Rw2G036560

guanosine tetraphosphate biosynthetic process

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
60175068 .. 60178152
3085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G036560.1

Sequence Viewer

Length: 2157 bp
ATGACGGTCCCGATTGCTCTGTACGCAACGCCGCCGAGCAGTGTGTGCTCGCACGCCACGTTTGATTTCGAATTGAGCTCCAGATCTTCGTCGTCCACGGCTTCGACGCCGTCCACGTCACAGAAGCCGGCGGTGGGGGGCTTGTCGTGCTTGTTCTCGTCTCCGACGGTGAAGCATGCTTCGTCTTCTTCCAGCTTTTCGGGCGGAGGAGGTGAGGAATTGGGGTCGATGTGGCCTGATAGGGGTGAAGAGTTGAAGGAGCTGAGTAGCTCGTTTCGGTATTCGCAGAGCAAGTTCAATGGGGCTTCAATGAATAGAGATCAGAGCCCGATTTCGGTGTTTCAGGGTCCGGTTTCGAGTAGCAGCAGTGGGGTTTCGAGCTCCGCGAGGAGCCCTCCGATGAGAATTGCGCGGGAAAGGAGTAGCAATGGAGATGTGAACTTGCGGTGCGCTAGTAATGGGCTGTTTAATGGCTTTGTGAGGGGTGCTTTGGGGTCTTCCTGTGTGGATTATGACTCGCCGAGCTTCGAGGTGCGAAATGATGCTCTGGAGATGAGATCATCAGCTGCGCTGGATGAATTGACTTTCAACATGGAGGATGGGTTTGTGGAGGGCAATTTCGAGCCTTATGCAAGTGAGTTGCTTGTAGGTGCGCAGTTGCAGCACAAGATTTTCTATGAAGAGTTTGTGATCAAGGCTTTCTATGAGGCTGAGAAAGCACACAGAGGGCAGATGCGAGCAAGTGGTGATCCGTATTTGCAGCATTGTGTAGAAACGGCGGTGCTGCTCGCATTGATCGGGGCTAATTCCACAGTTGTTGCTGCAGGGCTTTTGCATGACACGCTTGATGATTCTGTTATGAGTTATGACTATATATTTGGAAAATTTGGAGCAGGAGTTGCTGACCTAGTTGAAGGGGTGTCAAAGCTGAGTCATTTGAGCAAGCTTGCCCGTGATAATAATACTGCGTGCAAGACAGTTGAGGCAGACCGTTTGCATACCATGTTTCTTGCCATGGCAGATGCTCGAGCTGTTCTCATTAAATTGGCTGATCGATTGCATAATATGATGACACTGGATGCATTGCCCTTAACTAAACAGCAAAGGTTTGCAAAAGAGACTTTGGAGATCTTTGTGCCATTGGCCCACCGACTAGGAATCTCAAGCTGGAAGGTGCAGCTAGAAAATTTATGTTTTAAGCATCTCAATCCAGACCAACACAATGACCTATCGTCTAAGCTTGAAGATTCATTTGATGATGCAATGATTACTTCTGCCACAGCGAGATTAGACCAAGCTCTTAGAGAAAAAGCCATTTCCTACCATGTACTCTGTGGACGGCATAAGAGCTTGTATAGTATCTACTGCAAAATGTTAAAAAAAAAACTGAACATGAGTGAAATTCATGATATCCATGGACTACGTTTGATTGTTGAGAAAGAGGAAGATTGCTATCAAGCACTGGAAGTTGTTCGTCAGCTATGGACTGAGGTTCCAGGGAAGTTCAAGGACTACATAACACAACCCAAGTGCATGGTACCCTTAGAAGTGCAAATTCGAACAAAGGAGATGCATTTGCAAGCTGAATTTGGATTTGCTGCTCATTGGAGATATAAGGAAGGTGATTGTAAGCACCCATCGTTTGTGCTTCAGATGGTTGAGTGGGCAAGATGGGTGGTCACTTGGCAGTGCGAGGCAATGAGCAGAGACCGGTCGTCGATTACCTATGCTGACTCAATCAAGCCACCTTGCACATTTCCTTCTCATTCCGATGACTGCCCTTATTCTTACAAATCCCACTGTGGTGAAGATGAGCCAGTGTTCGTCATCTTAATAGAGAATGACAAGATGTCTGTGCAAGAATTTCCTGCAAACTCGACGATTATGGATCTGGTTGAAAAAGTTGGGCGCGGGAGCATGAGATGGACAACATATGGACTCCCATTGAAGGAAGAACTAAGGCCTAGGCTGAACAAAATGCCAGTGAGTGATCCTACATGCAAACTGCAGATGGGGGATGTAGTGGAGCTGACCCCAGCTATTCCTGACAAGTCATTAACAGAGTACAGGGAAGAGATTCAACGCATGTACGACCGGGGCAGGACTGTATCAAGTGTAGGGTCTCCTGCTAAAAGCATGGTAGGCTGGAGAAGATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

718

Amino Acids

80.0

Weight (kDa)

6.06

Isoelectric Point (pI)

50.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HD_4 PF13328 233 - 387 2.7e-39 HD domain
HD PF01966 252 - 356 1.4e-08 HD domain
RelA_SpoT PF04607 446 - 541 3e-27 Region found in RelA / SpoT proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011437)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 654
Acc65I GGTACC 1 cut(s) 1537
AccB1I GGYRCC 1 cut(s) 1537
AccII CGCG 3 cut(s) 386, 412, 1911
AciI CCGC 8 cut(s) 32, 131, 204, 384, 412, 445, 779, 1911
AclWI GGATC 3 cut(s) 743, 1896, 1985
AcsI RAATTY 6 cut(s) 884, 1186, 1401, 1554, 1586, 1862
AcuI CTGAAG 1 cut(s) 1634
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 5 cut(s) 23, 1329, 1539, 2066, 2090
AfiI CCNNNNNNNGG 4 cut(s) 134, 242, 334, 1948
AgeI ACCGGT 1 cut(s) 1710
AhdI GACNNNNNGTC 3 cut(s) 1231, 1714, 1849
AjiI CACGTC 1 cut(s) 117
AjnI CCWGG 1 cut(s) 1495
AleI CACNNNNGTG 1 cut(s) 1803
Alw21I GWGCWC 3 cut(s) 50, 80, 383
Alw26I GTCTC 4 cut(s) 165, 1112, 1701, 2127
AlwI GGATC 3 cut(s) 743, 1896, 1985
Ama87I CYCGRG 1 cut(s) 1026
AoxI GGCC 3 cut(s) 233, 1143, 1961
ApeKI GCWGC 8 cut(s) 363, 566, 661, 760, 784, 821, 1177, 1598
ApoI RAATTY 6 cut(s) 884, 1186, 1401, 1554, 1586, 1862
ArsI GACNNNNNNTTYG 2 cut(s) 860, 892
AsiGI ACCGGT 1 cut(s) 1710
Asp700I GAANNNNTTC 2 cut(s) 1470, 2076
Asp718I GGTACC 1 cut(s) 1537
AspA2I CCTAGG 1 cut(s) 1964
AspLEI GCGC 5 cut(s) 412, 452, 571, 655, 1911
AspS9I GGNCC 3 cut(s) 7, 347, 1144
AsuC2I CCSGG 1 cut(s) 2096
AsuHPI GGTGA 6 cut(s) 181, 224, 257, 758, 1634, 1817
AsuII TTCGAA 2 cut(s) 69, 1558
AvaI CYCGRG 1 cut(s) 1026
AvaII GGWCC 2 cut(s) 7, 347
AvrII CCTAGG 1 cut(s) 1964
BanI GGYRCC 1 cut(s) 1537
BanII GRGCYC 4 cut(s) 80, 329, 383, 395
BbsI GAAGAC 2 cut(s) 177, 489
Bbv12I GWGCWC 3 cut(s) 50, 80, 383
BbvI GCAGC 8 cut(s) 375, 553, 673, 771, 772, 808, 1189, 1585
BccI CCATC 6 cut(s) 593, 1645, 1648, 1665, 1917, 2005
BceAI ACGGC 4 cut(s) 94, 114, 792, 1355
BcgI CGANNNNNNTGC 2 cut(s) 611, 645
BciT130I CCWGG 1 cut(s) 1497
BclI TGATCA 1 cut(s) 690
BcnI CCSGG 1 cut(s) 2096
BcoDI GTCTC 4 cut(s) 165, 1112, 1701, 2127
BfaI CTAG 5 cut(s) 453, 908, 1154, 1181, 1965
BfmI CTRYAG 2 cut(s) 822, 2006
BglII AGATCT 2 cut(s) 83, 1128
BisI GCNGC 9 cut(s) 32, 364, 567, 662, 761, 785, 822, 1178, 1599
BlnI CCTAGG 1 cut(s) 1964
BlsI GCNGC 9 cut(s) 33, 365, 568, 663, 762, 786, 823, 1179, 1600
Bme1390I CCNGG 2 cut(s) 1497, 2096
Bme18I GGWCC 2 cut(s) 7, 347
BmeRI GACNNNNNGTC 3 cut(s) 1231, 1714, 1849
BmeT110I CYCGRG 1 cut(s) 1026
BmgBI CACGTC 1 cut(s) 117
BmgT120I GGNCC 3 cut(s) 7, 347, 1144
BmiI GGNNCC 5 cut(s) 9, 348, 392, 1494, 1539
BmrFI CCNGG 2 cut(s) 1497, 2096
BmsI GCATC 7 cut(s) 532, 723, 1012, 1069, 1210, 1249, 1560
BpiI GAAGAC 2 cut(s) 177, 489
BplI GAGNNNNNCTC 4 cut(s) 379, 411, 1020, 1052
BpmI CTGGAG 2 cut(s) 64, 569
Bpu14I TTCGAA 2 cut(s) 69, 1558
BpuEI CTTGAG 1 cut(s) 1147
BpuMI CCSGG 1 cut(s) 2096
Bsa29I ATCGAT 1 cut(s) 1054
BsaBI GATNNNNATC 1 cut(s) 1452
BsaHI GRCGYC 1 cut(s) 107
BsaI GGTCTC 2 cut(s) 1701, 2127
BsaJI CCNNGG 6 cut(s) 96, 1014, 1414, 1496, 1964, 2095
BsaWI WCCGGW 2 cut(s) 349, 1710
BsaXI ACNNNNNCTCC 4 cut(s) 587, 617, 882, 912
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 242, 334, 1948
Bse118I RCCGGY 2 cut(s) 127, 1710
Bse1I ACTGG 4 cut(s) 1080, 1467, 1817, 1982
Bse3DI GCAATG 4 cut(s) 433, 1082, 1269, 1704
Bse8I GATNNNNATC 1 cut(s) 1452
BseBI CCWGG 1 cut(s) 1497
BseCI ATCGAT 1 cut(s) 1054
BseDI CCNNGG 6 cut(s) 96, 1014, 1414, 1496, 1964, 2095
BseGI GGATG 4 cut(s) 580, 604, 1084, 2023
BseJI GATNNNNATC 1 cut(s) 1452
BseLI CCNNNNNNNGG 4 cut(s) 134, 242, 334, 1948
BseMI GCAATG 4 cut(s) 433, 1082, 1269, 1704
BseMII CTCAG 4 cut(s) 254, 702, 920, 1479
BseNI ACTGG 4 cut(s) 1080, 1467, 1817, 1982
BseRI GAGGAG 2 cut(s) 222, 403
BseXI GCAGC 8 cut(s) 375, 553, 673, 771, 772, 808, 1189, 1585
BseYI CCCAGC 1 cut(s) 2035
BsgI GTGCAG 1 cut(s) 1196
Bsh1236I CGCG 3 cut(s) 386, 412, 1911
Bsh1285I CGRYCG 2 cut(s) 1715, 2095
BshFI GGCC 3 cut(s) 235, 1145, 1963
BshNI GGYRCC 1 cut(s) 1537
BshTI ACCGGT 1 cut(s) 1710
BshVI ATCGAT 1 cut(s) 1054
BsiEI CGRYCG 2 cut(s) 1715, 2095
BsiHKAI GWGCWC 3 cut(s) 50, 80, 383
BsiHKCI CYCGRG 1 cut(s) 1026
BsiSI CCGG 4 cut(s) 128, 350, 1711, 2095
BslI CCNNNNNNNGG 4 cut(s) 134, 242, 334, 1948
BsmAI GTCTC 4 cut(s) 165, 1112, 1701, 2127
BsmBI CGTCTC 1 cut(s) 165
BsnI GGCC 3 cut(s) 235, 1145, 1963
Bso31I GGTCTC 2 cut(s) 1701, 2127
BsoBI CYCGRG 1 cut(s) 1026
Bsp119I TTCGAA 2 cut(s) 69, 1558
Bsp1286I GDGCHC 5 cut(s) 50, 80, 329, 383, 395
Bsp19I CCATGG 2 cut(s) 1014, 1414
BspACI CCGC 8 cut(s) 32, 131, 204, 384, 412, 445, 779, 1911
BspANI GGCC 3 cut(s) 235, 1145, 1963
BspCNI CTCAG 4 cut(s) 255, 703, 921, 1480
BspDI ATCGAT 1 cut(s) 1054
BspFNI CGCG 3 cut(s) 386, 412, 1911
BspHI TCATGA 1 cut(s) 1405
BspLI GGNNCC 5 cut(s) 9, 348, 392, 1494, 1539
BspMAI CTGCAG 2 cut(s) 826, 2010
BspPI GGATC 3 cut(s) 743, 1896, 1985
BspT104I TTCGAA 2 cut(s) 69, 1558
BspT107I GGYRCC 1 cut(s) 1537
BspTNI GGTCTC 2 cut(s) 1701, 2127
BsrDI GCAATG 4 cut(s) 433, 1082, 1269, 1704
BsrFI RCCGGY 2 cut(s) 127, 1710
BsrI ACTGG 4 cut(s) 1080, 1467, 1817, 1982
BssAI RCCGGY 2 cut(s) 127, 1710
BssECI CCNNGG 6 cut(s) 96, 1014, 1414, 1496, 1964, 2095
BssNI GRCGYC 1 cut(s) 107
BssT1I CCWWGG 3 cut(s) 1014, 1414, 1964
Bst2UI CCWGG 1 cut(s) 1497
Bst4CI ACNGT 7 cut(s) 7, 169, 814, 979, 992, 1802, 2107
Bst6I CTCTTC 3 cut(s) 243, 675, 2067
BstACI GRCGYC 1 cut(s) 107
BstAPI GCANNNNNTGC 2 cut(s) 45, 899
BstBI TTCGAA 2 cut(s) 69, 1558
BstDEI CTNAG 8 cut(s) 263, 711, 929, 1236, 1301, 1488, 1543, 1958
BstDSI CCRYGG 3 cut(s) 96, 1014, 1414
BstF5I GGATG 4 cut(s) 580, 604, 1084, 2023
BstFNI CGCG 3 cut(s) 386, 412, 1911
BstHHI GCGC 5 cut(s) 412, 452, 571, 655, 1911
BstMAI GTCTC 4 cut(s) 165, 1112, 1701, 2127
BstMCI CGRYCG 2 cut(s) 1715, 2095
BstMWI GCNNNNNNNGC 9 cut(s) 23, 45, 147, 201, 661, 716, 841, 899, 2142
BstNI CCWGG 1 cut(s) 1497
BstNSI RCATGY 3 cut(s) 179, 2001, 2089
BstSCI CCNGG 2 cut(s) 1495, 2094
BstSFI CTRYAG 2 cut(s) 822, 2006
BstUI CGCG 3 cut(s) 386, 412, 1911
BstV1I GCAGC 8 cut(s) 375, 553, 673, 771, 772, 808, 1189, 1585
BstV2I GAAGAC 2 cut(s) 177, 489
BstX2I RGATCY 3 cut(s) 83, 1128, 1888
BstXI CCANNNNNNTGG 1 cut(s) 1534
BstYI RGATCY 3 cut(s) 83, 1128, 1888
Bsu15I ATCGAT 1 cut(s) 1054
BsuRI GGCC 3 cut(s) 235, 1145, 1963
BsuTUI ATCGAT 1 cut(s) 1054
BtgI CCRYGG 3 cut(s) 96, 1014, 1414
BtrI CACGTC 1 cut(s) 117
BtsCI GGATG 4 cut(s) 580, 604, 1084, 2023
BtsI GCAGTG 3 cut(s) 46, 373, 1694
BtsIMutI CAGTG 8 cut(s) 46, 373, 1073, 1460, 1694, 1798, 1824, 1989
CciI TCATGA 1 cut(s) 1405
CfoI GCGC 5 cut(s) 412, 452, 571, 655, 1911
Cfr10I RCCGGY 2 cut(s) 127, 1710
Cfr13I GGNCC 3 cut(s) 7, 347, 1144
ClaI ATCGAT 1 cut(s) 1054
CseI GACGC 1 cut(s) 115
Csp6I GTAC 5 cut(s) 22, 1328, 1538, 2065, 2089
CspAI ACCGGT 1 cut(s) 1710
CspCI CAANNNNNGTGG 4 cut(s) 799, 834, 1656, 1691
CviQI GTAC 5 cut(s) 22, 1328, 1538, 2065, 2089
DdeI CTNAG 8 cut(s) 263, 711, 929, 1236, 1301, 1488, 1543, 1958
DriI GACNNNNNGTC 3 cut(s) 1231, 1714, 1849
Eam1104I CTCTTC 3 cut(s) 243, 675, 2067
Eam1105I GACNNNNNGTC 3 cut(s) 1231, 1714, 1849
EarI CTCTTC 3 cut(s) 243, 675, 2067
EciI GGCGGA 1 cut(s) 219
Ecl136II GAGCTC 2 cut(s) 78, 381
Eco130I CCWWGG 3 cut(s) 1014, 1414, 1964
Eco147I AGGCCT 1 cut(s) 1963
Eco24I GRGCYC 4 cut(s) 80, 329, 383, 395
Eco31I GGTCTC 2 cut(s) 1701, 2127
Eco32I GATATC 1 cut(s) 1411
Eco47I GGWCC 2 cut(s) 7, 347
Eco53kI GAGCTC 2 cut(s) 78, 381
Eco57I CTGAAG 1 cut(s) 1634
Eco88I CYCGRG 1 cut(s) 1026
EcoICRI GAGCTC 2 cut(s) 78, 381
EcoRII CCWGG 1 cut(s) 1495
EcoRV GATATC 1 cut(s) 1411
EcoT14I CCWWGG 3 cut(s) 1014, 1414, 1964
EcoT22I ATGCAT 2 cut(s) 1084, 1575
EcoT38I GRGCYC 4 cut(s) 80, 329, 383, 395
ErhI CCWWGG 3 cut(s) 1014, 1414, 1964
Esp3I CGTCTC 1 cut(s) 165
FauI CCCGC 2 cut(s) 405, 1904
FauNDI CATATG 1 cut(s) 1933
FbaI TGATCA 1 cut(s) 690
Fnu4HI GCNGC 9 cut(s) 32, 364, 567, 662, 761, 785, 822, 1178, 1599
FokI GGATG 4 cut(s) 587, 611, 1091, 2030
FriOI GRGCYC 4 cut(s) 80, 329, 383, 395
Fsp4HI GCNGC 9 cut(s) 32, 364, 567, 662, 761, 785, 822, 1178, 1599
FspBI CTAG 5 cut(s) 453, 908, 1154, 1181, 1965
FspI TGCGCA 1 cut(s) 654
GlaI GCGC 5 cut(s) 411, 451, 570, 654, 1910
GluI GCNGC 9 cut(s) 32, 364, 567, 662, 761, 785, 822, 1178, 1599
GsaI CCCAGC 1 cut(s) 2039
GsuI CTGGAG 2 cut(s) 64, 569
HaeIII GGCC 3 cut(s) 235, 1145, 1963
HapII CCGG 4 cut(s) 128, 350, 1711, 2095
HgaI GACGC 1 cut(s) 115
HhaI GCGC 5 cut(s) 412, 452, 571, 655, 1911
Hin1I GRCGYC 1 cut(s) 107
Hin6I GCGC 5 cut(s) 410, 450, 569, 653, 1909
HinP1I GCGC 5 cut(s) 410, 450, 569, 653, 1909
HindIII AAGCTT 2 cut(s) 944, 1238
HinfI GANTC 8 cut(s) 515, 851, 931, 1158, 1247, 1733, 1938, 2077
HpaII CCGG 4 cut(s) 128, 350, 1711, 2095
HphI GGTGA 6 cut(s) 181, 224, 257, 758, 1634, 1817
Hpy166II GTNNAC 4 cut(s) 96, 114, 439, 1337
Hpy188I TCNGA 5 cut(s) 165, 324, 399, 1653, 1771
Hpy188III TCNNGA 6 cut(s) 10, 81, 548, 1211, 1406, 2045
Hpy8I GTNNAC 4 cut(s) 96, 114, 439, 1337
Hpy99I CGWCG 5 cut(s) 94, 109, 169, 1720, 1882
HpyAV CCTTC 6 cut(s) 250, 908, 1165, 1613, 1770, 1942
HpyCH4III ACNGT 7 cut(s) 7, 169, 814, 979, 992, 1802, 2107
HpyCH4IV ACGT 3 cut(s) 59, 116, 1423
HpyF10VI GCNNNNNNNGC 9 cut(s) 23, 45, 147, 201, 661, 716, 841, 899, 2142
HpyF3I CTNAG 8 cut(s) 263, 711, 929, 1236, 1301, 1488, 1543, 1958
HpySE526I ACGT 3 cut(s) 59, 116, 1423
Hsp92I GRCGYC 1 cut(s) 107
HspAI GCGC 5 cut(s) 410, 450, 569, 653, 1909
KpnI GGTACC 1 cut(s) 1541
KroI GCCGGC 1 cut(s) 127
KroNI GCCGGC 1 cut(s) 129
Ksp22I TGATCA 1 cut(s) 690
LmnI GCTCC 7 cut(s) 83, 259, 386, 390, 890, 1914, 2026
Lsp1109I GCAGC 8 cut(s) 375, 553, 673, 771, 772, 808, 1189, 1585
LweI GCATC 7 cut(s) 532, 723, 1012, 1069, 1210, 1249, 1560
MaeI CTAG 5 cut(s) 453, 908, 1154, 1181, 1965
MaeII ACGT 3 cut(s) 59, 116, 1423
MaeIII GTNAC 2 cut(s) 117, 1678
MflI RGATCY 3 cut(s) 83, 1128, 1888
MhlI GDGCHC 5 cut(s) 50, 80, 329, 383, 395
MlyI GAGTC 4 cut(s) 509, 940, 1727, 1932
MmeI TCCRAC 1 cut(s) 188
Mph1103I ATGCAT 2 cut(s) 1084, 1575
MroNI GCCGGC 1 cut(s) 127
MroXI GAANNNNTTC 2 cut(s) 1470, 2076
MseI TTAA 7 cut(s) 468, 1041, 1091, 1197, 1376, 1832, 2057
MslI CAYNNNNRTG 2 cut(s) 1770, 1803
MspA1I CMGCKG 1 cut(s) 566
MspI CCGG 4 cut(s) 128, 350, 1711, 2095
MspR9I CCNGG 2 cut(s) 1497, 2096
MvaI CCWGG 1 cut(s) 1497
MvnI CGCG 3 cut(s) 386, 412, 1911
MwoI GCNNNNNNNGC 9 cut(s) 23, 45, 147, 201, 661, 716, 841, 899, 2142
NaeI GCCGGC 1 cut(s) 129
NciI CCSGG 1 cut(s) 2096
NcoI CCATGG 2 cut(s) 1014, 1414
NdeI CATATG 1 cut(s) 1933
NgoMIV GCCGGC 1 cut(s) 127
NlaIV GGNNCC 5 cut(s) 9, 348, 392, 1494, 1539
NmeAIII GCCGAG 2 cut(s) 60, 546
NmuCI GTSAC 2 cut(s) 117, 1678
NsbI TGCGCA 1 cut(s) 654
NsiI ATGCAT 2 cut(s) 1084, 1575
NspI RCATGY 3 cut(s) 179, 2001, 2089
NspV TTCGAA 2 cut(s) 69, 1558
OliI CACNNNNGTG 1 cut(s) 1803
PaeI GCATGC 1 cut(s) 179
PaeR7I CTCGAG 1 cut(s) 1026
PagI TCATGA 1 cut(s) 1405
PceI AGGCCT 1 cut(s) 1963
PcsI WCGNNNNNNNCGW 3 cut(s) 56, 113, 383
PdiI GCCGGC 1 cut(s) 129
PdmI GAANNNNTTC 2 cut(s) 1470, 2076
PfeI GAWTC 4 cut(s) 851, 1158, 1247, 2077
PflFI GACNNNGTC 1 cut(s) 109
PinAI ACCGGT 1 cut(s) 1710
PkrI GCNGC 9 cut(s) 33, 365, 568, 663, 762, 786, 823, 1179, 1600
PleI GAGTC 4 cut(s) 509, 939, 1727, 1932
PpsI GAGTC 4 cut(s) 509, 939, 1727, 1932
Psp124BI GAGCTC 2 cut(s) 80, 383
Psp6I CCWGG 1 cut(s) 1495
PspFI CCCAGC 1 cut(s) 2035
PspGI CCWGG 1 cut(s) 1495
PspN4I GGNNCC 5 cut(s) 9, 348, 392, 1494, 1539
PspPI GGNCC 3 cut(s) 7, 347, 1144
PspXI VCTCGAGB 1 cut(s) 1026
PstI CTGCAG 2 cut(s) 826, 2010
PsuI RGATCY 3 cut(s) 83, 1128, 1888
PsyI GACNNNGTC 1 cut(s) 109
PvuII CAGCTG 1 cut(s) 566
RsaI GTAC 5 cut(s) 23, 1329, 1539, 2066, 2090
RsaNI GTAC 5 cut(s) 22, 1328, 1538, 2065, 2089
RseI CAYNNNNRTG 2 cut(s) 1770, 1803
SacI GAGCTC 2 cut(s) 80, 383
SaqAI TTAA 7 cut(s) 468, 1041, 1091, 1197, 1376, 1832, 2057
SatI GCNGC 9 cut(s) 32, 364, 567, 662, 761, 785, 822, 1178, 1599
Sau96I GGNCC 3 cut(s) 7, 347, 1144
SchI GAGTC 4 cut(s) 509, 940, 1727, 1932
ScrFI CCNGG 2 cut(s) 1497, 2096
SduI GDGCHC 5 cut(s) 50, 80, 329, 383, 395
SfaNI GCATC 7 cut(s) 532, 723, 1012, 1069, 1210, 1249, 1560
SfcI CTRYAG 2 cut(s) 822, 2006
Sfr274I CTCGAG 1 cut(s) 1026
SfuI TTCGAA 2 cut(s) 69, 1558
SinI GGWCC 2 cut(s) 7, 347
SlaI CTCGAG 1 cut(s) 1026
SmiMI CAYNNNNRTG 2 cut(s) 1770, 1803
SmlI CTYRAG 2 cut(s) 1026, 1162
SmoI CTYRAG 2 cut(s) 1026, 1162
SphI GCATGC 1 cut(s) 179
SseBI AGGCCT 1 cut(s) 1963
SsiI CCGC 8 cut(s) 32, 131, 204, 384, 412, 445, 779, 1911
SspMI CTAG 5 cut(s) 453, 908, 1154, 1181, 1965
SstI GAGCTC 2 cut(s) 80, 383
StuI AGGCCT 1 cut(s) 1963
StyD4I CCNGG 2 cut(s) 1495, 2094
StyI CCWWGG 3 cut(s) 1014, 1414, 1964
TaaI ACNGT 7 cut(s) 7, 169, 814, 979, 992, 1802, 2107
TaiI ACGT 3 cut(s) 62, 119, 1426
TatI WGTACW 2 cut(s) 1327, 2064
TauI GCSGC 1 cut(s) 34
TfiI GAWTC 4 cut(s) 851, 1158, 1247, 2077
Tru1I TTAA 7 cut(s) 468, 1041, 1091, 1197, 1376, 1832, 2057
Tru9I TTAA 7 cut(s) 468, 1041, 1091, 1197, 1376, 1832, 2057
TscAI CASTG 8 cut(s) 46, 373, 1080, 1467, 1694, 1805, 1824, 1989
TseFI GTSAC 2 cut(s) 117, 1678
TseI GCWGC 8 cut(s) 363, 566, 661, 760, 784, 821, 1177, 1598
Tsp45I GTSAC 2 cut(s) 117, 1678
TspDTI ATGAA 5 cut(s) 326, 591, 693, 1239, 1394
TspGWI ACGGA 1 cut(s) 741
TspRI CASTG 8 cut(s) 46, 373, 1080, 1467, 1694, 1805, 1824, 1989
Tth111I GACNNNGTC 1 cut(s) 109
VpaK11BI GGWCC 2 cut(s) 7, 347
XapI RAATTY 6 cut(s) 884, 1186, 1401, 1554, 1586, 1862
XceI RCATGY 3 cut(s) 179, 2001, 2089
XcmI CCANNNNNNNNNTGG 1 cut(s) 1331
XhoI CTCGAG 1 cut(s) 1026
XmaJI CCTAGG 1 cut(s) 1964
XmnI GAANNNNTTC 2 cut(s) 1470, 2076
XspI CTAG 5 cut(s) 453, 908, 1154, 1181, 1965
Zsp2I ATGCAT 2 cut(s) 1084, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.