Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001746

Physical Location & Seq

Genomic Coordinates Reverse (-)

61842850 .. 61849918

Gene Structure 7069 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G037570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGGAGGAGCCTACAATCCTGCAGCAGTGTCCAAACACGGTCACCATCCGGCGCAACCTTCACCGGAGAGCGAGGCCCCAGACTACTCCGGCAACCGCAGCCGCCGGAATCCCGTCTTGTACTGTGCCGAAAGTCCCTTTCCCGACCGAAGAAATTCTCTCCATGGACATATCCAGCACGAAACCTGACCCGAGAATCTCAGAGCCGTCGGACAAAAGGAGCGGCGTCGTCGGAGATTTAAAGGCCAGATCCAAAAACGTTTGGCCGCAAAACCCTAAGAACGCCGCGGCGAGGGAACAGAAGAAGAAGAAAAGCCCTAACGCCGAGGTCTGTGTCAAGGTGAACAGTGCTCGCTCGGTGACTGTGGCTCCGCCACTAGCCTTGCAGGAACCTAACCGGCTCAAGTCTGAGGTCTACGATGGCTTCTCACACGTCTTCTCCTCCGATTCTTCTCAGGAGGAGGTGTATGAGATGATGGTGAAGCCATTGGTGGAAGACTTCTTGAAGGGCAAGAGTGGAATGTTGGCTGCAATGGGGCCTAGTGGCTCCGGCAAGAGTCATACAGTTTTCGGTTGCCCCAGGGAGCCCGGAATGGTACCACTTGCGCTTCAACACCTATTCAAGCGAGTTCCGGATAGCATTACCGAGTCTCCGAGGTCATTTTTCATATCAATGTTTGAAATAAGTACCGAACGAGGTAAAGCAGAGAAATGGATTGATTTATCTCCAAATGGGGGTGAAATAACTATGCAACAATCTAACCTGAAAGGCCTACAAGAGATAGCCATATCTGATACTCGACAGGCAGAATCCTTAGTTGCGCAGGCAATGCAAAAACGTGCCACTGCTACGACAAATTCAAACAGCCAGTCAAGTCGTTCACAGTGTATTATTAACATTCGAGGTGTTGCCGACAAGTTTGATGGAGAGGATAACAATAAAGCAAATGAAGTCGTCCTGAGTATTGTTGACCTTGCTGGAGCTGAAAGAGAAAAGAGAACTGGGAATCAGGGAGCAAGGTTGCTTGAAAGTAATTTCATCAACAACACATCCATGGTTTTTGGCTTGTGCTTGAGATCCTTATTGGAGCATCAGAAGAACCCTAAGAAGCCAATGCAAAAGCACTTTCAGAACTCATTGTTGACCAAGTACTTGAGAGACTATTTGGAAGGCAAGAAGAGGATGTCACTGATTTTAACAGTAAAATCTGGAGAAGAAGATTATCGTGATACATCTCACCTGCTAAGACAGGCCTCACCTTATATGGAAATCAAGTTTAATAATGCTGAAGACCCTTCAAATATTCCGAACAAAAGGCAAATCCAGTCTTTGTCCAGAACCGAGCAGCGCAAAAGAATGAAATTAACCGGTTCTGAGTCTTGCGTGATTGAACAAGAGAAAAGCATTGAATCCGAAATTGGACTAACCAAGGAAGCGGCACAAAGAATCTACAAGGTGGAATTAAGTAGTGGTTCAAAACCGTGTAATGTTGACACTGCAGATGGAGAGACAAACCATCAGATTATGCAGAGTTTTGCTAAAGCTATATGGAATGTTTTGAAGGAGTACAACAAAAAACTAAAGGTGGCGGATGATGAAATCAAGCATCTCAGGGAAAGTCTTATGACTGAAAAAACAAGACATCTTGAGCTGCAAAAAGAGCTGAAGGATATAAAGTCCTGCTGTACATGCTCCCACATAAAATCCAATGTTGATCAGCCTTTCTACTCAGGGAGATGTGACAACAATGGCACTCCCAAAAGATTGGACTTTACTTCAAAAGAGGATCACAATATTTTCTCCGAGGTGCAGGGCTTTGGGTGTGTTGACAATGAACCCGATGTTGACGCAACTATAGTTCCAAGCCAGACTGATGAAAAACAAAGCGATGCTACTGTGAAAACTTCGGATGTTGGTGAGGTCGGTAATCCTTGCCTTGGACCTGGAAACACAGACCAGTGGAATCATCAGATATGTGAGGGCTTCCCTGGCAGTGGACATAGTGCGGAAGATGGGTGCGAGTCTAAATGTGTACAAATAGAGGATAATTATCCTAATGCAGATGTAGCAGGTCTTTCAGTGAACTCTTCTGAGCTGGTTGTTATTCAAAGAAAGGATAGCTGCTCATCAGTGGAGCTTGATGACCTGCTAAGTGAGGAGGATGAGGAATCGTCGGATGTTGTATATACTGAACATTGCAATAGCGTTGACCGGCGGTCTAGACTTGATACTTCTTCTGAGGCTTTGCATATGGACAAGTCAGAAAGGAAAGTTTTGCATGCGGCATCTCTGTCGCCAAGTTCTAATGTTAAGAATGAGATTGAGGAGTCAAAGGAATCATTTGATTTGCCAACATTGCCGAAGGAAGGTGTTGTTTCAACTAAAAAGTGTAGCATTATTGATGTGCCTGTTCGTGAACCTACAGTTGATATATCTACCAAGCTGGAGAAACCAAAAAGGAGACTGTTGCCCGCCTCATCTACATTACTAAGAAATTTCAGTACTTTGGACATTGAGGATGGCAATGAGAAACCAAAGGGCGGAAAGAAATTAGCTGCAGAAGGAAGAACAAGAACGCAAGGTAGCATCTCTCTTGTGCGCTTGCTTCAGAGCAATCTCCGTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0008150 GO:0008574 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048285 GO:0051225 GO:0051231 GO:0070925 GO:0071840 GO:0090307 GO:0098813 GO:0140014 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

875

Amino Acids

97.04

Weight (kDa)

6.44

Isoelectric Point (pI)

55.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	110 - 212	1.6e-06	Microtubule binding
Kinesin	PF00225	129 - 420	5.1e-50	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20060 AT1G20060 AT1G20060 AT1G20060 AT1G20060 AT1G20060 AT1G20060 AT1G20060 AT1G20060 AT1G20060
fragaria_vesca	FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_2g38240 FvH4_4g19391 FvH4_5g38380
malus_domestica	MD08G1010800.v1.1
prunus_persica	Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.1G363400_v2.0.a1 Prupe.8G272100_v2.0.a1 Prupe.8G272100_v2.0.a1
pyrus_communis	pycom08g00960
rosa_chinensis	RchiOBHm_Chr6g0303131
rosa_laevigata	RLG00000011105
rosa_multiflora	Rmu_co8047954.1_g000001 Rmu_sc0001706.1_g000038 Rmu_sc0028461.1_g000001
rosa_roxburghii	Rroxscaffold_3G00265850 Rroxscaffold_7G00164990
rosa_rugosa	Rorug06G0319300
rosa_samantha	Rh6AG433300 Rh6BG469400 Rh6CG445600 Rh6DG432400
rosa_wichuraiana	Rw6G037570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1248
Acc16I	TGCGCA	1 cut(s)	822
Acc36I	ACCTGC	3 cut(s)	1248, 2060, 2154
Acc65I	GGTACC	1 cut(s)	595
AccB1I	GGYRCC	1 cut(s)	595
AccBSI	CCGCTC	1 cut(s)	222
AccI	GTMKAC	1 cut(s)	414
AccII	CGCG	1 cut(s)	287
AccIII	TCCGGA	1 cut(s)	631
AclI	AACGTT	1 cut(s)	258
AclWI	GGATC	3 cut(s)	243, 1071, 1794
AcoI	YGGCCR	1 cut(s)	263
AcsI	RAATTY	3 cut(s)	153, 856, 2494
AcuI	CTGAAG	3 cut(s)	1308, 1685, 2591
AcyI	GRCGYC	1 cut(s)	225
AfaI	GTAC	8 cut(s)	121, 597, 688, 1151, 1568, 1687, 2034, 2503
AfiI	CCNNNNNNNGG	6 cut(s)	291, 734, 1937, 1994, 2366, 2540
AflIII	ACRYGT	1 cut(s)	430
AgeI	ACCGGT	1 cut(s)	1367
AhdI	GACNNNNNGTC	1 cut(s)	2215
AjiI	CACGTC	1 cut(s)	433
AjnI	CCWGG	3 cut(s)	578, 1942, 1987
AjuI	GAANNNNNNNTTGG	2 cut(s)	1401, 1433
AluBI	AGCT	9 cut(s)	983, 1544, 1651, 1663, 2095, 2121, 2137, 2443, 2555
AluI	AGCT	9 cut(s)	983, 1544, 1651, 1663, 2095, 2121, 2137, 2443, 2555
Alw21I	GWGCWC	1 cut(s)	352
Alw26I	GTCTC	4 cut(s)	654, 1152, 1502, 2455
AlwI	GGATC	3 cut(s)	243, 1071, 1794
Ama87I	CYCGRG	1 cut(s)	190
Aor13HI	TCCGGA	1 cut(s)	631
AoxI	GGCC	6 cut(s)	74, 243, 263, 536, 769, 1251
ApeKI	GCWGC	7 cut(s)	22, 98, 527, 1345, 1651, 2121, 2555
ApoI	RAATTY	3 cut(s)	153, 856, 2494
ArsI	GACNNNNNNTTYG	2 cut(s)	854, 886
AsiGI	ACCGGT	1 cut(s)	1367
Asp700I	GAANNNNTTC	1 cut(s)	153
Asp718I	GGTACC	1 cut(s)	595
AspLEI	GCGC	5 cut(s)	54, 607, 823, 1350, 2601
AspS9I	GGNCC	3 cut(s)	75, 536, 1940
AsuC2I	CCSGG	1 cut(s)	588
AsuHPI	GGTGA	9 cut(s)	34, 53, 352, 370, 490, 749, 1229, 1248, 1928
AvaI	CYCGRG	1 cut(s)	190
AvaII	GGWCC	1 cut(s)	1940
BanI	GGYRCC	1 cut(s)	595
BanII	GRGCYC	1 cut(s)	588
BbsI	GAAGAC	3 cut(s)	427, 501, 1296
Bbv12I	GWGCWC	1 cut(s)	352
BbvI	GCAGC	7 cut(s)	34, 110, 514, 1357, 1638, 2108, 2542
BccI	CCATC	8 cut(s)	53, 413, 469, 917, 1496, 1524, 2006, 2513
BceAI	ACGGC	1 cut(s)	190
BcgI	CGANNNNNNTGC	2 cut(s)	2274, 2308
BciT130I	CCWGG	3 cut(s)	580, 1944, 1989
BclI	TGATCA	1 cut(s)	1714
BcnI	CCSGG	1 cut(s)	588
BcoDI	GTCTC	4 cut(s)	654, 1152, 1502, 2455
BfaI	CTAG	3 cut(s)	377, 540, 2220
BfmI	CTRYAG	5 cut(s)	20, 1497, 1854, 2421, 2556
BfuAI	ACCTGC	3 cut(s)	1248, 2060, 2154
BmcAI	AGTACT	2 cut(s)	1151, 2503
Bme1390I	CCNGG	4 cut(s)	580, 588, 1944, 1989
Bme18I	GGWCC	1 cut(s)	1940
BmeRI	GACNNNNNGTC	1 cut(s)	2215
BmeT110I	CYCGRG	1 cut(s)	190
BmgBI	CACGTC	1 cut(s)	433
BmgT120I	GGNCC	3 cut(s)	75, 536, 1940
BmiI	GGNNCC	8 cut(s)	9, 77, 369, 390, 537, 547, 585, 597
BmrFI	CCNGG	4 cut(s)	580, 588, 1944, 1989
BmrI	ACTGGG	1 cut(s)	1011
BmsI	GCATC	5 cut(s)	1099, 1615, 1879, 2294, 2595
BmuI	ACTGGG	1 cut(s)	1011
BpiI	GAAGAC	3 cut(s)	427, 501, 1296
BpmI	CTGGAG	3 cut(s)	999, 1230, 2465
BpuEI	CTTGAG	4 cut(s)	386, 1093, 1174, 1667
BpuMI	CCSGG	1 cut(s)	588
BsaBI	GATNNNNATC	1 cut(s)	2049
BsaHI	GRCGYC	1 cut(s)	225
BsaWI	WCCGGW	3 cut(s)	63, 631, 1367
BsaXI	ACNNNNNCTCC	8 cut(s)	352, 382, 422, 449, 452, 479, 634, 664
Bsc4I	CCNNNNNNNGG	6 cut(s)	291, 734, 1937, 1994, 2366, 2540
Bse118I	RCCGGY	3 cut(s)	396, 1367, 2211
Bse1I	ACTGG	4 cut(s)	868, 1006, 1324, 1957
Bse3DI	GCAATG	5 cut(s)	537, 834, 2194, 2354, 2530
Bse8I	GATNNNNATC	1 cut(s)	2049
BseAI	TCCGGA	1 cut(s)	631
BseBI	CCWGG	3 cut(s)	580, 1944, 1989
BseGI	GGATG	8 cut(s)	45, 1049, 1188, 1597, 1915, 2167, 2182, 2524
BseJI	GATNNNNATC	1 cut(s)	2049
BseLI	CCNNNNNNNGG	6 cut(s)	291, 734, 1937, 1994, 2366, 2540
BseMI	GCAATG	5 cut(s)	537, 834, 2194, 2354, 2530
BseMII	CTCAG	9 cut(s)	213, 399, 467, 950, 1365, 1624, 1743, 2082, 2229
BseNI	ACTGG	4 cut(s)	868, 1006, 1324, 1957
BseRI	GAGGAG	5 cut(s)	20, 430, 473, 2171, 2339
BseXI	GCAGC	7 cut(s)	34, 110, 514, 1357, 1638, 2108, 2542
BsgI	GTGCAG	1 cut(s)	1829
Bsh1236I	CGCG	1 cut(s)	287
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	6 cut(s)	76, 245, 265, 538, 771, 1253
BshNI	GGYRCC	1 cut(s)	595
BshTI	ACCGGT	1 cut(s)	1367
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	1 cut(s)	352
BsiHKCI	CYCGRG	1 cut(s)	190
BslFI	GGGAC	1 cut(s)	119
BslI	CCNNNNNNNGG	6 cut(s)	291, 734, 1937, 1994, 2366, 2540
BsmAI	GTCTC	4 cut(s)	654, 1152, 1502, 2455
BsmFI	GGGAC	1 cut(s)	119
BsnI	GGCC	6 cut(s)	76, 245, 265, 538, 771, 1253
BsoBI	CYCGRG	1 cut(s)	190
Bsp1286I	GDGCHC	2 cut(s)	352, 588
Bsp13I	TCCGGA	1 cut(s)	631
Bsp1407I	TGTACA	2 cut(s)	1685, 2032
Bsp143I	GATC	4 cut(s)	248, 1076, 1714, 1786
Bsp19I	CCATGG	2 cut(s)	162, 1053
BspANI	GGCC	6 cut(s)	76, 245, 265, 538, 771, 1253
BspCNI	CTCAG	9 cut(s)	212, 400, 466, 951, 1366, 1623, 1742, 2083, 2230
BspEI	TCCGGA	1 cut(s)	631
BspFNI	CGCG	1 cut(s)	287
BspLI	GGNNCC	8 cut(s)	9, 77, 369, 390, 537, 547, 585, 597
BspMAI	CTGCAG	3 cut(s)	24, 1501, 2560
BspMI	ACCTGC	3 cut(s)	1248, 2060, 2154
BspPI	GGATC	3 cut(s)	243, 1071, 1794
BspT107I	GGYRCC	1 cut(s)	595
BsrBI	CCGCTC	1 cut(s)	222
BsrDI	GCAATG	5 cut(s)	537, 834, 2194, 2354, 2530
BsrFI	RCCGGY	3 cut(s)	396, 1367, 2211
BsrGI	TGTACA	2 cut(s)	1685, 2032
BsrI	ACTGG	4 cut(s)	868, 1006, 1324, 1957
BssAI	RCCGGY	3 cut(s)	396, 1367, 2211
BssMI	GATC	4 cut(s)	248, 1076, 1714, 1786
BssNI	GRCGYC	1 cut(s)	225
BssT1I	CCWWGG	4 cut(s)	162, 1053, 1428, 1936
Bst2UI	CCWGG	3 cut(s)	580, 1944, 1989
Bst6I	CTCTTC	2 cut(s)	1172, 2092
BstACI	GRCGYC	1 cut(s)	225
BstAPI	GCANNNNNTGC	1 cut(s)	829
BstAUI	TGTACA	2 cut(s)	1685, 2032
BstC8I	GCNNGC	5 cut(s)	352, 825, 2280, 2472, 2603
BstDSI	CCRYGG	3 cut(s)	162, 285, 1053
BstEII	GGTNACC	1 cut(s)	40
BstF5I	GGATG	8 cut(s)	45, 1049, 1188, 1597, 1915, 2167, 2182, 2524
BstFNI	CGCG	1 cut(s)	287
BstHHI	GCGC	5 cut(s)	54, 607, 823, 1350, 2601
BstKTI	GATC	4 cut(s)	251, 1079, 1717, 1789
BstMAI	GTCTC	4 cut(s)	654, 1152, 1502, 2455
BstMBI	GATC	4 cut(s)	248, 1076, 1714, 1786
BstMCI	CGRYCG	1 cut(s)	147
BstMWI	GCNNNNNNNGC	7 cut(s)	98, 829, 1660, 1689, 1989, 2066, 2356
BstNI	CCWGG	3 cut(s)	580, 1944, 1989
BstNSI	RCATGY	2 cut(s)	1692, 2282
BstPI	GGTNACC	1 cut(s)	40
BstSCI	CCNGG	4 cut(s)	578, 586, 1942, 1987
BstSFI	CTRYAG	5 cut(s)	20, 1497, 1854, 2421, 2556
BstUI	CGCG	1 cut(s)	287
BstV1I	GCAGC	7 cut(s)	34, 110, 514, 1357, 1638, 2108, 2542
BstV2I	GAAGAC	3 cut(s)	427, 501, 1296
BstX2I	RGATCY	2 cut(s)	248, 1076
BstXI	CCANNNNNNTGG	1 cut(s)	1765
BstYI	RGATCY	2 cut(s)	248, 1076
BsuRI	GGCC	6 cut(s)	76, 245, 265, 538, 771, 1253
BtgI	CCRYGG	3 cut(s)	162, 285, 1053
BtgZI	GCGATG	1 cut(s)	1902
BtrI	CACGTC	1 cut(s)	433
BtsCI	GGATG	8 cut(s)	45, 1049, 1188, 1597, 1915, 2167, 2182, 2524
BtsI	GCAGTG	4 cut(s)	32, 843, 1494, 1999
BveI	ACCTGC	3 cut(s)	1248, 2060, 2154
Cac8I	GCNNGC	5 cut(s)	352, 825, 2280, 2472, 2603
CfoI	GCGC	5 cut(s)	54, 607, 823, 1350, 2601
Cfr10I	RCCGGY	3 cut(s)	396, 1367, 2211
Cfr13I	GGNCC	3 cut(s)	75, 536, 1940
Cfr42I	CCGCGG	1 cut(s)	288
CseI	GACGC	2 cut(s)	214, 1856
Csp6I	GTAC	8 cut(s)	120, 596, 687, 1150, 1567, 1686, 2033, 2502
CspAI	ACCGGT	1 cut(s)	1367
CspCI	CAANNNNNGTGG	2 cut(s)	363, 398
CviAII	CATG	4 cut(s)	163, 1054, 1689, 2279
CviQI	GTAC	8 cut(s)	120, 596, 687, 1150, 1567, 1686, 2033, 2502
DpnI	GATC	4 cut(s)	250, 1078, 1716, 1788
DpnII	GATC	4 cut(s)	248, 1076, 1714, 1786
DraI	TTTAAA	1 cut(s)	240
DriI	GACNNNNNGTC	1 cut(s)	2215
EaeI	YGGCCR	1 cut(s)	263
Eam1104I	CTCTTC	2 cut(s)	1172, 2092
Eam1105I	GACNNNNNGTC	1 cut(s)	2215
EarI	CTCTTC	2 cut(s)	1172, 2092
EciI	GGCGGA	3 cut(s)	360, 1604, 2556
Eco130I	CCWWGG	4 cut(s)	162, 1053, 1428, 1936
Eco147I	AGGCCT	2 cut(s)	771, 1253
Eco24I	GRGCYC	1 cut(s)	588
Eco47I	GGWCC	1 cut(s)	1940
Eco57I	CTGAAG	3 cut(s)	1308, 1685, 2591
Eco88I	CYCGRG	1 cut(s)	190
Eco91I	GGTNACC	1 cut(s)	40
EcoO109I	RGGNCCY	2 cut(s)	75, 536
EcoO65I	GGTNACC	1 cut(s)	40
EcoRII	CCWGG	3 cut(s)	578, 1942, 1987
EcoT14I	CCWWGG	4 cut(s)	162, 1053, 1428, 1936
EcoT38I	GRGCYC	1 cut(s)	588
ErhI	CCWWGG	4 cut(s)	162, 1053, 1428, 1936
FaeI	CATG	4 cut(s)	166, 1057, 1692, 2282
FaqI	GGGAC	1 cut(s)	119
FatI	CATG	4 cut(s)	162, 1053, 1688, 2278
FauI	CCCGC	1 cut(s)	2479
FauNDI	CATATG	1 cut(s)	2250
FbaI	TGATCA	1 cut(s)	1714
FblI	GTMKAC	1 cut(s)	414
FokI	GGATG	8 cut(s)	32, 1036, 1195, 1604, 1922, 2174, 2189, 2531
FriOI	GRGCYC	1 cut(s)	588
FspBI	CTAG	3 cut(s)	377, 540, 2220
FspI	TGCGCA	1 cut(s)	822
GlaI	GCGC	5 cut(s)	53, 606, 822, 1349, 2600
GsuI	CTGGAG	3 cut(s)	999, 1230, 2465
HaeIII	GGCC	6 cut(s)	76, 245, 265, 538, 771, 1253
HgaI	GACGC	2 cut(s)	214, 1856
HhaI	GCGC	5 cut(s)	54, 607, 823, 1350, 2601
Hin1I	GRCGYC	1 cut(s)	225
Hin1II	CATG	4 cut(s)	166, 1057, 1692, 2282
Hin6I	GCGC	5 cut(s)	52, 605, 821, 1348, 2599
HinP1I	GCGC	5 cut(s)	52, 605, 821, 1348, 2599
HincII	GTYRAC	6 cut(s)	970, 1143, 1492, 1828, 1846, 2209
HindII	GTYRAC	6 cut(s)	970, 1143, 1492, 1828, 1846, 2209
HphI	GGTGA	9 cut(s)	34, 53, 352, 370, 490, 749, 1229, 1248, 1928
Hpy99I	CGWCG	4 cut(s)	211, 230, 233, 2176
HpyAV	CCTTC	9 cut(s)	68, 499, 1163, 1305, 1555, 1660, 2356, 2360, 2555
HpyCH4IV	ACGT	3 cut(s)	258, 432, 838
HpyF10VI	GCNNNNNNNGC	7 cut(s)	98, 829, 1660, 1689, 1989, 2066, 2356
HpySE526I	ACGT	3 cut(s)	258, 432, 838
Hsp92I	GRCGYC	1 cut(s)	225
Hsp92II	CATG	4 cut(s)	166, 1057, 1692, 2282
HspAI	GCGC	5 cut(s)	52, 605, 821, 1348, 2599
Kpn2I	TCCGGA	1 cut(s)	631
KpnI	GGTACC	1 cut(s)	599
Ksp22I	TGATCA	1 cut(s)	1714
KspI	CCGCGG	1 cut(s)	288
Kzo9I	GATC	4 cut(s)	248, 1076, 1714, 1786
Lsp1109I	GCAGC	7 cut(s)	34, 110, 514, 1357, 1638, 2108, 2542
LweI	GCATC	5 cut(s)	1099, 1615, 1879, 2294, 2595
MaeI	CTAG	3 cut(s)	377, 540, 2220
MaeII	ACGT	3 cut(s)	258, 432, 838
MaeIII	GTNAC	4 cut(s)	40, 358, 1185, 1739
MalI	GATC	4 cut(s)	250, 1078, 1716, 1788
MbiI	CCGCTC	1 cut(s)	222
MboI	GATC	4 cut(s)	248, 1076, 1714, 1786
MflI	RGATCY	2 cut(s)	248, 1076
MhlI	GDGCHC	2 cut(s)	352, 588
MluCI	AATT	9 cut(s)	153, 856, 1033, 1361, 1416, 1460, 2047, 2494, 2549
MlyI	GAGTC	5 cut(s)	565, 656, 1385, 2030, 2336
MmeI	TCCRAC	3 cut(s)	189, 211, 2154
MroI	TCCGGA	1 cut(s)	631
MroXI	GAANNNNTTC	1 cut(s)	153
MseI	TTAA	7 cut(s)	239, 894, 1196, 1278, 1364, 1463, 2310
MslI	CAYNNNNRTG	2 cut(s)	671, 1052
MspA1I	CMGCKG	1 cut(s)	287
MspR9I	CCNGG	4 cut(s)	580, 588, 1944, 1989
MvaI	CCWGG	3 cut(s)	580, 1944, 1989
MvnI	CGCG	1 cut(s)	287
MwoI	GCNNNNNNNGC	7 cut(s)	98, 829, 1660, 1689, 1989, 2066, 2356
NciI	CCSGG	1 cut(s)	588
NcoI	CCATGG	2 cut(s)	162, 1053
NdeI	CATATG	1 cut(s)	2250
NdeII	GATC	4 cut(s)	248, 1076, 1714, 1786
NlaIII	CATG	4 cut(s)	166, 1057, 1692, 2282
NlaIV	GGNNCC	8 cut(s)	9, 77, 369, 390, 537, 547, 585, 597
NmeAIII	GCCGAG	1 cut(s)	349
NmuCI	GTSAC	4 cut(s)	40, 358, 1185, 1739
NsbI	TGCGCA	1 cut(s)	822
NspI	RCATGY	2 cut(s)	1692, 2282
PaeI	GCATGC	1 cut(s)	2282
PaqCI	CACCTGC	1 cut(s)	1248
PasI	CCCWGGG	1 cut(s)	579
PceI	AGGCCT	2 cut(s)	771, 1253
PdmI	GAANNNNTTC	1 cut(s)	153
PinAI	ACCGGT	1 cut(s)	1367
PleI	GAGTC	5 cut(s)	564, 655, 1384, 2029, 2335
PpsI	GAGTC	5 cut(s)	564, 655, 1384, 2029, 2335
Psp1406I	AACGTT	1 cut(s)	258
Psp6I	CCWGG	3 cut(s)	578, 1942, 1987
PspEI	GGTNACC	1 cut(s)	40
PspGI	CCWGG	3 cut(s)	578, 1942, 1987
PspN4I	GGNNCC	8 cut(s)	9, 77, 369, 390, 537, 547, 585, 597
PspPI	GGNCC	3 cut(s)	75, 536, 1940
PstI	CTGCAG	3 cut(s)	24, 1501, 2560
PsuI	RGATCY	2 cut(s)	248, 1076
RsaI	GTAC	8 cut(s)	121, 597, 688, 1151, 1568, 1687, 2034, 2503
RsaNI	GTAC	8 cut(s)	120, 596, 687, 1150, 1567, 1686, 2033, 2502
RseI	CAYNNNNRTG	2 cut(s)	671, 1052
SacII	CCGCGG	1 cut(s)	288
SaqAI	TTAA	7 cut(s)	239, 894, 1196, 1278, 1364, 1463, 2310
Sau3AI	GATC	4 cut(s)	248, 1076, 1714, 1786
Sau96I	GGNCC	3 cut(s)	75, 536, 1940
ScaI	AGTACT	2 cut(s)	1151, 2503
SchI	GAGTC	5 cut(s)	565, 656, 1385, 2030, 2336
ScrFI	CCNGG	4 cut(s)	580, 588, 1944, 1989
SduI	GDGCHC	2 cut(s)	352, 588
SfaNI	GCATC	5 cut(s)	1099, 1615, 1879, 2294, 2595
SfcI	CTRYAG	5 cut(s)	20, 1497, 1854, 2421, 2556
Sfr303I	CCGCGG	1 cut(s)	288
SgrBI	CCGCGG	1 cut(s)	288
SinI	GGWCC	1 cut(s)	1940
SmiMI	CAYNNNNRTG	2 cut(s)	671, 1052
SmlI	CTYRAG	4 cut(s)	401, 1072, 1153, 1646
SmoI	CTYRAG	4 cut(s)	401, 1072, 1153, 1646
SphI	GCATGC	1 cut(s)	2282
Sse9I	AATT	9 cut(s)	153, 856, 1033, 1361, 1416, 1460, 2047, 2494, 2549
SseBI	AGGCCT	2 cut(s)	771, 1253
SspI	AATATT	2 cut(s)	1303, 1795
SspMI	CTAG	3 cut(s)	377, 540, 2220
StuI	AGGCCT	2 cut(s)	771, 1253
StyD4I	CCNGG	4 cut(s)	578, 586, 1942, 1987
StyI	CCWWGG	4 cut(s)	162, 1053, 1428, 1936
TaiI	ACGT	3 cut(s)	261, 435, 841
TaqI	TCGA	2 cut(s)	799, 901
TaqII	GACCGA	1 cut(s)	161
TasI	AATT	9 cut(s)	153, 856, 1033, 1361, 1416, 1460, 2047, 2494, 2549
TatI	WGTACW	6 cut(s)	119, 1149, 1566, 1685, 2032, 2501
TauI	GCSGC	7 cut(s)	104, 225, 268, 287, 290, 1439, 2285
Tru1I	TTAA	7 cut(s)	239, 894, 1196, 1278, 1364, 1463, 2310
Tru9I	TTAA	7 cut(s)	239, 894, 1196, 1278, 1364, 1463, 2310
TseFI	GTSAC	4 cut(s)	40, 358, 1185, 1739
TseI	GCWGC	7 cut(s)	22, 98, 527, 1345, 1651, 2121, 2555
Tsp45I	GTSAC	4 cut(s)	40, 358, 1185, 1739
TspDTI	ATGAA	7 cut(s)	655, 963, 1027, 1373, 1611, 1848, 1890
TspGWI	ACGGA	1 cut(s)	2609
VpaK11BI	GGWCC	1 cut(s)	1940
XapI	RAATTY	3 cut(s)	153, 856, 2494
XbaI	TCTAGA	1 cut(s)	2219
XceI	RCATGY	2 cut(s)	1692, 2282
XmiI	GTMKAC	1 cut(s)	414
XmnI	GAANNNNTTC	1 cut(s)	153
XspI	CTAG	3 cut(s)	377, 540, 2220
ZrmI	AGTACT	2 cut(s)	1151, 2503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.