Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0005129

Physical Location & Seq

Genomic Coordinates Reverse (-)

26791404 .. 26799270

Gene Structure 7867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G011930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3051 bp

ATGGGCCGGAACTCTTCGGCTCCTCCGCCCATCCTCGACGACAATGGCGGTGCCGGCGGTAACGATCTAGGCTTCCACTCGATTCGCGATCGTTTTCCATTCAAACGGAACCCTAACCCTAGCCATCACCGCGGCCGGGACCGGAGCTTAGTGGATCGCGGCCTTTCGTCCCTGCGCCACCGACCGCATCACCGCTTCTACCGCAAGGGAGGAAAGTCGGCGTTCTATTCCGTCCTTATCTTCGTCCTGTTCGGCTTCGCGGCGGCGACGATGCTGTTGCAGAGCTCCATGACTTCGGTCTTCAGGCAAGGGAGTGAGAGAGGGCGGTTGTTGAGGGACGGCTTGAAGTTCGGGAGCACCTTGAGGTTTGTGCCTGGAAGGGTTTCTCAGAGGTTCGTCCAGGCTGATGGGCTCGACGGAGCTCGGAACGAGCCCAGGATTGGTGTCCGGCCGCCGAGGCTAGCGCTTATCTTGGGAAACATGAAGAAGGATCCACATTCCTTGATGTTGATTACTGTGATGAAGAATATCAAGAAATTGGGTTATAGGCTGAAGATATTTTCCACAGCGAATGGTAAAGCACGTAAAATGTGGGAGGAACATGGTGGGCCAATATCCATTTTAGCTCCGGAGAAATACAGCCTTATTGATTGGTCGATTTTTGAAGGTCTTATTGTTGACTCCCTTGAAGCAAAAGAACTCATTTCAAGTCTTATGCAGGAGCCTTTTTGTTCAGTACCACTGATATGGATAATTCAAGAAGATACACTTGCTAAGCGTCTTCCATTGTATGCGGAAATGGGCTGGACACATCTTGTTTCTCATTGGAAAAGTGTTCTTAGCAGAGCTAATGTTGTGGTGTTTCCAGATTTCACTTTGCCGGTAAACATATGTTATACAGTGTTTGACACTGGAAACTTCTTTGTCATTCCTGGATCCCCTGTCGATGTTTGGGCTGCCGAAAGCTACAGTAAAACCCACTCCAAGAATCAATTGAGGAAGAACAACAGATTCAGTGAAGATGATACGTTGGTTCTAGTTGTTGGAAGTTCTTTTTTCTTCAATGAGCTTTCATGGGACTATGCTGTAGCGATGCATTCTATAGGACCACTTCTAATAGAATATGCAAGGAGGAAAGATGCAGAAGGGTTGTTCAAATTTGTTTTTTTATTTGGTAATTCATCCGATGGATATGATGATGCATTCCAGGAAGTTGCTTCACGTCTAGGACTTCTTCAAGGTTCTGTAAGGCATTACGGCTTGAATGATGACGTCAATAGTGTGTTATTAATGGCAGATATTGTTCTCTATGGTTCTTCACAAGATGTACAGGGTTTTCCTCCATTGCTTATCCGTGCCATGACTTTTGGAATCCCAGTTATTGCACCTGATTTTCCTGTCCTGAAGAAATATTTAGTCGATGGAGTTCACACAGTATTTTTTCCAAGACATGATCCCGATGCTTTACTGAAGGCATTCTCGCAAATGATTTCAAATGGGAAACTTTCTAAATTTGCTCGAACAGTTGCTTCCTCTGGAAGACTGATTGCTATGAACCTCCTTGCATCAGAATCCATAACTGGTTATGCAAGGCTTCTGGAGAGTGTACTAAATTTTCCATCAGATGCTCTGCTGCCAGGTCCATTCTCCCAGCTTCAACAGGGTACATGGGAATGGAATTTGTTCGGGAGTGAAATAGATTATGGTACTGAGTTTTCCGGATTTTCTTACTCAAAAAACACCTCTGAGAATGGAACTGAGAATTTGGCACGCGATAATCCAACTCAACTAGATTGGGACATCTTGAGGGAAATTGAACTTTCTGAAGAATATGAGAGACTAGAAATGGAGGAGCTAGCAGAAAGAATGGAGAGTGATCCTGGTCAATGGGATGACATATATCGTAATGCCCGAAAAGCTGAAAAGCTTAAGTTTGAAGCAAATGAGAGGGATGAGGGGGAACTTGAGAGGACGGGCCAGCCAGTGTGTATTTATGAGATATACATTGGATCCGGTAGCTGGCCATTCTTGCACCATGGTTCATTGTACCGTGGGCTAAGTCTTTCTACAAAAGCACGAAGATCAAAATCAGATGATGTGAATGCCGTTGACCGGCTTCCCATATTGAATGAAACTTACTATCGTAATGTTCTCTGTGAGATTGGAGGAATGTTTGCTATTGCAAACAAGCTGGATAACATTCATAAACGACCTTGGATTGGGTTTCAGTCTTGGCGTGCTGCTGGTAGAAAGGTATCTTTGTCCAAGAAAGCTGAAAGAGTTTTGGAACAAGCAATTCAAGACAACACGAAAGGAGATGTGATATACTTTTGGTCACGCTTGAACAGGGATGGTGGGGTTACAGGAAGCAAAGATGCACTCACTTTTTGGTCCGCATGTGACATCTTGAATGAGGGGCATTGCAGAAATATTTTTGAAGATGCATTTCGCTTGATGTATGTCTTGCCATCTAATGCTGAAGCTCTTCCTCCCATGCCAGAGGATGGTGGTCACTGGTCTGCCTTGCATAGCTGGGTGATGCCAACTCGCTCCTTCCTTGAGTTCGCGATGTTTTCTCGGATGTTTGTTGATTCGCTTGATGCATTGCACACCAACTCTACCAAGAGAAATATCTGCCTGTTGGGTTCTTCGGAACCTGAGCAAAGACATTGTTACTGTCGGGTGTTAGAACTTCTTGTCAATGTCTGGGCTTATCATAGTGCACGAACGATGGTTTACATAGATCCGCTCTCGGGTTCACTGGAAGAGCAGCACCCAGTTGAGCAACGTAAAGGATTCATGTGGGCAAAATATTTCAATAGTACGTTACTGAAGAGTATGGATGAAGATTTAGCAGAAGCAGCAGATGATGGTGACCATCCGAGGGAGACGTGGTTATGGCCATTAACTGGGGAAGTGCATTGGCAAGGAATTTATGAGAGGGAGAGGGAAGAGAGATATAGGCTAAAGATGGACAAGAAAAGGAAAACGAAAGAGAAATTATTTGAAAGAATGAAGTATGGATACAAGCAGAAGACGCTTGGGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glycos_transf_1

Protein Analysis

1016

Amino Acids

115.66

Weight (kDa)

7.16

Isoelectric Point (pI)

39.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_trans_1_4	PF13692	398 - 499	1.3e-08	Glycosyl transferases group 1
Glycos_transf_1	PF00534	412 - 503	6.6e-10	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005129)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04480 AT5G04480
fragaria_vesca	FvH4_7g06830 FvH4_7g06830 FvH4_7g06830 FvH4_7g06830 FvH4_7g06830 FvH4_7g06830 FvH4_7g06830
malus_domestica	MD02G1241600.v1.1 MD07G1075100.v1.1
prunus_persica	Prupe.2G095400_v2.0.a1 Prupe.2G095400_v2.0.a1
pyrus_communis	pycom01g10260 pycom02g20700 pycom02g20720 pycom02g20730 pycom02g20780 pycom07g05910
rosa_chinensis	RchiOBHm_Chr1g0336581
rosa_laevigata	RLG00000029353
rosa_multiflora	Rmu_sc0009324.1_g000007
rosa_roxburghii	Rroxscaffold_4G00315490
rosa_rugosa	Rorug01G0126500 Rorug01G0126600
rosa_samantha	Rh1AG147700 Rh1BG115500 Rh1CG139100 Rh1DG154200
rosa_wichuraiana	Rw1G011930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1275
AccB1I	GGYRCC	1 cut(s)	50
AccB7I	CCANNNNNTGG	2 cut(s)	2504, 2909
AccBSI	CCGCTC	1 cut(s)	2749
AccII	CGCG	6 cut(s)	87, 132, 159, 260, 1773, 2567
AccIII	TCCGGA	2 cut(s)	628, 1718
AcoI	YGGCCR	4 cut(s)	133, 449, 2021, 2900
AcsI	RAATTY	6 cut(s)	1157, 1511, 1612, 1678, 1762, 2931
AcuI	CTGAAG	7 cut(s)	286, 572, 1424, 1490, 1845, 2499, 2852
AcyI	GRCGYC	1 cut(s)	1272
AfaI	GTAC	7 cut(s)	738, 1329, 1608, 1666, 1708, 2048, 2824
AfeI	AGCGCT	1 cut(s)	465
AfiI	CCNNNNNNNGG	9 cut(s)	136, 440, 2019, 2112, 2219, 2504, 2753, 2884, 2909
AflII	CTTAAG	1 cut(s)	1928
AjiI	CACGTC	2 cut(s)	1223, 2892
AjnI	CCWGG	7 cut(s)	373, 399, 434, 931, 1206, 1636, 1879
Alw21I	GWGCWC	4 cut(s)	287, 359, 424, 2725
Alw26I	GTCTC	2 cut(s)	1831, 2882
Alw44I	GTGCAC	1 cut(s)	2721
Ama87I	CYCGRG	1 cut(s)	2752
Aor13HI	TCCGGA	2 cut(s)	628, 1718
Aor51HI	AGCGCT	1 cut(s)	465
AoxI	GGCC	8 cut(s)	4, 133, 160, 449, 608, 1975, 2021, 2900
ApaLI	GTGCAC	1 cut(s)	2721
ApeKI	GCWGC	5 cut(s)	956, 1633, 2240, 2770, 2861
ApoI	RAATTY	6 cut(s)	1157, 1511, 1612, 1678, 1762, 2931
AseI	ATTAAT	1 cut(s)	1289
Asp700I	GAANNNNTTC	4 cut(s)	382, 1475, 1682, 2484
AspLEI	GCGC	2 cut(s)	177, 466
AspS9I	GGNCC	7 cut(s)	4, 139, 608, 1106, 1640, 1975, 2391
AsuC2I	CCSGG	1 cut(s)	137
AsuHPI	GGTGA	4 cut(s)	119, 182, 2548, 2885
AsuNHI	GCTAGC	2 cut(s)	460, 1855
AvaI	CYCGRG	1 cut(s)	2752
AvaII	GGWCC	4 cut(s)	139, 1106, 1640, 2391
BaeGI	GKGCMC	1 cut(s)	2725
BaeI	ACNNNNGTAYC	2 cut(s)	1017, 1050
BalI	TGGCCA	2 cut(s)	2023, 2902
BamHI	GGATCC	3 cut(s)	490, 935, 2009
BanI	GGYRCC	1 cut(s)	50
BanII	GRGCYC	4 cut(s)	287, 414, 424, 435
BarI	GAAGNNNNNNTAC	2 cut(s)	3008, 3040
BbsI	GAAGAC	4 cut(s)	292, 773, 1546, 3041
Bbv12I	GWGCWC	4 cut(s)	287, 359, 424, 2725
BbvI	GCAGC	5 cut(s)	943, 1620, 2227, 2782, 2873
BceAI	ACGGC	3 cut(s)	355, 1273, 2090
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	7 cut(s)	375, 401, 436, 933, 1208, 1638, 1881
BciVI	GTATCC	1 cut(s)	3017
BcnI	CCSGG	1 cut(s)	137
BcoDI	GTCTC	2 cut(s)	1831, 2882
BfaI	CTAG	8 cut(s)	68, 120, 461, 1037, 1226, 1790, 1841, 1856
BfmI	CTRYAG	3 cut(s)	967, 1086, 1101
BfoI	RGCGCY	1 cut(s)	467
BfrI	CTTAAG	1 cut(s)	1928
BfuI	GTATCC	1 cut(s)	3017
BglI	GCCNNNNNGGC	1 cut(s)	457
BlpI	GCTNAGC	1 cut(s)	774
Bme1390I	CCNGG	8 cut(s)	137, 375, 401, 436, 933, 1208, 1638, 1881
Bme18I	GGWCC	4 cut(s)	139, 1106, 1640, 2391
BmeT110I	CYCGRG	1 cut(s)	2752
BmgBI	CACGTC	2 cut(s)	1223, 2892
BmgT120I	GGNCC	7 cut(s)	4, 139, 608, 1106, 1640, 1975, 2391
BmiI	GGNNCC	9 cut(s)	21, 52, 110, 140, 492, 723, 937, 2011, 2655
BmrFI	CCNGG	8 cut(s)	137, 375, 401, 436, 933, 1208, 1638, 1881
BmrI	ACTGGG	3 cut(s)	1370, 2771, 2919
BmtI	GCTAGC	2 cut(s)	464, 1859
BmuI	ACTGGG	3 cut(s)	1370, 2771, 2919
BoxI	GACNNNNGTC	1 cut(s)	296
BpiI	GAAGAC	4 cut(s)	292, 773, 1546, 3041
BpmI	CTGGAG	1 cut(s)	1619
Bpu10I	CCTNAGC	1 cut(s)	2658
Bpu1102I	GCTNAGC	1 cut(s)	774
BpuEI	CTTGAG	4 cut(s)	382, 1825, 1985, 2579
BpuMI	CCSGG	1 cut(s)	137
BsaAI	YACGTR	1 cut(s)	584
BsaBI	GATNNNNATC	1 cut(s)	2086
BsaHI	GRCGYC	1 cut(s)	1272
BsaJI	CCNNGG	7 cut(s)	130, 434, 455, 2035, 2050, 2213, 2882
BsaWI	WCCGGW	4 cut(s)	141, 628, 1718, 2012
BsaXI	ACNNNNNCTCC	2 cut(s)	2879, 2909
Bsc4I	CCNNNNNNNGG	9 cut(s)	136, 440, 2019, 2112, 2219, 2504, 2753, 2884, 2909
Bse118I	RCCGGY	3 cut(s)	53, 880, 2112
Bse1I	ACTGG	8 cut(s)	916, 1376, 1585, 1982, 2519, 2766, 2777, 2914
Bse3DI	GCAATG	3 cut(s)	1343, 2419, 2603
Bse8I	GATNNNNATC	1 cut(s)	2086
BseAI	TCCGGA	2 cut(s)	628, 1718
BseBI	CCWGG	7 cut(s)	375, 401, 436, 933, 1208, 1638, 1881
BseDI	CCNNGG	7 cut(s)	130, 434, 455, 2035, 2050, 2213, 2882
BseGI	GGATG	9 cut(s)	30, 1181, 1897, 1957, 2356, 2509, 2586, 2848, 2878
BseJI	GATNNNNATC	1 cut(s)	2086
BseLI	CCNNNNNNNGG	9 cut(s)	136, 440, 2019, 2112, 2219, 2504, 2753, 2884, 2909
BseMI	GCAATG	3 cut(s)	1343, 2419, 2603
BseMII	CTCAG	5 cut(s)	401, 1701, 1737, 1749, 2649
BseNI	ACTGG	8 cut(s)	916, 1376, 1585, 1982, 2519, 2766, 2777, 2914
BseRI	GAGGAG	2 cut(s)	12, 1865
BseSI	GKGCMC	1 cut(s)	2725
BseX3I	CGGCCG	2 cut(s)	133, 449
BseXI	GCAGC	5 cut(s)	943, 1620, 2227, 2782, 2873
BseYI	CCCAGC	2 cut(s)	1650, 2532
Bsh1236I	CGCG	6 cut(s)	87, 132, 159, 260, 1773, 2567
Bsh1285I	CGRYCG	4 cut(s)	91, 136, 185, 452
BshFI	GGCC	8 cut(s)	6, 135, 162, 451, 610, 1977, 2023, 2902
BshNI	GGYRCC	1 cut(s)	50
BsiEI	CGRYCG	4 cut(s)	91, 136, 185, 452
BsiHKAI	GWGCWC	4 cut(s)	287, 359, 424, 2725
BsiHKCI	CYCGRG	1 cut(s)	2752
BslFI	GGGAC	5 cut(s)	152, 154, 350, 1091, 1811
BslI	CCNNNNNNNGG	9 cut(s)	136, 440, 2019, 2112, 2219, 2504, 2753, 2884, 2909
BsmAI	GTCTC	2 cut(s)	1831, 2882
BsmBI	CGTCTC	1 cut(s)	2882
BsmFI	GGGAC	5 cut(s)	152, 154, 350, 1091, 1811
BsmI	GAATGC	4 cut(s)	1096, 1202, 1475, 2107
BsnI	GGCC	8 cut(s)	6, 135, 162, 451, 610, 1977, 2023, 2902
BsoBI	CYCGRG	1 cut(s)	2752
Bsp1286I	GDGCHC	6 cut(s)	287, 359, 414, 424, 435, 2725
Bsp13I	TCCGGA	2 cut(s)	628, 1718
Bsp1407I	TGTACA	1 cut(s)	1327
Bsp1720I	GCTNAGC	1 cut(s)	774
Bsp19I	CCATGG	1 cut(s)	2035
Bsp68I	TCGCGA	2 cut(s)	87, 2567
BspANI	GGCC	8 cut(s)	6, 135, 162, 451, 610, 1977, 2023, 2902
BspCNI	CTCAG	5 cut(s)	400, 1702, 1738, 1750, 2650
BspEI	TCCGGA	2 cut(s)	628, 1718
BspFNI	CGCG	6 cut(s)	87, 132, 159, 260, 1773, 2567
BspLI	GGNNCC	9 cut(s)	21, 52, 110, 140, 492, 723, 937, 2011, 2655
BspOI	GCTAGC	2 cut(s)	464, 1859
BspQI	GCTCTTC	2 cut(s)	2490, 2760
BspT107I	GGYRCC	1 cut(s)	50
BspTI	CTTAAG	1 cut(s)	1928
BsrBI	CCGCTC	1 cut(s)	2749
BsrDI	GCAATG	3 cut(s)	1343, 2419, 2603
BsrFI	RCCGGY	3 cut(s)	53, 880, 2112
BsrGI	TGTACA	1 cut(s)	1327
BsrI	ACTGG	8 cut(s)	916, 1376, 1585, 1982, 2519, 2766, 2777, 2914
BssAI	RCCGGY	3 cut(s)	53, 880, 2112
BssECI	CCNNGG	7 cut(s)	130, 434, 455, 2035, 2050, 2213, 2882
BssNI	GRCGYC	1 cut(s)	1272
BssT1I	CCWWGG	2 cut(s)	2035, 2213
Bst2UI	CCWGG	7 cut(s)	375, 401, 436, 933, 1208, 1638, 1881
Bst4CI	ACNGT	7 cut(s)	517, 901, 971, 1435, 1525, 2051, 2678
Bst6I	CTCTTC	5 cut(s)	19, 2490, 2760, 2828, 2946
BstACI	GRCGYC	1 cut(s)	1272
BstAFI	CTTAAG	1 cut(s)	1928
BstAUI	TGTACA	1 cut(s)	1327
BstBAI	YACGTR	1 cut(s)	584
BstC8I	GCNNGC	7 cut(s)	55, 462, 1771, 1857, 1979, 2021, 2238
BstDEI	CTNAG	9 cut(s)	148, 387, 774, 839, 1710, 1746, 1758, 2057, 2658
BstDSI	CCRYGG	3 cut(s)	130, 2035, 2050
BstEII	GGTNACC	1 cut(s)	2873
BstF5I	GGATG	9 cut(s)	30, 1181, 1897, 1957, 2356, 2509, 2586, 2848, 2878
BstFNI	CGCG	6 cut(s)	87, 132, 159, 260, 1773, 2567
BstH2I	RGCGCY	1 cut(s)	467
BstHHI	GCGC	2 cut(s)	177, 466
BstMAI	GTCTC	2 cut(s)	1831, 2882
BstMCI	CGRYCG	4 cut(s)	91, 136, 185, 452
BstMWI	GCNNNNNNNGC	8 cut(s)	54, 129, 201, 457, 1916, 2029, 2861, 3037
BstNI	CCWGG	7 cut(s)	375, 401, 436, 933, 1208, 1638, 1881
BstNSI	RCATGY	1 cut(s)	2400
BstPAI	GACNNNNGTC	1 cut(s)	296
BstPI	GGTNACC	1 cut(s)	2873
BstSCI	CCNGG	8 cut(s)	135, 373, 399, 434, 931, 1206, 1636, 1879
BstSFI	CTRYAG	3 cut(s)	967, 1086, 1101
BstSLI	GKGCMC	1 cut(s)	2725
BstUI	CGCG	6 cut(s)	87, 132, 159, 260, 1773, 2567
BstV1I	GCAGC	5 cut(s)	943, 1620, 2227, 2782, 2873
BstV2I	GAAGAC	4 cut(s)	292, 773, 1546, 3041
BstX2I	RGATCY	4 cut(s)	490, 935, 2009, 2743
BstXI	CCANNNNNNTGG	2 cut(s)	407, 747
BstYI	RGATCY	4 cut(s)	490, 935, 2009, 2743
BstZI	CGGCCG	2 cut(s)	133, 449
BsuI	GTATCC	1 cut(s)	3017
BsuRI	GGCC	8 cut(s)	6, 135, 162, 451, 610, 1977, 2023, 2902
BtgI	CCRYGG	3 cut(s)	130, 2035, 2050
BtgZI	GCGATG	2 cut(s)	1106, 2582
BtrI	CACGTC	2 cut(s)	1223, 2892
BtsCI	GGATG	9 cut(s)	30, 1181, 1897, 1957, 2356, 2509, 2586, 2848, 2878
BtsIMutI	CAGTG	7 cut(s)	740, 906, 909, 1021, 1989, 2512, 2759
BtuMI	TCGCGA	2 cut(s)	87, 2567
Cac8I	GCNNGC	7 cut(s)	55, 462, 1771, 1857, 1979, 2021, 2238
CfoI	GCGC	2 cut(s)	177, 466
Cfr10I	RCCGGY	3 cut(s)	53, 880, 2112
Cfr13I	GGNCC	7 cut(s)	4, 139, 608, 1106, 1640, 1975, 2391
Cfr42I	CCGCGG	1 cut(s)	133
CseI	GACGC	2 cut(s)	767, 3046
Csp6I	GTAC	7 cut(s)	737, 1328, 1607, 1665, 1707, 2047, 2823
CspCI	CAANNNNNGTGG	2 cut(s)	483, 518
CviQI	GTAC	7 cut(s)	737, 1328, 1607, 1665, 1707, 2047, 2823
DdeI	CTNAG	9 cut(s)	148, 387, 774, 839, 1710, 1746, 1758, 2057, 2658
EaeI	YGGCCR	4 cut(s)	133, 449, 2021, 2900
EagI	CGGCCG	2 cut(s)	133, 449
Eam1104I	CTCTTC	5 cut(s)	19, 2490, 2760, 2828, 2946
EarI	CTCTTC	5 cut(s)	19, 2490, 2760, 2828, 2946
EciI	GGCGGA	1 cut(s)	15
Ecl136II	GAGCTC	2 cut(s)	285, 422
EclXI	CGGCCG	2 cut(s)	133, 449
Eco130I	CCWWGG	2 cut(s)	2035, 2213
Eco24I	GRGCYC	4 cut(s)	287, 414, 424, 435
Eco47I	GGWCC	4 cut(s)	139, 1106, 1640, 2391
Eco47III	AGCGCT	1 cut(s)	465
Eco52I	CGGCCG	2 cut(s)	133, 449
Eco53kI	GAGCTC	2 cut(s)	285, 422
Eco57I	CTGAAG	7 cut(s)	286, 572, 1424, 1490, 1845, 2499, 2852
Eco88I	CYCGRG	1 cut(s)	2752
Eco91I	GGTNACC	1 cut(s)	2873
EcoICRI	GAGCTC	2 cut(s)	285, 422
EcoO65I	GGTNACC	1 cut(s)	2873
EcoRII	CCWGG	7 cut(s)	373, 399, 434, 931, 1206, 1636, 1879
EcoT14I	CCWWGG	2 cut(s)	2035, 2213
EcoT22I	ATGCAT	4 cut(s)	1098, 1204, 2446, 2605
EcoT38I	GRGCYC	4 cut(s)	287, 414, 424, 435
ErhI	CCWWGG	2 cut(s)	2035, 2213
Esp3I	CGTCTC	1 cut(s)	2882
FalI	AAGNNNNNCTT	2 cut(s)	753, 785
FaqI	GGGAC	5 cut(s)	152, 154, 350, 1091, 1811
FauNDI	CATATG	1 cut(s)	890
FokI	GGATG	9 cut(s)	17, 1168, 1904, 1964, 2363, 2516, 2593, 2855, 2865
FriOI	GRGCYC	4 cut(s)	287, 414, 424, 435
FspBI	CTAG	8 cut(s)	68, 120, 461, 1037, 1226, 1790, 1841, 1856
GlaI	GCGC	2 cut(s)	176, 465
GsaI	CCCAGC	2 cut(s)	1654, 2536
GsuI	CTGGAG	1 cut(s)	1619
HaeII	RGCGCY	1 cut(s)	467
HaeIII	GGCC	8 cut(s)	6, 135, 162, 451, 610, 1977, 2023, 2902
HgaI	GACGC	2 cut(s)	767, 3046
HhaI	GCGC	2 cut(s)	177, 466
Hin1I	GRCGYC	1 cut(s)	1272
Hin6I	GCGC	2 cut(s)	175, 464
HinP1I	GCGC	2 cut(s)	175, 464
HincII	GTYRAC	2 cut(s)	679, 2110
HindII	GTYRAC	2 cut(s)	679, 2110
HindIII	AAGCTT	1 cut(s)	1925
HinfI	GANTC	8 cut(s)	82, 680, 988, 1011, 1371, 1571, 2591, 2796
HphI	GGTGA	4 cut(s)	119, 182, 2548, 2885
Hpy166II	GTNNAC	8 cut(s)	679, 886, 1429, 1607, 2110, 2723, 2737, 2759
Hpy8I	GTNNAC	8 cut(s)	679, 886, 1429, 1607, 2110, 2723, 2737, 2759
Hpy99I	CGWCG	3 cut(s)	41, 271, 419
HpyAV	CCTTC	6 cut(s)	372, 481, 659, 1139, 1465, 2563
HpyCH4III	ACNGT	7 cut(s)	517, 901, 971, 1435, 1525, 2051, 2678
HpyCH4IV	ACGT	7 cut(s)	583, 1028, 1222, 1272, 2788, 2825, 2891
HpyF10VI	GCNNNNNNNGC	8 cut(s)	54, 129, 201, 457, 1916, 2029, 2861, 3037
HpyF3I	CTNAG	9 cut(s)	148, 387, 774, 839, 1710, 1746, 1758, 2057, 2658
HpySE526I	ACGT	7 cut(s)	583, 1028, 1222, 1272, 2788, 2825, 2891
Hsp92I	GRCGYC	1 cut(s)	1272
HspAI	GCGC	2 cut(s)	175, 464
Kpn2I	TCCGGA	2 cut(s)	628, 1718
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
KspI	CCGCGG	1 cut(s)	133
LguI	GCTCTTC	2 cut(s)	2490, 2760
LmnI	GCTCC	9 cut(s)	25, 144, 290, 354, 419, 631, 721, 1852, 2555
Lsp1109I	GCAGC	5 cut(s)	943, 1620, 2227, 2782, 2873
MaeI	CTAG	8 cut(s)	68, 120, 461, 1037, 1226, 1790, 1841, 1856
MaeII	ACGT	7 cut(s)	583, 1028, 1222, 1272, 2788, 2825, 2891
MaeIII	GTNAC	8 cut(s)	59, 2334, 2359, 2399, 2510, 2672, 2826, 2873
MbiI	CCGCTC	1 cut(s)	2749
MfeI	CAATTG	1 cut(s)	992
MflI	RGATCY	4 cut(s)	490, 935, 2009, 2743
MhlI	GDGCHC	6 cut(s)	287, 359, 414, 424, 435, 2725
MlsI	TGGCCA	2 cut(s)	2023, 2902
MluNI	TGGCCA	2 cut(s)	2023, 2902
MlyI	GAGTC	1 cut(s)	674
MmeI	TCCRAC	2 cut(s)	1024, 1805
Mox20I	TGGCCA	2 cut(s)	2023, 2902
Mph1103I	ATGCAT	4 cut(s)	1098, 1204, 2446, 2605
MroI	TCCGGA	2 cut(s)	628, 1718
MroNI	GCCGGC	1 cut(s)	53
MroXI	GAANNNNTTC	4 cut(s)	382, 1475, 1682, 2484
MscI	TGGCCA	2 cut(s)	2023, 2902
MseI	TTAA	3 cut(s)	1289, 1929, 2906
MslI	CAYNNNNRTG	2 cut(s)	745, 1672
Msp20I	TGGCCA	2 cut(s)	2023, 2902
MspA1I	CMGCKG	1 cut(s)	132
MspCI	CTTAAG	1 cut(s)	1928
MspR9I	CCNGG	8 cut(s)	137, 375, 401, 436, 933, 1208, 1638, 1881
MunI	CAATTG	1 cut(s)	992
Mva1269I	GAATGC	4 cut(s)	1096, 1202, 1475, 2107
MvaI	CCWGG	7 cut(s)	375, 401, 436, 933, 1208, 1638, 1881
MvnI	CGCG	6 cut(s)	87, 132, 159, 260, 1773, 2567
MwoI	GCNNNNNNNGC	8 cut(s)	54, 129, 201, 457, 1916, 2029, 2861, 3037
NaeI	GCCGGC	1 cut(s)	55
NciI	CCSGG	1 cut(s)	137
NcoI	CCATGG	1 cut(s)	2035
NdeI	CATATG	1 cut(s)	890
NgoMIV	GCCGGC	1 cut(s)	53
NheI	GCTAGC	2 cut(s)	460, 1855
NlaIV	GGNNCC	9 cut(s)	21, 52, 110, 140, 492, 723, 937, 2011, 2655
NmeAIII	GCCGAG	1 cut(s)	480
NmuCI	GTSAC	4 cut(s)	2334, 2399, 2510, 2873
NruI	TCGCGA	2 cut(s)	87, 2567
NsiI	ATGCAT	4 cut(s)	1098, 1204, 2446, 2605
NspI	RCATGY	1 cut(s)	2400
PciSI	GCTCTTC	2 cut(s)	2490, 2760
PcsI	WCGNNNNNNNCGW	1 cut(s)	1909
PctI	GAATGC	4 cut(s)	1096, 1202, 1475, 2107
PdiI	GCCGGC	1 cut(s)	55
PdmI	GAANNNNTTC	4 cut(s)	382, 1475, 1682, 2484
PfeI	GAWTC	7 cut(s)	82, 988, 1011, 1371, 1571, 2591, 2796
PflMI	CCANNNNNTGG	2 cut(s)	2504, 2909
PfoI	TCCNGGA	2 cut(s)	931, 1206
Ple19I	CGATCG	1 cut(s)	91
PleI	GAGTC	1 cut(s)	674
PpsI	GAGTC	1 cut(s)	674
Ppu21I	YACGTR	1 cut(s)	584
PshAI	GACNNNNGTC	1 cut(s)	296
PshBI	ATTAAT	1 cut(s)	1289
Psp124BI	GAGCTC	2 cut(s)	287, 424
Psp6I	CCWGG	7 cut(s)	373, 399, 434, 931, 1206, 1636, 1879
PspEI	GGTNACC	1 cut(s)	2873
PspFI	CCCAGC	2 cut(s)	1650, 2532
PspGI	CCWGG	7 cut(s)	373, 399, 434, 931, 1206, 1636, 1879
PspN4I	GGNNCC	9 cut(s)	21, 52, 110, 140, 492, 723, 937, 2011, 2655
PspPI	GGNCC	7 cut(s)	4, 139, 608, 1106, 1640, 1975, 2391
PsuI	RGATCY	4 cut(s)	490, 935, 2009, 2743
PvuI	CGATCG	1 cut(s)	91
RruI	TCGCGA	2 cut(s)	87, 2567
RsaI	GTAC	7 cut(s)	738, 1329, 1608, 1666, 1708, 2048, 2824
RsaNI	GTAC	7 cut(s)	737, 1328, 1607, 1665, 1707, 2047, 2823
RseI	CAYNNNNRTG	2 cut(s)	745, 1672
SacI	GAGCTC	2 cut(s)	287, 424
SacII	CCGCGG	1 cut(s)	133
SapI	GCTCTTC	2 cut(s)	2490, 2760
SaqAI	TTAA	3 cut(s)	1289, 1929, 2906
Sau96I	GGNCC	7 cut(s)	4, 139, 608, 1106, 1640, 1975, 2391
SchI	GAGTC	1 cut(s)	674
ScrFI	CCNGG	8 cut(s)	137, 375, 401, 436, 933, 1208, 1638, 1881
SduI	GDGCHC	6 cut(s)	287, 359, 414, 424, 435, 2725
SfcI	CTRYAG	3 cut(s)	967, 1086, 1101
Sfr303I	CCGCGG	1 cut(s)	133
SgrBI	CCGCGG	1 cut(s)	133
SinI	GGWCC	4 cut(s)	139, 1106, 1640, 2391
SmiMI	CAYNNNNRTG	2 cut(s)	745, 1672
SmlI	CTYRAG	5 cut(s)	361, 1804, 1928, 1964, 2558
SmoI	CTYRAG	5 cut(s)	361, 1804, 1928, 1964, 2558
SspI	AATATT	3 cut(s)	1412, 2431, 2813
SspMI	CTAG	8 cut(s)	68, 120, 461, 1037, 1226, 1790, 1841, 1856
SstI	GAGCTC	2 cut(s)	287, 424
StyD4I	CCNGG	8 cut(s)	135, 373, 399, 434, 931, 1206, 1636, 1879
StyI	CCWWGG	2 cut(s)	2035, 2213
TaaI	ACNGT	7 cut(s)	517, 901, 971, 1435, 1525, 2051, 2678
TaiI	ACGT	7 cut(s)	586, 1031, 1225, 1275, 2791, 2828, 2894
TaqI	TCGA	7 cut(s)	36, 80, 414, 656, 945, 1419, 1519
TaqII	GACCGA	1 cut(s)	286
TatI	WGTACW	2 cut(s)	1327, 1606
TauI	GCSGC	5 cut(s)	135, 162, 263, 266, 454
TfiI	GAWTC	7 cut(s)	82, 988, 1011, 1371, 1571, 2591, 2796
Tru1I	TTAA	3 cut(s)	1289, 1929, 2906
Tru9I	TTAA	3 cut(s)	1289, 1929, 2906
TscAI	CASTG	7 cut(s)	747, 906, 916, 1021, 1989, 2519, 2766
TseFI	GTSAC	4 cut(s)	2334, 2399, 2510, 2873
TseI	GCWGC	5 cut(s)	956, 1633, 2240, 2770, 2861
Tsp45I	GTSAC	4 cut(s)	2334, 2399, 2510, 2873
TspGWI	ACGGA	4 cut(s)	121, 220, 432, 1343
TspRI	CASTG	7 cut(s)	747, 906, 916, 1021, 1989, 2519, 2766
Van91I	CCANNNNNTGG	2 cut(s)	2504, 2909
Vha464I	CTTAAG	1 cut(s)	1928
VneI	GTGCAC	1 cut(s)	2721
VpaK11BI	GGWCC	4 cut(s)	139, 1106, 1640, 2391
VspI	ATTAAT	1 cut(s)	1289
XapI	RAATTY	6 cut(s)	1157, 1511, 1612, 1678, 1762, 2931
XceI	RCATGY	1 cut(s)	2400
XmnI	GAANNNNTTC	4 cut(s)	382, 1475, 1682, 2484
XspI	CTAG	8 cut(s)	68, 120, 461, 1037, 1226, 1790, 1841, 1856
ZraI	GACGTC	1 cut(s)	1273
Zsp2I	ATGCAT	4 cut(s)	1098, 1204, 2446, 2605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.