No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75810 |
| fragaria_vesca | FvH4_2g38290 |
| malus_domestica | MD08G1011100.v1.1 MD15G1011100.v1.1 |
| prunus_persica | Prupe.1G363800_v2.0.a1 Prupe.1G363800_v2.0.a1 |
| pyrus_communis | pycom08g00980 pycom15g00950 |
| rosa_chinensis | RchiOBHm_Chr6g0303091 |
| rosa_laevigata | RLG00000011109 |
| rosa_multiflora | Rmu_sc0008911.1_g000002 Rmu_sc0009943.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00165030 |
| rosa_rugosa | Rorug06G0319200 |
| rosa_samantha | Rh6AG432900 Rh6BG469800 Rh6DG432000 |
| rosa_wichuraiana | Rw1G004450 Rw6G037520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 5, 102, 105 |
| AclWI | GGATC | 1 cut(s) | 71 |
| AcuI | CTGAAG | 1 cut(s) | 82 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AleI | CACNNNNGTG | 1 cut(s) | 131 |
| AluBI | AGCT | 1 cut(s) | 96 |
| AluI | AGCT | 1 cut(s) | 96 |
| Alw26I | GTCTC | 1 cut(s) | 180 |
| AlwI | GGATC | 1 cut(s) | 71 |
| AoxI | GGCC | 1 cut(s) | 69 |
| AsuC2I | CCSGG | 1 cut(s) | 61 |
| AsuHPI | GGTGA | 2 cut(s) | 49, 236 |
| BauI | CACGAG | 1 cut(s) | 233 |
| BccI | CCATC | 1 cut(s) | 209 |
| BcnI | CCSGG | 1 cut(s) | 61 |
| BcoDI | GTCTC | 1 cut(s) | 180 |
| BfaI | CTAG | 2 cut(s) | 149, 259 |
| BisI | GCNGC | 1 cut(s) | 103 |
| BlsI | GCNGC | 1 cut(s) | 104 |
| Bme1390I | CCNGG | 1 cut(s) | 61 |
| BmrFI | CCNGG | 1 cut(s) | 61 |
| BmsI | GCATC | 1 cut(s) | 199 |
| BpuMI | CCSGG | 1 cut(s) | 61 |
| BsaAI | YACGTR | 1 cut(s) | 46 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BshFI | GGCC | 1 cut(s) | 71 |
| BsiSI | CCGG | 1 cut(s) | 60 |
| BsmAI | GTCTC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 71 |
| Bsp143I | GATC | 2 cut(s) | 39, 63 |
| BspACI | CCGC | 3 cut(s) | 5, 102, 105 |
| BspANI | GGCC | 1 cut(s) | 71 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BssMI | GATC | 2 cut(s) | 39, 63 |
| BssSI | CACGAG | 1 cut(s) | 233 |
| Bst2BI | CACGAG | 1 cut(s) | 233 |
| Bst4CI | ACNGT | 1 cut(s) | 130 |
| BstBAI | YACGTR | 1 cut(s) | 46 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstKTI | GATC | 2 cut(s) | 42, 66 |
| BstMAI | GTCTC | 1 cut(s) | 180 |
| BstMBI | GATC | 2 cut(s) | 39, 63 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 102, 191 |
| BstSCI | CCNGG | 1 cut(s) | 59 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 133 |
| BsuRI | GGCC | 1 cut(s) | 71 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| BtsI | GCAGTG | 1 cut(s) | 24 |
| BtsIMutI | CAGTG | 1 cut(s) | 24 |
| CseI | GACGC | 2 cut(s) | 23, 166 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 221, 256 |
| CviJI | RGCY | 3 cut(s) | 71, 96, 185 |
| CviKI_1 | RGCY | 3 cut(s) | 71, 96, 185 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DpnI | GATC | 2 cut(s) | 41, 65 |
| DpnII | GATC | 2 cut(s) | 39, 63 |
| Eco147I | AGGCCT | 1 cut(s) | 71 |
| Eco57I | CTGAAG | 1 cut(s) | 82 |
| FauI | CCCGC | 1 cut(s) | 98 |
| Fnu4HI | GCNGC | 1 cut(s) | 103 |
| FokI | GGATG | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 1 cut(s) | 103 |
| FspBI | CTAG | 2 cut(s) | 149, 259 |
| GluI | GCNGC | 1 cut(s) | 103 |
| HaeIII | GGCC | 1 cut(s) | 71 |
| HapII | CCGG | 1 cut(s) | 60 |
| HgaI | GACGC | 2 cut(s) | 23, 166 |
| HpaII | CCGG | 1 cut(s) | 60 |
| HphI | GGTGA | 2 cut(s) | 49, 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 232 |
| Hpy188I | TCNGA | 3 cut(s) | 13, 93, 156 |
| Hpy8I | GTNNAC | 1 cut(s) | 232 |
| Hpy99I | CGWCG | 1 cut(s) | 40 |
| HpyCH4III | ACNGT | 1 cut(s) | 130 |
| HpyCH4IV | ACGT | 1 cut(s) | 45 |
| HpyCH4V | TGCA | 1 cut(s) | 243 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 102, 191 |
| HpySE526I | ACGT | 1 cut(s) | 45 |
| Kzo9I | GATC | 2 cut(s) | 39, 63 |
| LmnI | GCTCC | 1 cut(s) | 93 |
| LpnPI | CCDG | 2 cut(s) | 72, 73 |
| LweI | GCATC | 1 cut(s) | 199 |
| MaeI | CTAG | 2 cut(s) | 149, 259 |
| MaeII | ACGT | 1 cut(s) | 45 |
| MalI | GATC | 2 cut(s) | 41, 65 |
| MboI | GATC | 2 cut(s) | 39, 63 |
| MmeI | TCCRAC | 1 cut(s) | 71 |
| MnlI | CCTC | 1 cut(s) | 133 |
| MslI | CAYNNNNRTG | 1 cut(s) | 131 |
| MspA1I | CMGCKG | 1 cut(s) | 102 |
| MspI | CCGG | 1 cut(s) | 60 |
| MspR9I | CCNGG | 1 cut(s) | 61 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 102, 191 |
| NciI | CCSGG | 1 cut(s) | 61 |
| NdeII | GATC | 2 cut(s) | 39, 63 |
| OliI | CACNNNNGTG | 1 cut(s) | 131 |
| PceI | AGGCCT | 1 cut(s) | 71 |
| PkrI | GCNGC | 1 cut(s) | 104 |
| Ppu21I | YACGTR | 1 cut(s) | 46 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 131 |
| SatI | GCNGC | 1 cut(s) | 103 |
| Sau3AI | GATC | 2 cut(s) | 39, 63 |
| ScrFI | CCNGG | 1 cut(s) | 61 |
| SetI | ASST | 3 cut(s) | 48, 98, 250 |
| SfaNI | GCATC | 1 cut(s) | 199 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 131 |
| SseBI | AGGCCT | 1 cut(s) | 71 |
| SsiI | CCGC | 3 cut(s) | 5, 102, 105 |
| SspMI | CTAG | 2 cut(s) | 149, 259 |
| StuI | AGGCCT | 1 cut(s) | 71 |
| StyD4I | CCNGG | 1 cut(s) | 59 |
| TaaI | ACNGT | 1 cut(s) | 130 |
| TaiI | ACGT | 1 cut(s) | 48 |
| TauI | GCSGC | 1 cut(s) | 105 |
| TscAI | CASTG | 1 cut(s) | 24 |
| TspRI | CASTG | 1 cut(s) | 24 |
| XspI | CTAG | 2 cut(s) | 149, 259 |