Rh7CG307300

Endonuclease/Exonuclease/phosphatase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0018663
Physical Location & Seq
Forward (+)
32238333 .. 32239359
1027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG307300.1

Sequence Viewer

Length: 516 bp
ATGCTCAGAAACCTCCGCCGCCTCTGCTCCCGTCTTCGGTGGTCGTCCCGCAGCCGGTCCTGGAACAAAGTCGTCATCAAACGGTTCTGGAAAAGGAACTCCAAGTCCCAATTCGAGCACGAACCCACTTCCAACAAGTCTTCATCGGCAACGGTTCACCTTAACGGCCAGCTAGGCAGGTCGGAAACTGAGAAGTCCAGGCCTATTCGGGTCACCACTTTCAACGCTACCGGCGAGGAGGAAGAGTTGGGAGGGGGGAGTGATTGGGTGCCCCATATTTTTGAGCTTGAAAATCTTGCTCTTGAGCTCGGCTACCGGCGAGGAGGAAGAGTTGGGAGGGGGGGAGTGATTGGGTGCCCCATATTTTTGAGCTTGAAAATCTTGCTCTTGAGCTCGGCTACCGGTGAGGAGGAAGAGTTGAGTGATGAAATCTGCCTCCACGCGTCCAGATGTGGGAGCCACCGTTTCAGACCGGCGACGGACCAACGGCTCGCCATTGAAGCTGGTGAAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exo_endo_phos

Protein Analysis

171

Amino Acids

19.28

Weight (kDa)

9.5

Isoelectric Point (pI)

73.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 168
AccB1I GGYRCC 2 cut(s) 268, 354
AccII CGCG 1 cut(s) 443
AciI CCGC 3 cut(s) 16, 19, 49
AcoI YGGCCR 1 cut(s) 166
AfiI CCNNNNNNNGG 3 cut(s) 36, 54, 453
AflIII ACRYGT 1 cut(s) 441
AgeI ACCGGT 1 cut(s) 401
AgsI TTSAA 4 cut(s) 223, 290, 376, 500
AjnI CCWGG 2 cut(s) 59, 197
AjuI GAANNNNNNNTTGG 2 cut(s) 95, 127
AloI GAACNNNNNNTCC 2 cut(s) 89, 121
AluBI AGCT 6 cut(s) 172, 286, 307, 372, 393, 503
AluI AGCT 6 cut(s) 172, 286, 307, 372, 393, 503
Alw21I GWGCWC 3 cut(s) 120, 309, 395
AoxI GGCC 2 cut(s) 166, 200
ApeKI GCWGC 1 cut(s) 51
AsiGI ACCGGT 1 cut(s) 401
AspS9I GGNCC 2 cut(s) 57, 481
AsuHPI GGTGA 3 cut(s) 149, 205, 416
AvaII GGWCC 2 cut(s) 57, 481
BaeGI GKGCMC 2 cut(s) 273, 359
BanI GGYRCC 2 cut(s) 268, 354
BanII GRGCYC 2 cut(s) 309, 395
BbsI GAAGAC 2 cut(s) 26, 132
Bbv12I GWGCWC 3 cut(s) 120, 309, 395
BbvI GCAGC 1 cut(s) 63
BceAI ACGGC 2 cut(s) 181, 503
BciT130I CCWGG 2 cut(s) 61, 199
BfaI CTAG 1 cut(s) 173
BfuAI ACCTGC 1 cut(s) 168
BglI GCCNNNNNGGC 1 cut(s) 174
BisI GCNGC 2 cut(s) 19, 52
BlsI GCNGC 2 cut(s) 20, 53
Bme1390I CCNGG 2 cut(s) 61, 199
Bme18I GGWCC 2 cut(s) 57, 481
BmgT120I GGNCC 2 cut(s) 57, 481
BmiI GGNNCC 3 cut(s) 270, 356, 458
BmrFI CCNGG 2 cut(s) 61, 199
BpiI GAAGAC 2 cut(s) 26, 132
BpuEI CTTGAG 2 cut(s) 323, 409
BsaWI WCCGGW 1 cut(s) 401
BsaXI ACNNNNNCTCC 8 cut(s) 230, 260, 315, 345, 401, 431, 448, 478
Bsc4I CCNNNNNNNGG 3 cut(s) 36, 54, 453
Bse118I RCCGGY 5 cut(s) 54, 230, 315, 401, 472
BseBI CCWGG 2 cut(s) 61, 199
BseLI CCNNNNNNNGG 3 cut(s) 36, 54, 453
BseMII CTCAG 2 cut(s) 19, 180
BseRI GAGGAG 3 cut(s) 251, 336, 422
BseSI GKGCMC 2 cut(s) 273, 359
BseXI GCAGC 1 cut(s) 63
Bsh1236I CGCG 1 cut(s) 443
BshFI GGCC 2 cut(s) 168, 202
BshNI GGYRCC 2 cut(s) 268, 354
BshTI ACCGGT 1 cut(s) 401
BsiHKAI GWGCWC 3 cut(s) 120, 309, 395
BsiSI CCGG 5 cut(s) 55, 231, 316, 402, 473
BslFI GGGAC 2 cut(s) 31, 91
BslI CCNNNNNNNGG 3 cut(s) 36, 54, 453
BsmFI GGGAC 2 cut(s) 31, 91
BsnI GGCC 2 cut(s) 168, 202
Bsp1286I GDGCHC 5 cut(s) 120, 273, 309, 359, 395
BspACI CCGC 3 cut(s) 16, 19, 49
BspANI GGCC 2 cut(s) 168, 202
BspCNI CTCAG 2 cut(s) 18, 181
BspFNI CGCG 1 cut(s) 443
BspLI GGNNCC 3 cut(s) 270, 356, 458
BspMI ACCTGC 1 cut(s) 168
BspT107I GGYRCC 2 cut(s) 268, 354
BsrFI RCCGGY 5 cut(s) 54, 230, 315, 401, 472
BssAI RCCGGY 5 cut(s) 54, 230, 315, 401, 472
Bst2UI CCWGG 2 cut(s) 61, 199
Bst4CI ACNGT 3 cut(s) 84, 154, 464
Bst6I CTCTTC 3 cut(s) 237, 322, 408
BstC8I GCNNGC 2 cut(s) 170, 492
BstDEI CTNAG 2 cut(s) 5, 189
BstEII GGTNACC 1 cut(s) 211
BstFNI CGCG 1 cut(s) 443
BstMWI GCNNNNNNNGC 3 cut(s) 24, 174, 500
BstNI CCWGG 2 cut(s) 61, 199
BstPI GGTNACC 1 cut(s) 211
BstSCI CCNGG 2 cut(s) 59, 197
BstSLI GKGCMC 2 cut(s) 273, 359
BstUI CGCG 1 cut(s) 443
BstV1I GCAGC 1 cut(s) 63
BstV2I GAAGAC 2 cut(s) 26, 132
BsuRI GGCC 2 cut(s) 168, 202
BveI ACCTGC 1 cut(s) 168
Cac8I GCNNGC 2 cut(s) 170, 492
Cfr10I RCCGGY 5 cut(s) 54, 230, 315, 401, 472
Cfr13I GGNCC 2 cut(s) 57, 481
CseI GACGC 1 cut(s) 432
CspAI ACCGGT 1 cut(s) 401
DdeI CTNAG 2 cut(s) 5, 189
EaeI YGGCCR 1 cut(s) 166
Eam1104I CTCTTC 3 cut(s) 237, 322, 408
EarI CTCTTC 3 cut(s) 237, 322, 408
EciI GGCGGA 1 cut(s) 5
Ecl136II GAGCTC 2 cut(s) 307, 393
Eco147I AGGCCT 1 cut(s) 202
Eco24I GRGCYC 2 cut(s) 309, 395
Eco47I GGWCC 2 cut(s) 57, 481
Eco53kI GAGCTC 2 cut(s) 307, 393
Eco91I GGTNACC 1 cut(s) 211
EcoICRI GAGCTC 2 cut(s) 307, 393
EcoO65I GGTNACC 1 cut(s) 211
EcoRII CCWGG 2 cut(s) 59, 197
EcoT38I GRGCYC 2 cut(s) 309, 395
FaiI YATR 2 cut(s) 276, 362
FaqI GGGAC 2 cut(s) 31, 91
FauI CCCGC 1 cut(s) 56
Fnu4HI GCNGC 2 cut(s) 19, 52
FriOI GRGCYC 2 cut(s) 309, 395
Fsp4HI GCNGC 2 cut(s) 19, 52
FspBI CTAG 1 cut(s) 173
GluI GCNGC 2 cut(s) 19, 52
HaeIII GGCC 2 cut(s) 168, 202
HapII CCGG 5 cut(s) 55, 231, 316, 402, 473
HgaI GACGC 1 cut(s) 432
HpaII CCGG 5 cut(s) 55, 231, 316, 402, 473
HphI GGTGA 3 cut(s) 149, 205, 416
Hpy166II GTNNAC 1 cut(s) 157
Hpy188I TCNGA 3 cut(s) 8, 184, 470
Hpy188III TCNNGA 4 cut(s) 88, 302, 388, 447
Hpy8I GTNNAC 1 cut(s) 157
Hpy99I CGWCG 1 cut(s) 481
HpyCH4III ACNGT 3 cut(s) 84, 154, 464
HpyF10VI GCNNNNNNNGC 3 cut(s) 24, 174, 500
HpyF3I CTNAG 2 cut(s) 5, 189
LmnI GCTCC 2 cut(s) 32, 456
Lsp1109I GCAGC 1 cut(s) 63
MaeI CTAG 1 cut(s) 173
MaeIII GTNAC 1 cut(s) 211
MboII GAAGA 5 cut(s) 26, 132, 254, 339, 425
MhlI GDGCHC 5 cut(s) 120, 273, 309, 359, 395
MluCI AATT 1 cut(s) 110
MluI ACGCGT 1 cut(s) 441
MmeI TCCRAC 2 cut(s) 156, 162
MseI TTAA 1 cut(s) 162
MspI CCGG 5 cut(s) 55, 231, 316, 402, 473
MspR9I CCNGG 2 cut(s) 61, 199
MvaI CCWGG 2 cut(s) 61, 199
MvnI CGCG 1 cut(s) 443
MwoI GCNNNNNNNGC 3 cut(s) 24, 174, 500
NlaIV GGNNCC 3 cut(s) 270, 356, 458
NmeAIII GCCGAG 2 cut(s) 288, 374
NmuCI GTSAC 1 cut(s) 211
PceI AGGCCT 1 cut(s) 202
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PfoI TCCNGGA 1 cut(s) 59
PinAI ACCGGT 1 cut(s) 401
PkrI GCNGC 2 cut(s) 20, 53
Psp124BI GAGCTC 2 cut(s) 309, 395
Psp6I CCWGG 2 cut(s) 59, 197
PspEI GGTNACC 1 cut(s) 211
PspGI CCWGG 2 cut(s) 59, 197
PspN4I GGNNCC 3 cut(s) 270, 356, 458
PspPI GGNCC 2 cut(s) 57, 481
SacI GAGCTC 2 cut(s) 309, 395
SaqAI TTAA 1 cut(s) 162
SatI GCNGC 2 cut(s) 19, 52
Sau96I GGNCC 2 cut(s) 57, 481
ScrFI CCNGG 2 cut(s) 61, 199
SduI GDGCHC 5 cut(s) 120, 273, 309, 359, 395
SetI ASST 9 cut(s) 15, 162, 174, 182, 288, 309, 374, 395, 505
SinI GGWCC 2 cut(s) 57, 481
SmlI CTYRAG 2 cut(s) 302, 388
SmoI CTYRAG 2 cut(s) 302, 388
Sse9I AATT 1 cut(s) 110
SseBI AGGCCT 1 cut(s) 202
SsiI CCGC 3 cut(s) 16, 19, 49
SspMI CTAG 1 cut(s) 173
SstI GAGCTC 2 cut(s) 309, 395
StuI AGGCCT 1 cut(s) 202
StyD4I CCNGG 2 cut(s) 59, 197
TaaI ACNGT 3 cut(s) 84, 154, 464
TaqI TCGA 1 cut(s) 114
TasI AATT 1 cut(s) 110
TauI GCSGC 1 cut(s) 21
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
TseFI GTSAC 1 cut(s) 211
TseI GCWGC 1 cut(s) 51
Tsp45I GTSAC 1 cut(s) 211
TspDTI ATGAA 2 cut(s) 132, 441
TspGWI ACGGA 1 cut(s) 494
VpaK11BI GGWCC 2 cut(s) 57, 481
XspI CTAG 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.