Rh7CG487700

protein ubiquitination

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0013581
Physical Location & Seq
Reverse (-)
65592633 .. 65622956
30324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG487700.1

Sequence Viewer

Length: 2316 bp
ATGTTAACCACTTGCATGAATTGGCGACAGATTGATTGTGCAAGTATGGCAAGTACTGCAGGTGTCTCCAATTCACCTATTCTGGAAGTTCTTAACCGTAATAACTATAAAACGTGGAGATTGCGGGTAAAAACTTATTTGTTGGTTGAAGATCTATGGGAGGTTGTCGAAGCAACCAGGGAACCGGCTGCAAAACCTGAAGATGATGAACCAGAATACAAGGCTTGGAAAAAAAAGAATGTCAAGGCTTTATACGCAATTCAAAATTCATGTGGACCAGAGATGTTTCATTTTATAAGTGAAACTGAAACAGCCAAAATTGCCTGGGAGACTTTGGAAAAAGTTTCGACATTAAGAGGACATGTTGAGAACAGTGCCGAAAACTTCAAGCCCTACATACCGTTCACCAAATTTGTGAGCGAAGGTGATTGGGATAAGGCAAAGGAATACCTTAAACTCAAAGAACTAGATCTCCACAGCGCCGTAAGAGCAATAGATCCAACAAACAGGTTTGGAGACAGAGCCATTCATGTAGCAGCCATGCGAGGGCACGTGAATATCGTGAATGAGTTTGTGCTGTTGATGACCCAAGAAGAGTTGAAAATGAAAAACGTTAAAGGTTCCACAGCTCTTCATTTAGCAGCATGGAATGGGCATCTGCATACTGTGAAAGAGTTAGTGTTGTTGATGGGAGAAGAACTAAACAGCATTGGTAACACAGCTCTTCACTCAGCAGTCCTTAGAGAGAAGGTGGACATTGTGGAAGAGTTGGTGCTGTTTATGAGACAAAAAGACTTGAAAATAAAAAACAACAACGGTTACACAGCTCTTCACCTAGCAGTCAAGAAGGGAAATGTGCCTATAGTGAAAAATTTAGCGGCGGTAGTGGGAGAAGTGAGAGGCCCTGATGGCGACACTGCTCTTCATATAGCAGTCAAGATGGGGGCTACACAAATTGTGACAGAGTTGGTGTTGTTGATGAGAAGGGAAGATTTGGCAATACAAAATGATGAAGGTTACACAGCTTTTCACCTAGCAGTAAAGAAGGGTAATGTGCCCACTGTGAAGGAGTTCATGACAAAAGAAAAAGAGCGCGACTTTGATAGCTATATTCAGTTCACCACTTATGTGATAAAAGGTGAATGGGATAATGCAAAGGAATGCCTTATAAAACTAGATGATCCTTTTGACGCAATAACGATAGTGGATCCAAGAGACGGATATGGAAACACTGCTCTTCATGTAGCAGCTAGAGAAGGGCATGTGCATATTGTGAAAGAATCGATATCATTGCTGAAGGTGAGACAAGAAAATTTGCAACTGAAAATCGTAGAAGAATTTGCAACTTTTGGTTCTGGTATAAATCTAGGCATCACTGAAGAAGTTCTCATGGAAAAGGCCAAACACATGGTTGAACAATACCAGAAAACACTTGCCACTATTTTGGGTCTACAAAATGCACGAGGTTCTACAGCCCTTCACATAGCAGTATCCAAGGGTAATATAGATATTGTGAAAGAGTTGGTGCCATTAATGAGAAAAGAAGATTTAGAGATAAAAGATGTTGAAGGATTCACAGCTCTTCATAATGCAGTCGAGGAGGGAAATTTAGATATTGTGAAAGAGTTAGTGCCAATGATGAGACCAGAAGGTTTGGAATTAAAAACAGCCAAGGGCAGCAATCCACTTCACCTTGCAGTCATGTTGGGGCATATGAATATTGCGAAAGAGGTGATGCCATTTATGAGAAAAGAAGCTTTGGATGAAAAAGACGGTCAAGGTTATACAGCTTTAGGATGTGCGTTAGATGTACTCAAGGATGAAGACGTGATGGAAATAGCCAAGTACATGGCTGAAAACAACAATAAAGTATTTGGCATCAAAGTGCCTACTACTAATTGGATTCCAGTTGTCTGGGTTATCGGTAGAGGCAAATGGGATTTGTGTCTCTATCTCTATGCTCTTACTCCGCTTGAGTATCTAATGCCCGAGCGCGGTAAGGATGGCGCGCACTTGGTTATCCGGTGCTTTAGAGGGAAGAAGTTTGATATTGCTTTGGACTTACTTCGGCGTTGCCCTAGATTGGCCATCAGTCCAACCGGCTTTGGATGTCCCCCTATAATGGAATTGGCTGGCATGCATTCTGCATTCTTAAGTGGAACCCAACTTGGATTTTGGCAATATTTGATCTATAATCGTGAGTCTTCTTCCCCTCTGTTGATATATACTAGCCTCTCACATATATATGCTCACACATTTAAATCAATTTTCTTTGAGTCTTTTTGTTTAGTTTTTACTTTCCCAACTGTAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

771

Amino Acids

86.9

Weight (kDa)

6.28

Isoelectric Point (pI)

28.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 31 - 57 2.1e-09 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 44 - 114 4.5e-11 gag-polypeptide of LTR copia-type
Ank_2 PF12796 165 - 234 1.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 231 - 293 2.4e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 242 - 324 2.7e-13 Ankyrin repeats (3 copies)
Ank_2 PF12796 302 - 360 7.3e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 326 - 426 9.5e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 482 - 544 1e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 516 - 566 9.9e-07 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 296, 1169
AarI CACCTGC 1 cut(s) 50
Acc36I ACCTGC 1 cut(s) 50
AccB1I GGYRCC 1 cut(s) 1525
AccI GTMKAC 1 cut(s) 1450
AccII CGCG 3 cut(s) 1095, 1995, 2009
AciI CCGC 5 cut(s) 124, 878, 881, 1970, 1995
AclI AACGTT 1 cut(s) 612
AclWI GGATC 4 cut(s) 491, 1175, 1202, 1215
AcoI YGGCCR 1 cut(s) 2085
AcsI RAATTY 6 cut(s) 265, 410, 871, 1312, 1337, 1606
AcuI CTGAAG 3 cut(s) 219, 1316, 1398
AcvI CACGTG 1 cut(s) 553
AfaI GTAC 3 cut(s) 55, 1812, 1847
AfiI CCNNNNNNNGG 5 cut(s) 546, 1217, 1994, 2083, 2122
AflII CTTAAG 1 cut(s) 2152
AflIII ACRYGT 1 cut(s) 361
AgsI TTSAA 7 cut(s) 149, 263, 388, 601, 799, 1415, 1568
AjiI CACGTC 1 cut(s) 1828
AjnI CCWGG 2 cut(s) 176, 323
AleI CACNNNNGTG 1 cut(s) 1127
AloI GAACNNNNNNTCC 2 cut(s) 456, 488
AluBI AGCT 9 cut(s) 629, 722, 827, 1025, 1107, 1250, 1580, 1757, 1790
AluI AGCT 9 cut(s) 629, 722, 827, 1025, 1107, 1250, 1580, 1757, 1790
Alw26I GTCTC 8 cut(s) 70, 323, 510, 778, 1209, 1297, 1636, 1952
AlwI GGATC 4 cut(s) 491, 1175, 1202, 1215
Ama87I CYCGRG 1 cut(s) 1988
AoxI GGCC 3 cut(s) 901, 1398, 2085
ApeKI GCWGC 5 cut(s) 188, 536, 641, 1247, 1677
ApoI RAATTY 6 cut(s) 265, 410, 871, 1312, 1337, 1606
AseI ATTAAT 1 cut(s) 1532
Asp700I GAANNNNTTC 2 cut(s) 1070, 1383
AspLEI GCGC 5 cut(s) 482, 1095, 1995, 2009, 2011
AspS9I GGNCC 2 cut(s) 275, 902
AvaI CYCGRG 1 cut(s) 1988
AvaII GGWCC 1 cut(s) 275
BaeGI GKGCMC 2 cut(s) 552, 1059
BalI TGGCCA 1 cut(s) 2087
BamHI GGATCC 1 cut(s) 1207
BanI GGYRCC 1 cut(s) 1525
BauI CACGAG 1 cut(s) 1461
BbrPI CACGTG 1 cut(s) 553
BbsI GAAGAC 2 cut(s) 1830, 2196
BbvI GCAGC 5 cut(s) 175, 548, 653, 1259, 1689
BccI CCATC 6 cut(s) 682, 902, 934, 1825, 1997, 2096
BceAI ACGGC 1 cut(s) 467
BcgI CGANNNNNNTGC 2 cut(s) 1273, 1307
BciT130I CCWGG 2 cut(s) 178, 325
BciVI GTATCC 1 cut(s) 1501
BcoDI GTCTC 8 cut(s) 70, 323, 510, 778, 1209, 1297, 1636, 1952
BfaI CTAG 8 cut(s) 467, 836, 1034, 1175, 1251, 1367, 2079, 2229
BfmI CTRYAG 3 cut(s) 57, 861, 1470
BfoI RGCGCY 1 cut(s) 483
BfrI CTTAAG 1 cut(s) 2152
BfuAI ACCTGC 1 cut(s) 50
BfuI GTATCC 1 cut(s) 1501
BglI GCCNNNNNGGC 1 cut(s) 909
BglII AGATCT 2 cut(s) 151, 469
BisI GCNGC 6 cut(s) 189, 537, 642, 879, 1248, 1678
BlsI GCNGC 6 cut(s) 190, 538, 643, 880, 1249, 1679
BmcAI AGTACT 1 cut(s) 55
Bme1390I CCNGG 2 cut(s) 178, 325
Bme18I GGWCC 1 cut(s) 275
BmeT110I CYCGRG 1 cut(s) 1988
BmgBI CACGTC 1 cut(s) 1828
BmgT120I GGNCC 2 cut(s) 275, 902
BmiI GGNNCC 5 cut(s) 183, 622, 1209, 1527, 2161
BmrFI CCNGG 2 cut(s) 178, 325
BmsI GCATC 4 cut(s) 664, 1380, 1725, 1887
BpiI GAAGAC 2 cut(s) 1830, 2196
BpuEI CTTGAG 2 cut(s) 1799, 1994
Bsa29I ATCGAT 1 cut(s) 1283
BsaAI YACGTR 1 cut(s) 553
BsaI GGTCTC 1 cut(s) 1636
BsaJI CCNNGG 4 cut(s) 177, 324, 1494, 1671
BsaWI WCCGGW 1 cut(s) 2022
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bsc4I CCNNNNNNNGG 5 cut(s) 546, 1217, 1994, 2083, 2122
Bse118I RCCGGY 2 cut(s) 184, 2099
Bse1I ACTGG 1 cut(s) 1907
Bse3DI GCAATG 1 cut(s) 1289
BseBI CCWGG 2 cut(s) 178, 325
BseCI ATCGAT 1 cut(s) 1283
BseDI CCNNGG 4 cut(s) 177, 324, 1494, 1671
BseGI GGATG 5 cut(s) 1768, 1802, 1825, 2008, 2114
BseLI CCNNNNNNNGG 5 cut(s) 546, 1217, 1994, 2083, 2122
BseMI GCAATG 1 cut(s) 1289
BseMII CTCAG 1 cut(s) 744
BseNI ACTGG 1 cut(s) 1907
BsePI GCGCGC 1 cut(s) 2007
BseRI GAGGAG 1 cut(s) 1613
BseSI GKGCMC 2 cut(s) 552, 1059
BseXI GCAGC 5 cut(s) 175, 548, 653, 1259, 1689
Bsh1236I CGCG 3 cut(s) 1095, 1995, 2009
BshFI GGCC 3 cut(s) 903, 1400, 2087
BshNI GGYRCC 1 cut(s) 1525
BshVI ATCGAT 1 cut(s) 1283
BsiHKCI CYCGRG 1 cut(s) 1988
BsiSI CCGG 3 cut(s) 185, 2023, 2100
BslFI GGGAC 1 cut(s) 2097
BslI CCNNNNNNNGG 5 cut(s) 546, 1217, 1994, 2083, 2122
BsmAI GTCTC 8 cut(s) 70, 323, 510, 778, 1209, 1297, 1636, 1952
BsmBI CGTCTC 1 cut(s) 1209
BsmFI GGGAC 1 cut(s) 2097
BsmI GAATGC 3 cut(s) 1166, 2140, 2147
BsnI GGCC 3 cut(s) 903, 1400, 2087
Bso31I GGTCTC 1 cut(s) 1636
BsoBI CYCGRG 1 cut(s) 1988
Bsp1286I GDGCHC 2 cut(s) 552, 1059
Bsp143I GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
BspACI CCGC 5 cut(s) 124, 878, 881, 1970, 1995
BspANI GGCC 3 cut(s) 903, 1400, 2087
BspCNI CTCAG 1 cut(s) 743
BspDI ATCGAT 1 cut(s) 1283
BspFNI CGCG 3 cut(s) 1095, 1995, 2009
BspHI TCATGA 1 cut(s) 1074
BspLI GGNNCC 5 cut(s) 183, 622, 1209, 1527, 2161
BspMAI CTGCAG 1 cut(s) 61
BspMI ACCTGC 1 cut(s) 50
BspPI GGATC 4 cut(s) 491, 1175, 1202, 1215
BspQI GCTCTTC 6 cut(s) 636, 729, 834, 927, 1242, 1587
BspT107I GGYRCC 1 cut(s) 1525
BspTI CTTAAG 1 cut(s) 2152
BspTNI GGTCTC 1 cut(s) 1636
BsrDI GCAATG 1 cut(s) 1289
BsrFI RCCGGY 2 cut(s) 184, 2099
BsrI ACTGG 1 cut(s) 1907
BssAI RCCGGY 2 cut(s) 184, 2099
BssECI CCNNGG 4 cut(s) 177, 324, 1494, 1671
BssHII GCGCGC 1 cut(s) 2007
BssMI GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
BssSI CACGAG 1 cut(s) 1461
BssT1I CCWWGG 2 cut(s) 1494, 1671
Bst2BI CACGAG 1 cut(s) 1461
Bst2UI CCWGG 2 cut(s) 178, 325
Bst4CI ACNGT 8 cut(s) 98, 374, 402, 667, 818, 1063, 1775, 2308
Bst6I CTCTTC 8 cut(s) 588, 636, 729, 759, 834, 927, 1242, 1587
BstAFI CTTAAG 1 cut(s) 2152
BstAPI GCANNNNNTGC 1 cut(s) 56
BstBAI YACGTR 1 cut(s) 553
BstC8I GCNNGC 3 cut(s) 2009, 2134, 2138
BstDEI CTNAG 2 cut(s) 730, 740
BstF5I GGATG 5 cut(s) 1768, 1802, 1825, 2008, 2114
BstFNI CGCG 3 cut(s) 1095, 1995, 2009
BstH2I RGCGCY 1 cut(s) 483
BstHHI GCGC 5 cut(s) 482, 1095, 1995, 2009, 2011
BstKTI GATC 6 cut(s) 154, 472, 499, 1183, 1210, 2190
BstMAI GTCTC 8 cut(s) 70, 323, 510, 778, 1209, 1297, 1636, 1952
BstMBI GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
BstMWI GCNNNNNNNGC 6 cut(s) 47, 56, 254, 320, 488, 909
BstNI CCWGG 2 cut(s) 178, 325
BstNSI RCATGY 3 cut(s) 365, 1265, 2140
BstSCI CCNGG 2 cut(s) 176, 323
BstSFI CTRYAG 3 cut(s) 57, 861, 1470
BstSLI GKGCMC 2 cut(s) 552, 1059
BstUI CGCG 3 cut(s) 1095, 1995, 2009
BstV1I GCAGC 5 cut(s) 175, 548, 653, 1259, 1689
BstV2I GAAGAC 2 cut(s) 1830, 2196
BstX2I RGATCY 4 cut(s) 151, 469, 496, 1207
BstXI CCANNNNNNTGG 4 cut(s) 1408, 1444, 1849, 1914
BstYI RGATCY 4 cut(s) 151, 469, 496, 1207
Bsu15I ATCGAT 1 cut(s) 1283
BsuI GTATCC 1 cut(s) 1501
BsuRI GGCC 3 cut(s) 903, 1400, 2087
BsuTUI ATCGAT 1 cut(s) 1283
BtrI CACGTC 1 cut(s) 1828
BtsCI GGATG 5 cut(s) 1768, 1802, 1825, 2008, 2114
BtsI GCAGTG 2 cut(s) 915, 1230
BtsIMutI CAGTG 5 cut(s) 379, 915, 1059, 1230, 1374
BveI ACCTGC 1 cut(s) 50
Cac8I GCNNGC 3 cut(s) 2009, 2134, 2138
CciI TCATGA 1 cut(s) 1074
CfoI GCGC 5 cut(s) 482, 1095, 1995, 2009, 2011
Cfr10I RCCGGY 2 cut(s) 184, 2099
Cfr13I GGNCC 2 cut(s) 275, 902
ClaI ATCGAT 1 cut(s) 1283
CseI GACGC 1 cut(s) 1199
Csp6I GTAC 3 cut(s) 54, 1811, 1846
CviQI GTAC 3 cut(s) 54, 1811, 1846
DdeI CTNAG 2 cut(s) 730, 740
DpnI GATC 6 cut(s) 153, 471, 498, 1182, 1209, 2189
DpnII GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
DraI TTTAAA 1 cut(s) 2260
EaeI YGGCCR 1 cut(s) 2085
Eam1104I CTCTTC 8 cut(s) 588, 636, 729, 759, 834, 927, 1242, 1587
EarI CTCTTC 8 cut(s) 588, 636, 729, 759, 834, 927, 1242, 1587
Eco130I CCWWGG 2 cut(s) 1494, 1671
Eco31I GGTCTC 1 cut(s) 1636
Eco32I GATATC 1 cut(s) 1287
Eco47I GGWCC 1 cut(s) 275
Eco57I CTGAAG 3 cut(s) 219, 1316, 1398
Eco72I CACGTG 1 cut(s) 553
Eco88I CYCGRG 1 cut(s) 1988
EcoO109I RGGNCCY 1 cut(s) 902
EcoRII CCWGG 2 cut(s) 176, 323
EcoRV GATATC 1 cut(s) 1287
EcoT14I CCWWGG 2 cut(s) 1494, 1671
EcoT22I ATGCAT 1 cut(s) 2142
ErhI CCWWGG 2 cut(s) 1494, 1671
Esp3I CGTCTC 1 cut(s) 1209
FaqI GGGAC 1 cut(s) 2097
FauI CCCGC 1 cut(s) 117
FauNDI CATATG 1 cut(s) 1713
FblI GTMKAC 1 cut(s) 1450
Fnu4HI GCNGC 6 cut(s) 189, 537, 642, 879, 1248, 1678
FokI GGATG 5 cut(s) 1775, 1809, 1832, 2015, 2121
Fsp4HI GCNGC 6 cut(s) 189, 537, 642, 879, 1248, 1678
FspBI CTAG 8 cut(s) 467, 836, 1034, 1175, 1251, 1367, 2079, 2229
GlaI GCGC 5 cut(s) 481, 1094, 1994, 2008, 2010
GluI GCNGC 6 cut(s) 189, 537, 642, 879, 1248, 1678
HaeII RGCGCY 1 cut(s) 483
HaeIII GGCC 3 cut(s) 903, 1400, 2087
HapII CCGG 3 cut(s) 185, 2023, 2100
HgaI GACGC 1 cut(s) 1199
HhaI GCGC 5 cut(s) 482, 1095, 1995, 2009, 2011
Hin6I GCGC 5 cut(s) 480, 1093, 1993, 2007, 2009
HinP1I GCGC 5 cut(s) 480, 1093, 1993, 2007, 2009
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 1755
HinfI GANTC 5 cut(s) 1280, 1572, 1903, 2201, 2276
HpaI GTTAAC 1 cut(s) 6
HpaII CCGG 3 cut(s) 185, 2023, 2100
Hpy166II GTNNAC 6 cut(s) 6, 275, 405, 754, 1119, 1451
Hpy188III TCNNGA 6 cut(s) 83, 562, 844, 937, 1075, 2198
Hpy8I GTNNAC 6 cut(s) 6, 275, 405, 754, 1119, 1451
HpyCH4III ACNGT 8 cut(s) 98, 374, 402, 667, 818, 1063, 1775, 2308
HpyCH4IV ACGT 4 cut(s) 113, 552, 612, 1827
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 56, 254, 320, 488, 909
HpyF3I CTNAG 2 cut(s) 730, 740
HpySE526I ACGT 4 cut(s) 113, 552, 612, 1827
HspAI GCGC 5 cut(s) 480, 1093, 1993, 2007, 2009
KspAI GTTAAC 1 cut(s) 6
Kzo9I GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
LguI GCTCTTC 6 cut(s) 636, 729, 834, 927, 1242, 1587
Lsp1109I GCAGC 5 cut(s) 175, 548, 653, 1259, 1689
LweI GCATC 4 cut(s) 664, 1380, 1725, 1887
MaeI CTAG 8 cut(s) 467, 836, 1034, 1175, 1251, 1367, 2079, 2229
MaeII ACGT 4 cut(s) 113, 552, 612, 1827
MaeIII GTNAC 4 cut(s) 713, 818, 958, 1016
MalI GATC 6 cut(s) 153, 471, 498, 1182, 1209, 2189
MboI GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
MflI RGATCY 4 cut(s) 151, 469, 496, 1207
MhlI GDGCHC 2 cut(s) 552, 1059
MlsI TGGCCA 1 cut(s) 2087
MluNI TGGCCA 1 cut(s) 2087
MlyI GAGTC 2 cut(s) 2210, 2285
MmeI TCCRAC 2 cut(s) 524, 2120
Mox20I TGGCCA 1 cut(s) 2087
Mph1103I ATGCAT 1 cut(s) 2142
MroXI GAANNNNTTC 2 cut(s) 1070, 1383
MscI TGGCCA 1 cut(s) 2087
MslI CAYNNNNRTG 4 cut(s) 14, 1127, 1883, 2244
Msp20I TGGCCA 1 cut(s) 2087
MspCI CTTAAG 1 cut(s) 2152
MspI CCGG 3 cut(s) 185, 2023, 2100
MspR9I CCNGG 2 cut(s) 178, 325
Mva1269I GAATGC 3 cut(s) 1166, 2140, 2147
MvaI CCWGG 2 cut(s) 178, 325
MvnI CGCG 3 cut(s) 1095, 1995, 2009
MwoI GCNNNNNNNGC 6 cut(s) 47, 56, 254, 320, 488, 909
NdeI CATATG 1 cut(s) 1713
NdeII GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
NlaIV GGNNCC 5 cut(s) 183, 622, 1209, 1527, 2161
NmuCI GTSAC 1 cut(s) 958
NsiI ATGCAT 1 cut(s) 2142
NspI RCATGY 3 cut(s) 365, 1265, 2140
OliI CACNNNNGTG 1 cut(s) 1127
PaeI GCATGC 1 cut(s) 2140
PagI TCATGA 1 cut(s) 1074
PaqCI CACCTGC 1 cut(s) 50
PauI GCGCGC 1 cut(s) 2007
PciI ACATGT 1 cut(s) 361
PciSI GCTCTTC 6 cut(s) 636, 729, 834, 927, 1242, 1587
PcsI WCGNNNNNNNCGW 1 cut(s) 558
PctI GAATGC 3 cut(s) 1166, 2140, 2147
PdmI GAANNNNTTC 2 cut(s) 1070, 1383
PfeI GAWTC 3 cut(s) 1280, 1572, 1903
PkrI GCNGC 6 cut(s) 190, 538, 643, 880, 1249, 1679
PleI GAGTC 2 cut(s) 2209, 2284
PmaCI CACGTG 1 cut(s) 553
PmlI CACGTG 1 cut(s) 553
PpsI GAGTC 2 cut(s) 2209, 2284
Ppu21I YACGTR 1 cut(s) 553
PscI ACATGT 1 cut(s) 361
PshBI ATTAAT 1 cut(s) 1532
PsiI TTATAA 2 cut(s) 296, 1169
Psp1406I AACGTT 1 cut(s) 612
Psp6I CCWGG 2 cut(s) 176, 323
PspCI CACGTG 1 cut(s) 553
PspGI CCWGG 2 cut(s) 176, 323
PspN4I GGNNCC 5 cut(s) 183, 622, 1209, 1527, 2161
PspPI GGNCC 2 cut(s) 275, 902
PstI CTGCAG 1 cut(s) 61
PsuI RGATCY 4 cut(s) 151, 469, 496, 1207
PteI GCGCGC 1 cut(s) 2007
RsaI GTAC 3 cut(s) 55, 1812, 1847
RsaNI GTAC 3 cut(s) 54, 1811, 1846
RseI CAYNNNNRTG 4 cut(s) 14, 1127, 1883, 2244
SapI GCTCTTC 6 cut(s) 636, 729, 834, 927, 1242, 1587
SatI GCNGC 6 cut(s) 189, 537, 642, 879, 1248, 1678
Sau3AI GATC 6 cut(s) 151, 469, 496, 1180, 1207, 2187
Sau96I GGNCC 2 cut(s) 275, 902
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 2 cut(s) 2210, 2285
ScrFI CCNGG 2 cut(s) 178, 325
SduI GDGCHC 2 cut(s) 552, 1059
SfaNI GCATC 4 cut(s) 664, 1380, 1725, 1887
SfcI CTRYAG 3 cut(s) 57, 861, 1470
SinI GGWCC 1 cut(s) 275
SmiI ATTTAAAT 1 cut(s) 2260
SmiMI CAYNNNNRTG 4 cut(s) 14, 1127, 1883, 2244
SmlI CTYRAG 3 cut(s) 1814, 1973, 2152
SmoI CTYRAG 3 cut(s) 1814, 1973, 2152
SphI GCATGC 1 cut(s) 2140
SsiI CCGC 5 cut(s) 124, 878, 881, 1970, 1995
SspI AATATT 2 cut(s) 1720, 2183
SspMI CTAG 8 cut(s) 467, 836, 1034, 1175, 1251, 1367, 2079, 2229
StyD4I CCNGG 2 cut(s) 176, 323
StyI CCWWGG 2 cut(s) 1494, 1671
SwaI ATTTAAAT 1 cut(s) 2260
TaaI ACNGT 8 cut(s) 98, 374, 402, 667, 818, 1063, 1775, 2308
TaiI ACGT 4 cut(s) 116, 555, 615, 1830
TaqI TCGA 4 cut(s) 168, 347, 1283, 1596
TatI WGTACW 3 cut(s) 53, 1810, 1845
TauI GCSGC 1 cut(s) 881
TfiI GAWTC 3 cut(s) 1280, 1572, 1903
TscAI CASTG 5 cut(s) 379, 922, 1066, 1237, 1381
TseFI GTSAC 1 cut(s) 958
TseI GCWGC 5 cut(s) 188, 536, 641, 1247, 1677
Tsp45I GTSAC 1 cut(s) 958
TspGWI ACGGA 1 cut(s) 1233
TspRI CASTG 5 cut(s) 379, 922, 1066, 1237, 1381
Vha464I CTTAAG 1 cut(s) 2152
VpaK11BI GGWCC 1 cut(s) 275
VspI ATTAAT 1 cut(s) 1532
XapI RAATTY 6 cut(s) 265, 410, 871, 1312, 1337, 1606
XceI RCATGY 3 cut(s) 365, 1265, 2140
XmiI GTMKAC 1 cut(s) 1450
XmnI GAANNNNTTC 2 cut(s) 1070, 1383
XspI CTAG 8 cut(s) 467, 836, 1034, 1175, 1251, 1367, 2079, 2229
ZrmI AGTACT 1 cut(s) 55
Zsp2I ATGCAT 1 cut(s) 2142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.