WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000020140 |
| rosa_multiflora | Rmu_sc0009528.1_g000016 Rmu_sc0034455.1_g000001 |
| rosa_rugosa | Rorug02G0438900 |
| rosa_samantha | Rh1BG083400 Rh2AG392200 Rh2CG378900 Rh4BG035800 Rh5CG329500 Rh7BG076400 Rh7DG079700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 131, 258, 323 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AgsI | TTSAA | 1 cut(s) | 250 |
| AluBI | AGCT | 1 cut(s) | 317 |
| AluI | AGCT | 1 cut(s) | 317 |
| Alw26I | GTCTC | 2 cut(s) | 155, 224 |
| AoxI | GGCC | 2 cut(s) | 3, 243 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BauI | CACGAG | 1 cut(s) | 29 |
| BbsI | GAAGAC | 1 cut(s) | 282 |
| BbvCI | CCTCAGC | 1 cut(s) | 207 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 302, 336 |
| BcoDI | GTCTC | 2 cut(s) | 155, 224 |
| BisI | GCNGC | 1 cut(s) | 324 |
| BlpI | GCTNAGC | 1 cut(s) | 122 |
| BlsI | GCNGC | 1 cut(s) | 325 |
| BmsI | GCATC | 3 cut(s) | 81, 189, 364 |
| BpiI | GAAGAC | 1 cut(s) | 282 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 85, 117 |
| Bpu10I | CCTNAGC | 1 cut(s) | 207 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 122 |
| BsaI | GGTCTC | 1 cut(s) | 155 |
| Bse3DI | GCAATG | 1 cut(s) | 133 |
| BseMI | GCAATG | 1 cut(s) | 133 |
| BseMII | CTCAG | 2 cut(s) | 136, 221 |
| BseRI | GAGGAG | 2 cut(s) | 135, 353 |
| BshFI | GGCC | 2 cut(s) | 5, 245 |
| BsiSI | CCGG | 1 cut(s) | 69 |
| BslFI | GGGAC | 1 cut(s) | 149 |
| BsmAI | GTCTC | 2 cut(s) | 155, 224 |
| BsmFI | GGGAC | 1 cut(s) | 149 |
| BsnI | GGCC | 2 cut(s) | 5, 245 |
| Bso31I | GGTCTC | 1 cut(s) | 155 |
| Bsp143I | GATC | 2 cut(s) | 25, 294 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 122 |
| BspACI | CCGC | 3 cut(s) | 131, 258, 323 |
| BspANI | GGCC | 2 cut(s) | 5, 245 |
| BspCNI | CTCAG | 2 cut(s) | 135, 220 |
| BspTNI | GGTCTC | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 133 |
| BssMI | GATC | 2 cut(s) | 25, 294 |
| BssSI | CACGAG | 1 cut(s) | 29 |
| Bst2BI | CACGAG | 1 cut(s) | 29 |
| Bst6I | CTCTTC | 2 cut(s) | 64, 218 |
| BstDEI | CTNAG | 3 cut(s) | 90, 122, 207 |
| BstKTI | GATC | 2 cut(s) | 28, 297 |
| BstMAI | GTCTC | 2 cut(s) | 155, 224 |
| BstMBI | GATC | 2 cut(s) | 25, 294 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 208, 217, 266, 323 |
| BstV2I | GAAGAC | 1 cut(s) | 282 |
| BsuRI | GGCC | 2 cut(s) | 5, 245 |
| CviAII | CATG | 2 cut(s) | 112, 320 |
| CviJI | RGCY | 3 cut(s) | 5, 245, 317 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 245, 317 |
| DdeI | CTNAG | 3 cut(s) | 90, 122, 207 |
| DpnI | GATC | 2 cut(s) | 27, 296 |
| DpnII | GATC | 2 cut(s) | 25, 294 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 64, 218 |
| EarI | CTCTTC | 2 cut(s) | 64, 218 |
| Eco147I | AGGCCT | 1 cut(s) | 245 |
| Eco31I | GGTCTC | 1 cut(s) | 155 |
| FaeI | CATG | 2 cut(s) | 115, 323 |
| FaiI | YATR | 4 cut(s) | 113, 321, 361, 363 |
| FaqI | GGGAC | 1 cut(s) | 149 |
| FatI | CATG | 2 cut(s) | 111, 319 |
| FauI | CCCGC | 1 cut(s) | 124 |
| FauNDI | CATATG | 1 cut(s) | 361 |
| Fnu4HI | GCNGC | 1 cut(s) | 324 |
| Fsp4HI | GCNGC | 1 cut(s) | 324 |
| GluI | GCNGC | 1 cut(s) | 324 |
| HaeIII | GGCC | 2 cut(s) | 5, 245 |
| HapII | CCGG | 1 cut(s) | 69 |
| Hin1II | CATG | 2 cut(s) | 115, 323 |
| HinfI | GANTC | 3 cut(s) | 34, 80, 98 |
| HpaII | CCGG | 1 cut(s) | 69 |
| Hpy188I | TCNGA | 2 cut(s) | 25, 39 |
| Hpy188III | TCNNGA | 3 cut(s) | 29, 160, 349 |
| Hpy99I | CGWCG | 2 cut(s) | 175, 220 |
| HpyAV | CCTTC | 1 cut(s) | 64 |
| HpyCH4IV | ACGT | 1 cut(s) | 173 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 208, 217, 266, 323 |
| HpyF3I | CTNAG | 3 cut(s) | 90, 122, 207 |
| HpySE526I | ACGT | 1 cut(s) | 173 |
| Hsp92II | CATG | 2 cut(s) | 115, 323 |
| Kzo9I | GATC | 2 cut(s) | 25, 294 |
| LmnI | GCTCC | 2 cut(s) | 148, 340 |
| LpnPI | CCDG | 1 cut(s) | 82 |
| LweI | GCATC | 3 cut(s) | 81, 189, 364 |
| MaeII | ACGT | 1 cut(s) | 173 |
| MalI | GATC | 2 cut(s) | 27, 296 |
| MboI | GATC | 2 cut(s) | 25, 294 |
| MboII | GAAGA | 6 cut(s) | 51, 67, 235, 282, 380, 383 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 74 |
| MnlI | CCTC | 6 cut(s) | 87, 156, 216, 235, 331, 358 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 11 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 1 cut(s) | 69 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 208, 217, 266, 323 |
| NdeI | CATATG | 1 cut(s) | 361 |
| NdeII | GATC | 2 cut(s) | 25, 294 |
| NlaIII | CATG | 2 cut(s) | 115, 323 |
| PceI | AGGCCT | 1 cut(s) | 245 |
| PfeI | GAWTC | 2 cut(s) | 34, 98 |
| PflFI | GACNNNGTC | 1 cut(s) | 175 |
| PkrI | GCNGC | 1 cut(s) | 325 |
| PleI | GAGTC | 1 cut(s) | 74 |
| PpsI | GAGTC | 1 cut(s) | 74 |
| PsyI | GACNNNGTC | 1 cut(s) | 175 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| SatI | GCNGC | 1 cut(s) | 324 |
| Sau3AI | GATC | 2 cut(s) | 25, 294 |
| SchI | GAGTC | 1 cut(s) | 74 |
| SetI | ASST | 5 cut(s) | 56, 91, 176, 208, 319 |
| SfaNI | GCATC | 3 cut(s) | 81, 189, 364 |
| SseBI | AGGCCT | 1 cut(s) | 245 |
| SsiI | CCGC | 3 cut(s) | 131, 258, 323 |
| StuI | AGGCCT | 1 cut(s) | 245 |
| TaiI | ACGT | 1 cut(s) | 176 |
| TaqI | TCGA | 4 cut(s) | 78, 159, 240, 293 |
| TauI | GCSGC | 1 cut(s) | 326 |
| TfiI | GAWTC | 2 cut(s) | 34, 98 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TspDTI | ATGAA | 1 cut(s) | 100 |
| Tth111I | GACNNNGTC | 1 cut(s) | 175 |