Zinc finger protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 722 |
| Acc36I | ACCTGC | 3 cut(s) | 72, 238, 677 |
| AccB1I | GGYRCC | 1 cut(s) | 28 |
| AciI | CCGC | 2 cut(s) | 507, 538 |
| AcoI | YGGCCR | 2 cut(s) | 144, 459 |
| AcsI | RAATTY | 1 cut(s) | 965 |
| AcuI | CTGAAG | 2 cut(s) | 33, 764 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 127, 537, 869, 981, 986 |
| AflIII | ACRYGT | 2 cut(s) | 661, 814 |
| AgsI | TTSAA | 5 cut(s) | 223, 744, 836, 950, 1047 |
| AjiI | CACGTC | 1 cut(s) | 112 |
| AjnI | CCWGG | 3 cut(s) | 201, 595, 862 |
| AluBI | AGCT | 5 cut(s) | 11, 309, 535, 638, 694 |
| AluI | AGCT | 5 cut(s) | 11, 309, 535, 638, 694 |
| Alw26I | GTCTC | 2 cut(s) | 14, 265 |
| Ama87I | CYCGRG | 1 cut(s) | 266 |
| AoxI | GGCC | 3 cut(s) | 144, 459, 977 |
| ApeKI | GCWGC | 2 cut(s) | 481, 535 |
| ApoI | RAATTY | 1 cut(s) | 965 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 264, 296, 834, 866 |
| AspLEI | GCGC | 2 cut(s) | 54, 723 |
| AspS9I | GGNCC | 4 cut(s) | 84, 684, 972, 977 |
| AsuC2I | CCSGG | 1 cut(s) | 976 |
| AsuHPI | GGTGA | 5 cut(s) | 109, 341, 455, 821, 1048 |
| AvaI | CYCGRG | 1 cut(s) | 266 |
| AvaII | GGWCC | 3 cut(s) | 84, 684, 972 |
| BaeGI | GKGCMC | 1 cut(s) | 1007 |
| BanI | GGYRCC | 1 cut(s) | 28 |
| BbsI | GAAGAC | 1 cut(s) | 770 |
| BbvI | GCAGC | 2 cut(s) | 493, 522 |
| BccI | CCATC | 3 cut(s) | 155, 345, 461 |
| BciT130I | CCWGG | 3 cut(s) | 203, 597, 864 |
| BcnI | CCSGG | 1 cut(s) | 976 |
| BcoDI | GTCTC | 2 cut(s) | 14, 265 |
| BfaI | CTAG | 1 cut(s) | 420 |
| BfmI | CTRYAG | 3 cut(s) | 79, 310, 1011 |
| BfoI | RGCGCY | 1 cut(s) | 55 |
| BfuAI | ACCTGC | 3 cut(s) | 72, 238, 677 |
| BisI | GCNGC | 2 cut(s) | 482, 536 |
| BlsI | GCNGC | 2 cut(s) | 483, 537 |
| Bme1390I | CCNGG | 4 cut(s) | 203, 597, 864, 976 |
| Bme18I | GGWCC | 3 cut(s) | 84, 684, 972 |
| BmeT110I | CYCGRG | 1 cut(s) | 266 |
| BmgBI | CACGTC | 1 cut(s) | 112 |
| BmgT120I | GGNCC | 4 cut(s) | 84, 684, 972, 977 |
| BmiI | GGNNCC | 2 cut(s) | 30, 685 |
| BmrFI | CCNGG | 4 cut(s) | 203, 597, 864, 976 |
| BmsI | GCATC | 2 cut(s) | 84, 911 |
| BpiI | GAAGAC | 1 cut(s) | 770 |
| BpuEI | CTTGAG | 1 cut(s) | 224 |
| BpuMI | CCSGG | 1 cut(s) | 976 |
| BsaI | GGTCTC | 1 cut(s) | 265 |
| BsaJI | CCNNGG | 4 cut(s) | 147, 352, 406, 980 |
| BsaWI | WCCGGW | 1 cut(s) | 969 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 127, 537, 869, 981, 986 |
| Bse3DI | GCAATG | 2 cut(s) | 99, 632 |
| BseBI | CCWGG | 3 cut(s) | 203, 597, 864 |
| BseDI | CCNNGG | 4 cut(s) | 147, 352, 406, 980 |
| BseGI | GGATG | 3 cut(s) | 298, 476, 926 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 127, 537, 869, 981, 986 |
| BseMI | GCAATG | 2 cut(s) | 99, 632 |
| BseSI | GKGCMC | 1 cut(s) | 1007 |
| BseXI | GCAGC | 2 cut(s) | 493, 522 |
| BseYI | CCCAGC | 1 cut(s) | 531 |
| BsgI | GTGCAG | 1 cut(s) | 216 |
| BshFI | GGCC | 3 cut(s) | 146, 461, 979 |
| BshNI | GGYRCC | 1 cut(s) | 28 |
| BsiHKCI | CYCGRG | 1 cut(s) | 266 |
| BsiSI | CCGG | 2 cut(s) | 970, 975 |
| BslFI | GGGAC | 4 cut(s) | 56, 79, 697, 956 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 127, 537, 869, 981, 986 |
| BsmAI | GTCTC | 2 cut(s) | 14, 265 |
| BsmBI | CGTCTC | 1 cut(s) | 14 |
| BsmFI | GGGAC | 4 cut(s) | 56, 79, 697, 956 |
| BsnI | GGCC | 3 cut(s) | 146, 461, 979 |
| Bso31I | GGTCTC | 1 cut(s) | 265 |
| BsoBI | CYCGRG | 1 cut(s) | 266 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1007 |
| BspACI | CCGC | 2 cut(s) | 507, 538 |
| BspANI | GGCC | 3 cut(s) | 146, 461, 979 |
| BspLI | GGNNCC | 2 cut(s) | 30, 685 |
| BspMAI | CTGCAG | 1 cut(s) | 83 |
| BspMI | ACCTGC | 3 cut(s) | 72, 238, 677 |
| BspT107I | GGYRCC | 1 cut(s) | 28 |
| BspTNI | GGTCTC | 1 cut(s) | 265 |
| BsrDI | GCAATG | 2 cut(s) | 99, 632 |
| BssECI | CCNNGG | 4 cut(s) | 147, 352, 406, 980 |
| BssT1I | CCWWGG | 3 cut(s) | 352, 406, 980 |
| Bst2UI | CCWGG | 3 cut(s) | 203, 597, 864 |
| Bst4CI | ACNGT | 2 cut(s) | 71, 1012 |
| Bst6I | CTCTTC | 2 cut(s) | 726, 945 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 250 |
| BstDEI | CTNAG | 1 cut(s) | 215 |
| BstF5I | GGATG | 3 cut(s) | 298, 476, 926 |
| BstH2I | RGCGCY | 1 cut(s) | 55 |
| BstHHI | GCGC | 2 cut(s) | 54, 723 |
| BstMAI | GTCTC | 2 cut(s) | 14, 265 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 60, 250, 541, 997 |
| BstNI | CCWGG | 3 cut(s) | 203, 597, 864 |
| BstNSI | RCATGY | 5 cut(s) | 428, 488, 665, 818, 896 |
| BstSCI | CCNGG | 4 cut(s) | 201, 595, 862, 974 |
| BstSFI | CTRYAG | 3 cut(s) | 79, 310, 1011 |
| BstSLI | GKGCMC | 1 cut(s) | 1007 |
| BstV1I | GCAGC | 2 cut(s) | 493, 522 |
| BstV2I | GAAGAC | 1 cut(s) | 770 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 209 |
| BsuRI | GGCC | 3 cut(s) | 146, 461, 979 |
| BtrI | CACGTC | 1 cut(s) | 112 |
| BtsCI | GGATG | 3 cut(s) | 298, 476, 926 |
| BtsI | GCAGTG | 1 cut(s) | 1007 |
| BtsIMutI | CAGTG | 4 cut(s) | 294, 436, 1007, 1008 |
| BveI | ACCTGC | 3 cut(s) | 72, 238, 677 |
| CfoI | GCGC | 2 cut(s) | 54, 723 |
| Cfr13I | GGNCC | 4 cut(s) | 84, 684, 972, 977 |
| CpoI | CGGWCCG | 1 cut(s) | 972 |
| CsiI | ACCWGGT | 1 cut(s) | 595 |
| CspI | CGGWCCG | 1 cut(s) | 972 |
| DdeI | CTNAG | 1 cut(s) | 215 |
| EaeI | YGGCCR | 2 cut(s) | 144, 459 |
| Eam1104I | CTCTTC | 2 cut(s) | 726, 945 |
| EarI | CTCTTC | 2 cut(s) | 726, 945 |
| Eco130I | CCWWGG | 3 cut(s) | 352, 406, 980 |
| Eco31I | GGTCTC | 1 cut(s) | 265 |
| Eco47I | GGWCC | 3 cut(s) | 84, 684, 972 |
| Eco57I | CTGAAG | 2 cut(s) | 33, 764 |
| Eco88I | CYCGRG | 1 cut(s) | 266 |
| EcoRII | CCWGG | 3 cut(s) | 201, 595, 862 |
| EcoT14I | CCWWGG | 3 cut(s) | 352, 406, 980 |
| ErhI | CCWWGG | 3 cut(s) | 352, 406, 980 |
| Esp3I | CGTCTC | 1 cut(s) | 14 |
| FaqI | GGGAC | 4 cut(s) | 56, 79, 697, 956 |
| FauNDI | CATATG | 2 cut(s) | 249, 277 |
| Fnu4HI | GCNGC | 2 cut(s) | 482, 536 |
| FokI | GGATG | 3 cut(s) | 305, 483, 933 |
| Fsp4HI | GCNGC | 2 cut(s) | 482, 536 |
| FspBI | CTAG | 1 cut(s) | 420 |
| FspI | TGCGCA | 1 cut(s) | 722 |
| GlaI | GCGC | 2 cut(s) | 53, 722 |
| GluI | GCNGC | 2 cut(s) | 482, 536 |
| GsaI | CCCAGC | 1 cut(s) | 535 |
| HaeII | RGCGCY | 1 cut(s) | 55 |
| HaeIII | GGCC | 3 cut(s) | 146, 461, 979 |
| HapII | CCGG | 2 cut(s) | 970, 975 |
| HhaI | GCGC | 2 cut(s) | 54, 723 |
| Hin6I | GCGC | 2 cut(s) | 52, 721 |
| HinP1I | GCGC | 2 cut(s) | 52, 721 |
| HincII | GTYRAC | 1 cut(s) | 812 |
| HindII | GTYRAC | 1 cut(s) | 812 |
| HinfI | GANTC | 6 cut(s) | 167, 256, 331, 551, 802, 1039 |
| HpaII | CCGG | 2 cut(s) | 970, 975 |
| HphI | GGTGA | 5 cut(s) | 109, 341, 455, 821, 1048 |
| Hpy166II | GTNNAC | 4 cut(s) | 434, 789, 812, 829 |
| Hpy188I | TCNGA | 7 cut(s) | 172, 477, 521, 592, 783, 1029, 1079 |
| Hpy188III | TCNNGA | 1 cut(s) | 268 |
| Hpy8I | GTNNAC | 4 cut(s) | 434, 789, 812, 829 |
| HpyAV | CCTTC | 4 cut(s) | 412, 465, 814, 1053 |
| HpyCH4III | ACNGT | 2 cut(s) | 71, 1012 |
| HpyCH4IV | ACGT | 2 cut(s) | 111, 785 |
| HpyCH4V | TGCA | 5 cut(s) | 81, 233, 253, 387, 935 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 60, 250, 541, 997 |
| HpyF3I | CTNAG | 1 cut(s) | 215 |
| HpySE526I | ACGT | 2 cut(s) | 111, 785 |
| HspAI | GCGC | 2 cut(s) | 52, 721 |
| Lsp1109I | GCAGC | 2 cut(s) | 493, 522 |
| LweI | GCATC | 2 cut(s) | 84, 911 |
| MabI | ACCWGGT | 1 cut(s) | 595 |
| MaeI | CTAG | 1 cut(s) | 420 |
| MaeII | ACGT | 2 cut(s) | 111, 785 |
| MaeIII | GTNAC | 2 cut(s) | 410, 664 |
| MboII | GAAGA | 4 cut(s) | 327, 743, 770, 962 |
| MfeI | CAATTG | 1 cut(s) | 375 |
| MhlI | GDGCHC | 1 cut(s) | 1007 |
| MluCI | AATT | 4 cut(s) | 375, 611, 753, 965 |
| MlyI | GAGTC | 3 cut(s) | 265, 325, 1048 |
| MseI | TTAA | 3 cut(s) | 366, 633, 756 |
| MslI | CAYNNNNRTG | 3 cut(s) | 429, 660, 930 |
| MspA1I | CMGCKG | 2 cut(s) | 535, 694 |
| MspI | CCGG | 2 cut(s) | 970, 975 |
| MspR9I | CCNGG | 4 cut(s) | 203, 597, 864, 976 |
| MunI | CAATTG | 1 cut(s) | 375 |
| MvaI | CCWGG | 3 cut(s) | 203, 597, 864 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 60, 250, 541, 997 |
| NciI | CCSGG | 1 cut(s) | 976 |
| NdeI | CATATG | 2 cut(s) | 249, 277 |
| NlaIV | GGNNCC | 2 cut(s) | 30, 685 |
| NmeAIII | GCCGAG | 2 cut(s) | 43, 172 |
| NsbI | TGCGCA | 1 cut(s) | 722 |
| NspI | RCATGY | 5 cut(s) | 428, 488, 665, 818, 896 |
| PaeR7I | CTCGAG | 1 cut(s) | 266 |
| PciI | ACATGT | 2 cut(s) | 661, 814 |
| PfeI | GAWTC | 3 cut(s) | 167, 551, 802 |
| PkrI | GCNGC | 2 cut(s) | 483, 537 |
| PleI | GAGTC | 3 cut(s) | 264, 325, 1047 |
| PpsI | GAGTC | 3 cut(s) | 264, 325, 1047 |
| PscI | ACATGT | 2 cut(s) | 661, 814 |
| Psp6I | CCWGG | 3 cut(s) | 201, 595, 862 |
| PspFI | CCCAGC | 1 cut(s) | 531 |
| PspGI | CCWGG | 3 cut(s) | 201, 595, 862 |
| PspN4I | GGNNCC | 2 cut(s) | 30, 685 |
| PspPI | GGNCC | 4 cut(s) | 84, 684, 972, 977 |
| PstI | CTGCAG | 1 cut(s) | 83 |
| PvuII | CAGCTG | 2 cut(s) | 535, 694 |
| RseI | CAYNNNNRTG | 3 cut(s) | 429, 660, 930 |
| Rsr2I | CGGWCCG | 1 cut(s) | 972 |
| RsrII | CGGWCCG | 1 cut(s) | 972 |
| SaqAI | TTAA | 3 cut(s) | 366, 633, 756 |
| SatI | GCNGC | 2 cut(s) | 482, 536 |
| Sau96I | GGNCC | 4 cut(s) | 84, 684, 972, 977 |
| SchI | GAGTC | 3 cut(s) | 265, 325, 1048 |
| ScrFI | CCNGG | 4 cut(s) | 203, 597, 864, 976 |
| SduI | GDGCHC | 1 cut(s) | 1007 |
| SexAI | ACCWGGT | 1 cut(s) | 595 |
| SfaNI | GCATC | 2 cut(s) | 84, 911 |
| SfcI | CTRYAG | 3 cut(s) | 79, 310, 1011 |
| Sfr274I | CTCGAG | 1 cut(s) | 266 |
| SinI | GGWCC | 3 cut(s) | 84, 684, 972 |
| SlaI | CTCGAG | 1 cut(s) | 266 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 429, 660, 930 |
| SmlI | CTYRAG | 2 cut(s) | 239, 266 |
| SmoI | CTYRAG | 2 cut(s) | 239, 266 |
| Sse9I | AATT | 4 cut(s) | 375, 611, 753, 965 |
| SsiI | CCGC | 2 cut(s) | 507, 538 |
| SspMI | CTAG | 1 cut(s) | 420 |
| StyD4I | CCNGG | 4 cut(s) | 201, 595, 862, 974 |
| StyI | CCWWGG | 3 cut(s) | 352, 406, 980 |
| TaaI | ACNGT | 2 cut(s) | 71, 1012 |
| TaiI | ACGT | 2 cut(s) | 114, 788 |
| TaqI | TCGA | 2 cut(s) | 267, 800 |
| TasI | AATT | 4 cut(s) | 375, 611, 753, 965 |
| TfiI | GAWTC | 3 cut(s) | 167, 551, 802 |
| Tru1I | TTAA | 3 cut(s) | 366, 633, 756 |
| Tru9I | TTAA | 3 cut(s) | 366, 633, 756 |
| TscAI | CASTG | 4 cut(s) | 294, 436, 1007, 1015 |
| TseI | GCWGC | 2 cut(s) | 481, 535 |
| TspDTI | ATGAA | 6 cut(s) | 335, 428, 620, 744, 924, 975 |
| TspGWI | ACGGA | 2 cut(s) | 38, 797 |
| TspRI | CASTG | 4 cut(s) | 294, 436, 1007, 1015 |
| VpaK11BI | GGWCC | 3 cut(s) | 84, 684, 972 |
| XapI | RAATTY | 1 cut(s) | 965 |
| XceI | RCATGY | 5 cut(s) | 428, 488, 665, 818, 896 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 914 |
| XhoI | CTCGAG | 1 cut(s) | 266 |
| XspI | CTAG | 1 cut(s) | 420 |