTCTGATTCCAGTTCTGCATCTATGTTCAGTTCTGATGATTCTGATGATGACGATGACATCAATCTTGAATCAATGATGCTGTTCACAACAAACAGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

575

Amino Acids

65.42

Weight (kDa)

5.76

Isoelectric Point (pI)

54.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1272
AccII CGCG 2 cut(s) 125, 337
AciI CCGC 5 cut(s) 118, 190, 284, 337, 1498
AclWI GGATC 2 cut(s) 36, 1028
AcsI RAATTY 5 cut(s) 414, 517, 573, 1291, 1375
AcuI CTGAAG 5 cut(s) 206, 290, 704, 776, 1596
AfaI GTAC 2 cut(s) 1264, 1300
AfiI CCNNNNNNNGG 2 cut(s) 418, 1492
AflII CTTAAG 1 cut(s) 1564
AflIII ACRYGT 1 cut(s) 123
AgsI TTSAA 5 cut(s) 471, 811, 1137, 1314, 1694
AjnI CCWGG 1 cut(s) 930
AjuI GAANNNNNNNTTGG 4 cut(s) 206, 238, 870, 902
AloI GAACNNNNNNTCC 4 cut(s) 125, 157, 1269, 1301
AluBI AGCT 9 cut(s) 103, 184, 595, 718, 724, 754, 928, 979, 1400
AluI AGCT 9 cut(s) 103, 184, 595, 718, 724, 754, 928, 979, 1400
Alw21I GWGCWC 2 cut(s) 930, 1360
Alw26I GTCTC 3 cut(s) 492, 1553, 1608
AlwI GGATC 2 cut(s) 36, 1028
Ama87I CYCGRG 2 cut(s) 260, 1272
AoxI GGCC 6 cut(s) 135, 159, 177, 226, 249, 1495
ApeKI GCWGC 3 cut(s) 100, 115, 695
ApoI RAATTY 5 cut(s) 414, 517, 573, 1291, 1375
Asp700I GAANNNNTTC 1 cut(s) 459
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 5 cut(s) 178, 226, 235, 250, 1495
AsuC2I CCSGG 1 cut(s) 767
AsuHPI GGTGA 6 cut(s) 307, 460, 814, 875, 1003, 1627
AsuII TTCGAA 2 cut(s) 1288, 1446
AvaI CYCGRG 2 cut(s) 260, 1272
AvaII GGWCC 1 cut(s) 235
BanII GRGCYC 3 cut(s) 786, 930, 1386
BauI CACGAG 1 cut(s) 20
BbsI GAAGAC 1 cut(s) 40
Bbv12I GWGCWC 2 cut(s) 930, 1360
BbvI GCAGC 3 cut(s) 102, 112, 707
BccI CCATC 4 cut(s) 361, 655, 1172, 1579
BciT130I CCWGG 1 cut(s) 932
BcnI CCSGG 1 cut(s) 767
BcoDI GTCTC 3 cut(s) 492, 1553, 1608
BfaI CTAG 3 cut(s) 596, 1416, 1511
BfoI RGCGCY 1 cut(s) 116
BfrI CTTAAG 1 cut(s) 1564
BglI GCCNNNNNGGC 1 cut(s) 176
BglII AGATCT 1 cut(s) 256
BisI GCNGC 7 cut(s) 101, 116, 191, 284, 338, 696, 1498
BlsI GCNGC 7 cut(s) 102, 117, 192, 285, 339, 697, 1499
BmcAI AGTACT 1 cut(s) 1264
Bme1390I CCNGG 2 cut(s) 767, 932
Bme18I GGWCC 1 cut(s) 235
BmeT110I CYCGRG 2 cut(s) 260, 1272
BmgT120I GGNCC 5 cut(s) 178, 226, 235, 250, 1495
BmrFI CCNGG 2 cut(s) 767, 932
BmsI GCATC 5 cut(s) 270, 1135, 1479, 1652, 1692
BpiI GAAGAC 1 cut(s) 40
BpmI CTGGAG 3 cut(s) 746, 914, 1004
Bpu10I CCTNAGC 1 cut(s) 552
Bpu14I TTCGAA 2 cut(s) 1288, 1446
BpuEI CTTGAG 4 cut(s) 404, 659, 686, 884
BpuMI CCSGG 1 cut(s) 767
BsaI GGTCTC 1 cut(s) 1553
BsaJI CCNNGG 2 cut(s) 162, 931
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 515, 545
Bsc4I CCNNNNNNNGG 2 cut(s) 418, 1492
Bse118I RCCGGY 1 cut(s) 237
Bse1I ACTGG 2 cut(s) 252, 1635
BseBI CCWGG 1 cut(s) 932
BseDI CCNNGG 2 cut(s) 162, 931
BseGI GGATG 5 cut(s) 285, 436, 498, 1021, 1494
BseLI CCNNNNNNNGG 2 cut(s) 418, 1492
BseMII CTCAG 3 cut(s) 566, 972, 1461
BseNI ACTGG 2 cut(s) 252, 1635
BseRI GAGGAG 4 cut(s) 37, 317, 638, 1001
BseXI GCAGC 3 cut(s) 102, 112, 707
BseYI CCCAGC 2 cut(s) 180, 1492
Bsh1236I CGCG 2 cut(s) 125, 337
BshFI GGCC 6 cut(s) 137, 161, 179, 228, 251, 1497
BsiHKAI GWGCWC 2 cut(s) 930, 1360
BsiHKCI CYCGRG 2 cut(s) 260, 1272
BsiSI CCGG 4 cut(s) 238, 287, 766, 1486
BslFI GGGAC 1 cut(s) 134
BslI CCNNNNNNNGG 2 cut(s) 418, 1492
BsmAI GTCTC 3 cut(s) 492, 1553, 1608
BsmFI GGGAC 1 cut(s) 134
BsmI GAATGC 2 cut(s) 1123, 1176
BsnI GGCC 6 cut(s) 137, 161, 179, 228, 251, 1497
Bso31I GGTCTC 1 cut(s) 1553
BsoBI CYCGRG 2 cut(s) 260, 1272
Bsp119I TTCGAA 2 cut(s) 1288, 1446
Bsp1286I GDGCHC 4 cut(s) 786, 930, 1360, 1386
Bsp143I GATC 5 cut(s) 41, 52, 256, 1033, 1721
BspACI CCGC 5 cut(s) 118, 190, 284, 337, 1498
BspANI GGCC 6 cut(s) 137, 161, 179, 228, 251, 1497
BspCNI CTCAG 3 cut(s) 565, 971, 1462
BspFNI CGCG 2 cut(s) 125, 337
BspHI TCATGA 1 cut(s) 1724
BspPI GGATC 2 cut(s) 36, 1028
BspT104I TTCGAA 2 cut(s) 1288, 1446
BspTI CTTAAG 1 cut(s) 1564
BspTNI GGTCTC 1 cut(s) 1553
BsrFI RCCGGY 1 cut(s) 237
BsrI ACTGG 2 cut(s) 252, 1635
BssAI RCCGGY 1 cut(s) 237
BssECI CCNNGG 2 cut(s) 162, 931
BssMI GATC 5 cut(s) 41, 52, 256, 1033, 1721
BssSI CACGAG 1 cut(s) 20
BssT1I CCWWGG 1 cut(s) 162
Bst2BI CACGAG 1 cut(s) 20
Bst2UI CCWGG 1 cut(s) 932
Bst4CI ACNGT 2 cut(s) 356, 1283
Bst6I CTCTTC 1 cut(s) 150
BstAFI CTTAAG 1 cut(s) 1564
BstBI TTCGAA 2 cut(s) 1288, 1446
BstC8I GCNNGC 3 cut(s) 230, 763, 1257
BstDEI CTNAG 4 cut(s) 552, 958, 1334, 1470
BstF5I GGATG 5 cut(s) 285, 436, 498, 1021, 1494
BstFNI CGCG 2 cut(s) 125, 337
BstH2I RGCGCY 1 cut(s) 116
BstHHI GCGC 1 cut(s) 115
BstKTI GATC 5 cut(s) 44, 55, 259, 1036, 1724
BstMAI GTCTC 3 cut(s) 492, 1553, 1608
BstMBI GATC 5 cut(s) 41, 52, 256, 1033, 1721
BstMWI GCNNNNNNNGC 5 cut(s) 167, 176, 190, 238, 587
BstNI CCWGG 1 cut(s) 932
BstSCI CCNGG 2 cut(s) 765, 930
BstUI CGCG 2 cut(s) 125, 337
BstV1I GCAGC 3 cut(s) 102, 112, 707
BstV2I GAAGAC 1 cut(s) 40
BstX2I RGATCY 1 cut(s) 256
BstYI RGATCY 1 cut(s) 256
BsuRI GGCC 6 cut(s) 137, 161, 179, 228, 251, 1497
BtgZI GCGATG 1 cut(s) 1359
BtsCI GGATG 5 cut(s) 285, 436, 498, 1021, 1494
BtsI GCAGTG 2 cut(s) 514, 913
BtsIMutI CAGTG 3 cut(s) 514, 913, 1288
Cac8I GCNNGC 3 cut(s) 230, 763, 1257
CciI TCATGA 1 cut(s) 1724
CfoI GCGC 1 cut(s) 115
Cfr10I RCCGGY 1 cut(s) 237
Cfr13I GGNCC 5 cut(s) 178, 226, 235, 250, 1495
CseI GACGC 1 cut(s) 131
Csp6I GTAC 2 cut(s) 1263, 1299
CspCI CAANNNNNGTGG 2 cut(s) 1147, 1182
CviAII CATG 3 cut(s) 1144, 1217, 1725
CviQI GTAC 2 cut(s) 1263, 1299
DdeI CTNAG 4 cut(s) 552, 958, 1334, 1470
DpnI GATC 5 cut(s) 43, 54, 258, 1035, 1723
DpnII GATC 5 cut(s) 41, 52, 256, 1033, 1721
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Ecl136II GAGCTC 1 cut(s) 928
Eco130I CCWWGG 1 cut(s) 162
Eco147I AGGCCT 1 cut(s) 161
Eco24I GRGCYC 3 cut(s) 786, 930, 1386
Eco31I GGTCTC 1 cut(s) 1553
Eco47I GGWCC 1 cut(s) 235
Eco53kI GAGCTC 1 cut(s) 928
Eco57I CTGAAG 5 cut(s) 206, 290, 704, 776, 1596
Eco88I CYCGRG 2 cut(s) 260, 1272
EcoICRI GAGCTC 1 cut(s) 928
EcoRII CCWGG 1 cut(s) 930
EcoT14I CCWWGG 1 cut(s) 162
EcoT38I GRGCYC 3 cut(s) 786, 930, 1386
ErhI CCWWGG 1 cut(s) 162
FaeI CATG 3 cut(s) 1147, 1220, 1728
FaqI GGGAC 1 cut(s) 134
FatI CATG 3 cut(s) 1143, 1216, 1724
FauI CCCGC 1 cut(s) 111
Fnu4HI GCNGC 7 cut(s) 101, 116, 191, 284, 338, 696, 1498
FokI GGATG 5 cut(s) 292, 443, 505, 1028, 1501
FriOI GRGCYC 3 cut(s) 786, 930, 1386
Fsp4HI GCNGC 7 cut(s) 101, 116, 191, 284, 338, 696, 1498
FspBI CTAG 3 cut(s) 596, 1416, 1511
GlaI GCGC 1 cut(s) 114
GluI GCNGC 7 cut(s) 101, 116, 191, 284, 338, 696, 1498
GsaI CCCAGC 2 cut(s) 184, 1496
GsuI CTGGAG 3 cut(s) 746, 914, 1004
HaeII RGCGCY 1 cut(s) 116
HaeIII GGCC 6 cut(s) 137, 161, 179, 228, 251, 1497
HapII CCGG 4 cut(s) 238, 287, 766, 1486
HgaI GACGC 1 cut(s) 131
HhaI GCGC 1 cut(s) 115
Hin1II CATG 3 cut(s) 1147, 1220, 1728
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HindIII AAGCTT 1 cut(s) 977
HinfI GANTC 8 cut(s) 4, 150, 1505, 1546, 1625, 1631, 1664, 1694
HpaII CCGG 4 cut(s) 238, 287, 766, 1486
HphI GGTGA 6 cut(s) 307, 460, 814, 875, 1003, 1627
Hpy166II GTNNAC 1 cut(s) 1710
Hpy188I TCNGA 9 cut(s) 52, 245, 270, 961, 1471, 1576, 1630, 1660, 1669
Hpy188III TCNNGA 9 cut(s) 131, 260, 703, 890, 983, 1462, 1550, 1691, 1725
Hpy8I GTNNAC 1 cut(s) 1710
Hpy99I CGWCG 1 cut(s) 42
HpyAV CCTTC 8 cut(s) 208, 265, 286, 292, 476, 751, 805, 896
HpyCH4III ACNGT 2 cut(s) 356, 1283
HpyCH4V TGCA 9 cut(s) 571, 632, 695, 918, 1121, 1319, 1364, 1610, 1643
HpyF10VI GCNNNNNNNGC 5 cut(s) 167, 176, 190, 238, 587
HpyF3I CTNAG 4 cut(s) 552, 958, 1334, 1470
Hsp92II CATG 3 cut(s) 1147, 1220, 1728
HspAI GCGC 1 cut(s) 113
Kzo9I GATC 5 cut(s) 41, 52, 256, 1033, 1721
LmnI GCTCC 2 cut(s) 933, 1363
Lsp1109I GCAGC 3 cut(s) 102, 112, 707
LweI GCATC 5 cut(s) 270, 1135, 1479, 1652, 1692
MaeI CTAG 3 cut(s) 596, 1416, 1511
MaeIII GTNAC 4 cut(s) 1204, 1436, 1502, 1550
MalI GATC 5 cut(s) 43, 54, 258, 1035, 1723
MboI GATC 5 cut(s) 41, 52, 256, 1033, 1721
MboII GAAGA 6 cut(s) 45, 167, 358, 361, 1302, 1589
MflI RGATCY 1 cut(s) 256
MhlI GDGCHC 4 cut(s) 786, 930, 1360, 1386
MluI ACGCGT 1 cut(s) 123
MlyI GAGTC 3 cut(s) 1499, 1555, 1634
MmeI TCCRAC 1 cut(s) 384
MroXI GAANNNNTTC 1 cut(s) 459
MseI TTAA 3 cut(s) 908, 938, 1565
MslI CAYNNNNRTG 1 cut(s) 1148
MspA1I CMGCKG 4 cut(s) 103, 184, 724, 1500
MspCI CTTAAG 1 cut(s) 1564
MspI CCGG 4 cut(s) 238, 287, 766, 1486
MspR9I CCNGG 2 cut(s) 767, 932
Mva1269I GAATGC 2 cut(s) 1123, 1176
MvaI CCWGG 1 cut(s) 932
MvnI CGCG 2 cut(s) 125, 337
MwoI GCNNNNNNNGC 5 cut(s) 167, 176, 190, 238, 587
NciI CCSGG 1 cut(s) 767
NdeII GATC 5 cut(s) 41, 52, 256, 1033, 1721
NlaIII CATG 3 cut(s) 1147, 1220, 1728
NmeAIII GCCGAG 2 cut(s) 163, 949
NmuCI GTSAC 3 cut(s) 1436, 1502, 1550
NspV TTCGAA 2 cut(s) 1288, 1446
PaeR7I CTCGAG 2 cut(s) 260, 1272
PagI TCATGA 1 cut(s) 1724
PceI AGGCCT 1 cut(s) 161
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 2 cut(s) 1123, 1176
PdmI GAANNNNTTC 1 cut(s) 459
PfeI GAWTC 4 cut(s) 150, 1631, 1664, 1694
PkrI GCNGC 7 cut(s) 102, 117, 192, 285, 339, 697, 1499
PleI GAGTC 3 cut(s) 1499, 1554, 1633
PpsI GAGTC 3 cut(s) 1499, 1554, 1633
Psp124BI GAGCTC 1 cut(s) 930
Psp6I CCWGG 1 cut(s) 930
PspFI CCCAGC 2 cut(s) 180, 1492
PspGI CCWGG 1 cut(s) 930
PspPI GGNCC 5 cut(s) 178, 226, 235, 250, 1495
PspXI VCTCGAGB 1 cut(s) 1272
PsuI RGATCY 1 cut(s) 256
PvuII CAGCTG 3 cut(s) 103, 184, 724
RsaI GTAC 2 cut(s) 1264, 1300
RsaNI GTAC 2 cut(s) 1263, 1299
RseI CAYNNNNRTG 1 cut(s) 1148
SacI GAGCTC 1 cut(s) 930
SaqAI TTAA 3 cut(s) 908, 938, 1565
SatI GCNGC 7 cut(s) 101, 116, 191, 284, 338, 696, 1498
Sau3AI GATC 5 cut(s) 41, 52, 256, 1033, 1721
Sau96I GGNCC 5 cut(s) 178, 226, 235, 250, 1495
ScaI AGTACT 1 cut(s) 1264
SchI GAGTC 3 cut(s) 1499, 1555, 1634
ScrFI CCNGG 2 cut(s) 767, 932
SduI GDGCHC 4 cut(s) 786, 930, 1360, 1386
SfaNI GCATC 5 cut(s) 270, 1135, 1479, 1652, 1692
Sfr274I CTCGAG 2 cut(s) 260, 1272
SfuI TTCGAA 2 cut(s) 1288, 1446
SinI GGWCC 1 cut(s) 235
SlaI CTCGAG 2 cut(s) 260, 1272
SmiMI CAYNNNNRTG 1 cut(s) 1148
SmlI CTYRAG 7 cut(s) 260, 383, 638, 701, 863, 1272, 1564
SmoI CTYRAG 7 cut(s) 260, 383, 638, 701, 863, 1272, 1564
SseBI AGGCCT 1 cut(s) 161
SsiI CCGC 5 cut(s) 118, 190, 284, 337, 1498
SspMI CTAG 3 cut(s) 596, 1416, 1511
SstI GAGCTC 1 cut(s) 930
StuI AGGCCT 1 cut(s) 161
StyD4I CCNGG 2 cut(s) 765, 930
StyI CCWWGG 1 cut(s) 162
TaaI ACNGT 2 cut(s) 356, 1283
TaqI TCGA 9 cut(s) 144, 153, 219, 261, 358, 1032, 1273, 1288, 1446
TatI WGTACW 1 cut(s) 1262
TauI GCSGC 4 cut(s) 193, 286, 340, 1500
TfiI GAWTC 4 cut(s) 150, 1631, 1664, 1694
Tru1I TTAA 3 cut(s) 908, 938, 1565
Tru9I TTAA 3 cut(s) 908, 938, 1565
TscAI CASTG 3 cut(s) 514, 920, 1288
TseFI GTSAC 3 cut(s) 1436, 1502, 1550
TseI GCWGC 3 cut(s) 100, 115, 695
Tsp45I GTSAC 3 cut(s) 1436, 1502, 1550
TspDTI ATGAA 5 cut(s) 84, 468, 495, 1032, 1392
TspGWI ACGGA 3 cut(s) 358, 576, 1384
TspRI CASTG 3 cut(s) 514, 920, 1288
Vha464I CTTAAG 1 cut(s) 1564
VpaK11BI GGWCC 1 cut(s) 235
XapI RAATTY 5 cut(s) 414, 517, 573, 1291, 1375
XhoI CTCGAG 2 cut(s) 260, 1272
XmnI GAANNNNTTC 1 cut(s) 459
XspI CTAG 3 cut(s) 596, 1416, 1511
ZrmI AGTACT 1 cut(s) 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.