Rh7CG483300

TBCC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0005065
Physical Location & Seq
Forward (+)
64985976 .. 64986527
552 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG483300.1

Sequence Viewer

Length: 552 bp
ATGTCGTCATCCCCCGTCGTCGAGCACATCGTCCTCTTCAAGGTCAAAGACGACATTGACCCCTCCAAGGTCAACGACCTCACCTCCCTCTGTCTCACCCTCCACCGCTCCGCCGATCCCCTCTTCCGCACCCGATCTTCCCTCTTCGCCTTCAGTCACCGGGTCAACGCCGCAGCGATCTCCGAGTCACTGCAAATCTCCATTGATTTCGCGCGGCTCGTCCTCGATACCTTAGCGTCGGTTCTTCATTTAGAGTCGAACCCACTCGTCCAGGCCAAGCCCGACGTCATTGATGAAGTTGGAGTCTATGTGCATGATCTGGTTTTGTTCCTCCACATTCAATCCTACAAGAAATTGTTGCCCAGAAAGCACAAGGATTCAGCAGCAGTTGCCGATGTTTGGCTCTCCACCTCAGCTTTCGACGGATATTTGTTGGCTTTGTCAGGGTTGCAGGTGATGATTTGTGCCGGAATTGATTGCTTCTTTTTCTTTGGGGTGGTGGATTGTGCAATGTTGCTGTGCTTAATTGGACTGGTGAATTTGGGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TBCC

Protein Analysis

183

Amino Acids

20.12

Weight (kDa)

5.92

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 442
AatII GACGTC 1 cut(s) 288
Acc36I ACCTGC 1 cut(s) 442
AccBSI CCGCTC 1 cut(s) 108
AccII CGCG 2 cut(s) 212, 214
AciI CCGC 5 cut(s) 106, 111, 127, 171, 214
AclWI GGATC 1 cut(s) 110
AcsI RAATTY 1 cut(s) 538
AcuI CTGAAG 1 cut(s) 136
AcyI GRCGYC 1 cut(s) 285
AfiI CCNNNNNNNGG 3 cut(s) 40, 67, 399
AgsI TTSAA 2 cut(s) 40, 341
AjnI CCWGG 1 cut(s) 270
AluBI AGCT 1 cut(s) 416
AluI AGCT 1 cut(s) 416
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 1 cut(s) 98
AlwI GGATC 1 cut(s) 110
AoxI GGCC 1 cut(s) 273
ApeKI GCWGC 2 cut(s) 173, 383
ApoI RAATTY 1 cut(s) 538
AspLEI GCGC 1 cut(s) 214
AsuC2I CCSGG 1 cut(s) 161
AsuHPI GGTGA 5 cut(s) 73, 88, 149, 466, 547
Bbv12I GWGCWC 1 cut(s) 27
BbvCI CCTCAGC 1 cut(s) 412
BbvI GCAGC 2 cut(s) 185, 395
BciT130I CCWGG 1 cut(s) 272
BcnI CCSGG 1 cut(s) 161
BcoDI GTCTC 1 cut(s) 98
BfuAI ACCTGC 1 cut(s) 442
BisI GCNGC 4 cut(s) 171, 174, 215, 384
BlsI GCNGC 4 cut(s) 172, 175, 216, 385
Bme1390I CCNGG 2 cut(s) 161, 272
BmrFI CCNGG 2 cut(s) 161, 272
Bpu10I CCTNAGC 2 cut(s) 232, 412
BpuMI CCSGG 1 cut(s) 161
BsaHI GRCGYC 1 cut(s) 285
BsaJI CCNNGG 1 cut(s) 66
BsaXI ACNNNNNCTCC 4 cut(s) 68, 98, 294, 324
Bsc4I CCNNNNNNNGG 3 cut(s) 40, 67, 399
Bse1I ACTGG 1 cut(s) 537
Bse3DI GCAATG 1 cut(s) 516
BseBI CCWGG 1 cut(s) 272
BseDI CCNNGG 1 cut(s) 66
BseGI GGATG 1 cut(s) 8
BseLI CCNNNNNNNGG 3 cut(s) 40, 67, 399
BseMI GCAATG 1 cut(s) 516
BseMII CTCAG 1 cut(s) 426
BseNI ACTGG 1 cut(s) 537
BseXI GCAGC 2 cut(s) 185, 395
Bsh1236I CGCG 2 cut(s) 212, 214
BshFI GGCC 1 cut(s) 275
BsiHKAI GWGCWC 1 cut(s) 27
BsiSI CCGG 2 cut(s) 160, 468
BslI CCNNNNNNNGG 3 cut(s) 40, 67, 399
BsmAI GTCTC 1 cut(s) 98
BsnI GGCC 1 cut(s) 275
Bsp1286I GDGCHC 1 cut(s) 27
Bsp143I GATC 4 cut(s) 115, 134, 177, 316
BspACI CCGC 5 cut(s) 106, 111, 127, 171, 214
BspANI GGCC 1 cut(s) 275
BspCNI CTCAG 1 cut(s) 425
BspFNI CGCG 2 cut(s) 212, 214
BspMI ACCTGC 1 cut(s) 442
BspPI GGATC 1 cut(s) 110
BsrBI CCGCTC 1 cut(s) 108
BsrDI GCAATG 1 cut(s) 516
BsrI ACTGG 1 cut(s) 537
BssECI CCNNGG 1 cut(s) 66
BssMI GATC 4 cut(s) 115, 134, 177, 316
BssNI GRCGYC 1 cut(s) 285
BssT1I CCWWGG 1 cut(s) 66
Bst2UI CCWGG 1 cut(s) 272
Bst6I CTCTTC 3 cut(s) 41, 128, 149
BstACI GRCGYC 1 cut(s) 285
BstAPI GCANNNNNTGC 1 cut(s) 389
BstDEI CTNAG 2 cut(s) 232, 412
BstENI CCTNNNNNAGG 1 cut(s) 38
BstF5I GGATG 1 cut(s) 8
BstFNI CGCG 2 cut(s) 212, 214
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 4 cut(s) 118, 137, 180, 319
BstMAI GTCTC 1 cut(s) 98
BstMBI GATC 4 cut(s) 115, 134, 177, 316
BstMWI GCNNNNNNNGC 2 cut(s) 367, 389
BstNI CCWGG 1 cut(s) 272
BstSCI CCNGG 2 cut(s) 159, 270
BstUI CGCG 2 cut(s) 212, 214
BstV1I GCAGC 2 cut(s) 185, 395
BsuRI GGCC 1 cut(s) 275
BtsCI GGATG 1 cut(s) 8
BtsI GCAGTG 1 cut(s) 188
BtsIMutI CAGTG 1 cut(s) 188
BveI ACCTGC 1 cut(s) 442
CfoI GCGC 1 cut(s) 214
CseI GACGC 1 cut(s) 225
CviAII CATG 1 cut(s) 314
CviJI RGCY 6 cut(s) 217, 275, 280, 403, 416, 437
CviKI_1 RGCY 6 cut(s) 217, 275, 280, 403, 416, 437
DdeI CTNAG 2 cut(s) 232, 412
DpnI GATC 4 cut(s) 117, 136, 179, 318
DpnII GATC 4 cut(s) 115, 134, 177, 316
Eam1104I CTCTTC 3 cut(s) 41, 128, 149
EarI CTCTTC 3 cut(s) 41, 128, 149
EciI GGCGGA 1 cut(s) 100
Eco130I CCWWGG 1 cut(s) 66
Eco57I CTGAAG 1 cut(s) 136
EcoNI CCTNNNNNAGG 1 cut(s) 38
EcoRII CCWGG 1 cut(s) 270
EcoT14I CCWWGG 1 cut(s) 66
ErhI CCWWGG 1 cut(s) 66
FaeI CATG 1 cut(s) 317
FaiI YATR 2 cut(s) 309, 315
FatI CATG 1 cut(s) 313
Fnu4HI GCNGC 4 cut(s) 171, 174, 215, 384
Fsp4HI GCNGC 4 cut(s) 171, 174, 215, 384
GlaI GCGC 1 cut(s) 213
GluI GCNGC 4 cut(s) 171, 174, 215, 384
HaeIII GGCC 1 cut(s) 275
HapII CCGG 2 cut(s) 160, 468
HgaI GACGC 1 cut(s) 225
HhaI GCGC 1 cut(s) 214
Hin1I GRCGYC 1 cut(s) 285
Hin1II CATG 1 cut(s) 317
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HincII GTYRAC 2 cut(s) 73, 166
HindII GTYRAC 2 cut(s) 73, 166
HinfI GANTC 4 cut(s) 185, 254, 303, 377
HpaII CCGG 2 cut(s) 160, 468
HphI GGTGA 5 cut(s) 73, 88, 149, 466, 547
Hpy166II GTNNAC 2 cut(s) 73, 166
Hpy188I TCNGA 1 cut(s) 184
Hpy8I GTNNAC 2 cut(s) 73, 166
Hpy99I CGWCG 5 cut(s) 20, 23, 241, 287, 425
HpyAV CCTTC 1 cut(s) 160
HpyCH4IV ACGT 1 cut(s) 285
HpyCH4V TGCA 4 cut(s) 193, 313, 451, 509
HpyF10VI GCNNNNNNNGC 2 cut(s) 367, 389
HpyF3I CTNAG 2 cut(s) 232, 412
HpySE526I ACGT 1 cut(s) 285
Hsp92I GRCGYC 1 cut(s) 285
Hsp92II CATG 1 cut(s) 317
HspAI GCGC 1 cut(s) 212
Kzo9I GATC 4 cut(s) 115, 134, 177, 316
LmnI GCTCC 1 cut(s) 113
LpnPI CCDG 9 cut(s) 173, 257, 284, 305, 376, 429, 437, 481, 518
Lsp1109I GCAGC 2 cut(s) 185, 395
MaeII ACGT 1 cut(s) 285
MaeIII GTNAC 2 cut(s) 155, 186
MalI GATC 4 cut(s) 117, 136, 179, 318
MbiI CCGCTC 1 cut(s) 108
MboI GATC 4 cut(s) 115, 134, 177, 316
MboII GAAGA 5 cut(s) 28, 115, 129, 136, 236
MhlI GDGCHC 1 cut(s) 27
MluCI AATT 4 cut(s) 353, 471, 525, 538
MlyI GAGTC 3 cut(s) 194, 263, 312
MmeI TCCRAC 1 cut(s) 280
MseI TTAA 1 cut(s) 524
MspI CCGG 2 cut(s) 160, 468
MspR9I CCNGG 2 cut(s) 161, 272
MvaI CCWGG 1 cut(s) 272
MvnI CGCG 2 cut(s) 212, 214
MwoI GCNNNNNNNGC 2 cut(s) 367, 389
NciI CCSGG 1 cut(s) 161
NdeII GATC 4 cut(s) 115, 134, 177, 316
NlaIII CATG 1 cut(s) 317
NmuCI GTSAC 2 cut(s) 155, 186
PaqCI CACCTGC 1 cut(s) 442
PcsI WCGNNNNNNNCGW 2 cut(s) 27, 216
PfeI GAWTC 1 cut(s) 377
PkrI GCNGC 4 cut(s) 172, 175, 216, 385
PleI GAGTC 3 cut(s) 193, 262, 311
PpsI GAGTC 3 cut(s) 193, 262, 311
Psp6I CCWGG 1 cut(s) 270
PspGI CCWGG 1 cut(s) 270
SaqAI TTAA 1 cut(s) 524
SatI GCNGC 4 cut(s) 171, 174, 215, 384
Sau3AI GATC 4 cut(s) 115, 134, 177, 316
SchI GAGTC 3 cut(s) 194, 263, 312
ScrFI CCNGG 2 cut(s) 161, 272
SduI GDGCHC 1 cut(s) 27
SetI ASST 9 cut(s) 45, 72, 81, 86, 233, 288, 413, 418, 456
Sse9I AATT 4 cut(s) 353, 471, 525, 538
SsiI CCGC 5 cut(s) 106, 111, 127, 171, 214
StyD4I CCNGG 2 cut(s) 159, 270
StyI CCWWGG 1 cut(s) 66
TaiI ACGT 1 cut(s) 288
TaqI TCGA 4 cut(s) 21, 225, 257, 420
TasI AATT 4 cut(s) 353, 471, 525, 538
TauI GCSGC 2 cut(s) 173, 217
TfiI GAWTC 1 cut(s) 377
Tru1I TTAA 1 cut(s) 524
Tru9I TTAA 1 cut(s) 524
TscAI CASTG 1 cut(s) 195
TseFI GTSAC 2 cut(s) 155, 186
TseI GCWGC 2 cut(s) 173, 383
Tsp45I GTSAC 2 cut(s) 155, 186
TspDTI ATGAA 2 cut(s) 236, 309
TspGWI ACGGA 1 cut(s) 438
TspRI CASTG 1 cut(s) 195
XagI CCTNNNNNAGG 1 cut(s) 38
XapI RAATTY 1 cut(s) 538
ZraI GACGTC 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.