Rw5G010210

aminohydrolase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
11241109 .. 11242072
964 bp
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UTR
Exon/CDS
Intron
Rw5G010210.1

Sequence Viewer

Length: 255 bp
ATGGATTCATATGCTTATCTACCTCCTAATTTTCACCACTCCATTAGGTGTGATGCATTTGCTACCCTTGTGGTGTTTGAAAGAAGGCATTCCTCTCTGGATAATCTACATACTGAGCAGATTGTAGGTTCAACAGACCAGCAGCCACTCCTGGAAACTCCAGGCGAGGTCTTTCAACTACGGAAGCTTATTCCAACTTCTGTATCATATGACTTCAACATCCATATTATGGATTTTGGTAGGGGAATATCTTAA

Protein Analysis

84

Amino Acids

9.62

Weight (kDa)

5.58

Isoelectric Point (pI)

48.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 229
AfiI CCNNNNNNNGG 1 cut(s) 229
AgsI TTSAA 4 cut(s) 80, 132, 176, 217
AjnI CCWGG 2 cut(s) 150, 160
AluBI AGCT 1 cut(s) 187
AluI AGCT 1 cut(s) 187
ApeKI GCWGC 1 cut(s) 142
Asp700I GAANNNNTTC 1 cut(s) 88
AsuHPI GGTGA 1 cut(s) 26
BaeI ACNNNNGTAYC 2 cut(s) 186, 219
BbvI GCAGC 1 cut(s) 154
BciT130I CCWGG 2 cut(s) 152, 162
BisI GCNGC 1 cut(s) 143
BlsI GCNGC 1 cut(s) 144
Bme1390I CCNGG 2 cut(s) 152, 162
BmrFI CCNGG 2 cut(s) 152, 162
BmsI GCATC 1 cut(s) 43
BpmI CTGGAG 1 cut(s) 144
Bsc4I CCNNNNNNNGG 1 cut(s) 229
BseBI CCWGG 2 cut(s) 152, 162
BseGI GGATG 1 cut(s) 219
BseLI CCNNNNNNNGG 1 cut(s) 229
BseMII CTCAG 1 cut(s) 105
BseXI GCAGC 1 cut(s) 154
BslI CCNNNNNNNGG 1 cut(s) 229
BsmI GAATGC 1 cut(s) 88
BspCNI CTCAG 1 cut(s) 106
Bst2UI CCWGG 2 cut(s) 152, 162
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 1 cut(s) 219
BstNI CCWGG 2 cut(s) 152, 162
BstSCI CCNGG 2 cut(s) 150, 160
BstV1I GCAGC 1 cut(s) 154
BtsCI GGATG 1 cut(s) 219
CviJI RGCY 2 cut(s) 145, 187
CviKI_1 RGCY 2 cut(s) 145, 187
DdeI CTNAG 1 cut(s) 114
EcoRII CCWGG 2 cut(s) 150, 160
EcoT22I ATGCAT 1 cut(s) 58
FaiI YATR 7 cut(s) 10, 12, 111, 208, 210, 225, 230
FauNDI CATATG 2 cut(s) 10, 208
Fnu4HI GCNGC 1 cut(s) 143
FokI GGATG 1 cut(s) 206
Fsp4HI GCNGC 1 cut(s) 143
GluI GCNGC 1 cut(s) 143
GsuI CTGGAG 1 cut(s) 144
HindIII AAGCTT 1 cut(s) 185
HinfI GANTC 1 cut(s) 5
HphI GGTGA 1 cut(s) 26
Hpy188III TCNNGA 1 cut(s) 98
HpyAV CCTTC 1 cut(s) 78
HpyCH4V TGCA 1 cut(s) 56
HpyF3I CTNAG 1 cut(s) 114
LpnPI CCDG 6 cut(s) 83, 137, 147, 152, 164, 174
Lsp1109I GCAGC 1 cut(s) 154
LweI GCATC 1 cut(s) 43
MluCI AATT 1 cut(s) 28
MmeI TCCRAC 1 cut(s) 218
MnlI CCTC 3 cut(s) 33, 103, 160
Mph1103I ATGCAT 1 cut(s) 58
MroXI GAANNNNTTC 1 cut(s) 88
MseI TTAA 1 cut(s) 253
MspR9I CCNGG 2 cut(s) 152, 162
Mva1269I GAATGC 1 cut(s) 88
MvaI CCWGG 2 cut(s) 152, 162
NdeI CATATG 2 cut(s) 10, 208
NsiI ATGCAT 1 cut(s) 58
PctI GAATGC 1 cut(s) 88
PdmI GAANNNNTTC 1 cut(s) 88
PfeI GAWTC 1 cut(s) 5
PflMI CCANNNNNTGG 1 cut(s) 229
PfoI TCCNGGA 1 cut(s) 150
PkrI GCNGC 1 cut(s) 144
Psp6I CCWGG 2 cut(s) 150, 160
PspGI CCWGG 2 cut(s) 150, 160
SaqAI TTAA 1 cut(s) 253
SatI GCNGC 1 cut(s) 143
ScrFI CCNGG 2 cut(s) 152, 162
SetI ASST 5 cut(s) 25, 50, 130, 171, 189
SfaNI GCATC 1 cut(s) 43
SgeI CNNG 8 cut(s) 80, 110, 151, 163, 164, 173, 174, 178
Sse9I AATT 1 cut(s) 28
StyD4I CCNGG 2 cut(s) 150, 160
TasI AATT 1 cut(s) 28
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 1 cut(s) 253
Tru9I TTAA 1 cut(s) 253
TseI GCWGC 1 cut(s) 142
TspGWI ACGGA 1 cut(s) 196
Van91I CCANNNNNTGG 1 cut(s) 229
XmnI GAANNNNTTC 1 cut(s) 88
Zsp2I ATGCAT 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.