Pfam:UBN2
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g22952 |
| malus_domestica | MD03G1249400.v1.1 MD12G1162500.v1.1 |
| prunus_persica | Prupe.3G159700_v2.0.a1 Prupe.8G004800_v2.0.a1 |
| pyrus_communis | pycom01g01870 pycom01g13710 pycom15g18800 pycom420g01040 |
| rosa_roxburghii | Rroxscaffold_4G00320150 Rroxscaffold_7G00185690 |
| rosa_wichuraiana | Rw5G007100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 65, 469 |
| AfaI | GTAC | 1 cut(s) | 261 |
| AflIII | ACRYGT | 1 cut(s) | 225 |
| AgsI | TTSAA | 4 cut(s) | 158, 232, 245, 307 |
| AluBI | AGCT | 1 cut(s) | 200 |
| AluI | AGCT | 1 cut(s) | 200 |
| Alw26I | GTCTC | 2 cut(s) | 392, 434 |
| AoxI | GGCC | 1 cut(s) | 6 |
| ApoI | RAATTY | 2 cut(s) | 65, 469 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 143 |
| AsuHPI | GGTGA | 2 cut(s) | 395, 508 |
| BbsI | GAAGAC | 1 cut(s) | 37 |
| BccI | CCATC | 1 cut(s) | 470 |
| BceAI | ACGGC | 3 cut(s) | 149, 251, 267 |
| BcoDI | GTCTC | 2 cut(s) | 392, 434 |
| BfaI | CTAG | 2 cut(s) | 296, 402 |
| BfmI | CTRYAG | 2 cut(s) | 204, 561 |
| BglII | AGATCT | 2 cut(s) | 106, 292 |
| BmsI | GCATC | 3 cut(s) | 84, 124, 163 |
| BpiI | GAAGAC | 1 cut(s) | 37 |
| BpmI | CTGGAG | 1 cut(s) | 91 |
| BpuEI | CTTGAG | 2 cut(s) | 169, 335 |
| BsaAI | YACGTR | 1 cut(s) | 263 |
| BseGI | GGATG | 2 cut(s) | 14, 26 |
| BseMII | CTCAG | 2 cut(s) | 63, 312 |
| BseRI | GAGGAG | 2 cut(s) | 251, 301 |
| BshFI | GGCC | 1 cut(s) | 8 |
| BslFI | GGGAC | 4 cut(s) | 85, 128, 236, 262 |
| BsmAI | GTCTC | 2 cut(s) | 392, 434 |
| BsmFI | GGGAC | 4 cut(s) | 85, 128, 236, 262 |
| BsmI | GAATGC | 2 cut(s) | 145, 572 |
| BsnI | GGCC | 1 cut(s) | 8 |
| Bsp143I | GATC | 4 cut(s) | 106, 292, 324, 578 |
| BspANI | GGCC | 1 cut(s) | 8 |
| BspCNI | CTCAG | 2 cut(s) | 62, 313 |
| BssMI | GATC | 4 cut(s) | 106, 292, 324, 578 |
| Bst6I | CTCTTC | 1 cut(s) | 42 |
| BstBAI | YACGTR | 1 cut(s) | 263 |
| BstDEI | CTNAG | 2 cut(s) | 49, 321 |
| BstF5I | GGATG | 2 cut(s) | 14, 26 |
| BstKTI | GATC | 4 cut(s) | 109, 295, 327, 581 |
| BstMAI | GTCTC | 2 cut(s) | 392, 434 |
| BstMBI | GATC | 4 cut(s) | 106, 292, 324, 578 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 149, 206 |
| BstNSI | RCATGY | 1 cut(s) | 229 |
| BstSFI | CTRYAG | 2 cut(s) | 204, 561 |
| BstV2I | GAAGAC | 1 cut(s) | 37 |
| BstX2I | RGATCY | 2 cut(s) | 106, 292 |
| BstYI | RGATCY | 2 cut(s) | 106, 292 |
| BsuRI | GGCC | 1 cut(s) | 8 |
| BtsCI | GGATG | 2 cut(s) | 14, 26 |
| BtsIMutI | CAGTG | 1 cut(s) | 432 |
| Csp6I | GTAC | 1 cut(s) | 260 |
| CviAII | CATG | 2 cut(s) | 193, 226 |
| CviJI | RGCY | 5 cut(s) | 8, 164, 200, 377, 513 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 164, 200, 377, 513 |
| CviQI | GTAC | 1 cut(s) | 260 |
| DdeI | CTNAG | 2 cut(s) | 49, 321 |
| DpnI | GATC | 4 cut(s) | 108, 294, 326, 580 |
| DpnII | GATC | 4 cut(s) | 106, 292, 324, 578 |
| Eam1104I | CTCTTC | 1 cut(s) | 42 |
| EarI | CTCTTC | 1 cut(s) | 42 |
| EcoRI | GAATTC | 1 cut(s) | 65 |
| FaeI | CATG | 2 cut(s) | 196, 229 |
| FaqI | GGGAC | 4 cut(s) | 85, 128, 236, 262 |
| FatI | CATG | 2 cut(s) | 192, 225 |
| FokI | GGATG | 1 cut(s) | 13 |
| FspBI | CTAG | 2 cut(s) | 296, 402 |
| GsuI | CTGGAG | 1 cut(s) | 91 |
| HaeIII | GGCC | 1 cut(s) | 8 |
| Hin1II | CATG | 2 cut(s) | 196, 229 |
| HincII | GTYRAC | 1 cut(s) | 124 |
| HindII | GTYRAC | 1 cut(s) | 124 |
| HinfI | GANTC | 3 cut(s) | 189, 317, 364 |
| HphI | GGTGA | 2 cut(s) | 395, 508 |
| Hpy166II | GTNNAC | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 3 cut(s) | 322, 549, 578 |
| Hpy188III | TCNNGA | 3 cut(s) | 70, 186, 296 |
| Hpy8I | GTNNAC | 1 cut(s) | 124 |
| HpyAV | CCTTC | 3 cut(s) | 41, 205, 226 |
| HpyCH4IV | ACGT | 1 cut(s) | 262 |
| HpyCH4V | TGCA | 2 cut(s) | 176, 572 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 149, 206 |
| HpyF3I | CTNAG | 2 cut(s) | 49, 321 |
| HpySE526I | ACGT | 1 cut(s) | 262 |
| Hsp92II | CATG | 2 cut(s) | 196, 229 |
| Kzo9I | GATC | 4 cut(s) | 106, 292, 324, 578 |
| LmnI | GCTCC | 2 cut(s) | 72, 197 |
| LpnPI | CCDG | 2 cut(s) | 36, 55 |
| LweI | GCATC | 3 cut(s) | 84, 124, 163 |
| MaeI | CTAG | 2 cut(s) | 296, 402 |
| MaeII | ACGT | 1 cut(s) | 262 |
| MaeIII | GTNAC | 2 cut(s) | 454, 496 |
| MalI | GATC | 4 cut(s) | 108, 294, 326, 580 |
| MboI | GATC | 4 cut(s) | 106, 292, 324, 578 |
| MboII | GAAGA | 2 cut(s) | 29, 37 |
| MflI | RGATCY | 2 cut(s) | 106, 292 |
| MluCI | AATT | 5 cut(s) | 58, 65, 272, 357, 469 |
| MmeI | TCCRAC | 1 cut(s) | 527 |
| MnlI | CCTC | 4 cut(s) | 19, 45, 229, 279 |
| MroXI | GAANNNNTTC | 1 cut(s) | 143 |
| MseI | TTAA | 2 cut(s) | 270, 330 |
| MslI | CAYNNNNRTG | 1 cut(s) | 80 |
| Mva1269I | GAATGC | 2 cut(s) | 145, 572 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 149, 206 |
| NdeII | GATC | 4 cut(s) | 106, 292, 324, 578 |
| NlaIII | CATG | 2 cut(s) | 196, 229 |
| NmuCI | GTSAC | 1 cut(s) | 496 |
| NspI | RCATGY | 1 cut(s) | 229 |
| PciI | ACATGT | 1 cut(s) | 225 |
| PctI | GAATGC | 2 cut(s) | 145, 572 |
| PdmI | GAANNNNTTC | 1 cut(s) | 143 |
| PfeI | GAWTC | 3 cut(s) | 189, 317, 364 |
| Ppu21I | YACGTR | 1 cut(s) | 263 |
| PscI | ACATGT | 1 cut(s) | 225 |
| PsuI | RGATCY | 2 cut(s) | 106, 292 |
| RsaI | GTAC | 1 cut(s) | 261 |
| RsaNI | GTAC | 1 cut(s) | 260 |
| RseI | CAYNNNNRTG | 1 cut(s) | 80 |
| SaqAI | TTAA | 2 cut(s) | 270, 330 |
| Sau3AI | GATC | 4 cut(s) | 106, 292, 324, 578 |
| SetI | ASST | 5 cut(s) | 92, 202, 261, 265, 526 |
| SfaNI | GCATC | 3 cut(s) | 84, 124, 163 |
| SfcI | CTRYAG | 2 cut(s) | 204, 561 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 80 |
| SmlI | CTYRAG | 2 cut(s) | 184, 350 |
| SmoI | CTYRAG | 2 cut(s) | 184, 350 |
| Sse9I | AATT | 5 cut(s) | 58, 65, 272, 357, 469 |
| SspI | AATATT | 2 cut(s) | 391, 592 |
| SspMI | CTAG | 2 cut(s) | 296, 402 |
| TaiI | ACGT | 1 cut(s) | 265 |
| TaqI | TCGA | 2 cut(s) | 411, 465 |
| TasI | AATT | 5 cut(s) | 58, 65, 272, 357, 469 |
| TfiI | GAWTC | 3 cut(s) | 189, 317, 364 |
| Tru1I | TTAA | 2 cut(s) | 270, 330 |
| Tru9I | TTAA | 2 cut(s) | 270, 330 |
| TscAI | CASTG | 1 cut(s) | 439 |
| TseFI | GTSAC | 1 cut(s) | 496 |
| Tsp45I | GTSAC | 1 cut(s) | 496 |
| TspDTI | ATGAA | 2 cut(s) | 326, 567 |
| TspRI | CASTG | 1 cut(s) | 439 |
| XapI | RAATTY | 2 cut(s) | 65, 469 |
| XbaI | TCTAGA | 1 cut(s) | 295 |
| XceI | RCATGY | 1 cut(s) | 229 |
| XmnI | GAANNNNTTC | 1 cut(s) | 143 |
| XspI | CTAG | 2 cut(s) | 296, 402 |