Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0009286

Physical Location & Seq

Genomic Coordinates Forward (+)

47481067 .. 47487240

Gene Structure 6174 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG356400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGTCTTTCGTGTTCACAAATGCTTTAAAAGGCTCCGCTTCCTACCCACTACTGCAAACTCTTCTGCATTTTTCCATACCTCCTTTCAGAGTTGCTCATCTGCTCTGTCTTCTCCACTGGGGTCGGCGCAGCGATTGGAAGACCCTACAAGACTATCAGACCTTGACATTATCATATCTACAGTTCCTGTTGGAAGTACTGATGATCAAGTACTTTTGTCTCTTTCACATGATCAAGCATGTAATAGCATTCAGCTCACACGTGTCCTTGTTCATCAATTGTTCCATCGATTTAAGAATGATTGGAAGTCGGCACTGGGTGTGTTTAGATGGGCTGAGTCACGACCTGGCTATAAACTCCCCCCAGATGCGTATGATATGATCATCGACGTTTTAGGTAAAATGAGGCAGATGGATCAGACCATGCATTTGTTAGAAAGAATGCATCAGGATCGTCTGGTAACACTCAACACTGTAGGTAAGGTTATGAGAAGATTCGCTGGTGCGGGGAAATGGGAGGATGCTGTGAGGATATTTGATGGGTTAGGAAGATTTGGATTAGACAAGAACACAGAATCAATGAACTTGTTGCTTGACACACTCTGCAAAGAGAACAAAGTTGAGGTCGCCCGCGATATCTTTTTAGAACTAAAATCACACATCTCCCCAAATGCTCATACGTTTAACATTTTCATTCACGGCTGGTGCAAGGTCAATCGGGTTGATGAGGCGCACTGGACAATCCAAGAAATGAAGGGTCATGGCTGTCGCCCCTGTGCCATTAGCTATTCAACCATTATCCTCTTTTATTGCCACAAGTACAACTTTGGTAAGGTCTATGAACTGTTTGATGAAATGGAAGCTCAAGGCTGCCCTCCAAATGTTGTCACTTTCACCACTGTTATGTGTTATCTTGCAAAGTCTGAGGAATTCGAGGAAGCTATGCAATTATATGAGAGAATGAAATCAGCTGGATGTAAACCTGATACCCTGTTCTACAACTCACTGATCCACACACTAGGAAGAGCTGGACGAGTACGTGAAGCTATTCATGTTTTTGAGGTTGAGATGCCTGAGAATGAGGTTCCTCACAATACATCAACTTACAATACGATGATTGCCATGTTTTGCAATAATGCTCAGGAGGAGGAAGCCTTGAAAATCCTCCGGAAGATGGAAAGTTCAGGGCTCTGTAAGCCTGATGTTCAGACATACTATCCGTTGCTTAAAATGTGCTTCAAAACTGGCAAAACAGACAATTGTTTGAATGAGTTAGTGAATGACATGGTCAATGGACATCATCTCAGTCTTGATCTCTCAACATATACACTTCTAATTCACGGTCTATGCAGAGCAGGTAAATGTGAGTGGGCTTACAGTCTGTTCAAAGAGATGATTGCTCAAGAGATGAAGCCTAGATATAAGACATGTCGTTTGCTTTGGGATGAAGTCAAACTGAAGAATATGTCTGCAGCTGCTGACAGCATTGCAGATTTCATGAAGAAGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

503

Amino Acids

57.7

Weight (kDa)

7.54

Isoelectric Point (pI)

33.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	190 - 237	5.5e-10	PPR repeat family
PPR_1	PF12854	221 - 245	1.7e-07	PPR repeat
PPR_2	PF13041	223 - 267	3.6e-09	PPR repeat family
PPR_2	PF13041	258 - 307	3.4e-11	PPR repeat family
PPR_long	PF17177	276 - 353	9.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	282 - 341	2.3e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	290 - 322	9.4e-06	PPR repeat
PPR_2	PF13041	293 - 330	7.8e-11	PPR repeat family
PPR_long	PF17177	306 - 477	3.4e-13	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	325 - 354	6.8e-08	PPR repeat
PPR_2	PF13041	328 - 378	5.9e-10	PPR repeat family
TPR_24	PF23276	336 - 465	1.1e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	356 - 412	5.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	365 - 414	3.2e-10	PPR repeat family
PPR	PF01535	367 - 397	2.7e-06	PPR repeat
PPR_1	PF12854	435 - 465	1.7e-09	PPR repeat
PPR_2	PF13041	438 - 472	9.8e-06	PPR repeat family
PPR	PF01535	440 - 466	1.3e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04130 AT3G04130
fragaria_vesca	FvH4_4g36630 FvH4_5g29890 FvH4_5g29890
malus_domestica	MD17G1227800.v1.1 MD17G1228100.v1.1
prunus_persica	Prupe.3G105000_v2.0.a1 Prupe.3G105000_v2.0.a1
pyrus_communis	pycom17g23070
rosa_chinensis	RchiOBHm_Chr7g0223501
rosa_laevigata	RLG00000001960
rosa_multiflora	Rmu_sc0002224.1_g000003
rosa_roxburghii	Rroxscaffold_3G00235660
rosa_rugosa	Rorug07G0217700 Rorug07G0217700 Rorug07G0217700
rosa_samantha	Rh7AG361100 Rh7BG351600 Rh7CG379600 Rh7DG356400
rosa_wichuraiana	Rw7G030690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1346
AccII	CGCG	1 cut(s)	633
AccIII	TCCGGA	1 cut(s)	1167
AciI	CCGC	3 cut(s)	37, 506, 631
AclWI	GGATC	3 cut(s)	423, 459, 1003
AcsI	RAATTY	1 cut(s)	929
AcuI	CTGAAG	1 cut(s)	1478
AcvI	CACGTG	1 cut(s)	263
AdeI	CACNNNGTG	1 cut(s)	320
AfaI	GTAC	4 cut(s)	199, 213, 821, 1038
AfiI	CCNNNNNNNGG	1 cut(s)	1174
AflIII	ACRYGT	3 cut(s)	260, 262, 1427
AgsI	TTSAA	5 cut(s)	792, 1159, 1240, 1267, 1387
AjnI	CCWGG	1 cut(s)	346
AluBI	AGCT	9 cut(s)	256, 786, 863, 941, 971, 1028, 1046, 1475, 1507
AluI	AGCT	9 cut(s)	256, 786, 863, 941, 971, 1028, 1046, 1475, 1507
Alw26I	GTCTC	1 cut(s)	225
AlwI	GGATC	3 cut(s)	423, 459, 1003
AlwNI	CAGNNNCTG	2 cut(s)	188, 1478
Aor13HI	TCCGGA	1 cut(s)	1167
ApeKI	GCWGC	4 cut(s)	130, 870, 1472, 1475
ApoI	RAATTY	1 cut(s)	929
ArsI	GACNNNNNNTTYG	6 cut(s)	412, 444, 609, 641, 1417, 1449
Asp700I	GAANNNNTTC	1 cut(s)	1047
AspLEI	GCGC	2 cut(s)	130, 733
AsuHPI	GGTGA	1 cut(s)	886
BanII	GRGCYC	1 cut(s)	1191
BbrPI	CACGTG	1 cut(s)	263
BbsI	GAAGAC	2 cut(s)	102, 147
BbvI	GCAGC	4 cut(s)	142, 857, 1462, 1484
BccI	CCATC	5 cut(s)	294, 324, 406, 533, 1168
BceAI	ACGGC	1 cut(s)	715
BcgI	CGANNNNNNTGC	2 cut(s)	434, 468
BciT130I	CCWGG	1 cut(s)	348
BclI	TGATCA	3 cut(s)	205, 232, 381
BcoDI	GTCTC	1 cut(s)	225
BfaI	CTAG	2 cut(s)	1019, 1416
BfmI	CTRYAG	3 cut(s)	180, 474, 1470
BfuAI	ACCTGC	1 cut(s)	1346
BisI	GCNGC	4 cut(s)	131, 871, 1473, 1476
BlsI	GCNGC	4 cut(s)	132, 872, 1474, 1477
BmcAI	AGTACT	2 cut(s)	199, 213
Bme1390I	CCNGG	1 cut(s)	348
BmiI	GGNNCC	2 cut(s)	35, 1086
BmrFI	CCNGG	1 cut(s)	348
BmrI	ACTGGG	2 cut(s)	128, 326
BmsI	GCATC	4 cut(s)	358, 454, 511, 1059
BmuI	ACTGGG	2 cut(s)	128, 326
BpiI	GAAGAC	2 cut(s)	102, 147
Bpu10I	CCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	2 cut(s)	849, 1386
Bsa29I	ATCGAT	1 cut(s)	289
BsaAI	YACGTR	2 cut(s)	263, 1040
BsaWI	WCCGGW	1 cut(s)	1167
Bsc4I	CCNNNNNNNGG	1 cut(s)	1174
Bse1I	ACTGG	4 cut(s)	123, 321, 740, 1249
Bse3DI	GCAATG	1 cut(s)	1485
BseAI	TCCGGA	1 cut(s)	1167
BseBI	CCWGG	1 cut(s)	348
BseCI	ATCGAT	1 cut(s)	289
BseGI	GGATG	3 cut(s)	526, 980, 1450
BseLI	CCNNNNNNNGG	1 cut(s)	1174
BseMI	GCAATG	1 cut(s)	1485
BseMII	CTCAG	5 cut(s)	327, 915, 1065, 1154, 1318
BseNI	ACTGG	4 cut(s)	123, 321, 740, 1249
BseRI	GAGGAG	1 cut(s)	1160
BseXI	GCAGC	4 cut(s)	142, 857, 1462, 1484
Bsh1236I	CGCG	1 cut(s)	633
BshVI	ATCGAT	1 cut(s)	289
BsiSI	CCGG	1 cut(s)	1168
BslI	CCNNNNNNNGG	1 cut(s)	1174
BsmAI	GTCTC	1 cut(s)	225
BsmI	GAATGC	2 cut(s)	249, 447
Bsp1286I	GDGCHC	1 cut(s)	1191
Bsp13I	TCCGGA	1 cut(s)	1167
Bsp143I	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
BspACI	CCGC	3 cut(s)	37, 506, 631
BspCNI	CTCAG	5 cut(s)	328, 916, 1066, 1153, 1317
BspDI	ATCGAT	1 cut(s)	289
BspEI	TCCGGA	1 cut(s)	1167
BspFNI	CGCG	1 cut(s)	633
BspHI	TCATGA	1 cut(s)	1497
BspLI	GGNNCC	2 cut(s)	35, 1086
BspMAI	CTGCAG	1 cut(s)	1474
BspMI	ACCTGC	1 cut(s)	1346
BspPI	GGATC	3 cut(s)	423, 459, 1003
BspQI	GCTCTTC	1 cut(s)	1018
BsrDI	GCAATG	1 cut(s)	1485
BsrI	ACTGG	4 cut(s)	123, 321, 740, 1249
BssMI	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
Bst2UI	CCWGG	1 cut(s)	348
Bst4CI	ACNGT	6 cut(s)	184, 475, 846, 901, 1343, 1379
Bst6I	CTCTTC	2 cut(s)	67, 1018
BstBAI	YACGTR	2 cut(s)	263, 1040
BstC8I	GCNNGC	1 cut(s)	631
BstDEI	CTNAG	5 cut(s)	336, 924, 1074, 1140, 1304
BstF5I	GGATG	3 cut(s)	526, 980, 1450
BstFNI	CGCG	1 cut(s)	633
BstHHI	GCGC	2 cut(s)	130, 733
BstKTI	GATC	7 cut(s)	208, 235, 384, 418, 454, 1011, 1315
BstMAI	GTCTC	1 cut(s)	225
BstMBI	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
BstMWI	GCNNNNNNNGC	1 cut(s)	1195
BstNI	CCWGG	1 cut(s)	348
BstNSI	RCATGY	2 cut(s)	243, 1431
BstSCI	CCNGG	1 cut(s)	346
BstSFI	CTRYAG	3 cut(s)	180, 474, 1470
BstUI	CGCG	1 cut(s)	633
BstV1I	GCAGC	4 cut(s)	142, 857, 1462, 1484
BstV2I	GAAGAC	2 cut(s)	102, 147
Bsu15I	ATCGAT	1 cut(s)	289
BsuTUI	ATCGAT	1 cut(s)	289
BtsCI	GGATG	3 cut(s)	526, 980, 1450
BtsIMutI	CAGTG	6 cut(s)	116, 314, 471, 733, 897, 1004
BveI	ACCTGC	1 cut(s)	1346
Cac8I	GCNNGC	1 cut(s)	631
CaiI	CAGNNNCTG	2 cut(s)	188, 1478
CciI	TCATGA	1 cut(s)	1497
CfoI	GCGC	2 cut(s)	130, 733
ClaI	ATCGAT	1 cut(s)	289
Csp6I	GTAC	4 cut(s)	198, 212, 820, 1037
CviAII	CATG	9 cut(s)	230, 240, 424, 761, 1052, 1123, 1285, 1428, 1498
CviQI	GTAC	4 cut(s)	198, 212, 820, 1037
DdeI	CTNAG	5 cut(s)	336, 924, 1074, 1140, 1304
DpnI	GATC	7 cut(s)	207, 234, 383, 417, 453, 1010, 1314
DpnII	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
DraI	TTTAAA	1 cut(s)	28
DraIII	CACNNNGTG	1 cut(s)	320
Eam1104I	CTCTTC	2 cut(s)	67, 1018
EarI	CTCTTC	2 cut(s)	67, 1018
Eco24I	GRGCYC	1 cut(s)	1191
Eco32I	GATATC	1 cut(s)	637
Eco57I	CTGAAG	1 cut(s)	1478
Eco72I	CACGTG	1 cut(s)	263
EcoRI	GAATTC	1 cut(s)	929
EcoRII	CCWGG	1 cut(s)	346
EcoRV	GATATC	1 cut(s)	637
EcoT22I	ATGCAT	2 cut(s)	429, 447
EcoT38I	GRGCYC	1 cut(s)	1191
FaeI	CATG	9 cut(s)	233, 243, 427, 764, 1055, 1126, 1288, 1431, 1501
FalI	AAGNNNNNCTT	2 cut(s)	809, 841
FatI	CATG	9 cut(s)	229, 239, 423, 760, 1051, 1122, 1284, 1427, 1497
FauI	CCCGC	2 cut(s)	499, 638
FbaI	TGATCA	3 cut(s)	205, 232, 381
Fnu4HI	GCNGC	4 cut(s)	131, 871, 1473, 1476
FokI	GGATG	3 cut(s)	533, 987, 1457
FriOI	GRGCYC	1 cut(s)	1191
Fsp4HI	GCNGC	4 cut(s)	131, 871, 1473, 1476
FspBI	CTAG	2 cut(s)	1019, 1416
GlaI	GCGC	2 cut(s)	129, 732
GluI	GCNGC	4 cut(s)	131, 871, 1473, 1476
HapII	CCGG	1 cut(s)	1168
HhaI	GCGC	2 cut(s)	130, 733
Hin1II	CATG	9 cut(s)	233, 243, 427, 764, 1055, 1126, 1288, 1431, 1501
Hin6I	GCGC	2 cut(s)	128, 731
HinP1I	GCGC	2 cut(s)	128, 731
HinfI	GANTC	3 cut(s)	338, 495, 575
HpaII	CCGG	1 cut(s)	1168
HphI	GGTGA	1 cut(s)	886
Hpy166II	GTNNAC	2 cut(s)	16, 980
Hpy188I	TCNGA	5 cut(s)	90, 160, 420, 925, 1209
Hpy188III	TCNNGA	7 cut(s)	342, 449, 1142, 1168, 1310, 1403, 1498
Hpy8I	GTNNAC	2 cut(s)	16, 980
Hpy99I	CGWCG	1 cut(s)	392
HpyAV	CCTTC	1 cut(s)	748
HpyCH4III	ACNGT	6 cut(s)	184, 475, 846, 901, 1343, 1379
HpyCH4IV	ACGT	4 cut(s)	262, 390, 680, 1039
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1195
HpyF3I	CTNAG	5 cut(s)	336, 924, 1074, 1140, 1304
HpySE526I	ACGT	4 cut(s)	262, 390, 680, 1039
Hsp92II	CATG	9 cut(s)	233, 243, 427, 764, 1055, 1126, 1288, 1431, 1501
HspAI	GCGC	2 cut(s)	128, 731
Kpn2I	TCCGGA	1 cut(s)	1167
Ksp22I	TGATCA	3 cut(s)	205, 232, 381
Kzo9I	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
LguI	GCTCTTC	1 cut(s)	1018
LmnI	GCTCC	1 cut(s)	39
Lsp1109I	GCAGC	4 cut(s)	142, 857, 1462, 1484
LweI	GCATC	4 cut(s)	358, 454, 511, 1059
MaeI	CTAG	2 cut(s)	1019, 1416
MaeII	ACGT	4 cut(s)	262, 390, 680, 1039
MaeIII	GTNAC	3 cut(s)	339, 460, 886
MalI	GATC	7 cut(s)	207, 234, 383, 417, 453, 1010, 1314
MboI	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
MboII	GAAGA	8 cut(s)	54, 102, 152, 504, 561, 1035, 1183, 1471
MfeI	CAATTG	2 cut(s)	278, 1258
MhlI	GDGCHC	1 cut(s)	1191
MluCI	AATT	5 cut(s)	278, 929, 947, 1258, 1335
MlyI	GAGTC	1 cut(s)	347
MmeI	TCCRAC	1 cut(s)	172
Mph1103I	ATGCAT	2 cut(s)	429, 447
MroI	TCCGGA	1 cut(s)	1167
MroXI	GAANNNNTTC	1 cut(s)	1047
MseI	TTAA	4 cut(s)	27, 294, 684, 1227
MslI	CAYNNNNRTG	1 cut(s)	902
MspA1I	CMGCKG	2 cut(s)	971, 1475
MspI	CCGG	1 cut(s)	1168
MspR9I	CCNGG	1 cut(s)	348
MunI	CAATTG	2 cut(s)	278, 1258
Mva1269I	GAATGC	2 cut(s)	249, 447
MvaI	CCWGG	1 cut(s)	348
MvnI	CGCG	1 cut(s)	633
MwoI	GCNNNNNNNGC	1 cut(s)	1195
NdeII	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
NlaIII	CATG	9 cut(s)	233, 243, 427, 764, 1055, 1126, 1288, 1431, 1501
NlaIV	GGNNCC	2 cut(s)	35, 1086
NmuCI	GTSAC	2 cut(s)	339, 886
NsiI	ATGCAT	2 cut(s)	429, 447
NspI	RCATGY	2 cut(s)	243, 1431
PagI	TCATGA	1 cut(s)	1497
PciI	ACATGT	1 cut(s)	1427
PciSI	GCTCTTC	1 cut(s)	1018
PctI	GAATGC	2 cut(s)	249, 447
PdmI	GAANNNNTTC	1 cut(s)	1047
PfeI	GAWTC	2 cut(s)	495, 575
PflFI	GACNNNGTC	1 cut(s)	1286
PkrI	GCNGC	4 cut(s)	132, 872, 1474, 1477
PleI	GAGTC	1 cut(s)	346
PmaCI	CACGTG	1 cut(s)	263
PmlI	CACGTG	1 cut(s)	263
PpsI	GAGTC	1 cut(s)	346
Ppu21I	YACGTR	2 cut(s)	263, 1040
PscI	ACATGT	1 cut(s)	1427
Psp6I	CCWGG	1 cut(s)	346
PspCI	CACGTG	1 cut(s)	263
PspGI	CCWGG	1 cut(s)	346
PspN4I	GGNNCC	2 cut(s)	35, 1086
PstI	CTGCAG	1 cut(s)	1474
PstNI	CAGNNNCTG	2 cut(s)	188, 1478
PsyI	GACNNNGTC	1 cut(s)	1286
PvuII	CAGCTG	2 cut(s)	971, 1475
RsaI	GTAC	4 cut(s)	199, 213, 821, 1038
RsaNI	GTAC	4 cut(s)	198, 212, 820, 1037
RseI	CAYNNNNRTG	1 cut(s)	902
SapI	GCTCTTC	1 cut(s)	1018
SaqAI	TTAA	4 cut(s)	27, 294, 684, 1227
SatI	GCNGC	4 cut(s)	131, 871, 1473, 1476
Sau3AI	GATC	7 cut(s)	205, 232, 381, 415, 451, 1008, 1312
ScaI	AGTACT	2 cut(s)	199, 213
SchI	GAGTC	1 cut(s)	347
ScrFI	CCNGG	1 cut(s)	348
SduI	GDGCHC	1 cut(s)	1191
SfaNI	GCATC	4 cut(s)	358, 454, 511, 1059
SfcI	CTRYAG	3 cut(s)	180, 474, 1470
SmiMI	CAYNNNNRTG	1 cut(s)	902
SmlI	CTYRAG	2 cut(s)	864, 1401
SmoI	CTYRAG	2 cut(s)	864, 1401
Sse9I	AATT	5 cut(s)	278, 929, 947, 1258, 1335
SsiI	CCGC	3 cut(s)	37, 506, 631
SspMI	CTAG	2 cut(s)	1019, 1416
StyD4I	CCNGG	1 cut(s)	346
TaaI	ACNGT	6 cut(s)	184, 475, 846, 901, 1343, 1379
TaiI	ACGT	4 cut(s)	265, 393, 683, 1042
TaqI	TCGA	3 cut(s)	289, 387, 933
TasI	AATT	5 cut(s)	278, 929, 947, 1258, 1335
TatI	WGTACW	3 cut(s)	197, 211, 819
TfiI	GAWTC	2 cut(s)	495, 575
Tru1I	TTAA	4 cut(s)	27, 294, 684, 1227
Tru9I	TTAA	4 cut(s)	27, 294, 684, 1227
TscAI	CASTG	6 cut(s)	123, 321, 478, 740, 904, 1011
TseFI	GTSAC	2 cut(s)	339, 886
TseI	GCWGC	4 cut(s)	130, 870, 1472, 1475
Tsp45I	GTSAC	2 cut(s)	339, 886
TspGWI	ACGGA	1 cut(s)	1209
TspRI	CASTG	6 cut(s)	123, 321, 478, 740, 904, 1011
Tth111I	GACNNNGTC	1 cut(s)	1286
XapI	RAATTY	1 cut(s)	929
XceI	RCATGY	2 cut(s)	243, 1431
XmnI	GAANNNNTTC	1 cut(s)	1047
XspI	CTAG	2 cut(s)	1019, 1416
ZrmI	AGTACT	2 cut(s)	199, 213
Zsp2I	ATGCAT	2 cut(s)	429, 447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.