Rh7CG235900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
22083213 .. 22083948
736 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG235900.1

Sequence Viewer

Length: 339 bp
ATGCCAACCAAAAGGGTACCTTGCTGGAAAGATAAGCCGGTATTGGTATCGGTTTATGTGGAGAGGCCAAAGAGAAGGCCAGCTTCTTCAACTCATCATCACCACCACCACCACCATCATCATATTCATCACACCATCAAGCGAGAGGTTATTTCTCATAGGGATGGTGCTGGTGGCAAAGGCTATACTACTAGTAGGAGAGCTGAGCTCCTTCAGTACTCTCAACGCCTTCGCCAATCTGCTAGAATAGCTCTAGCATCACCATCACCATCACCATCTATACCCTCTGTTCCAAATCCAAGCCACACCAGCAATCCTCAACCTCAGGCTGAGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

112

Amino Acids

12.66

Weight (kDa)

10.95

Isoelectric Point (pI)

82.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 16
AccB1I GGYRCC 1 cut(s) 16
AcuI CTGAAG 1 cut(s) 197
AfaI GTAC 2 cut(s) 18, 218
AgsI TTSAA 1 cut(s) 90
AhlI ACTAGT 1 cut(s) 191
AluBI AGCT 4 cut(s) 83, 203, 208, 251
AluI AGCT 4 cut(s) 83, 203, 208, 251
Alw21I GWGCWC 1 cut(s) 210
AoxI GGCC 2 cut(s) 65, 77
Asp718I GGTACC 1 cut(s) 16
AsuHPI GGTGA 4 cut(s) 92, 252, 258, 264
AxyI CCTNAGG 1 cut(s) 324
BanI GGYRCC 1 cut(s) 16
BanII GRGCYC 1 cut(s) 210
Bbv12I GWGCWC 1 cut(s) 210
BbvCI CCTCAGC 1 cut(s) 330
BccI CCATC 6 cut(s) 123, 143, 158, 271, 277, 283
BcuI ACTAGT 1 cut(s) 191
BfaI CTAG 3 cut(s) 192, 243, 254
BlpI GCTNAGC 1 cut(s) 204
BmcAI AGTACT 1 cut(s) 218
BmiI GGNNCC 1 cut(s) 18
BmsI GCATC 1 cut(s) 266
BplI GAGNNNNNCTC 2 cut(s) 192, 224
Bpu10I CCTNAGC 1 cut(s) 330
Bpu1102I GCTNAGC 1 cut(s) 204
Bse118I RCCGGY 1 cut(s) 37
Bse21I CCTNAGG 1 cut(s) 324
BseGI GGATG 1 cut(s) 169
BseMII CTCAG 3 cut(s) 195, 321, 338
BshFI GGCC 2 cut(s) 67, 79
BshNI GGYRCC 1 cut(s) 16
BsiHKAI GWGCWC 1 cut(s) 210
BsiSI CCGG 1 cut(s) 38
BsnI GGCC 2 cut(s) 67, 79
Bsp1286I GDGCHC 1 cut(s) 210
Bsp1720I GCTNAGC 1 cut(s) 204
BspANI GGCC 2 cut(s) 67, 79
BspCNI CTCAG 3 cut(s) 196, 322, 337
BspLI GGNNCC 1 cut(s) 18
BspT107I GGYRCC 1 cut(s) 16
BsrFI RCCGGY 1 cut(s) 37
BssAI RCCGGY 1 cut(s) 37
BstC8I GCNNGC 1 cut(s) 81
BstDEI CTNAG 3 cut(s) 204, 324, 330
BstF5I GGATG 1 cut(s) 169
BstMWI GCNNNNNNNGC 2 cut(s) 248, 309
Bsu36I CCTNAGG 1 cut(s) 324
BsuRI GGCC 2 cut(s) 67, 79
BtsCI GGATG 1 cut(s) 169
Cac8I GCNNGC 1 cut(s) 81
Cfr10I RCCGGY 1 cut(s) 37
Csp6I GTAC 2 cut(s) 17, 217
CviQI GTAC 2 cut(s) 17, 217
DdeI CTNAG 3 cut(s) 204, 324, 330
Ecl136II GAGCTC 1 cut(s) 208
Eco24I GRGCYC 1 cut(s) 210
Eco53kI GAGCTC 1 cut(s) 208
Eco57I CTGAAG 1 cut(s) 197
Eco81I CCTNAGG 1 cut(s) 324
EcoICRI GAGCTC 1 cut(s) 208
EcoT38I GRGCYC 1 cut(s) 210
FaiI YATR 5 cut(s) 57, 123, 159, 186, 281
FalI AAGNNNNNCTT 3 cut(s) 36, 67, 99
FokI GGATG 1 cut(s) 176
FriOI GRGCYC 1 cut(s) 210
FspBI CTAG 3 cut(s) 192, 243, 254
HaeIII GGCC 2 cut(s) 67, 79
HapII CCGG 1 cut(s) 38
HpaII CCGG 1 cut(s) 38
HphI GGTGA 4 cut(s) 92, 252, 258, 264
HpyAV CCTTC 3 cut(s) 69, 221, 239
HpyF10VI GCNNNNNNNGC 2 cut(s) 248, 309
HpyF3I CTNAG 3 cut(s) 204, 324, 330
KpnI GGTACC 1 cut(s) 20
LmnI GCTCC 1 cut(s) 213
LpnPI CCDG 6 cut(s) 10, 51, 93, 156, 311, 322
LweI GCATC 1 cut(s) 266
MaeI CTAG 3 cut(s) 192, 243, 254
MboII GAAGA 1 cut(s) 78
MhlI GDGCHC 1 cut(s) 210
MnlI CCTC 6 cut(s) 57, 139, 295, 325, 327, 333
MseI TTAA 1 cut(s) 337
MslI CAYNNNNRTG 1 cut(s) 162
MspI CCGG 1 cut(s) 38
MwoI GCNNNNNNNGC 2 cut(s) 248, 309
NlaIV GGNNCC 1 cut(s) 18
Psp124BI GAGCTC 1 cut(s) 210
PspN4I GGNNCC 1 cut(s) 18
RsaI GTAC 2 cut(s) 18, 218
RsaNI GTAC 2 cut(s) 17, 217
RseI CAYNNNNRTG 1 cut(s) 162
SacI GAGCTC 1 cut(s) 210
SaqAI TTAA 1 cut(s) 337
ScaI AGTACT 1 cut(s) 218
SduI GDGCHC 1 cut(s) 210
SetI ASST 7 cut(s) 22, 85, 150, 205, 210, 253, 325
SfaNI GCATC 1 cut(s) 266
SmiMI CAYNNNNRTG 1 cut(s) 162
SpeI ACTAGT 1 cut(s) 191
SspMI CTAG 3 cut(s) 192, 243, 254
SstI GAGCTC 1 cut(s) 210
TatI WGTACW 1 cut(s) 216
Tru1I TTAA 1 cut(s) 337
Tru9I TTAA 1 cut(s) 337
TspDTI ATGAA 1 cut(s) 116
XspI CTAG 3 cut(s) 192, 243, 254
ZrmI AGTACT 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.