Rorug02G0009300

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000543
Physical Location & Seq
Forward (+)
773788 .. 777907
4120 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0009300.1

Sequence Viewer

Length: 1881 bp
ATGTTAGAACAGTTACTGATATTTACTAGAGGAGGATTAATCCTCTGGACCTGTAAAGAGCTTGGAAATGCTCTTAAAGGATCGCCGATCGACACTTTGATCCGGTCCTGTCTTTTGGAGGAACGATCTGGTGCAGCATCGTATGATTATACGGCTCCCGGGGCAGCTTACACGCTCAAATGGACCTTCCATAATGAGCTTGGCCTCGTGTTTGTTGCTGTTTACCAGAAGATCCTCCATCTCTTGTATGTGGATGATCTGCTTGCGATGGTGAAGCAGAGCTTCGCAGAGATTTATGATCCGAAAAGGACGGTGTATGATGATTTTGATGAAACTTTCCGACAACTTAGGAAGGAGGCTGAGGCTCGTGCTGAGGAGTTGAAGAAGTCCAAGCAGGTGGGTAAGCCTGTGAGTAATAGTAGGAAGCAAGGGCAGGTGCAGAAGGCTGGACTTGGAGGGGACAAGAAGAGTAATGAAGGTGGTTTGGCTAGTGATGGTGGGGATGGCAATGCTGTGAAAGGCCGTAAATTGGAGAATGGAATCTCCAATGGTAATCATGTTGCTAGCAAAGAATCTAATGTAGTTGGTACTGCTAACGGAAAAGAGAATACTAGTTCCAATCTCCGGGCTTTTGATGTAAATAAGCTTAAATCTAGATCTAAGGTTGGAAAGAAGACTGAAAAAACAGCTTCCCTTGATAGGAAGGGCTCCATGGCTGAGCCAAAAAAGAAGATAACCAAGAAAAATAGAGTTTGGGATGATTCACCTCAAGAGTCGCGTGAGTCAAAATTGGATTTTACAGATACTGTGGGTGAAGATGCAGATAACAATATTGAGGTTGTGGCAGCAGATCATGGTGAAAGTATGATGGATAGGGATGAGGATTACAGTAGTGAAAGTGAGGCTGAAGAGGAAGAGGAAGTTGGAAAGCAAAGCAAGCCTGATTCAAAAAAGAAGGGTTGGTTTTCATCTATGTTTCAGAGTATTGCAGGCAAGGCAAACTTGGAGAGGTCAGATCTGGAACCAGCTTTGAAAGCTCTCAAGGATAGGCTCATGACCAAGAATGTGGCTGAGGAGATAGCTGAGAAGCTTTGTGAATCAGTGGCAGCTAGTCTTGAGGGTAAAAAGTTGGGTTCTTTTACAAGAATATCTTCTACAGTTCAGGGAGCAATGGAAGAAGCTCTTGTTCGTATTTTAACTCCTAGGCGCTCTATTGATATACTGAGGGATGTGCATGCTGCCAAGGAGCAGGGCAAGCCTTATGTTGTTGTTTTTGTTGGTGTCAATGGAGTCGGGAAATCTACTAATTTGGCCAAGGTTGCCTATTGGCTCCAGCAGCATCAGGTCAGTGTTATGATGGCTGCATGTGATACATTCCGATCAGGGGCTGTTGAGCAGTTGCGTACTCATGCACGTAGACTCCAGATCCCTATTTTTGAGAAGGGATATGAGAAAGATCCTGCTGTTGTTGCAAAGGAAGCAATCCAGGAGGCCAAACTCAATGGTTCTGATGTGGTTCTTGTTGATACAGCTGGTCGAATGCAGGATAATGAACCATTAATGAGGGCATTGTCAAAGCTTATCTACATTAACAAGCCAGATCTTGTCTTGTTTGTTGGAGAGGCACTGGTTGGGAATGATGCTGTCGATCAGCTTTCAAAGTTTAATCAGAAACTGGGTGATCTCTCACCTTCGCCAAACCCCAGATTGATAGATGGAATATTGCTCACCAAGTTTGATACCATTGATGATAAGGTTGGAGCTGCGCTGTCCATGGTTTACATATCTGGAGCCCCGGTCATGTTTGTTGGGTGCGGGCAATCCTACACAGACCTCAAAAAGCTGAATGTCAAATCGATTGTCAAGACTCTCCTGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

626

Amino Acids

68.75

Weight (kDa)

8.25

Isoelectric Point (pI)

35.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SRP-alpha_N PF04086 28 - 303 9.9e-63 Signal recognition particle, alpha subunit, N-terminal
SRP54_N PF02881 322 - 388 9e-09 SRP54-type protein, helical bundle domain
SRP54 PF00448 421 - 625 3.5e-57 SRP54-type protein, GTPase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000543)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72050 AT1G72050 AT1G72050 AT1G72050
fragaria_vesca FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g04960 FvH4_1g27520 FvH4_1g27520 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190 FvH4_4g26190
malus_domestica MD02G1048300.v1.1 MD15G1186600.v1.1 MD15G1411000.v1.1
prunus_persica Prupe.1G551600_v2.0.a1 Prupe.1G551600_v2.0.a1 Prupe.1G551600_v2.0.a1 Prupe.1G551600_v2.0.a1 Prupe.7G229900_v2.0.a1 Prupe.7G229900_v2.0.a1
pyrus_communis pycom02g04050 pycom15g36580
rosa_chinensis RchiOBHm_Chr2g0090581 RchiOBHm_Chr2g0090591 RchiOBHm_Chr2g0120581 RchiOBHm_Chr5g0055971 RchiOBHm_Chr7g0228681 RchiOBHm_Chr7g0228721 RchiOBHm_Chr7g0228771
rosa_laevigata RLG00000001547 RLG00000016122 RLG00000035039
rosa_multiflora Rmu_co8222532.1_g000001 Rmu_co8474195.1_g000001 Rmu_sc0001581.1_g000005 Rmu_sc0004514.1_g000033 Rmu_sc0015624.1_g000002
rosa_roxburghii Rroxscaffold_1G00024300 Rroxscaffold_2G00151010 Rroxscaffold_3G00230860 Rroxscaffold_3G00230910
rosa_rugosa Rorug02G0009300 Rorug02G0009300 Rorug05G0296700 Rorug07G0251500 Rorug07G0251600 Rorug07G0251700 Rorug07G0251800
rosa_samantha Rh2AG054400 Rh2BG053700 Rh2CG055900 Rh2DG054800 Rh5BG378200 Rh5CG401600 Rh7AG403700 Rh7AG404000 Rh7AG404600 Rh7AG405100 Rh7BG384300 Rh7CG422800 Rh7DG399300
rosa_wichuraiana Rw2G004740 Rw2G022930 Rw5G034520 Rw7G033550 Rw7G033570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 385, 424
Acc36I ACCTGC 2 cut(s) 385, 424
AccI GTMKAC 1 cut(s) 1417
AccII CGCG 1 cut(s) 778
AciI CCGC 1 cut(s) 1815
AclWI GGATC 6 cut(s) 88, 94, 226, 293, 1420, 1451
AcoI YGGCCR 1 cut(s) 1311
AcuI CTGAAG 1 cut(s) 927
AfaI GTAC 2 cut(s) 589, 1405
AfiI CCNNNNNNNGG 4 cut(s) 529, 624, 699, 1384
AgsI TTSAA 4 cut(s) 382, 948, 1033, 1659
AhlI ACTAGT 1 cut(s) 611
AjnI CCWGG 1 cut(s) 1485
AjuI GAANNNNNNNTTGG 2 cut(s) 906, 938
AlwI GGATC 6 cut(s) 88, 94, 226, 293, 1420, 1451
AlwNI CAGNNNCTG 4 cut(s) 16, 806, 1388, 1675
Ama87I CYCGRG 1 cut(s) 158
AoxI GGCC 4 cut(s) 202, 520, 1311, 1491
ApeKI GCWGC 8 cut(s) 134, 164, 845, 1106, 1238, 1336, 1361, 1763
ArsI GACNNNNNNTTYG 2 cut(s) 1845, 1877
AseI ATTAAT 2 cut(s) 38, 1559
Asp700I GAANNNNTTC 1 cut(s) 1150
AspA2I CCTAGG 1 cut(s) 1202
AspLEI GCGC 2 cut(s) 1209, 1768
AspS9I GGNCC 3 cut(s) 48, 105, 183
AsuC2I CCSGG 4 cut(s) 159, 160, 626, 1796
AsuHPI GGTGA 7 cut(s) 283, 756, 824, 869, 1680, 1691, 1720
AsuNHI GCTAGC 1 cut(s) 563
AvaI CYCGRG 1 cut(s) 158
AvaII GGWCC 3 cut(s) 48, 105, 183
AvrII CCTAGG 1 cut(s) 1202
BalI TGGCCA 1 cut(s) 1313
BanII GRGCYC 2 cut(s) 710, 1795
BauI CACGAG 2 cut(s) 206, 366
BbsI GAAGAC 1 cut(s) 680
BbvCI CCTCAGC 3 cut(s) 360, 372, 1071
BbvI GCAGC 8 cut(s) 146, 176, 857, 1118, 1225, 1348, 1348, 1750
BccI CCATC 7 cut(s) 246, 262, 488, 497, 862, 1351, 1709
BceAI ACGGC 2 cut(s) 168, 507
BciT130I CCWGG 1 cut(s) 1487
BcnI CCSGG 4 cut(s) 159, 160, 626, 1796
BcuI ACTAGT 1 cut(s) 611
BfaI CTAG 7 cut(s) 27, 489, 564, 612, 654, 1110, 1203
BfmI CTRYAG 1 cut(s) 1155
BfoI RGCGCY 1 cut(s) 1210
BfuAI ACCTGC 2 cut(s) 385, 424
BglII AGATCT 3 cut(s) 656, 1015, 1600
BisI GCNGC 8 cut(s) 135, 165, 846, 1107, 1239, 1337, 1362, 1764
BlnI CCTAGG 1 cut(s) 1202
BlpI GCTNAGC 1 cut(s) 717
BlsI GCNGC 8 cut(s) 136, 166, 847, 1108, 1240, 1338, 1363, 1765
Bme1390I CCNGG 5 cut(s) 159, 160, 626, 1487, 1796
Bme18I GGWCC 3 cut(s) 48, 105, 183
BmeT110I CYCGRG 1 cut(s) 158
BmgT120I GGNCC 3 cut(s) 48, 105, 183
BmiI GGNNCC 5 cut(s) 156, 709, 1023, 1331, 1792
BmrFI CCNGG 5 cut(s) 159, 160, 626, 1487, 1796
BmrI ACTGGG 1 cut(s) 1685
BmsI GCATC 4 cut(s) 146, 808, 1348, 1630
BmtI GCTAGC 1 cut(s) 567
BmuI ACTGGG 1 cut(s) 1685
BpiI GAAGAC 1 cut(s) 680
BpmI CTGGAG 3 cut(s) 1316, 1406, 1809
Bpu10I CCTNAGC 3 cut(s) 360, 372, 1071
Bpu1102I GCTNAGC 1 cut(s) 717
BpuEI CTTGAG 3 cut(s) 753, 1025, 1136
BpuMI CCSGG 4 cut(s) 159, 160, 626, 1796
Bsa29I ATCGAT 1 cut(s) 1856
BsaAI YACGTR 1 cut(s) 1415
BsaJI CCNNGG 8 cut(s) 158, 159, 711, 1202, 1242, 1314, 1773, 1794
BsaWI WCCGGW 1 cut(s) 102
BsaXI ACNNNNNCTCC 4 cut(s) 1404, 1434, 1782, 1812
Bsc4I CCNNNNNNNGG 4 cut(s) 529, 624, 699, 1384
Bse1I ACTGG 2 cut(s) 1632, 1680
Bse3DI GCAATG 2 cut(s) 514, 1176
BseBI CCWGG 1 cut(s) 1487
BseCI ATCGAT 1 cut(s) 1856
BseDI CCNNGG 8 cut(s) 158, 159, 711, 1202, 1242, 1314, 1773, 1794
BseGI GGATG 5 cut(s) 259, 508, 763, 883, 1234
BseLI CCNNNNNNNGG 4 cut(s) 529, 624, 699, 1384
BseMI GCAATG 2 cut(s) 514, 1176
BseMII CTCAG 6 cut(s) 351, 363, 708, 1062, 1074, 1214
BseNI ACTGG 2 cut(s) 1632, 1680
BseRI GAGGAG 3 cut(s) 45, 389, 1088
BseXI GCAGC 8 cut(s) 146, 176, 857, 1118, 1225, 1348, 1348, 1750
BsgI GTGCAG 2 cut(s) 153, 458
Bsh1236I CGCG 1 cut(s) 778
Bsh1285I CGRYCG 1 cut(s) 90
BshFI GGCC 4 cut(s) 204, 522, 1313, 1493
BshVI ATCGAT 1 cut(s) 1856
BsiEI CGRYCG 1 cut(s) 90
BsiHKCI CYCGRG 1 cut(s) 158
BsiSI CCGG 4 cut(s) 103, 159, 625, 1796
BslFI GGGAC 1 cut(s) 473
BslI CCNNNNNNNGG 4 cut(s) 529, 624, 699, 1384
BsmFI GGGAC 1 cut(s) 473
BsmI GAATGC 1 cut(s) 1545
BsnI GGCC 4 cut(s) 204, 522, 1313, 1493
BsoBI CYCGRG 1 cut(s) 158
Bsp1286I GDGCHC 2 cut(s) 710, 1795
Bsp1720I GCTNAGC 1 cut(s) 717
Bsp19I CCATGG 2 cut(s) 711, 1773
BspACI CCGC 1 cut(s) 1815
BspANI GGCC 4 cut(s) 204, 522, 1313, 1493
BspCNI CTCAG 6 cut(s) 352, 364, 709, 1063, 1075, 1215
BspDI ATCGAT 1 cut(s) 1856
BspFNI CGCG 1 cut(s) 778
BspHI TCATGA 1 cut(s) 1053
BspLI GGNNCC 5 cut(s) 156, 709, 1023, 1331, 1792
BspMI ACCTGC 2 cut(s) 385, 424
BspOI GCTAGC 1 cut(s) 567
BspPI GGATC 6 cut(s) 88, 94, 226, 293, 1420, 1451
BsrDI GCAATG 2 cut(s) 514, 1176
BsrI ACTGG 2 cut(s) 1632, 1680
BssECI CCNNGG 8 cut(s) 158, 159, 711, 1202, 1242, 1314, 1773, 1794
BssSI CACGAG 2 cut(s) 206, 366
BssT1I CCWWGG 5 cut(s) 711, 1202, 1242, 1314, 1773
Bst2BI CACGAG 2 cut(s) 206, 366
Bst2UI CCWGG 1 cut(s) 1487
Bst4CI ACNGT 5 cut(s) 12, 313, 808, 890, 1159
Bst6I CTCTTC 3 cut(s) 461, 903, 909
BstBAI YACGTR 1 cut(s) 1415
BstC8I GCNNGC 7 cut(s) 264, 565, 938, 991, 1236, 1256, 1817
BstDEI CTNAG 8 cut(s) 347, 360, 372, 660, 717, 1071, 1083, 1223
BstDSI CCRYGG 2 cut(s) 711, 1773
BstF5I GGATG 5 cut(s) 259, 508, 763, 883, 1234
BstFNI CGCG 1 cut(s) 778
BstH2I RGCGCY 1 cut(s) 1210
BstHHI GCGC 2 cut(s) 1209, 1768
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 9 cut(s) 161, 937, 995, 1034, 1255, 1319, 1336, 1469, 1478
BstNI CCWGG 1 cut(s) 1487
BstNSI RCATGY 2 cut(s) 1238, 1368
BstSCI CCNGG 5 cut(s) 157, 158, 624, 1485, 1794
BstSFI CTRYAG 1 cut(s) 1155
BstUI CGCG 1 cut(s) 778
BstV1I GCAGC 8 cut(s) 146, 176, 857, 1118, 1225, 1348, 1348, 1750
BstV2I GAAGAC 1 cut(s) 680
BstX2I RGATCY 6 cut(s) 231, 656, 1015, 1425, 1456, 1600
BstXI CCANNNNNNTGG 2 cut(s) 397, 1066
BstYI RGATCY 6 cut(s) 231, 656, 1015, 1425, 1456, 1600
Bsu15I ATCGAT 1 cut(s) 1856
BsuRI GGCC 4 cut(s) 204, 522, 1313, 1493
BsuTUI ATCGAT 1 cut(s) 1856
BtgI CCRYGG 2 cut(s) 711, 1773
BtgZI GCGATG 1 cut(s) 281
BtsCI GGATG 5 cut(s) 259, 508, 763, 883, 1234
BtsIMutI CAGTG 3 cut(s) 1107, 1354, 1625
BveI ACCTGC 2 cut(s) 385, 424
Cac8I GCNNGC 7 cut(s) 264, 565, 938, 991, 1236, 1256, 1817
CaiI CAGNNNCTG 4 cut(s) 16, 806, 1388, 1675
CciI TCATGA 1 cut(s) 1053
CfoI GCGC 2 cut(s) 1209, 1768
Cfr13I GGNCC 3 cut(s) 48, 105, 183
Cfr9I CCCGGG 1 cut(s) 158
ClaI ATCGAT 1 cut(s) 1856
Csp6I GTAC 2 cut(s) 588, 1404
CviAII CATG 9 cut(s) 557, 712, 854, 1054, 1235, 1365, 1409, 1774, 1801
CviQI GTAC 2 cut(s) 588, 1404
DdeI CTNAG 8 cut(s) 347, 360, 372, 660, 717, 1071, 1083, 1223
EaeI YGGCCR 1 cut(s) 1311
Eam1104I CTCTTC 3 cut(s) 461, 903, 909
EarI CTCTTC 3 cut(s) 461, 903, 909
Eco130I CCWWGG 5 cut(s) 711, 1202, 1242, 1314, 1773
Eco24I GRGCYC 2 cut(s) 710, 1795
Eco47I GGWCC 3 cut(s) 48, 105, 183
Eco57I CTGAAG 1 cut(s) 927
Eco88I CYCGRG 1 cut(s) 158
EcoRII CCWGG 1 cut(s) 1485
EcoT14I CCWWGG 5 cut(s) 711, 1202, 1242, 1314, 1773
EcoT38I GRGCYC 2 cut(s) 710, 1795
ErhI CCWWGG 5 cut(s) 711, 1202, 1242, 1314, 1773
FaeI CATG 9 cut(s) 560, 715, 857, 1057, 1238, 1368, 1412, 1777, 1804
FalI AAGNNNNNCTT 8 cut(s) 266, 298, 986, 1018, 1135, 1167, 1167, 1199
FaqI GGGAC 1 cut(s) 473
FatI CATG 9 cut(s) 556, 711, 853, 1053, 1234, 1364, 1408, 1773, 1800
FauI CCCGC 1 cut(s) 1808
FblI GTMKAC 1 cut(s) 1417
Fnu4HI GCNGC 8 cut(s) 135, 165, 846, 1107, 1239, 1337, 1362, 1764
FokI GGATG 5 cut(s) 266, 515, 770, 890, 1241
FriOI GRGCYC 2 cut(s) 710, 1795
Fsp4HI GCNGC 8 cut(s) 135, 165, 846, 1107, 1239, 1337, 1362, 1764
FspBI CTAG 7 cut(s) 27, 489, 564, 612, 654, 1110, 1203
GlaI GCGC 2 cut(s) 1208, 1767
GluI GCNGC 8 cut(s) 135, 165, 846, 1107, 1239, 1337, 1362, 1764
GsuI CTGGAG 3 cut(s) 1316, 1406, 1809
HaeII RGCGCY 1 cut(s) 1210
HaeIII GGCC 4 cut(s) 204, 522, 1313, 1493
HapII CCGG 4 cut(s) 103, 159, 625, 1796
HhaI GCGC 2 cut(s) 1209, 1768
Hin1II CATG 9 cut(s) 560, 715, 857, 1057, 1238, 1368, 1412, 1777, 1804
Hin6I GCGC 2 cut(s) 1207, 1766
HinP1I GCGC 2 cut(s) 1207, 1766
HindIII AAGCTT 3 cut(s) 644, 1088, 1577
HpaII CCGG 4 cut(s) 103, 159, 625, 1796
HphI GGTGA 7 cut(s) 283, 756, 824, 869, 1680, 1691, 1720
Hpy166II GTNNAC 3 cut(s) 223, 1418, 1780
Hpy188I TCNGA 7 cut(s) 303, 341, 981, 1015, 1379, 1510, 1671
Hpy8I GTNNAC 3 cut(s) 223, 1418, 1780
HpyAV CCTTC 8 cut(s) 196, 346, 436, 470, 697, 949, 1435, 1701
HpyCH4III ACNGT 5 cut(s) 12, 313, 808, 890, 1159
HpyCH4IV ACGT 1 cut(s) 1414
HpyCH4V TGCA 9 cut(s) 134, 439, 821, 989, 1234, 1364, 1412, 1472, 1543
HpyF10VI GCNNNNNNNGC 9 cut(s) 161, 937, 995, 1034, 1255, 1319, 1336, 1469, 1478
HpyF3I CTNAG 8 cut(s) 347, 360, 372, 660, 717, 1071, 1083, 1223
HpySE526I ACGT 1 cut(s) 1414
Hsp92II CATG 9 cut(s) 560, 715, 857, 1057, 1238, 1368, 1412, 1777, 1804
HspAI GCGC 2 cut(s) 1207, 1766
LmnI GCTCC 7 cut(s) 160, 713, 1166, 1246, 1335, 1760, 1790
Lsp1109I GCAGC 8 cut(s) 146, 176, 857, 1118, 1225, 1348, 1348, 1750
LweI GCATC 4 cut(s) 146, 808, 1348, 1630
MaeI CTAG 7 cut(s) 27, 489, 564, 612, 654, 1110, 1203
MaeII ACGT 1 cut(s) 1414
MaeIII GTNAC 1 cut(s) 12
MflI RGATCY 6 cut(s) 231, 656, 1015, 1425, 1456, 1600
MhlI GDGCHC 2 cut(s) 710, 1795
MlsI TGGCCA 1 cut(s) 1313
MluCI AATT 3 cut(s) 527, 788, 1306
MluNI TGGCCA 1 cut(s) 1313
MlyI GAGTC 5 cut(s) 782, 791, 1299, 1413, 1861
MmeI TCCRAC 5 cut(s) 364, 646, 904, 1597, 1738
Mox20I TGGCCA 1 cut(s) 1313
MroXI GAANNNNTTC 1 cut(s) 1150
MscI TGGCCA 1 cut(s) 1313
MseI TTAA 7 cut(s) 38, 75, 648, 1196, 1559, 1590, 1665
Msp20I TGGCCA 1 cut(s) 1313
MspA1I CMGCKG 1 cut(s) 1532
MspI CCGG 4 cut(s) 103, 159, 625, 1796
MspR9I CCNGG 5 cut(s) 159, 160, 626, 1487, 1796
Mva1269I GAATGC 1 cut(s) 1545
MvaI CCWGG 1 cut(s) 1487
MvnI CGCG 1 cut(s) 778
MwoI GCNNNNNNNGC 9 cut(s) 161, 937, 995, 1034, 1255, 1319, 1336, 1469, 1478
NciI CCSGG 4 cut(s) 159, 160, 626, 1796
NcoI CCATGG 2 cut(s) 711, 1773
NheI GCTAGC 1 cut(s) 563
NlaIII CATG 9 cut(s) 560, 715, 857, 1057, 1238, 1368, 1412, 1777, 1804
NlaIV GGNNCC 5 cut(s) 156, 709, 1023, 1331, 1792
NspI RCATGY 2 cut(s) 1238, 1368
PaeI GCATGC 1 cut(s) 1238
PagI TCATGA 1 cut(s) 1053
PaqCI CACCTGC 2 cut(s) 385, 424
PctI GAATGC 1 cut(s) 1545
PdmI GAANNNNTTC 1 cut(s) 1150
PfeI GAWTC 5 cut(s) 540, 572, 761, 944, 1097
PfoI TCCNGGA 1 cut(s) 1485
PkrI GCNGC 8 cut(s) 136, 166, 847, 1108, 1240, 1338, 1363, 1765
Ple19I CGATCG 1 cut(s) 90
PleI GAGTC 5 cut(s) 781, 790, 1298, 1413, 1861
PpsI GAGTC 5 cut(s) 781, 790, 1298, 1413, 1861
Ppu21I YACGTR 1 cut(s) 1415
PshBI ATTAAT 2 cut(s) 38, 1559
Psp6I CCWGG 1 cut(s) 1485
PspGI CCWGG 1 cut(s) 1485
PspN4I GGNNCC 5 cut(s) 156, 709, 1023, 1331, 1792
PspPI GGNCC 3 cut(s) 48, 105, 183
PstNI CAGNNNCTG 4 cut(s) 16, 806, 1388, 1675
PsuI RGATCY 6 cut(s) 231, 656, 1015, 1425, 1456, 1600
PvuI CGATCG 1 cut(s) 90
PvuII CAGCTG 1 cut(s) 1532
RsaI GTAC 2 cut(s) 589, 1405
RsaNI GTAC 2 cut(s) 588, 1404
SaqAI TTAA 7 cut(s) 38, 75, 648, 1196, 1559, 1590, 1665
SatI GCNGC 8 cut(s) 135, 165, 846, 1107, 1239, 1337, 1362, 1764
Sau96I GGNCC 3 cut(s) 48, 105, 183
SchI GAGTC 5 cut(s) 782, 791, 1299, 1413, 1861
ScrFI CCNGG 5 cut(s) 159, 160, 626, 1487, 1796
SduI GDGCHC 2 cut(s) 710, 1795
SfaNI GCATC 4 cut(s) 146, 808, 1348, 1630
SfcI CTRYAG 1 cut(s) 1155
SinI GGWCC 3 cut(s) 48, 105, 183
SmaI CCCGGG 1 cut(s) 160
SmlI CTYRAG 3 cut(s) 768, 1040, 1115
SmoI CTYRAG 3 cut(s) 768, 1040, 1115
SpeI ACTAGT 1 cut(s) 611
SphI GCATGC 1 cut(s) 1238
Sse9I AATT 3 cut(s) 527, 788, 1306
SsiI CCGC 1 cut(s) 1815
SspI AATATT 2 cut(s) 832, 1722
SspMI CTAG 7 cut(s) 27, 489, 564, 612, 654, 1110, 1203
StyD4I CCNGG 5 cut(s) 157, 158, 624, 1485, 1794
StyI CCWWGG 5 cut(s) 711, 1202, 1242, 1314, 1773
TaaI ACNGT 5 cut(s) 12, 313, 808, 890, 1159
TaiI ACGT 1 cut(s) 1417
TaqI TCGA 4 cut(s) 90, 1537, 1647, 1856
TasI AATT 3 cut(s) 527, 788, 1306
TfiI GAWTC 5 cut(s) 540, 572, 761, 944, 1097
Tru1I TTAA 7 cut(s) 38, 75, 648, 1196, 1559, 1590, 1665
Tru9I TTAA 7 cut(s) 38, 75, 648, 1196, 1559, 1590, 1665
TscAI CASTG 3 cut(s) 1107, 1354, 1632
TseI GCWGC 8 cut(s) 134, 164, 845, 1106, 1238, 1336, 1361, 1763
TspDTI ATGAA 4 cut(s) 345, 489, 957, 1566
TspGWI ACGGA 1 cut(s) 612
TspMI CCCGGG 1 cut(s) 158
TspRI CASTG 3 cut(s) 1107, 1354, 1632
VpaK11BI GGWCC 3 cut(s) 48, 105, 183
VspI ATTAAT 2 cut(s) 38, 1559
XbaI TCTAGA 1 cut(s) 653
XceI RCATGY 2 cut(s) 1238, 1368
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XmaI CCCGGG 1 cut(s) 158
XmaJI CCTAGG 1 cut(s) 1202
XmiI GTMKAC 1 cut(s) 1417
XmnI GAANNNNTTC 1 cut(s) 1150
XspI CTAG 7 cut(s) 27, 489, 564, 612, 654, 1110, 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.