Zinc finger protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 385, 824 |
| AccB1I | GGYRCC | 1 cut(s) | 168 |
| AciI | CCGC | 2 cut(s) | 654, 685 |
| AcoI | YGGCCR | 1 cut(s) | 291 |
| AcsI | RAATTY | 2 cut(s) | 101, 1112 |
| AcuI | CTGAAG | 3 cut(s) | 173, 588, 911 |
| AfaI | GTAC | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 62, 274, 684, 1016, 1128, 1133 |
| AflIII | ACRYGT | 1 cut(s) | 961 |
| AgsI | TTSAA | 6 cut(s) | 31, 370, 891, 983, 1097, 1194 |
| AjiI | CACGTC | 1 cut(s) | 259 |
| AjnI | CCWGG | 4 cut(s) | 348, 742, 1009, 1121 |
| AluBI | AGCT | 6 cut(s) | 92, 151, 456, 682, 785, 841 |
| AluI | AGCT | 6 cut(s) | 92, 151, 456, 682, 785, 841 |
| Alw26I | GTCTC | 2 cut(s) | 154, 412 |
| Ama87I | CYCGRG | 1 cut(s) | 413 |
| AoxI | GGCC | 3 cut(s) | 42, 291, 1124 |
| ApeKI | GCWGC | 2 cut(s) | 628, 682 |
| ApoI | RAATTY | 2 cut(s) | 101, 1112 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 411, 443, 981, 1013 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 102 |
| AspLEI | GCGC | 1 cut(s) | 194 |
| AspS9I | GGNCC | 3 cut(s) | 231, 831, 1119 |
| AsuHPI | GGTGA | 5 cut(s) | 256, 488, 602, 968, 1195 |
| AvaI | CYCGRG | 1 cut(s) | 413 |
| AvaII | GGWCC | 3 cut(s) | 231, 831, 1119 |
| BaeGI | GKGCMC | 1 cut(s) | 1154 |
| BanI | GGYRCC | 1 cut(s) | 168 |
| BbsI | GAAGAC | 1 cut(s) | 917 |
| BbvI | GCAGC | 2 cut(s) | 640, 669 |
| BccI | CCATC | 3 cut(s) | 302, 492, 608 |
| BciT130I | CCWGG | 4 cut(s) | 350, 744, 1011, 1123 |
| BcoDI | GTCTC | 2 cut(s) | 154, 412 |
| BfaI | CTAG | 2 cut(s) | 93, 567 |
| BfmI | CTRYAG | 1 cut(s) | 457 |
| BfoI | RGCGCY | 1 cut(s) | 195 |
| BfuAI | ACCTGC | 2 cut(s) | 385, 824 |
| BisI | GCNGC | 2 cut(s) | 629, 683 |
| BlsI | GCNGC | 2 cut(s) | 630, 684 |
| Bme1390I | CCNGG | 4 cut(s) | 350, 744, 1011, 1123 |
| Bme18I | GGWCC | 3 cut(s) | 231, 831, 1119 |
| BmeT110I | CYCGRG | 1 cut(s) | 413 |
| BmgBI | CACGTC | 1 cut(s) | 259 |
| BmgT120I | GGNCC | 3 cut(s) | 231, 831, 1119 |
| BmiI | GGNNCC | 2 cut(s) | 170, 832 |
| BmrFI | CCNGG | 4 cut(s) | 350, 744, 1011, 1123 |
| BmsI | GCATC | 3 cut(s) | 30, 231, 1058 |
| BpiI | GAAGAC | 1 cut(s) | 917 |
| BpuEI | CTTGAG | 2 cut(s) | 143, 371 |
| BsaI | GGTCTC | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 5 cut(s) | 140, 294, 499, 553, 1127 |
| BsaWI | WCCGGW | 1 cut(s) | 1116 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 62, 274, 684, 1016, 1128, 1133 |
| Bse118I | RCCGGY | 1 cut(s) | 228 |
| Bse1I | ACTGG | 2 cut(s) | 56, 84 |
| Bse3DI | GCAATG | 2 cut(s) | 246, 779 |
| BseBI | CCWGG | 4 cut(s) | 350, 744, 1011, 1123 |
| BseDI | CCNNGG | 5 cut(s) | 140, 294, 499, 553, 1127 |
| BseGI | GGATG | 5 cut(s) | 21, 445, 623, 862, 1073 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 62, 274, 684, 1016, 1128, 1133 |
| BseMI | GCAATG | 2 cut(s) | 246, 779 |
| BseNI | ACTGG | 2 cut(s) | 56, 84 |
| BseSI | GKGCMC | 1 cut(s) | 1154 |
| BseXI | GCAGC | 2 cut(s) | 640, 669 |
| BseYI | CCCAGC | 1 cut(s) | 678 |
| BsgI | GTGCAG | 1 cut(s) | 363 |
| BshFI | GGCC | 3 cut(s) | 44, 293, 1126 |
| BshNI | GGYRCC | 1 cut(s) | 168 |
| BsiHKCI | CYCGRG | 1 cut(s) | 413 |
| BsiSI | CCGG | 2 cut(s) | 229, 1117 |
| BslFI | GGGAC | 4 cut(s) | 196, 226, 844, 1103 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 62, 274, 684, 1016, 1128, 1133 |
| BsmAI | GTCTC | 2 cut(s) | 154, 412 |
| BsmBI | CGTCTC | 1 cut(s) | 154 |
| BsmFI | GGGAC | 4 cut(s) | 196, 226, 844, 1103 |
| BsnI | GGCC | 3 cut(s) | 44, 293, 1126 |
| Bso31I | GGTCTC | 1 cut(s) | 412 |
| BsoBI | CYCGRG | 1 cut(s) | 413 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1154 |
| Bsp143I | GATC | 1 cut(s) | 204 |
| Bsp19I | CCATGG | 1 cut(s) | 140 |
| BspACI | CCGC | 2 cut(s) | 654, 685 |
| BspANI | GGCC | 3 cut(s) | 44, 293, 1126 |
| BspLI | GGNNCC | 2 cut(s) | 170, 832 |
| BspMI | ACCTGC | 2 cut(s) | 385, 824 |
| BspT107I | GGYRCC | 1 cut(s) | 168 |
| BspTNI | GGTCTC | 1 cut(s) | 412 |
| BsrDI | GCAATG | 2 cut(s) | 246, 779 |
| BsrFI | RCCGGY | 1 cut(s) | 228 |
| BsrI | ACTGG | 2 cut(s) | 56, 84 |
| BssAI | RCCGGY | 1 cut(s) | 228 |
| BssECI | CCNNGG | 5 cut(s) | 140, 294, 499, 553, 1127 |
| BssMI | GATC | 1 cut(s) | 204 |
| BssT1I | CCWWGG | 4 cut(s) | 140, 499, 553, 1127 |
| Bst2UI | CCWGG | 4 cut(s) | 350, 744, 1011, 1123 |
| Bst4CI | ACNGT | 1 cut(s) | 218 |
| Bst6I | CTCTTC | 2 cut(s) | 873, 1092 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 397 |
| BstDEI | CTNAG | 1 cut(s) | 362 |
| BstDSI | CCRYGG | 1 cut(s) | 140 |
| BstF5I | GGATG | 5 cut(s) | 21, 445, 623, 862, 1073 |
| BstH2I | RGCGCY | 1 cut(s) | 195 |
| BstHHI | GCGC | 1 cut(s) | 194 |
| BstKTI | GATC | 1 cut(s) | 207 |
| BstMAI | GTCTC | 2 cut(s) | 154, 412 |
| BstMBI | GATC | 1 cut(s) | 204 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 74, 200, 397, 688, 1144 |
| BstNI | CCWGG | 4 cut(s) | 350, 744, 1011, 1123 |
| BstNSI | RCATGY | 4 cut(s) | 575, 635, 965, 1043 |
| BstSCI | CCNGG | 4 cut(s) | 348, 742, 1009, 1121 |
| BstSFI | CTRYAG | 1 cut(s) | 457 |
| BstSLI | GKGCMC | 1 cut(s) | 1154 |
| BstV1I | GCAGC | 2 cut(s) | 640, 669 |
| BstV2I | GAAGAC | 1 cut(s) | 917 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 356 |
| BsuRI | GGCC | 3 cut(s) | 44, 293, 1126 |
| BtgI | CCRYGG | 1 cut(s) | 140 |
| BtrI | CACGTC | 1 cut(s) | 259 |
| BtsCI | GGATG | 5 cut(s) | 21, 445, 623, 862, 1073 |
| BtsI | GCAGTG | 1 cut(s) | 1154 |
| BtsIMutI | CAGTG | 4 cut(s) | 77, 441, 583, 1154 |
| BveI | ACCTGC | 2 cut(s) | 385, 824 |
| CfoI | GCGC | 1 cut(s) | 194 |
| Cfr10I | RCCGGY | 1 cut(s) | 228 |
| Cfr13I | GGNCC | 3 cut(s) | 231, 831, 1119 |
| CsiI | ACCWGGT | 1 cut(s) | 742 |
| Csp6I | GTAC | 1 cut(s) | 131 |
| CviQI | GTAC | 1 cut(s) | 131 |
| DdeI | CTNAG | 1 cut(s) | 362 |
| DpnI | GATC | 1 cut(s) | 206 |
| DpnII | GATC | 1 cut(s) | 204 |
| EaeI | YGGCCR | 1 cut(s) | 291 |
| Eam1104I | CTCTTC | 2 cut(s) | 873, 1092 |
| EarI | CTCTTC | 2 cut(s) | 873, 1092 |
| Eco130I | CCWWGG | 4 cut(s) | 140, 499, 553, 1127 |
| Eco31I | GGTCTC | 1 cut(s) | 412 |
| Eco47I | GGWCC | 3 cut(s) | 231, 831, 1119 |
| Eco57I | CTGAAG | 3 cut(s) | 173, 588, 911 |
| Eco88I | CYCGRG | 1 cut(s) | 413 |
| EcoRII | CCWGG | 4 cut(s) | 348, 742, 1009, 1121 |
| EcoT14I | CCWWGG | 4 cut(s) | 140, 499, 553, 1127 |
| ErhI | CCWWGG | 4 cut(s) | 140, 499, 553, 1127 |
| Esp3I | CGTCTC | 1 cut(s) | 154 |
| FaqI | GGGAC | 4 cut(s) | 196, 226, 844, 1103 |
| FauNDI | CATATG | 2 cut(s) | 396, 424 |
| Fnu4HI | GCNGC | 2 cut(s) | 629, 683 |
| FokI | GGATG | 5 cut(s) | 8, 452, 630, 849, 1080 |
| Fsp4HI | GCNGC | 2 cut(s) | 629, 683 |
| FspBI | CTAG | 2 cut(s) | 93, 567 |
| GlaI | GCGC | 1 cut(s) | 193 |
| GluI | GCNGC | 2 cut(s) | 629, 683 |
| GsaI | CCCAGC | 1 cut(s) | 682 |
| HaeII | RGCGCY | 1 cut(s) | 195 |
| HaeIII | GGCC | 3 cut(s) | 44, 293, 1126 |
| HapII | CCGG | 2 cut(s) | 229, 1117 |
| HhaI | GCGC | 1 cut(s) | 194 |
| Hin6I | GCGC | 1 cut(s) | 192 |
| HinP1I | GCGC | 1 cut(s) | 192 |
| HincII | GTYRAC | 1 cut(s) | 959 |
| HindII | GTYRAC | 1 cut(s) | 959 |
| HinfI | GANTC | 6 cut(s) | 314, 403, 478, 698, 949, 1186 |
| HpaII | CCGG | 2 cut(s) | 229, 1117 |
| HphI | GGTGA | 5 cut(s) | 256, 488, 602, 968, 1195 |
| Hpy166II | GTNNAC | 4 cut(s) | 581, 936, 959, 976 |
| Hpy188I | TCNGA | 9 cut(s) | 18, 108, 319, 624, 668, 739, 930, 1176, 1226 |
| Hpy188III | TCNNGA | 1 cut(s) | 415 |
| Hpy8I | GTNNAC | 4 cut(s) | 581, 936, 959, 976 |
| HpyAV | CCTTC | 4 cut(s) | 559, 612, 961, 1200 |
| HpyCH4III | ACNGT | 1 cut(s) | 218 |
| HpyCH4IV | ACGT | 2 cut(s) | 258, 932 |
| HpyCH4V | TGCA | 4 cut(s) | 380, 400, 534, 1082 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 74, 200, 397, 688, 1144 |
| HpyF3I | CTNAG | 1 cut(s) | 362 |
| HpySE526I | ACGT | 2 cut(s) | 258, 932 |
| HspAI | GCGC | 1 cut(s) | 192 |
| Kzo9I | GATC | 1 cut(s) | 204 |
| LmnI | GCTCC | 1 cut(s) | 65 |
| Lsp1109I | GCAGC | 2 cut(s) | 640, 669 |
| LweI | GCATC | 3 cut(s) | 30, 231, 1058 |
| MabI | ACCWGGT | 1 cut(s) | 742 |
| MaeI | CTAG | 2 cut(s) | 93, 567 |
| MaeII | ACGT | 2 cut(s) | 258, 932 |
| MaeIII | GTNAC | 1 cut(s) | 557 |
| MalI | GATC | 1 cut(s) | 206 |
| MboI | GATC | 1 cut(s) | 204 |
| MboII | GAAGA | 5 cut(s) | 110, 474, 890, 917, 1109 |
| MfeI | CAATTG | 1 cut(s) | 522 |
| MhlI | GDGCHC | 1 cut(s) | 1154 |
| MluCI | AATT | 5 cut(s) | 101, 522, 758, 900, 1112 |
| MlyI | GAGTC | 3 cut(s) | 412, 472, 1195 |
| MmeI | TCCRAC | 1 cut(s) | 602 |
| MroXI | GAANNNNTTC | 1 cut(s) | 102 |
| MseI | TTAA | 3 cut(s) | 513, 780, 903 |
| MslI | CAYNNNNRTG | 2 cut(s) | 576, 1077 |
| MspA1I | CMGCKG | 2 cut(s) | 682, 841 |
| MspI | CCGG | 2 cut(s) | 229, 1117 |
| MspR9I | CCNGG | 4 cut(s) | 350, 744, 1011, 1123 |
| MunI | CAATTG | 1 cut(s) | 522 |
| MvaI | CCWGG | 4 cut(s) | 350, 744, 1011, 1123 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 74, 200, 397, 688, 1144 |
| NcoI | CCATGG | 1 cut(s) | 140 |
| NdeI | CATATG | 2 cut(s) | 396, 424 |
| NdeII | GATC | 1 cut(s) | 204 |
| NlaIV | GGNNCC | 2 cut(s) | 170, 832 |
| NmeAIII | GCCGAG | 2 cut(s) | 183, 319 |
| NspI | RCATGY | 4 cut(s) | 575, 635, 965, 1043 |
| PaeR7I | CTCGAG | 1 cut(s) | 413 |
| PciI | ACATGT | 1 cut(s) | 961 |
| PdmI | GAANNNNTTC | 1 cut(s) | 102 |
| PfeI | GAWTC | 3 cut(s) | 314, 698, 949 |
| PkrI | GCNGC | 2 cut(s) | 630, 684 |
| PleI | GAGTC | 3 cut(s) | 411, 472, 1194 |
| PpsI | GAGTC | 3 cut(s) | 411, 472, 1194 |
| PscI | ACATGT | 1 cut(s) | 961 |
| Psp6I | CCWGG | 4 cut(s) | 348, 742, 1009, 1121 |
| PspFI | CCCAGC | 1 cut(s) | 678 |
| PspGI | CCWGG | 4 cut(s) | 348, 742, 1009, 1121 |
| PspN4I | GGNNCC | 2 cut(s) | 170, 832 |
| PspPI | GGNCC | 3 cut(s) | 231, 831, 1119 |
| PvuII | CAGCTG | 2 cut(s) | 682, 841 |
| RsaI | GTAC | 1 cut(s) | 132 |
| RsaNI | GTAC | 1 cut(s) | 131 |
| RseI | CAYNNNNRTG | 2 cut(s) | 576, 1077 |
| SaqAI | TTAA | 3 cut(s) | 513, 780, 903 |
| SatI | GCNGC | 2 cut(s) | 629, 683 |
| Sau3AI | GATC | 1 cut(s) | 204 |
| Sau96I | GGNCC | 3 cut(s) | 231, 831, 1119 |
| SchI | GAGTC | 3 cut(s) | 412, 472, 1195 |
| ScrFI | CCNGG | 4 cut(s) | 350, 744, 1011, 1123 |
| SduI | GDGCHC | 1 cut(s) | 1154 |
| SexAI | ACCWGGT | 1 cut(s) | 742 |
| SfaNI | GCATC | 3 cut(s) | 30, 231, 1058 |
| SfcI | CTRYAG | 1 cut(s) | 457 |
| Sfr274I | CTCGAG | 1 cut(s) | 413 |
| SinI | GGWCC | 3 cut(s) | 231, 831, 1119 |
| SlaI | CTCGAG | 1 cut(s) | 413 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 576, 1077 |
| SmlI | CTYRAG | 3 cut(s) | 122, 386, 413 |
| SmoI | CTYRAG | 3 cut(s) | 122, 386, 413 |
| Sse9I | AATT | 5 cut(s) | 101, 522, 758, 900, 1112 |
| SsiI | CCGC | 2 cut(s) | 654, 685 |
| SspMI | CTAG | 2 cut(s) | 93, 567 |
| StyD4I | CCNGG | 4 cut(s) | 348, 742, 1009, 1121 |
| StyI | CCWWGG | 4 cut(s) | 140, 499, 553, 1127 |
| TaaI | ACNGT | 1 cut(s) | 218 |
| TaiI | ACGT | 2 cut(s) | 261, 935 |
| TaqI | TCGA | 2 cut(s) | 414, 947 |
| TasI | AATT | 5 cut(s) | 101, 522, 758, 900, 1112 |
| TatI | WGTACW | 1 cut(s) | 130 |
| TfiI | GAWTC | 3 cut(s) | 314, 698, 949 |
| Tru1I | TTAA | 3 cut(s) | 513, 780, 903 |
| Tru9I | TTAA | 3 cut(s) | 513, 780, 903 |
| TscAI | CASTG | 4 cut(s) | 84, 441, 583, 1154 |
| TseI | GCWGC | 2 cut(s) | 628, 682 |
| TspDTI | ATGAA | 7 cut(s) | 17, 482, 575, 767, 891, 1071, 1122 |
| TspGWI | ACGGA | 2 cut(s) | 178, 944 |
| TspRI | CASTG | 4 cut(s) | 84, 441, 583, 1154 |
| VpaK11BI | GGWCC | 3 cut(s) | 231, 831, 1119 |
| XapI | RAATTY | 2 cut(s) | 101, 1112 |
| XceI | RCATGY | 4 cut(s) | 575, 635, 965, 1043 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 58, 1061 |
| XhoI | CTCGAG | 1 cut(s) | 413 |
| XmnI | GAANNNNTTC | 1 cut(s) | 102 |
| XspI | CTAG | 2 cut(s) | 93, 567 |