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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_3G00225920 |
| rosa_samantha | Rh3CG349300 Rh4AG259300 Rh4BG265200 Rh4CG276600 Rh5AG344500 Rh5BG239100 Rh6AG058300 Rh6AG163500 Rh6DG283800 Rh7DG394200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 337 |
| AciI | CCGC | 1 cut(s) | 5 |
| AcsI | RAATTY | 1 cut(s) | 121 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 193, 337 |
| AgsI | TTSAA | 3 cut(s) | 22, 58, 218 |
| AluBI | AGCT | 1 cut(s) | 43 |
| AluI | AGCT | 1 cut(s) | 43 |
| AoxI | GGCC | 1 cut(s) | 195 |
| ApoI | RAATTY | 1 cut(s) | 121 |
| BauI | CACGAG | 1 cut(s) | 254 |
| BbsI | GAAGAC | 2 cut(s) | 65, 114 |
| BccI | CCATC | 1 cut(s) | 331 |
| BceAI | ACGGC | 3 cut(s) | 125, 182, 212 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 148, 182 |
| BfaI | CTAG | 1 cut(s) | 299 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| BmiI | GGNNCC | 2 cut(s) | 139, 226 |
| BpiI | GAAGAC | 2 cut(s) | 65, 114 |
| BsaJI | CCNNGG | 2 cut(s) | 133, 247 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 213, 243 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 193, 337 |
| BseDI | CCNNGG | 2 cut(s) | 133, 247 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 193, 337 |
| BseRI | GAGGAG | 1 cut(s) | 237 |
| BshFI | GGCC | 1 cut(s) | 197 |
| BslFI | GGGAC | 1 cut(s) | 100 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 193, 337 |
| BsmFI | GGGAC | 1 cut(s) | 100 |
| BsnI | GGCC | 1 cut(s) | 197 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 197 |
| BspHI | TCATGA | 2 cut(s) | 93, 285 |
| BspLI | GGNNCC | 2 cut(s) | 139, 226 |
| BssECI | CCNNGG | 2 cut(s) | 133, 247 |
| BssSI | CACGAG | 1 cut(s) | 254 |
| BssT1I | CCWWGG | 1 cut(s) | 133 |
| Bst2BI | CACGAG | 1 cut(s) | 254 |
| BstC8I | GCNNGC | 1 cut(s) | 32 |
| BstDEI | CTNAG | 2 cut(s) | 68, 188 |
| BstDSI | CCRYGG | 1 cut(s) | 247 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 191 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 40 |
| BstNSI | RCATGY | 1 cut(s) | 34 |
| BstV2I | GAAGAC | 2 cut(s) | 65, 114 |
| BsuRI | GGCC | 1 cut(s) | 197 |
| BtgI | CCRYGG | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 1 cut(s) | 32 |
| CciI | TCATGA | 2 cut(s) | 93, 285 |
| CviAII | CATG | 4 cut(s) | 31, 94, 262, 286 |
| CviJI | RGCY | 8 cut(s) | 43, 132, 140, 186, 197, 227, 246, 291 |
| CviKI_1 | RGCY | 8 cut(s) | 43, 132, 140, 186, 197, 227, 246, 291 |
| DdeI | CTNAG | 2 cut(s) | 68, 188 |
| Eco130I | CCWWGG | 1 cut(s) | 133 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 191 |
| EcoT14I | CCWWGG | 1 cut(s) | 133 |
| ErhI | CCWWGG | 1 cut(s) | 133 |
| FaeI | CATG | 4 cut(s) | 34, 97, 265, 289 |
| FaqI | GGGAC | 1 cut(s) | 100 |
| FatI | CATG | 4 cut(s) | 30, 93, 261, 285 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 1 cut(s) | 299 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HaeIII | GGCC | 1 cut(s) | 197 |
| Hin1II | CATG | 4 cut(s) | 34, 97, 265, 289 |
| HindIII | AAGCTT | 1 cut(s) | 41 |
| HinfI | GANTC | 5 cut(s) | 88, 165, 172, 214, 252 |
| Hpy188III | TCNNGA | 4 cut(s) | 94, 169, 256, 286 |
| HpyCH4V | TGCA | 1 cut(s) | 79 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 40 |
| HpyF3I | CTNAG | 2 cut(s) | 68, 188 |
| Hsp92II | CATG | 4 cut(s) | 34, 97, 265, 289 |
| LmnI | GCTCC | 2 cut(s) | 137, 224 |
| MaeI | CTAG | 1 cut(s) | 299 |
| MaeIII | GTNAC | 1 cut(s) | 199 |
| MboII | GAAGA | 4 cut(s) | 70, 113, 116, 119 |
| MluCI | AATT | 3 cut(s) | 121, 145, 232 |
| MlyI | GAGTC | 3 cut(s) | 82, 174, 246 |
| MnlI | CCTC | 5 cut(s) | 187, 215, 274, 295, 312 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 40 |
| NlaIII | CATG | 4 cut(s) | 34, 97, 265, 289 |
| NlaIV | GGNNCC | 2 cut(s) | 139, 226 |
| NmuCI | GTSAC | 1 cut(s) | 199 |
| NspI | RCATGY | 1 cut(s) | 34 |
| PaeI | GCATGC | 1 cut(s) | 34 |
| PagI | TCATGA | 2 cut(s) | 93, 285 |
| PfeI | GAWTC | 2 cut(s) | 172, 214 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 337 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 3 cut(s) | 82, 173, 246 |
| PpsI | GAGTC | 3 cut(s) | 82, 173, 246 |
| PspN4I | GGNNCC | 2 cut(s) | 139, 226 |
| SatI | GCNGC | 1 cut(s) | 5 |
| SchI | GAGTC | 3 cut(s) | 82, 174, 246 |
| SetI | ASST | 6 cut(s) | 45, 85, 285, 300, 306, 323 |
| SphI | GCATGC | 1 cut(s) | 34 |
| Sse9I | AATT | 3 cut(s) | 121, 145, 232 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SspMI | CTAG | 1 cut(s) | 299 |
| StyI | CCWWGG | 1 cut(s) | 133 |
| TaqI | TCGA | 1 cut(s) | 168 |
| TaqII | GACCGA | 1 cut(s) | 113 |
| TasI | AATT | 3 cut(s) | 121, 145, 232 |
| TauI | GCSGC | 1 cut(s) | 7 |
| TfiI | GAWTC | 2 cut(s) | 172, 214 |
| TseFI | GTSAC | 1 cut(s) | 199 |
| Tsp45I | GTSAC | 1 cut(s) | 199 |
| TspDTI | ATGAA | 1 cut(s) | 134 |
| TspGWI | ACGGA | 2 cut(s) | 52, 264 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 337 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 191 |
| XapI | RAATTY | 1 cut(s) | 121 |
| XceI | RCATGY | 1 cut(s) | 34 |
| XspI | CTAG | 1 cut(s) | 299 |