Rh7CG230800

taxadien-5-alpha-ol O-acetyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0014513
Physical Location & Seq
Forward (+)
21602138 .. 21602689
552 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG230800.1

Sequence Viewer

Length: 552 bp
ATGACATTGTCCAATGGTGTCACCATGCTCCTCCCAGAAGCACACATTGAATCCGTCCAGTCTGTAATGCCCTTCAAGATCACCGATCCGCGGCCGGCACGCCAAGTGTCGGCCGCAGACCCCGTCGGTTTGGGAATATTCCAACAGTGCCTGCACATAGTTCTCTACTACACAAAAGCAACCGAAGAGGACTCACGTTGGCTCCATGCTGGTTGGATCAAGGAATCACTTTCGAGGGCGTTGCTGGAGCAACCGCTATTTGCTGGCCGTTTACGCACGAGTGATGGGGGAGAGTTGGAGATTGTGGCAAATGACAGCGGCGTTAGACTCGTCGAAGCTCGTACTCCGATGACCATGGCTGAGTTTCTGTCTTACAAGGACAGCACGGAGGATACAGAAGATAAACTTGTGTTTTGGAAAACTATTGATGAACGAAGTCCTCAGTACTCTCCTCTCTTTTATGTTCAGGTACTTGGTACTGGATTTCTTGCTTCGTTTTTGTTTTTGGGATATATTGAATTCACTACTATCTTTTGTTTTGTTTTCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

183

Amino Acids

20.71

Weight (kDa)

4.97

Isoelectric Point (pI)

57.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 52 - 157 6.1e-13 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014513)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G02890
fragaria_vesca FvH4_5g20090
malus_domestica MD04G1050800.v1.1
prunus_persica Prupe.5G059300_v2.0.a1
pyrus_communis pycom04g04470
rosa_chinensis RchiOBHm_Chr7g0204981
rosa_laevigata RLG00000003418
rosa_multiflora Rmu_sc0005112.1_g000025 Rmu_sc0024226.1_g000001
rosa_roxburghii Rroxscaffold_3G00252630
rosa_rugosa Rorug07G0086800
rosa_samantha Rh7AG217800 Rh7BG214700 Rh7CG230800 Rh7CG230900 Rh7DG225100
rosa_wichuraiana Rw7G018870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 91
AciI CCGC 5 cut(s) 89, 91, 114, 254, 318
AclWI GGATC 2 cut(s) 80, 224
AcoI YGGCCR 3 cut(s) 92, 111, 265
AcsI RAATTY 1 cut(s) 518
AfaI GTAC 4 cut(s) 343, 446, 471, 478
AfiI CCNNNNNNNGG 2 cut(s) 90, 109
AgsI TTSAA 3 cut(s) 50, 76, 518
AluBI AGCT 1 cut(s) 338
AluI AGCT 1 cut(s) 338
AlwI GGATC 2 cut(s) 80, 224
AlwNI CAGNNNCTG 1 cut(s) 151
AoxI GGCC 3 cut(s) 92, 111, 265
ApoI RAATTY 1 cut(s) 518
AsuHPI GGTGA 2 cut(s) 13, 73
BauI CACGAG 1 cut(s) 277
BccI CCATC 1 cut(s) 278
BceAI ACGGC 1 cut(s) 252
BcgI CGANNNNNNTGC 2 cut(s) 223, 257
BciVI GTATCC 1 cut(s) 385
BfuI GTATCC 1 cut(s) 385
BisI GCNGC 3 cut(s) 92, 114, 319
BlsI GCNGC 3 cut(s) 93, 115, 320
BmcAI AGTACT 1 cut(s) 446
BmiI GGNNCC 1 cut(s) 203
BpmI CTGGAG 1 cut(s) 266
BsaJI CCNNGG 2 cut(s) 89, 354
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
Bsc4I CCNNNNNNNGG 2 cut(s) 90, 109
Bse118I RCCGGY 1 cut(s) 94
Bse1I ACTGG 2 cut(s) 58, 484
BseDI CCNNGG 2 cut(s) 89, 354
BseLI CCNNNNNNNGG 2 cut(s) 90, 109
BseMII CTCAG 2 cut(s) 351, 455
BseNI ACTGG 2 cut(s) 58, 484
BseRI GAGGAG 2 cut(s) 20, 441
BseX3I CGGCCG 2 cut(s) 92, 111
BsgI GTGCAG 1 cut(s) 137
Bsh1236I CGCG 1 cut(s) 91
Bsh1285I CGRYCG 2 cut(s) 95, 114
BshFI GGCC 3 cut(s) 94, 113, 267
BsiEI CGRYCG 2 cut(s) 95, 114
BsiSI CCGG 1 cut(s) 95
BslI CCNNNNNNNGG 2 cut(s) 90, 109
BsnI GGCC 3 cut(s) 94, 113, 267
Bsp143I GATC 3 cut(s) 78, 85, 216
Bsp19I CCATGG 1 cut(s) 354
BspACI CCGC 5 cut(s) 89, 91, 114, 254, 318
BspANI GGCC 3 cut(s) 94, 113, 267
BspCNI CTCAG 2 cut(s) 352, 454
BspFNI CGCG 1 cut(s) 91
BspLI GGNNCC 1 cut(s) 203
BspPI GGATC 2 cut(s) 80, 224
BsrFI RCCGGY 1 cut(s) 94
BsrI ACTGG 2 cut(s) 58, 484
BssAI RCCGGY 1 cut(s) 94
BssECI CCNNGG 2 cut(s) 89, 354
BssMI GATC 3 cut(s) 78, 85, 216
BssSI CACGAG 1 cut(s) 277
BssT1I CCWWGG 1 cut(s) 354
Bst2BI CACGAG 1 cut(s) 277
Bst4CI ACNGT 1 cut(s) 147
Bst6I CTCTTC 1 cut(s) 180
BstC8I GCNNGC 4 cut(s) 96, 100, 152, 265
BstDEI CTNAG 2 cut(s) 360, 441
BstDSI CCRYGG 2 cut(s) 89, 354
BstFNI CGCG 1 cut(s) 91
BstKTI GATC 3 cut(s) 81, 88, 219
BstMBI GATC 3 cut(s) 78, 85, 216
BstMCI CGRYCG 2 cut(s) 95, 114
BstMWI GCNNNNNNNGC 1 cut(s) 273
BstUI CGCG 1 cut(s) 91
BstZI CGGCCG 2 cut(s) 92, 111
BsuI GTATCC 1 cut(s) 385
BsuRI GGCC 3 cut(s) 94, 113, 267
BtgI CCRYGG 2 cut(s) 89, 354
BtsIMutI CAGTG 1 cut(s) 152
Cac8I GCNNGC 4 cut(s) 96, 100, 152, 265
CaiI CAGNNNCTG 1 cut(s) 151
Cfr10I RCCGGY 1 cut(s) 94
Cfr42I CCGCGG 1 cut(s) 92
Csp6I GTAC 4 cut(s) 342, 445, 470, 477
CviAII CATG 3 cut(s) 25, 206, 355
CviJI RGCY 6 cut(s) 94, 113, 202, 267, 338, 359
CviKI_1 RGCY 6 cut(s) 94, 113, 202, 267, 338, 359
CviQI GTAC 4 cut(s) 342, 445, 470, 477
DdeI CTNAG 2 cut(s) 360, 441
DpnI GATC 3 cut(s) 80, 87, 218
DpnII GATC 3 cut(s) 78, 85, 216
EaeI YGGCCR 3 cut(s) 92, 111, 265
EagI CGGCCG 2 cut(s) 92, 111
Eam1104I CTCTTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 180
EclXI CGGCCG 2 cut(s) 92, 111
Eco130I CCWWGG 1 cut(s) 354
Eco52I CGGCCG 2 cut(s) 92, 111
EcoRI GAATTC 1 cut(s) 518
EcoT14I CCWWGG 1 cut(s) 354
ErhI CCWWGG 1 cut(s) 354
FaeI CATG 3 cut(s) 28, 209, 358
FaiI YATR 6 cut(s) 26, 158, 207, 356, 462, 513
FalI AAGNNNNNCTT 2 cut(s) 390, 422
FatI CATG 3 cut(s) 24, 205, 354
Fnu4HI GCNGC 3 cut(s) 92, 114, 319
Fsp4HI GCNGC 3 cut(s) 92, 114, 319
GluI GCNGC 3 cut(s) 92, 114, 319
GsuI CTGGAG 1 cut(s) 266
HaeIII GGCC 3 cut(s) 94, 113, 267
HapII CCGG 1 cut(s) 95
Hin1II CATG 3 cut(s) 28, 209, 358
HinfI GANTC 4 cut(s) 50, 191, 224, 327
HpaII CCGG 1 cut(s) 95
HphI GGTGA 2 cut(s) 13, 73
Hpy166II GTNNAC 1 cut(s) 272
Hpy188I TCNGA 1 cut(s) 348
Hpy188III TCNNGA 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 272
Hpy99I CGWCG 2 cut(s) 128, 335
HpyAV CCTTC 1 cut(s) 82
HpyCH4III ACNGT 1 cut(s) 147
HpyCH4IV ACGT 1 cut(s) 196
HpyCH4V TGCA 1 cut(s) 154
HpyF10VI GCNNNNNNNGC 1 cut(s) 273
HpyF3I CTNAG 2 cut(s) 360, 441
HpySE526I ACGT 1 cut(s) 196
Hsp92II CATG 3 cut(s) 28, 209, 358
KroI GCCGGC 1 cut(s) 94
KroNI GCCGGC 1 cut(s) 96
KspI CCGCGG 1 cut(s) 92
Kzo9I GATC 3 cut(s) 78, 85, 216
LmnI GCTCC 3 cut(s) 33, 207, 247
MaeII ACGT 1 cut(s) 196
MaeIII GTNAC 1 cut(s) 19
MalI GATC 3 cut(s) 80, 87, 218
MboI GATC 3 cut(s) 78, 85, 216
MboII GAAGA 2 cut(s) 197, 410
MluCI AATT 1 cut(s) 518
MlyI GAGTC 2 cut(s) 185, 321
MmeI TCCRAC 3 cut(s) 166, 194, 276
MnlI CCTC 6 cut(s) 41, 181, 228, 382, 450, 462
MroNI GCCGGC 1 cut(s) 94
MspA1I CMGCKG 2 cut(s) 91, 318
MspI CCGG 1 cut(s) 95
MvnI CGCG 1 cut(s) 91
MwoI GCNNNNNNNGC 1 cut(s) 273
NaeI GCCGGC 1 cut(s) 96
NcoI CCATGG 1 cut(s) 354
NdeII GATC 3 cut(s) 78, 85, 216
NgoMIV GCCGGC 1 cut(s) 94
NlaIII CATG 3 cut(s) 28, 209, 358
NlaIV GGNNCC 1 cut(s) 203
NmuCI GTSAC 1 cut(s) 19
PdiI GCCGGC 1 cut(s) 96
PfeI GAWTC 2 cut(s) 50, 224
PflFI GACNNNGTC 2 cut(s) 7, 122
PkrI GCNGC 3 cut(s) 93, 115, 320
PleI GAGTC 2 cut(s) 185, 321
PpsI GAGTC 2 cut(s) 185, 321
PspN4I GGNNCC 1 cut(s) 203
PstNI CAGNNNCTG 1 cut(s) 151
PsyI GACNNNGTC 2 cut(s) 7, 122
RsaI GTAC 4 cut(s) 343, 446, 471, 478
RsaNI GTAC 4 cut(s) 342, 445, 470, 477
SacII CCGCGG 1 cut(s) 92
SatI GCNGC 3 cut(s) 92, 114, 319
Sau3AI GATC 3 cut(s) 78, 85, 216
ScaI AGTACT 1 cut(s) 446
SchI GAGTC 2 cut(s) 185, 321
SetI ASST 4 cut(s) 199, 340, 471, 551
Sfr303I CCGCGG 1 cut(s) 92
SgrBI CCGCGG 1 cut(s) 92
Sse9I AATT 1 cut(s) 518
SsiI CCGC 5 cut(s) 89, 91, 114, 254, 318
SspI AATATT 1 cut(s) 138
StyI CCWWGG 1 cut(s) 354
TaaI ACNGT 1 cut(s) 147
TaiI ACGT 1 cut(s) 199
TaqI TCGA 2 cut(s) 233, 333
TasI AATT 1 cut(s) 518
TatI WGTACW 1 cut(s) 444
TauI GCSGC 3 cut(s) 94, 116, 321
TfiI GAWTC 2 cut(s) 50, 224
TscAI CASTG 1 cut(s) 152
TseFI GTSAC 1 cut(s) 19
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 1 cut(s) 444
TspGWI ACGGA 2 cut(s) 43, 401
TspRI CASTG 1 cut(s) 152
Tth111I GACNNNGTC 2 cut(s) 7, 122
XapI RAATTY 1 cut(s) 518
ZrmI AGTACT 1 cut(s) 446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.