Rw2G004730

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0013103
Physical Location & Seq
Reverse (-)
4461650 .. 4465692
4043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G004730.1

Sequence Viewer

Length: 1629 bp
ATGAAGAAGACCTCGAAAGGCGAGTCTGCATTCTACGCGCCGATTCCGGCCAACCCCGACCACCCCCAACACGTCGTCGTTTTAACTCATTACCGCGGCCCCTCTCCCGACTACCACGAACGACGTCGTCTCCGCCTCTGCGTATCCACCACCGTCGCTTTCGTCCTCCTCTCCGCCGCCGCGTTCTTCCTCTTCCCCTCCGACCCGGCCCTAGAGCTCGCCCGGATCCACCTCAACCACGTCGGAGTCCACTCGTCGCCGAAGCTCACTCTGGACCTATCGTTCTCGCTGACGATCAGGGTCCGGAATCGCGACTTCTTCTCTCTGGACTACGACTCGCTGGTGGTCAAAATCGGGTACCGGGGGAGAGAGCTAGGGTTTGTGAGCTCGGCCGGCGGGCGCGTGAGGGCCAGAGGGTCGTCGTACGTGAACGCAACGCTCGTGCTGGATGGGCTGGAGGTCATTCACGACGTGTTTTACTTGCTTGAAGATTTGGCTAGGGGTGTGATTCCCTTTGATACTGATACTGAGGTGGATGGAACTGTTGGGCTCTTTTTCTTCAAAATTCCTATCAAGGGAAGAGCTTCGTGTGAGGTGTATGTGAATACAAACAATCAGACAGTTGTTCGTCAAGATTGTTACCCTGAGGAGTTAAGGCTTTCATGTATAAATACACAAACAAGGGGCCGAGGAACCCAAAGCAAACTGAGAAAAACCAAACATTTCCAATGTCCCCCAAAACCACTCAACCTAGCCAACAGATCCAGCGATCGGGAAGACGAACGGCGTCATCGGCTTCGACGCTGCCGTGAACCACCGCATCATAAGGCTGATAAGCACAGGAAGTCTAAGAAGAAGAAGAAGAAGAGAAGTGAGAAGCTGAAGTTGAACGAGGAGGAGGCTAACAAGTCTCTGTACATATGTCACATTGAGCACCACCCTGGAAGGTGGGTCGCTTATGTTGTCCGCGCCATCAACTTGTCCGATTTGTTGTTGTCATCAGAAGACGATGATGGTTTGCAATTACGGCAAGTGGGTTATAAGGCCGGGGATGAACTCCCGGGGTCTGTGGGTTGCGGTGTGTGGGGCTCCCGGATTGTTTTCGCCGCCGGCATGAAACCCTGCGGCCTCTCTTCTATGTGCCAACGCGGCCCTTTTCCTTTTGTAAACAAAGCTTTGGTCCTGGACCTGCCGGCGGGTGCTGATGACAAGAAGAAGATAATGTTTGCCTATAGTTTTGGTCGTTGGTATCTAGGAGTTTATCTTATGTCCTTGGAAGAAAATCAAGAATCGATCACCCGAATTGGTGATTTTCAGCTGCCAAGGTTGCCTCAGGAATATGAATTTGCACAAAGATGTTATTTTGTCCATATAGGAGGTCAGAAAGCCTGCATTGTTGCCCCCGAATTGGTTAGGCCATATAAACAAGGACCTGATATTAACGAGGCTGGGACTCATAGGACACAGGGTGTTGCCATACCATTTCAATTTGAAGTTGATATCACCAAGGTCGACAAGGACGAGAAGAATTGTTTGACCCTCCAATTCATGCCTACTCGTATCTTCGAATTCTATACCAACCCGTCCACTTTTCCTGATCCTGAAGCAGAAGGTTGCTTTGTGCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

542

Amino Acids

61.43

Weight (kDa)

9.06

Isoelectric Point (pI)

44.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 98 - 192 6.7e-11 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013103)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13270
fragaria_vesca FvH4_1g04970
malus_domestica MD02G1048400.v1.1 MD15G1186800.v1.1
prunus_persica Prupe.7G229800_v2.0.a1
pyrus_communis pycom02g04060 pycom15g16730
rosa_chinensis RchiOBHm_Chr2g0090601
rosa_laevigata RLG00000016123
rosa_multiflora Rmu_sc0020367.1_g000001 Rmu_sc0040185.1_g000001
rosa_roxburghii Rroxscaffold_2G00151000
rosa_rugosa Rorug02G0009300
rosa_samantha Rh2AG054600 Rh2BG053800 Rh2CG056000 Rh2DG054900
rosa_wichuraiana Rw2G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1041
AatII GACGTC 1 cut(s) 127
Acc36I ACCTGC 1 cut(s) 1197
Acc65I GGTACC 1 cut(s) 357
AccB1I GGYRCC 1 cut(s) 357
AccI GTMKAC 1 cut(s) 1512
AccII CGCG 7 cut(s) 38, 96, 182, 312, 402, 969, 1149
AccIII TCCGGA 1 cut(s) 303
AclWI GGATC 4 cut(s) 220, 233, 756, 1592
AcoI YGGCCR 2 cut(s) 48, 390
AcsI RAATTY 3 cut(s) 564, 1343, 1568
AcuI CTGAAG 2 cut(s) 902, 1623
AcyI GRCGYC 2 cut(s) 124, 787
AdeI CACNNNGTG 2 cut(s) 472, 1469
AfaI GTAC 3 cut(s) 359, 425, 917
AfiI CCNNNNNNNGG 4 cut(s) 575, 771, 1195, 1408
AflIII ACRYGT 2 cut(s) 70, 471
AgsI TTSAA 5 cut(s) 488, 562, 889, 1487, 1493
AjiI CACGTC 3 cut(s) 73, 241, 472
AjnI CCWGG 2 cut(s) 940, 1182
AloI GAACNNNNNNTCC 2 cut(s) 266, 298
AluBI AGCT 8 cut(s) 217, 265, 373, 387, 584, 880, 1175, 1318
AluI AGCT 8 cut(s) 217, 265, 373, 387, 584, 880, 1175, 1318
Alw21I GWGCWC 3 cut(s) 219, 389, 936
Alw26I GTCTC 2 cut(s) 134, 915
AlwI GGATC 4 cut(s) 220, 233, 756, 1592
Ama87I CYCGRG 1 cut(s) 1060
Aor13HI TCCGGA 1 cut(s) 303
ApeKI GCWGC 2 cut(s) 804, 1318
ApoI RAATTY 3 cut(s) 564, 1343, 1568
ArsI GACNNNNNNTTYG 4 cut(s) 8, 40, 1164, 1196
Asp700I GAANNNNTTC 1 cut(s) 583
Asp718I GGTACC 1 cut(s) 357
AspLEI GCGC 3 cut(s) 40, 402, 971
AsuC2I CCSGG 7 cut(s) 206, 223, 362, 1048, 1061, 1062, 1093
AsuHPI GGTGA 3 cut(s) 1288, 1319, 1495
AsuII TTCGAA 1 cut(s) 1566
AvaI CYCGRG 1 cut(s) 1060
AvaII GGWCC 5 cut(s) 274, 301, 1180, 1186, 1430
AxyI CCTNAGG 2 cut(s) 645, 1332
BaeI ACNNNNGTAYC 2 cut(s) 516, 549
BamHI GGATCC 1 cut(s) 225
BanI GGYRCC 1 cut(s) 357
BanII GRGCYC 4 cut(s) 219, 389, 552, 1091
BauI CACGAG 1 cut(s) 440
BbsI GAAGAC 3 cut(s) 14, 783, 1011
Bbv12I GWGCWC 3 cut(s) 219, 389, 936
BbvI GCAGC 2 cut(s) 791, 1305
BccI CCATC 4 cut(s) 443, 530, 980, 1007
BceAI ACGGC 3 cut(s) 792, 800, 1043
BciT130I CCWGG 2 cut(s) 942, 1184
BciVI GTATCC 1 cut(s) 154
BcnI CCSGG 7 cut(s) 206, 223, 362, 1048, 1061, 1062, 1093
BcoDI GTCTC 2 cut(s) 134, 915
BfaI CTAG 5 cut(s) 212, 374, 498, 752, 1253
BfmI CTRYAG 1 cut(s) 1231
BfuAI ACCTGC 1 cut(s) 1197
BfuI GTATCC 1 cut(s) 154
BglI GCCNNNNNGGC 1 cut(s) 1149
BisI GCNGC 8 cut(s) 97, 177, 180, 805, 1107, 1126, 1150, 1319
BlsI GCNGC 8 cut(s) 98, 178, 181, 806, 1108, 1127, 1151, 1320
Bme1390I CCNGG 9 cut(s) 206, 223, 362, 942, 1048, 1061, 1062, 1093, 1184
Bme18I GGWCC 5 cut(s) 274, 301, 1180, 1186, 1430
BmeT110I CYCGRG 1 cut(s) 1060
BmgBI CACGTC 3 cut(s) 73, 241, 472
BmiI GGNNCC 7 cut(s) 100, 227, 302, 359, 686, 694, 1090
BmrFI CCNGG 9 cut(s) 206, 223, 362, 942, 1048, 1061, 1062, 1093, 1184
BmsI GCATC 1 cut(s) 829
BpiI GAAGAC 3 cut(s) 14, 783, 1011
BpmI CTGGAG 1 cut(s) 476
Bpu14I TTCGAA 1 cut(s) 1566
BpuMI CCSGG 7 cut(s) 206, 223, 362, 1048, 1061, 1062, 1093
Bsa29I ATCGAT 1 cut(s) 1292
BsaAI YACGTR 1 cut(s) 427
BsaHI GRCGYC 2 cut(s) 124, 787
BsaWI WCCGGW 1 cut(s) 303
BsaXI ACNNNNNCTCC 2 cut(s) 114, 144
Bsc4I CCNNNNNNNGG 4 cut(s) 575, 771, 1195, 1408
Bse118I RCCGGY 3 cut(s) 392, 1109, 1192
Bse21I CCTNAGG 2 cut(s) 645, 1332
BseAI TCCGGA 1 cut(s) 303
BseBI CCWGG 2 cut(s) 942, 1184
BseCI ATCGAT 1 cut(s) 1292
BseGI GGATG 3 cut(s) 454, 541, 1057
BseLI CCNNNNNNNGG 4 cut(s) 575, 771, 1195, 1408
BseMII CTCAG 4 cut(s) 519, 636, 698, 1346
BseRI GAGGAG 4 cut(s) 158, 662, 908, 911
BseX3I CGGCCG 1 cut(s) 390
BseXI GCAGC 2 cut(s) 791, 1305
BseYI CCCAGC 1 cut(s) 1448
Bsh1236I CGCG 7 cut(s) 38, 96, 182, 312, 402, 969, 1149
Bsh1285I CGRYCG 2 cut(s) 393, 772
BshNI GGYRCC 1 cut(s) 357
BshVI ATCGAT 1 cut(s) 1292
BsiEI CGRYCG 2 cut(s) 393, 772
BsiHKAI GWGCWC 3 cut(s) 219, 389, 936
BsiHKCI CYCGRG 1 cut(s) 1060
BsiWI CGTACG 1 cut(s) 423
BslFI GGGAC 2 cut(s) 717, 1465
BslI CCNNNNNNNGG 4 cut(s) 575, 771, 1195, 1408
BsmAI GTCTC 2 cut(s) 134, 915
BsmBI CGTCTC 1 cut(s) 134
BsmFI GGGAC 2 cut(s) 717, 1465
BsmI GAATGC 1 cut(s) 29
BsoBI CYCGRG 1 cut(s) 1060
Bsp119I TTCGAA 1 cut(s) 1566
Bsp1286I GDGCHC 5 cut(s) 219, 389, 552, 936, 1091
Bsp13I TCCGGA 1 cut(s) 303
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
Bsp68I TCGCGA 1 cut(s) 312
BspCNI CTCAG 4 cut(s) 520, 637, 699, 1345
BspDI ATCGAT 1 cut(s) 1292
BspEI TCCGGA 1 cut(s) 303
BspFNI CGCG 7 cut(s) 38, 96, 182, 312, 402, 969, 1149
BspLI GGNNCC 7 cut(s) 100, 227, 302, 359, 686, 694, 1090
BspMI ACCTGC 1 cut(s) 1197
BspPI GGATC 4 cut(s) 220, 233, 756, 1592
BspQI GCTCTTC 1 cut(s) 574
BspT104I TTCGAA 1 cut(s) 1566
BspT107I GGYRCC 1 cut(s) 357
BsrFI RCCGGY 3 cut(s) 392, 1109, 1192
BsrGI TGTACA 1 cut(s) 915
BssAI RCCGGY 3 cut(s) 392, 1109, 1192
BssMI GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
BssNI GRCGYC 2 cut(s) 124, 787
BssSI CACGAG 1 cut(s) 440
BssT1I CCWWGG 3 cut(s) 1272, 1322, 1506
Bst2BI CACGAG 1 cut(s) 440
Bst2UI CCWGG 2 cut(s) 942, 1184
Bst4CI ACNGT 3 cut(s) 154, 544, 622
Bst6I CTCTTC 4 cut(s) 197, 574, 860, 1138
BstACI GRCGYC 2 cut(s) 124, 787
BstAUI TGTACA 1 cut(s) 915
BstBAI YACGTR 1 cut(s) 427
BstBI TTCGAA 1 cut(s) 1566
BstC8I GCNNGC 6 cut(s) 219, 394, 398, 1111, 1194, 1390
BstDEI CTNAG 5 cut(s) 528, 645, 707, 849, 1332
BstDSI CCRYGG 1 cut(s) 94
BstF5I GGATG 3 cut(s) 454, 541, 1057
BstFNI CGCG 7 cut(s) 38, 96, 182, 312, 402, 969, 1149
BstHHI GCGC 3 cut(s) 40, 402, 971
BstKTI GATC 6 cut(s) 228, 297, 764, 772, 1296, 1600
BstMAI GTCTC 2 cut(s) 134, 915
BstMBI GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
BstMCI CGRYCG 2 cut(s) 393, 772
BstMWI GCNNNNNNNGC 7 cut(s) 35, 393, 451, 793, 1027, 1149, 1327
BstNI CCWGG 2 cut(s) 942, 1184
BstSCI CCNGG 9 cut(s) 204, 221, 360, 940, 1046, 1059, 1060, 1091, 1182
BstSFI CTRYAG 1 cut(s) 1231
BstUI CGCG 7 cut(s) 38, 96, 182, 312, 402, 969, 1149
BstV1I GCAGC 2 cut(s) 791, 1305
BstV2I GAAGAC 3 cut(s) 14, 783, 1011
BstX2I RGATCY 2 cut(s) 225, 761
BstYI RGATCY 2 cut(s) 225, 761
BstZI CGGCCG 1 cut(s) 390
Bsu15I ATCGAT 1 cut(s) 1292
Bsu36I CCTNAGG 2 cut(s) 645, 1332
BsuI GTATCC 1 cut(s) 154
BsuTUI ATCGAT 1 cut(s) 1292
BtgI CCRYGG 1 cut(s) 94
BtrI CACGTC 3 cut(s) 73, 241, 472
BtsCI GGATG 3 cut(s) 454, 541, 1057
BtuMI TCGCGA 1 cut(s) 312
BveI ACCTGC 1 cut(s) 1197
Cac8I GCNNGC 6 cut(s) 219, 394, 398, 1111, 1194, 1390
CfoI GCGC 3 cut(s) 40, 402, 971
Cfr10I RCCGGY 3 cut(s) 392, 1109, 1192
Cfr42I CCGCGG 1 cut(s) 97
Cfr9I CCCGGG 1 cut(s) 1060
ClaI ATCGAT 1 cut(s) 1292
CseI GACGC 2 cut(s) 776, 810
Csp6I GTAC 3 cut(s) 358, 424, 916
CviAII CATG 3 cut(s) 663, 1114, 1549
CviQI GTAC 3 cut(s) 358, 424, 916
DdeI CTNAG 5 cut(s) 528, 645, 707, 849, 1332
DpnI GATC 6 cut(s) 227, 296, 763, 771, 1295, 1599
DpnII GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
DraIII CACNNNGTG 2 cut(s) 472, 1469
EaeI YGGCCR 2 cut(s) 48, 390
EagI CGGCCG 1 cut(s) 390
Eam1104I CTCTTC 4 cut(s) 197, 574, 860, 1138
EarI CTCTTC 4 cut(s) 197, 574, 860, 1138
EciI GGCGGA 2 cut(s) 122, 163
Ecl136II GAGCTC 2 cut(s) 217, 387
EclXI CGGCCG 1 cut(s) 390
Eco130I CCWWGG 3 cut(s) 1272, 1322, 1506
Eco24I GRGCYC 4 cut(s) 219, 389, 552, 1091
Eco32I GATATC 1 cut(s) 1501
Eco47I GGWCC 5 cut(s) 274, 301, 1180, 1186, 1430
Eco52I CGGCCG 1 cut(s) 390
Eco53kI GAGCTC 2 cut(s) 217, 387
Eco57I CTGAAG 2 cut(s) 902, 1623
Eco81I CCTNAGG 2 cut(s) 645, 1332
Eco88I CYCGRG 1 cut(s) 1060
EcoICRI GAGCTC 2 cut(s) 217, 387
EcoO109I RGGNCCY 1 cut(s) 1430
EcoRI GAATTC 1 cut(s) 1568
EcoRII CCWGG 2 cut(s) 940, 1182
EcoRV GATATC 1 cut(s) 1501
EcoT14I CCWWGG 3 cut(s) 1272, 1322, 1506
EcoT38I GRGCYC 4 cut(s) 219, 389, 552, 1091
ErhI CCWWGG 3 cut(s) 1272, 1322, 1506
Esp3I CGTCTC 1 cut(s) 134
FaeI CATG 3 cut(s) 666, 1117, 1552
FaqI GGGAC 2 cut(s) 717, 1465
FatI CATG 3 cut(s) 662, 1113, 1548
FauI CCCGC 2 cut(s) 389, 1189
FauNDI CATATG 1 cut(s) 920
FblI GTMKAC 1 cut(s) 1512
Fnu4HI GCNGC 8 cut(s) 97, 177, 180, 805, 1107, 1126, 1150, 1319
FokI GGATG 3 cut(s) 461, 548, 1064
FriOI GRGCYC 4 cut(s) 219, 389, 552, 1091
Fsp4HI GCNGC 8 cut(s) 97, 177, 180, 805, 1107, 1126, 1150, 1319
FspBI CTAG 5 cut(s) 212, 374, 498, 752, 1253
GlaI GCGC 3 cut(s) 39, 401, 970
GluI GCNGC 8 cut(s) 97, 177, 180, 805, 1107, 1126, 1150, 1319
GsaI CCCAGC 1 cut(s) 1452
GsuI CTGGAG 1 cut(s) 476
HgaI GACGC 2 cut(s) 776, 810
HhaI GCGC 3 cut(s) 40, 402, 971
Hin1I GRCGYC 2 cut(s) 124, 787
Hin1II CATG 3 cut(s) 666, 1117, 1552
Hin6I GCGC 3 cut(s) 38, 400, 969
HinP1I GCGC 3 cut(s) 38, 400, 969
HincII GTYRAC 1 cut(s) 1513
HindII GTYRAC 1 cut(s) 1513
HindIII AAGCTT 1 cut(s) 1173
HinfI GANTC 8 cut(s) 23, 43, 246, 307, 335, 508, 1289, 1453
HphI GGTGA 3 cut(s) 1288, 1319, 1495
Hpy166II GTNNAC 6 cut(s) 250, 430, 812, 1168, 1513, 1587
Hpy188I TCNGA 6 cut(s) 202, 245, 618, 985, 1003, 1383
Hpy8I GTNNAC 6 cut(s) 250, 430, 812, 1168, 1513, 1587
HpyAV CCTTC 2 cut(s) 939, 1604
HpyCH4III ACNGT 3 cut(s) 154, 544, 622
HpyCH4IV ACGT 5 cut(s) 72, 124, 240, 426, 471
HpyCH4V TGCA 4 cut(s) 29, 1021, 1349, 1392
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 393, 451, 793, 1027, 1149, 1327
HpyF3I CTNAG 5 cut(s) 528, 645, 707, 849, 1332
HpySE526I ACGT 5 cut(s) 72, 124, 240, 426, 471
Hsp92I GRCGYC 2 cut(s) 124, 787
Hsp92II CATG 3 cut(s) 666, 1117, 1552
HspAI GCGC 3 cut(s) 38, 400, 969
Kpn2I TCCGGA 1 cut(s) 303
KpnI GGTACC 1 cut(s) 361
KroI GCCGGC 3 cut(s) 392, 1109, 1192
KroNI GCCGGC 3 cut(s) 394, 1111, 1194
KspI CCGCGG 1 cut(s) 97
Kzo9I GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
LguI GCTCTTC 1 cut(s) 574
LmnI GCTCC 1 cut(s) 1094
Lsp1109I GCAGC 2 cut(s) 791, 1305
LweI GCATC 1 cut(s) 829
MaeI CTAG 5 cut(s) 212, 374, 498, 752, 1253
MaeII ACGT 5 cut(s) 72, 124, 240, 426, 471
MaeIII GTNAC 2 cut(s) 638, 923
MalI GATC 6 cut(s) 227, 296, 763, 771, 1295, 1599
MboI GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
MflI RGATCY 2 cut(s) 225, 761
MhlI GDGCHC 5 cut(s) 219, 389, 552, 936, 1091
MluCI AATT 9 cut(s) 564, 1022, 1302, 1343, 1406, 1487, 1528, 1544, 1568
MlyI GAGTC 4 cut(s) 32, 255, 329, 1447
MmeI TCCRAC 2 cut(s) 223, 225
MroI TCCGGA 1 cut(s) 303
MroNI GCCGGC 3 cut(s) 392, 1109, 1192
MroXI GAANNNNTTC 1 cut(s) 583
MseI TTAA 3 cut(s) 83, 653, 1440
MslI CAYNNNNRTG 1 cut(s) 1354
MspA1I CMGCKG 2 cut(s) 96, 1318
MspR9I CCNGG 9 cut(s) 206, 223, 362, 942, 1048, 1061, 1062, 1093, 1184
Mva1269I GAATGC 1 cut(s) 29
MvaI CCWGG 2 cut(s) 942, 1184
MvnI CGCG 7 cut(s) 38, 96, 182, 312, 402, 969, 1149
MwoI GCNNNNNNNGC 7 cut(s) 35, 393, 451, 793, 1027, 1149, 1327
NaeI GCCGGC 3 cut(s) 394, 1111, 1194
NciI CCSGG 7 cut(s) 206, 223, 362, 1048, 1061, 1062, 1093
NdeI CATATG 1 cut(s) 920
NdeII GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
NgoMIV GCCGGC 3 cut(s) 392, 1109, 1192
NlaIII CATG 3 cut(s) 666, 1117, 1552
NlaIV GGNNCC 7 cut(s) 100, 227, 302, 359, 686, 694, 1090
NmeAIII GCCGAG 2 cut(s) 368, 713
NmuCI GTSAC 1 cut(s) 923
NruI TCGCGA 1 cut(s) 312
NspV TTCGAA 1 cut(s) 1566
PciSI GCTCTTC 1 cut(s) 574
PcsI WCGNNNNNNNCGW 3 cut(s) 438, 805, 1518
PctI GAATGC 1 cut(s) 29
PdiI GCCGGC 3 cut(s) 394, 1111, 1194
PdmI GAANNNNTTC 1 cut(s) 583
PfeI GAWTC 4 cut(s) 43, 307, 508, 1289
Pfl23II CGTACG 1 cut(s) 423
PflFI GACNNNGTC 1 cut(s) 126
PfoI TCCNGGA 2 cut(s) 1091, 1182
PkrI GCNGC 8 cut(s) 98, 178, 181, 806, 1108, 1127, 1151, 1320
Ple19I CGATCG 1 cut(s) 772
PleI GAGTC 4 cut(s) 31, 254, 329, 1447
PpsI GAGTC 4 cut(s) 31, 254, 329, 1447
Ppu21I YACGTR 1 cut(s) 427
PpuMI RGGWCCY 1 cut(s) 1430
PsiI TTATAA 1 cut(s) 1041
Psp124BI GAGCTC 2 cut(s) 219, 389
Psp5II RGGWCCY 1 cut(s) 1430
Psp6I CCWGG 2 cut(s) 940, 1182
PspFI CCCAGC 1 cut(s) 1448
PspGI CCWGG 2 cut(s) 940, 1182
PspLI CGTACG 1 cut(s) 423
PspN4I GGNNCC 7 cut(s) 100, 227, 302, 359, 686, 694, 1090
PspPPI RGGWCCY 1 cut(s) 1430
PsuI RGATCY 2 cut(s) 225, 761
PsyI GACNNNGTC 1 cut(s) 126
PvuI CGATCG 1 cut(s) 772
PvuII CAGCTG 1 cut(s) 1318
RruI TCGCGA 1 cut(s) 312
RsaI GTAC 3 cut(s) 359, 425, 917
RsaNI GTAC 3 cut(s) 358, 424, 916
RseI CAYNNNNRTG 1 cut(s) 1354
SacI GAGCTC 2 cut(s) 219, 389
SacII CCGCGG 1 cut(s) 97
SalI GTCGAC 1 cut(s) 1511
SapI GCTCTTC 1 cut(s) 574
SaqAI TTAA 3 cut(s) 83, 653, 1440
SatI GCNGC 8 cut(s) 97, 177, 180, 805, 1107, 1126, 1150, 1319
Sau3AI GATC 6 cut(s) 225, 294, 761, 769, 1293, 1597
SchI GAGTC 4 cut(s) 32, 255, 329, 1447
ScrFI CCNGG 9 cut(s) 206, 223, 362, 942, 1048, 1061, 1062, 1093, 1184
SduI GDGCHC 5 cut(s) 219, 389, 552, 936, 1091
SfaNI GCATC 1 cut(s) 829
SfcI CTRYAG 1 cut(s) 1231
Sfr303I CCGCGG 1 cut(s) 97
SfuI TTCGAA 1 cut(s) 1566
SgrBI CCGCGG 1 cut(s) 97
SinI GGWCC 5 cut(s) 274, 301, 1180, 1186, 1430
SmaI CCCGGG 1 cut(s) 1062
SmiMI CAYNNNNRTG 1 cut(s) 1354
Sse9I AATT 9 cut(s) 564, 1022, 1302, 1343, 1406, 1487, 1528, 1544, 1568
SspMI CTAG 5 cut(s) 212, 374, 498, 752, 1253
SstI GAGCTC 2 cut(s) 219, 389
StyD4I CCNGG 9 cut(s) 204, 221, 360, 940, 1046, 1059, 1060, 1091, 1182
StyI CCWWGG 3 cut(s) 1272, 1322, 1506
TaaI ACNGT 3 cut(s) 154, 544, 622
TaiI ACGT 5 cut(s) 75, 127, 243, 429, 474
TaqI TCGA 5 cut(s) 14, 799, 1292, 1512, 1566
TasI AATT 9 cut(s) 564, 1022, 1302, 1343, 1406, 1487, 1528, 1544, 1568
TatI WGTACW 1 cut(s) 915
TauI GCSGC 6 cut(s) 99, 179, 182, 1109, 1128, 1152
TfiI GAWTC 4 cut(s) 43, 307, 508, 1289
Tru1I TTAA 3 cut(s) 83, 653, 1440
Tru9I TTAA 3 cut(s) 83, 653, 1440
TseFI GTSAC 1 cut(s) 923
TseI GCWGC 2 cut(s) 804, 1318
Tsp45I GTSAC 1 cut(s) 923
TspDTI ATGAA 6 cut(s) 17, 651, 1068, 1130, 1356, 1537
TspMI CCCGGG 1 cut(s) 1060
Tth111I GACNNNGTC 1 cut(s) 126
VpaK11BI GGWCC 5 cut(s) 274, 301, 1180, 1186, 1430
XapI RAATTY 3 cut(s) 564, 1343, 1568
XmaI CCCGGG 1 cut(s) 1060
XmiI GTMKAC 1 cut(s) 1512
XmnI GAANNNNTTC 1 cut(s) 583
XspI CTAG 5 cut(s) 212, 374, 498, 752, 1253
ZraI GACGTC 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.