Rh7BG441100

protein ubiquitination

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0013581
Physical Location & Seq
Reverse (-)
50891755 .. 50907459
15705 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG441100.1

Sequence Viewer

Length: 2257 bp
ATGGCAAGTACTGCAGGTGTCTCCAGTTCACTTATTCTGGAAGTTCTCAACCGTAATAACTATAAAAAGTGGAGATTGCGGGTAAAAACTTATTTGTTGGCTGAAGATCTATGGGAGGTTGTCGAAGCAATAACAGAAACTGCAAATCTAGAGGATGATGAAGCTGAATATAAGTCTTGGAGAAAAAAGAATGCCAAGGCTTTATACGCAATCCAAAATTCATGCGGGCCGGAGATGTTTCATTTTATAAGCGAAAATGAAACGGCCAAAAGTGCTTGGGAGACTTTAGCAAAAGTTTCGAGGTTAAGAGGGCATGTTGAGAACAGTGCCGAAAACTTCGAGCCCTACATACCGTTCACCAAATTTGTGAGCAAAGGTGATTGGGATAAGGCAAAGGAGTGCCTTAAACTGAAAGAACTAGATCTCCACAGCGCCGTAAGAGCAATAGATCCAAGAGACAAGTGTGGAGACACAGCCATTCACGTAGCAGCCATGCAAGGGCACGTGAATATCGTGACAGATTTGGTGCTGTTGATGACCCAAGAAGATTTGAAAATAAAAAACGCTAAAGGTTCCACAGCTCTTCATGTAGCAGCATTTTATGGGCAGCTGAATTTTGTGAAAGAGTTGGTGCTGTTGATGGGAGATGAAATAGACAGGAATGGTGACACAGCTCTTCACTATGCAGTCCAGAGGGGGAAGGTGGACATTGTCAAAGAGTTGGTGCTGTTTATGAGACAAAAAGACTTGAAACTAAAAAACAACAATGGTTGCACAGCTCTTCACCTAGCTGTCAAGATGGGAAATGTGCGAATGGTGACAGATTTAGCGGCGTTGGTGGGAGAAGTGAGAGGCCCTGATGGTGACACTGGTCTTCATATGGCAGTGAAGATGGGGGCTGCAAAAATTGTGAAAGAGCTGGTGGGGTTGATGAGAAGGGAAGATTTGGCAATAAAAAATGATGAAGGTTACACAGCTTTTCACCTAGCAGTAAAGAAGGGTGATGTGCCTATTGTGAAAGAGTTCACGACAAGCGAAAAAGACCGCGACTTTGATAGCTATATTCAGTTCACCAAATTTGTGGCAAATGGTGATTGGGATAATGCAAAGGAGTGCCTTACAAAACTAGATGATCCTTGTGACGCAATAGCGAGAGTGGATCCAAGAGACGGATATGGACACACTGCTCTTCATGTAGCAGCTAGAGAAGGGCATGTGCATATTGTGACAGAATCGATATCGTTGCTGAAGGTGAGACAAGAAAATTTGCAACTGAAAATCGTAGAAGATTTTGCAACTTTTGGTTCTGGTATAAATTTAGGTATCACTGAAGAAGTTCTCATGGAAAACGCCAAATACATGGTTGAACAGTACGAGAAAACACTTACCAGTATTTTAGATGTACAAAATGCACAAGGTTCCACAGCCCTTCAAATAGCAGTATCCAAGGGTAATTTAGATGTTGTGAAAGAGTTGGTGCCATTAATGAGAAAAGAGAGTTTCGAAATAAAAGATGTTGAAGGATTCACAGCTCTTCACAATGCAGTCGAGAAGGGTTATATTGATATTGTGAAAGAGTTGGTGCCAATGATGAGACAAGAAGGTTTGGAATTAAAAACAGCCAAAAATGGCTACAATGCACTTCACCATGCCGTCATGATGGGGCATATGAATATTGCGAAAGAGGTGATGCCATTTATGAGAAGAGAAGCTTTGGAAGAAGAAGACGGTGAAGGTTATACAGCTTTAGGTTGTGCGTTAGATGTACGCAATGATGAAGACGTGATGGAAATAGCCAAGTACATGGCTGAAAACAACAATAAAGTATTTGGCATCGGAGTGCCTCCTACTAATTGGATTCCAGTTGTCAGGACTATCGATAAGAGGAGATGGGATTTGTGTCGCTATCTCTATCCTCTTACTCCGCTTGAATATCTAATGCCCGAGCACGGGAATGATGGCGCACAGTTGATTCACAATTGGTTAAGAGCGAAGGAGCTTGGTATGGCTTTGGACTTACTTCGGCGTTGCCCTAGATTGGCCATCAGTCCAAGCGGCTCTGGATGTCCCCCCATAATGGAATTGGCTGGCATGCATTCTTCATTCTTAAGTGGAACCCAACTTGGATTTTGGCAATATTTGATCTATAATCGTTTACGCATTGAACCTGCTGATGTGAACACTCATTCTGATACTTGCATCAATATTTCAAAACAAGAGAATGATCGAGACAATCAAATGGATCTCATTCGCTCAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

752

Amino Acids

84.53

Weight (kDa)

5.73

Isoelectric Point (pI)

32.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 16 - 42 2.1e-09 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 29 - 98 6.9e-10 gag-polypeptide of LTR copia-type
Ank_2 PF12796 149 - 211 2.4e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 215 - 276 2.6e-11 Ankyrin repeats (3 copies)
Ank_5 PF13857 220 - 264 7.1e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 286 - 343 1.2e-06 Ankyrin repeats (3 copies)
Ank_5 PF13857 287 - 330 7.5e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 466 - 528 1.4e-11 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 248
AarI CACCTGC 1 cut(s) 5
Acc36I ACCTGC 2 cut(s) 5, 2176
AccB1I GGYRCC 2 cut(s) 1477, 1582
AccII CGCG 1 cut(s) 1047
AciI CCGC 6 cut(s) 79, 225, 830, 1045, 1925, 2055
AclWI GGATC 5 cut(s) 443, 1127, 1154, 1167, 2250
AcoI YGGCCR 2 cut(s) 264, 2040
AcsI RAATTY 6 cut(s) 217, 362, 613, 1076, 1264, 1315
AcuI CTGAAG 3 cut(s) 123, 1268, 1350
AcvI CACGTG 1 cut(s) 505
AfaI GTAC 5 cut(s) 10, 1373, 1404, 1767, 1802
AfiI CCNNNNNNNGG 6 cut(s) 498, 1169, 1949, 1950, 2038, 2077
AflII CTTAAG 1 cut(s) 2107
AgsI TTSAA 8 cut(s) 553, 751, 1367, 1433, 1520, 1931, 2165, 2211
AjiI CACGTC 1 cut(s) 1783
AloI GAACNNNNNNTCC 2 cut(s) 408, 440
Alw21I GWGCWC 1 cut(s) 1950
Alw26I GTCTC 9 cut(s) 25, 275, 450, 462, 730, 1161, 1249, 1588, 2223
AlwI GGATC 5 cut(s) 443, 1127, 1154, 1167, 2250
AlwNI CAGNNNCTG 1 cut(s) 140
Ama87I CYCGRG 1 cut(s) 1943
AoxI GGCC 4 cut(s) 227, 264, 853, 2040
ApeKI GCWGC 5 cut(s) 488, 593, 607, 899, 1199
ApoI RAATTY 6 cut(s) 217, 362, 613, 1076, 1264, 1315
ArsI GACNNNNNNTTYG 2 cut(s) 1034, 1066
AseI ATTAAT 1 cut(s) 1484
Asp700I GAANNNNTTC 2 cut(s) 1022, 1335
AspLEI GCGC 2 cut(s) 434, 1964
AspS9I GGNCC 2 cut(s) 227, 854
AsuII TTCGAA 1 cut(s) 1503
AvaI CYCGRG 1 cut(s) 1943
BaeGI GKGCMC 1 cut(s) 504
BalI TGGCCA 1 cut(s) 2042
BamHI GGATCC 1 cut(s) 1159
BanI GGYRCC 2 cut(s) 1477, 1582
BanII GRGCYC 1 cut(s) 345
BbrPI CACGTG 1 cut(s) 505
BbsI GAAGAC 3 cut(s) 866, 1731, 1785
Bbv12I GWGCWC 1 cut(s) 1950
BbvI GCAGC 5 cut(s) 500, 605, 619, 886, 1211
BccI CCATC 9 cut(s) 634, 793, 854, 886, 1654, 1780, 1884, 1952, 2051
BceAI ACGGC 3 cut(s) 279, 419, 1637
BcgI CGANNNNNNTGC 4 cut(s) 279, 313, 1225, 1259
BciVI GTATCC 1 cut(s) 1453
BcoDI GTCTC 9 cut(s) 25, 275, 450, 462, 730, 1161, 1249, 1588, 2223
BfaI CTAG 7 cut(s) 149, 419, 788, 986, 1127, 1203, 2034
BfmI CTRYAG 1 cut(s) 12
BfoI RGCGCY 1 cut(s) 435
BfrI CTTAAG 1 cut(s) 2107
BfuAI ACCTGC 2 cut(s) 5, 2176
BfuI GTATCC 1 cut(s) 1453
BglII AGATCT 2 cut(s) 106, 421
BisI GCNGC 7 cut(s) 489, 594, 608, 831, 900, 1200, 2056
BlsI GCNGC 7 cut(s) 490, 595, 609, 832, 901, 1201, 2057
BmcAI AGTACT 1 cut(s) 10
BmeT110I CYCGRG 1 cut(s) 1943
BmgBI CACGTC 1 cut(s) 1783
BmgT120I GGNCC 2 cut(s) 227, 854
BmiI GGNNCC 6 cut(s) 574, 1161, 1420, 1479, 1584, 2116
BmsI GCATC 3 cut(s) 1680, 1842, 2208
BoxI GACNNNNGTC 1 cut(s) 870
BpiI GAAGAC 3 cut(s) 866, 1731, 1785
BpmI CTGGAG 1 cut(s) 7
Bpu14I TTCGAA 1 cut(s) 1503
Bsa29I ATCGAT 2 cut(s) 1235, 1878
BsaAI YACGTR 2 cut(s) 484, 505
BsaJI CCNNGG 2 cut(s) 195, 1446
BsaXI ACNNNNNCTCC 2 cut(s) 408, 438
Bsc4I CCNNNNNNNGG 6 cut(s) 498, 1169, 1949, 1950, 2038, 2077
Bse1I ACTGG 4 cut(s) 24, 874, 1389, 1862
Bse3DI GCAATG 1 cut(s) 1777
BseCI ATCGAT 2 cut(s) 1235, 1878
BseDI CCNNGG 2 cut(s) 195, 1446
BseGI GGATG 2 cut(s) 160, 2069
BseLI CCNNNNNNNGG 6 cut(s) 498, 1169, 1949, 1950, 2038, 2077
BseMI GCAATG 1 cut(s) 1777
BseNI ACTGG 4 cut(s) 24, 874, 1389, 1862
BseRI GAGGAG 1 cut(s) 1900
BseSI GKGCMC 1 cut(s) 504
BseXI GCAGC 5 cut(s) 500, 605, 619, 886, 1211
Bsh1236I CGCG 1 cut(s) 1047
BshFI GGCC 4 cut(s) 229, 266, 855, 2042
BshNI GGYRCC 2 cut(s) 1477, 1582
BshVI ATCGAT 2 cut(s) 1235, 1878
BsiHKAI GWGCWC 1 cut(s) 1950
BsiHKCI CYCGRG 1 cut(s) 1943
BsiSI CCGG 1 cut(s) 230
BslFI GGGAC 1 cut(s) 2052
BslI CCNNNNNNNGG 6 cut(s) 498, 1169, 1949, 1950, 2038, 2077
BsmAI GTCTC 9 cut(s) 25, 275, 450, 462, 730, 1161, 1249, 1588, 2223
BsmBI CGTCTC 1 cut(s) 1161
BsmFI GGGAC 1 cut(s) 2052
BsmI GAATGC 2 cut(s) 196, 2095
BsnI GGCC 4 cut(s) 229, 266, 855, 2042
BsoBI CYCGRG 1 cut(s) 1943
Bsp119I TTCGAA 1 cut(s) 1503
Bsp1286I GDGCHC 3 cut(s) 345, 504, 1950
Bsp1407I TGTACA 1 cut(s) 1402
Bsp143I GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
BspACI CCGC 6 cut(s) 79, 225, 830, 1045, 1925, 2055
BspANI GGCC 4 cut(s) 229, 266, 855, 2042
BspDI ATCGAT 2 cut(s) 1235, 1878
BspFNI CGCG 1 cut(s) 1047
BspHI TCATGA 1 cut(s) 1656
BspLI GGNNCC 6 cut(s) 574, 1161, 1420, 1479, 1584, 2116
BspMAI CTGCAG 1 cut(s) 16
BspMI ACCTGC 2 cut(s) 5, 2176
BspPI GGATC 5 cut(s) 443, 1127, 1154, 1167, 2250
BspQI GCTCTTC 5 cut(s) 588, 681, 786, 1194, 1539
BspT104I TTCGAA 1 cut(s) 1503
BspT107I GGYRCC 2 cut(s) 1477, 1582
BspTI CTTAAG 1 cut(s) 2107
BsrDI GCAATG 1 cut(s) 1777
BsrGI TGTACA 1 cut(s) 1402
BsrI ACTGG 4 cut(s) 24, 874, 1389, 1862
BssECI CCNNGG 2 cut(s) 195, 1446
BssMI GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
BssT1I CCWWGG 2 cut(s) 195, 1446
Bst4CI ACNGT 6 cut(s) 53, 326, 354, 1371, 1730, 1968
Bst6I CTCTTC 6 cut(s) 588, 681, 786, 1194, 1539, 1699
BstAFI CTTAAG 1 cut(s) 2107
BstAPI GCANNNNNTGC 1 cut(s) 11
BstAUI TGTACA 1 cut(s) 1402
BstBAI YACGTR 2 cut(s) 484, 505
BstBI TTCGAA 1 cut(s) 1503
BstC8I GCNNGC 3 cut(s) 227, 2089, 2093
BstDEI CTNAG 1 cut(s) 2254
BstF5I GGATG 2 cut(s) 160, 2069
BstFNI CGCG 1 cut(s) 1047
BstH2I RGCGCY 1 cut(s) 435
BstHHI GCGC 2 cut(s) 434, 1964
BstKTI GATC 8 cut(s) 109, 424, 451, 1135, 1162, 2145, 2227, 2245
BstMAI GTCTC 9 cut(s) 25, 275, 450, 462, 730, 1161, 1249, 1588, 2223
BstMBI GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
BstMWI GCNNNNNNNGC 4 cut(s) 11, 206, 272, 440
BstNSI RCATGY 3 cut(s) 317, 1217, 2095
BstPAI GACNNNNGTC 1 cut(s) 870
BstSFI CTRYAG 1 cut(s) 12
BstSLI GKGCMC 1 cut(s) 504
BstUI CGCG 1 cut(s) 1047
BstV1I GCAGC 5 cut(s) 500, 605, 619, 886, 1211
BstV2I GAAGAC 3 cut(s) 866, 1731, 1785
BstX2I RGATCY 5 cut(s) 106, 421, 448, 1159, 2242
BstXI CCANNNNNNTGG 3 cut(s) 1081, 1360, 1804
BstYI RGATCY 5 cut(s) 106, 421, 448, 1159, 2242
Bsu15I ATCGAT 2 cut(s) 1235, 1878
BsuI GTATCC 1 cut(s) 1453
BsuRI GGCC 4 cut(s) 229, 266, 855, 2042
BsuTUI ATCGAT 2 cut(s) 1235, 1878
BtrI CACGTC 1 cut(s) 1783
BtsCI GGATG 2 cut(s) 160, 2069
BtsI GCAGTG 2 cut(s) 891, 1182
BtsIMutI CAGTG 5 cut(s) 331, 867, 891, 1182, 1326
BveI ACCTGC 2 cut(s) 5, 2176
Cac8I GCNNGC 3 cut(s) 227, 2089, 2093
CaiI CAGNNNCTG 1 cut(s) 140
CciI TCATGA 1 cut(s) 1656
CfoI GCGC 2 cut(s) 434, 1964
Cfr13I GGNCC 2 cut(s) 227, 854
ClaI ATCGAT 2 cut(s) 1235, 1878
CseI GACGC 1 cut(s) 1151
Csp6I GTAC 5 cut(s) 9, 1372, 1403, 1766, 1801
CviQI GTAC 5 cut(s) 9, 1372, 1403, 1766, 1801
DdeI CTNAG 1 cut(s) 2254
DpnI GATC 8 cut(s) 108, 423, 450, 1134, 1161, 2144, 2226, 2244
DpnII GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
EaeI YGGCCR 2 cut(s) 264, 2040
Eam1104I CTCTTC 6 cut(s) 588, 681, 786, 1194, 1539, 1699
EarI CTCTTC 6 cut(s) 588, 681, 786, 1194, 1539, 1699
Eco130I CCWWGG 2 cut(s) 195, 1446
Eco24I GRGCYC 1 cut(s) 345
Eco32I GATATC 1 cut(s) 1239
Eco57I CTGAAG 3 cut(s) 123, 1268, 1350
Eco72I CACGTG 1 cut(s) 505
Eco88I CYCGRG 1 cut(s) 1943
EcoO109I RGGNCCY 1 cut(s) 854
EcoRV GATATC 1 cut(s) 1239
EcoT14I CCWWGG 2 cut(s) 195, 1446
EcoT22I ATGCAT 1 cut(s) 2097
EcoT38I GRGCYC 1 cut(s) 345
ErhI CCWWGG 2 cut(s) 195, 1446
Esp3I CGTCTC 1 cut(s) 1161
FalI AAGNNNNNCTT 2 cut(s) 1696, 1728
FaqI GGGAC 1 cut(s) 2052
FauI CCCGC 2 cut(s) 72, 218
FauNDI CATATG 2 cut(s) 879, 1668
Fnu4HI GCNGC 7 cut(s) 489, 594, 608, 831, 900, 1200, 2056
FokI GGATG 2 cut(s) 167, 2076
FriOI GRGCYC 1 cut(s) 345
Fsp4HI GCNGC 7 cut(s) 489, 594, 608, 831, 900, 1200, 2056
FspBI CTAG 7 cut(s) 149, 419, 788, 986, 1127, 1203, 2034
GlaI GCGC 2 cut(s) 433, 1963
GluI GCNGC 7 cut(s) 489, 594, 608, 831, 900, 1200, 2056
GsuI CTGGAG 1 cut(s) 7
HaeII RGCGCY 1 cut(s) 435
HaeIII GGCC 4 cut(s) 229, 266, 855, 2042
HapII CCGG 1 cut(s) 230
HgaI GACGC 1 cut(s) 1151
HhaI GCGC 2 cut(s) 434, 1964
Hin6I GCGC 2 cut(s) 432, 1962
HinP1I GCGC 2 cut(s) 432, 1962
HindIII AAGCTT 1 cut(s) 1710
HinfI GANTC 4 cut(s) 1232, 1524, 1858, 1972
HpaII CCGG 1 cut(s) 230
Hpy166II GTNNAC 7 cut(s) 29, 357, 706, 1026, 1071, 2156, 2179
Hpy188I TCNGA 2 cut(s) 1838, 2191
Hpy8I GTNNAC 7 cut(s) 29, 357, 706, 1026, 1071, 2156, 2179
HpyCH4III ACNGT 6 cut(s) 53, 326, 354, 1371, 1730, 1968
HpyCH4IV ACGT 3 cut(s) 483, 504, 1782
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 206, 272, 440
HpyF3I CTNAG 1 cut(s) 2254
HpySE526I ACGT 3 cut(s) 483, 504, 1782
HspAI GCGC 2 cut(s) 432, 1962
Kzo9I GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
LguI GCTCTTC 5 cut(s) 588, 681, 786, 1194, 1539
LmnI GCTCC 1 cut(s) 1996
Lsp1109I GCAGC 5 cut(s) 500, 605, 619, 886, 1211
LweI GCATC 3 cut(s) 1680, 1842, 2208
MaeI CTAG 7 cut(s) 149, 419, 788, 986, 1127, 1203, 2034
MaeII ACGT 3 cut(s) 483, 504, 1782
MaeIII GTNAC 7 cut(s) 514, 665, 817, 863, 968, 1139, 1225
MalI GATC 8 cut(s) 108, 423, 450, 1134, 1161, 2144, 2226, 2244
MboI GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
MfeI CAATTG 1 cut(s) 1978
MflI RGATCY 5 cut(s) 106, 421, 448, 1159, 2242
MhlI GDGCHC 3 cut(s) 345, 504, 1950
MlsI TGGCCA 1 cut(s) 2042
MluNI TGGCCA 1 cut(s) 2042
Mox20I TGGCCA 1 cut(s) 2042
Mph1103I ATGCAT 1 cut(s) 2097
MroXI GAANNNNTTC 2 cut(s) 1022, 1335
MscI TGGCCA 1 cut(s) 2042
MseI TTAA 6 cut(s) 305, 405, 1484, 1613, 1985, 2108
MslI CAYNNNNRTG 2 cut(s) 1838, 1953
Msp20I TGGCCA 1 cut(s) 2042
MspA1I CMGCKG 1 cut(s) 610
MspCI CTTAAG 1 cut(s) 2107
MspI CCGG 1 cut(s) 230
MunI CAATTG 1 cut(s) 1978
Mva1269I GAATGC 2 cut(s) 196, 2095
MvnI CGCG 1 cut(s) 1047
MwoI GCNNNNNNNGC 4 cut(s) 11, 206, 272, 440
NdeI CATATG 2 cut(s) 879, 1668
NdeII GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
NlaIV GGNNCC 6 cut(s) 574, 1161, 1420, 1479, 1584, 2116
NmuCI GTSAC 6 cut(s) 514, 665, 817, 863, 1139, 1225
NsiI ATGCAT 1 cut(s) 2097
NspI RCATGY 3 cut(s) 317, 1217, 2095
NspV TTCGAA 1 cut(s) 1503
PaeI GCATGC 1 cut(s) 2095
PagI TCATGA 1 cut(s) 1656
PaqCI CACCTGC 1 cut(s) 5
PciSI GCTCTTC 5 cut(s) 588, 681, 786, 1194, 1539
PcsI WCGNNNNNNNCGW 1 cut(s) 510
PctI GAATGC 2 cut(s) 196, 2095
PdmI GAANNNNTTC 2 cut(s) 1022, 1335
PfeI GAWTC 4 cut(s) 1232, 1524, 1858, 1972
PflFI GACNNNGTC 1 cut(s) 710
PkrI GCNGC 7 cut(s) 490, 595, 609, 832, 901, 1201, 2057
PmaCI CACGTG 1 cut(s) 505
PmlI CACGTG 1 cut(s) 505
Ppu21I YACGTR 2 cut(s) 484, 505
PshAI GACNNNNGTC 1 cut(s) 870
PshBI ATTAAT 1 cut(s) 1484
PsiI TTATAA 1 cut(s) 248
PspCI CACGTG 1 cut(s) 505
PspN4I GGNNCC 6 cut(s) 574, 1161, 1420, 1479, 1584, 2116
PspPI GGNCC 2 cut(s) 227, 854
PstI CTGCAG 1 cut(s) 16
PstNI CAGNNNCTG 1 cut(s) 140
PsuI RGATCY 5 cut(s) 106, 421, 448, 1159, 2242
PsyI GACNNNGTC 1 cut(s) 710
PvuII CAGCTG 1 cut(s) 610
RsaI GTAC 5 cut(s) 10, 1373, 1404, 1767, 1802
RsaNI GTAC 5 cut(s) 9, 1372, 1403, 1766, 1801
RseI CAYNNNNRTG 2 cut(s) 1838, 1953
SapI GCTCTTC 5 cut(s) 588, 681, 786, 1194, 1539
SaqAI TTAA 6 cut(s) 305, 405, 1484, 1613, 1985, 2108
SatI GCNGC 7 cut(s) 489, 594, 608, 831, 900, 1200, 2056
Sau3AI GATC 8 cut(s) 106, 421, 448, 1132, 1159, 2142, 2224, 2242
Sau96I GGNCC 2 cut(s) 227, 854
ScaI AGTACT 1 cut(s) 10
SduI GDGCHC 3 cut(s) 345, 504, 1950
SfaNI GCATC 3 cut(s) 1680, 1842, 2208
SfcI CTRYAG 1 cut(s) 12
SfuI TTCGAA 1 cut(s) 1503
SmiMI CAYNNNNRTG 2 cut(s) 1838, 1953
SmlI CTYRAG 1 cut(s) 2107
SmoI CTYRAG 1 cut(s) 2107
SphI GCATGC 1 cut(s) 2095
SsiI CCGC 6 cut(s) 79, 225, 830, 1045, 1925, 2055
SspI AATATT 3 cut(s) 1675, 2138, 2206
SspMI CTAG 7 cut(s) 149, 419, 788, 986, 1127, 1203, 2034
StyI CCWWGG 2 cut(s) 195, 1446
TaaI ACNGT 6 cut(s) 53, 326, 354, 1371, 1730, 1968
TaiI ACGT 3 cut(s) 486, 507, 1785
TaqI TCGA 8 cut(s) 123, 299, 339, 1235, 1503, 1548, 1878, 2227
TatI WGTACW 3 cut(s) 8, 1402, 1800
TauI GCSGC 2 cut(s) 833, 2058
TfiI GAWTC 4 cut(s) 1232, 1524, 1858, 1972
Tru1I TTAA 6 cut(s) 305, 405, 1484, 1613, 1985, 2108
Tru9I TTAA 6 cut(s) 305, 405, 1484, 1613, 1985, 2108
TscAI CASTG 5 cut(s) 331, 874, 891, 1189, 1333
TseFI GTSAC 6 cut(s) 514, 665, 817, 863, 1139, 1225
TseI GCWGC 5 cut(s) 488, 593, 607, 899, 1199
Tsp45I GTSAC 6 cut(s) 514, 665, 817, 863, 1139, 1225
TspGWI ACGGA 1 cut(s) 1185
TspRI CASTG 5 cut(s) 331, 874, 891, 1189, 1333
Tth111I GACNNNGTC 1 cut(s) 710
Vha464I CTTAAG 1 cut(s) 2107
VspI ATTAAT 1 cut(s) 1484
XapI RAATTY 6 cut(s) 217, 362, 613, 1076, 1264, 1315
XbaI TCTAGA 1 cut(s) 148
XceI RCATGY 3 cut(s) 317, 1217, 2095
XcmI CCANNNNNNNNNTGG 1 cut(s) 2080
XmnI GAANNNNTTC 2 cut(s) 1022, 1335
XspI CTAG 7 cut(s) 149, 419, 788, 986, 1127, 1203, 2034
ZrmI AGTACT 1 cut(s) 10
Zsp2I ATGCAT 1 cut(s) 2097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.