Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004494

Physical Location & Seq

Genomic Coordinates Forward (+)

500919 .. 504635

Gene Structure 3717 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G000620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGACGACGAGGAAGAAGGTGCAGAAGAAGTGCAAAATCAGAGGCTTCACTCTTAAAGTCGACGCCCTCGAAGAGATTCTATCCTTCGTCTCCCGATTCGACGATTCCGACCCCGACGGCGCCATCGATGTCGTCCTCGAGCAGCTCCAGCTCCAACCCCTTAAGTCTTCCATAATCGACAAGCAGACGGTCCAGAGCGTCGTCAGCATTTTATTACAGGCTGACACCGCCGTAGGCGACGAAACCCTAGGTGGTGGTTTGGGCGTATGCGACGCCTTCTTGGTCCCAAAGTTCCGATATGATCCGATCAAGAAGATTTTCTACAAGCCTAGTGAGATCCAGCCGCCGATTCATGGAAATGCGTCCGCGAAAGCGGCTCTGTATAAGGATAGGTTTCTCTTGATCTCCCAGAGGCTCTCTCGCCATCAGCATTTTGCCAAACGAGCCTTTGATTCTGAAATGTCTGATTTCGGAAGCTGTGAGATATCTCAAATTCAGTCTCTGGTTGGACAAACCGGAAGGAGATGGGTGATGGGTTTGATATCACAGTTGGAAGATGGTCATTTTTACCTGGAAGACCTTACTGCATCGGTGGAAATCAACTTATCCAATGCAATATCCTTTATTGACTCTCTTCTGATAATTTTCTTTGACAATACATACAAGATAACTACAGGATTCTTTACAGAGAACACAATGGTTGTCGCAGAAGGCGAGATGCTTTTAGAAGGTGTTTTTCAGGTTATTACTTGTGGATTTCCTCCATTAGAGGACAGAGACATGTCAGTCAAATTGCTTGCGGGACATGACTTCTTTGGTGGTGGTATACTAACAAAAGAAGAGACACTCAGACTTTCAGAACTGGAAAAGAGAGCAGTTAATGACATGTTTGTCATACTCTCTGACATTTGGCTGGACAGTGAAGAGGCTATGGGAAAGCTAGAGAGGATCCTTGATGGTTACGAGAACCAGGAAGTGGTACCTTCCTTATTTGTGTTTATGGGAAATTTTAGTTCTCACCCTTGCAACCTTTCCTTCCGCCCCTCTAGTCTCAGGTTGCAGTTTGGCAAGCTAGGACAAATGATTGCAGCCCATCAACAGCTAACAAAGCGTAGCCGTTTTCTGTTTATCCCAGGTCCTGATGACCCAGGTCCTTCGAAAGTTTTACCCAGATGTGCTTTACCAAAATATATAACAGAAGAGCTTCAAAAACACATACCAAATGCCATGTTTTCAAGTAATCCTTGCAGAATAAAGTTCTATACCCAAGAGCTTGTATTTTTTCGTCAGGATTTACTGTACAGAATGCGCCGTTCGTGCCTGATCCCCCCTTCTACAGAAGAAACTGATGATCCCTTTGAGCATCTTGTTGCTACAATAACCCATCAAAGCCATCTATGCCCACTCCCTCTTATTGTACAACCCATTATCTGGAATTATGATCACTCACTCTATCTCTATCCAACTCCACATACGATAGTTTTGGGTGACAGAAGTGAGCAGAAGGCTTTCAAATACACAGGAATCACTTGTTTTAATCCTGGTTCCTTCTCAAGAGAGGGCACATTTGTGGCATATTATCCTTGTACTCAGGAAGTTGAATTGTCAGCCTTAGAGGATTCTGATTCGATGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000731 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0008622 GO:0009058 GO:0009059 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0018130 GO:0019438 GO:0019899 GO:0019985 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0042575 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048316 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051302 GO:0051716 GO:0051781 GO:0061458 GO:0061695 GO:0065007 GO:0070013 GO:0070182 GO:0071704 GO:0071897 GO:0090304 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 ko03410 ko03420 ko05166 map00230 map00240 map01100 map03030 map03410 map03420 map05166

Pfam Domains

Protein Families

DNA_pol_E_B Dpoe2NT

Protein Analysis

545

Amino Acids

61.66

Weight (kDa)

5.42

Isoelectric Point (pI)

49.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dpoe2NT	PF12213	4 - 68	1.4e-08	DNA polymerases epsilon N terminal
DNA_pol_E_B	PF04042	297 - 501	2.8e-49	DNA polymerase alpha/epsilon subunit B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22110 AT5G22110
fragaria_vesca	FvH4_5g17980
malus_domestica	MD06G1235400.v1.1 MD14G1242400.v1.1
prunus_persica	Prupe.5G240100_v2.0.a1 Prupe.8G055400_v2.0.a1 Prupe.8G055400_v2.0.a1 Prupe.8G055400_v2.0.a1 Prupe.8G055400_v2.0.a1 Prupe.8G055400_v2.0.a1 Prupe.8G055400_v2.0.a1 Prupe.8G055400_v2.0.a1
pyrus_communis	pycom06g21030 pycom14g12970 pycom14g20380
rosa_chinensis	RchiOBHm_Chr7g0177621
rosa_laevigata	RLG00000005519 RLG00000005520
rosa_multiflora	Rmu_ssc0000330.1_g000015
rosa_roxburghii	Rroxscaffold_3G00275720
rosa_rugosa	Rorug06G0407900 Rorug06G0408000
rosa_samantha	Rh7AG007200 Rh7AG007300 Rh7BG007200 Rh7BG007300 Rh7CG007700 Rh7CG007800 Rh7DG007400 Rh7DG007500
rosa_wichuraiana	Rw7G000620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	785, 890
Acc65I	GGTACC	1 cut(s)	979
AccB1I	GGYRCC	2 cut(s)	119, 979
AccB7I	CCANNNNNTGG	2 cut(s)	976, 1431
AccI	GTMKAC	2 cut(s)	60, 826
AccII	CGCG	1 cut(s)	368
AciI	CCGC	6 cut(s)	228, 344, 366, 374, 800, 1039
AclWI	GGATC	6 cut(s)	296, 331, 943, 956, 1318, 1346
AcsI	RAATTY	2 cut(s)	492, 1006
AcyI	GRCGYC	3 cut(s)	63, 120, 273
AfaI	GTAC	4 cut(s)	981, 1301, 1419, 1588
AfiI	CCNNNNNNNGG	3 cut(s)	353, 976, 1431
AflII	CTTAAG	1 cut(s)	161
AflIII	ACRYGT	2 cut(s)	780, 885
AgsI	TTSAA	4 cut(s)	1208, 1236, 1513, 1601
AjnI	CCWGG	5 cut(s)	570, 969, 1132, 1147, 1540
AleI	CACNNNNGTG	1 cut(s)	1568
AluBI	AGCT	8 cut(s)	145, 151, 477, 940, 1072, 1102, 1204, 1273
AluI	AGCT	8 cut(s)	145, 151, 477, 940, 1072, 1102, 1204, 1273
Alw26I	GTCTC	5 cut(s)	94, 504, 771, 836, 1055
AlwI	GGATC	6 cut(s)	296, 331, 943, 956, 1318, 1346
AlwNI	CAGNNNCTG	2 cut(s)	502, 1139
Ama87I	CYCGRG	1 cut(s)	137
ApeKI	GCWGC	2 cut(s)	142, 1088
ApoI	RAATTY	2 cut(s)	492, 1006
Asp700I	GAANNNNTTC	4 cut(s)	75, 317, 1203, 1508
Asp718I	GGTACC	1 cut(s)	979
AspA2I	CCTAGG	1 cut(s)	247
AspLEI	GCGC	2 cut(s)	122, 1311
AspS9I	GGNCC	4 cut(s)	190, 283, 1136, 1151
AsuHPI	GGTGA	3 cut(s)	541, 1010, 1499
AsuII	TTCGAA	1 cut(s)	1157
AvaI	CYCGRG	1 cut(s)	137
AvaII	GGWCC	4 cut(s)	190, 283, 1136, 1151
AvrII	CCTAGG	1 cut(s)	247
BaeGI	GKGCMC	1 cut(s)	1565
BamHI	GGATCC	1 cut(s)	948
BanI	GGYRCC	2 cut(s)	119, 979
BarI	GAAGNNNNNNTAC	2 cut(s)	305, 337
BbsI	GAAGAC	2 cut(s)	159, 582
BbvI	GCAGC	2 cut(s)	154, 1100
BccI	CCATC	9 cut(s)	131, 432, 519, 526, 551, 950, 1101, 1392, 1401
BceAI	ACGGC	4 cut(s)	133, 215, 1101, 1296
BciT130I	CCWGG	5 cut(s)	572, 971, 1134, 1149, 1542
BclI	TGATCA	1 cut(s)	1441
BcoDI	GTCTC	5 cut(s)	94, 504, 771, 836, 1055
BfaI	CTAG	5 cut(s)	248, 330, 941, 1047, 1073
BfmI	CTRYAG	2 cut(s)	672, 1335
BfoI	RGCGCY	1 cut(s)	123
BfrI	CTTAAG	1 cut(s)	161
BisI	GCNGC	4 cut(s)	143, 344, 375, 1089
BlnI	CCTAGG	1 cut(s)	247
BlsI	GCNGC	4 cut(s)	144, 345, 376, 1090
Bme1390I	CCNGG	5 cut(s)	572, 971, 1134, 1149, 1542
Bme18I	GGWCC	4 cut(s)	190, 283, 1136, 1151
BmeT110I	CYCGRG	1 cut(s)	137
BmgT120I	GGNCC	4 cut(s)	190, 283, 1136, 1151
BmiI	GGNNCC	5 cut(s)	121, 285, 950, 981, 1546
BmrFI	CCNGG	5 cut(s)	572, 971, 1134, 1149, 1542
BmsI	GCATC	4 cut(s)	596, 708, 1372, 1620
BoxI	GACNNNNGTC	1 cut(s)	1149
BpiI	GAAGAC	2 cut(s)	159, 582
BplI	GAGNNNNNCTC	2 cut(s)	403, 435
BpmI	CTGGAG	1 cut(s)	131
Bpu14I	TTCGAA	1 cut(s)	1157
BpuEI	CTTGAG	1 cut(s)	1537
Bsa29I	ATCGAT	1 cut(s)	126
BsaHI	GRCGYC	3 cut(s)	63, 120, 273
BsaJI	CCNNGG	3 cut(s)	247, 1132, 1147
BsaWI	WCCGGW	1 cut(s)	515
Bsc4I	CCNNNNNNNGG	3 cut(s)	353, 976, 1431
Bse1I	ACTGG	1 cut(s)	867
BseBI	CCWGG	5 cut(s)	572, 971, 1134, 1149, 1542
BseCI	ATCGAT	1 cut(s)	126
BseDI	CCNNGG	3 cut(s)	247, 1132, 1147
BseLI	CCNNNNNNNGG	3 cut(s)	353, 976, 1431
BseMII	CTCAG	3 cut(s)	862, 1066, 1604
BseNI	ACTGG	1 cut(s)	867
BseSI	GKGCMC	1 cut(s)	1565
BseXI	GCAGC	2 cut(s)	154, 1100
BsgI	GTGCAG	1 cut(s)	41
Bsh1236I	CGCG	1 cut(s)	368
BshNI	GGYRCC	2 cut(s)	119, 979
BshVI	ATCGAT	1 cut(s)	126
BsiHKCI	CYCGRG	1 cut(s)	137
BsiSI	CCGG	1 cut(s)	516
BslFI	GGGAC	2 cut(s)	269, 816
BslI	CCNNNNNNNGG	3 cut(s)	353, 976, 1431
BsmAI	GTCTC	5 cut(s)	94, 504, 771, 836, 1055
BsmBI	CGTCTC	1 cut(s)	94
BsmFI	GGGAC	2 cut(s)	269, 816
BsmI	GAATGC	1 cut(s)	1311
BsoBI	CYCGRG	1 cut(s)	137
Bsp119I	TTCGAA	1 cut(s)	1157
Bsp1286I	GDGCHC	1 cut(s)	1565
Bsp1407I	TGTACA	2 cut(s)	1299, 1417
Bsp143I	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
BspACI	CCGC	6 cut(s)	228, 344, 366, 374, 800, 1039
BspCNI	CTCAG	3 cut(s)	861, 1065, 1603
BspDI	ATCGAT	1 cut(s)	126
BspFNI	CGCG	1 cut(s)	368
BspLI	GGNNCC	5 cut(s)	121, 285, 950, 981, 1546
BspPI	GGATC	6 cut(s)	296, 331, 943, 956, 1318, 1346
BspQI	GCTCTTC	1 cut(s)	1194
BspT104I	TTCGAA	1 cut(s)	1157
BspT107I	GGYRCC	2 cut(s)	119, 979
BspTI	CTTAAG	1 cut(s)	161
BsrGI	TGTACA	2 cut(s)	1299, 1417
BsrI	ACTGG	1 cut(s)	867
BssECI	CCNNGG	3 cut(s)	247, 1132, 1147
BssMI	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
BssNAI	GTATAC	1 cut(s)	827
BssNI	GRCGYC	3 cut(s)	63, 120, 273
BssT1I	CCWWGG	1 cut(s)	247
Bst1107I	GTATAC	1 cut(s)	827
Bst2UI	CCWGG	5 cut(s)	572, 971, 1134, 1149, 1542
Bst4CI	ACNGT	4 cut(s)	190, 549, 920, 1299
Bst6I	CTCTTC	5 cut(s)	66, 639, 834, 918, 1194
BstACI	GRCGYC	3 cut(s)	63, 120, 273
BstAFI	CTTAAG	1 cut(s)	161
BstAUI	TGTACA	2 cut(s)	1299, 1417
BstBI	TTCGAA	1 cut(s)	1157
BstC8I	GCNNGC	2 cut(s)	798, 1070
BstDEI	CTNAG	4 cut(s)	848, 1052, 1590, 1612
BstFNI	CGCG	1 cut(s)	368
BstH2I	RGCGCY	1 cut(s)	123
BstHHI	GCGC	2 cut(s)	122, 1311
BstKTI	GATC	8 cut(s)	304, 309, 339, 405, 951, 1326, 1354, 1444
BstMAI	GTCTC	5 cut(s)	94, 504, 771, 836, 1055
BstMBI	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
BstMWI	GCNNNNNNNGC	8 cut(s)	148, 204, 227, 374, 443, 1108, 1317, 1398
BstNI	CCWGG	5 cut(s)	572, 971, 1134, 1149, 1542
BstNSI	RCATGY	2 cut(s)	784, 889
BstPAI	GACNNNNGTC	1 cut(s)	1149
BstSCI	CCNGG	5 cut(s)	570, 969, 1132, 1147, 1540
BstSFI	CTRYAG	2 cut(s)	672, 1335
BstSLI	GKGCMC	1 cut(s)	1565
BstUI	CGCG	1 cut(s)	368
BstV1I	GCAGC	2 cut(s)	154, 1100
BstV2I	GAAGAC	2 cut(s)	159, 582
BstX2I	RGATCY	2 cut(s)	336, 948
BstYI	RGATCY	2 cut(s)	336, 948
BstZ17I	GTATAC	1 cut(s)	827
Bsu15I	ATCGAT	1 cut(s)	126
BsuTUI	ATCGAT	1 cut(s)	126
BtsIMutI	CAGTG	1 cut(s)	925
Cac8I	GCNNGC	2 cut(s)	798, 1070
CaiI	CAGNNNCTG	2 cut(s)	502, 1139
CfoI	GCGC	2 cut(s)	122, 1311
Cfr13I	GGNCC	4 cut(s)	190, 283, 1136, 1151
ClaI	ATCGAT	1 cut(s)	126
CseI	GACGC	4 cut(s)	71, 187, 281, 351
Csp6I	GTAC	4 cut(s)	980, 1300, 1418, 1587
CviAII	CATG	5 cut(s)	353, 781, 806, 886, 1228
CviQI	GTAC	4 cut(s)	980, 1300, 1418, 1587
DdeI	CTNAG	4 cut(s)	848, 1052, 1590, 1612
DinI	GGCGCC	1 cut(s)	121
DpnI	GATC	8 cut(s)	303, 308, 338, 404, 950, 1325, 1353, 1443
DpnII	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
DrdI	GACNNNNNNGTC	2 cut(s)	785, 890
DseDI	GACNNNNNNGTC	2 cut(s)	785, 890
Eam1104I	CTCTTC	5 cut(s)	66, 639, 834, 918, 1194
EarI	CTCTTC	5 cut(s)	66, 639, 834, 918, 1194
EciI	GGCGGA	1 cut(s)	1028
Eco130I	CCWWGG	1 cut(s)	247
Eco32I	GATATC	2 cut(s)	486, 543
Eco47I	GGWCC	4 cut(s)	190, 283, 1136, 1151
Eco88I	CYCGRG	1 cut(s)	137
EcoO109I	RGGNCCY	2 cut(s)	1136, 1151
EcoRII	CCWGG	5 cut(s)	570, 969, 1132, 1147, 1540
EcoRV	GATATC	2 cut(s)	486, 543
EcoT14I	CCWWGG	1 cut(s)	247
EgeI	GGCGCC	1 cut(s)	121
EheI	GGCGCC	1 cut(s)	121
ErhI	CCWWGG	1 cut(s)	247
Esp3I	CGTCTC	1 cut(s)	94
FaeI	CATG	5 cut(s)	356, 784, 809, 889, 1231
FalI	AAGNNNNNCTT	2 cut(s)	1228, 1260
FaqI	GGGAC	2 cut(s)	269, 816
FatI	CATG	5 cut(s)	352, 780, 805, 885, 1227
FauI	CCCGC	1 cut(s)	793
FbaI	TGATCA	1 cut(s)	1441
FblI	GTMKAC	2 cut(s)	60, 826
Fnu4HI	GCNGC	4 cut(s)	143, 344, 375, 1089
Fsp4HI	GCNGC	4 cut(s)	143, 344, 375, 1089
FspBI	CTAG	5 cut(s)	248, 330, 941, 1047, 1073
GlaI	GCGC	2 cut(s)	121, 1310
GluI	GCNGC	4 cut(s)	143, 344, 375, 1089
GsuI	CTGGAG	1 cut(s)	131
HaeII	RGCGCY	1 cut(s)	123
HapII	CCGG	1 cut(s)	516
HgaI	GACGC	4 cut(s)	71, 187, 281, 351
HhaI	GCGC	2 cut(s)	122, 1311
Hin1I	GRCGYC	3 cut(s)	63, 120, 273
Hin1II	CATG	5 cut(s)	356, 784, 809, 889, 1231
Hin6I	GCGC	2 cut(s)	120, 1309
HinP1I	GCGC	2 cut(s)	120, 1309
HincII	GTYRAC	1 cut(s)	61
HindII	GTYRAC	1 cut(s)	61
HpaII	CCGG	1 cut(s)	516
HphI	GGTGA	3 cut(s)	541, 1010, 1499
Hpy166II	GTNNAC	2 cut(s)	61, 827
Hpy188III	TCNNGA	9 cut(s)	93, 193, 310, 400, 1139, 1289, 1432, 1554, 1592
Hpy8I	GTNNAC	2 cut(s)	61, 827
Hpy99I	CGWCG	7 cut(s)	10, 65, 104, 119, 203, 242, 275
HpyCH4III	ACNGT	4 cut(s)	190, 549, 920, 1299
HpyCH4V	TGCA	9 cut(s)	22, 33, 587, 614, 1026, 1060, 1088, 1248, 1633
HpyF10VI	GCNNNNNNNGC	8 cut(s)	148, 204, 227, 374, 443, 1108, 1317, 1398
HpyF3I	CTNAG	4 cut(s)	848, 1052, 1590, 1612
Hsp92I	GRCGYC	3 cut(s)	63, 120, 273
Hsp92II	CATG	5 cut(s)	356, 784, 809, 889, 1231
HspAI	GCGC	2 cut(s)	120, 1309
KasI	GGCGCC	1 cut(s)	119
KpnI	GGTACC	1 cut(s)	983
Ksp22I	TGATCA	1 cut(s)	1441
Kzo9I	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
LguI	GCTCTTC	1 cut(s)	1194
LmnI	GCTCC	2 cut(s)	150, 156
Lsp1109I	GCAGC	2 cut(s)	154, 1100
LweI	GCATC	4 cut(s)	596, 708, 1372, 1620
MaeI	CTAG	5 cut(s)	248, 330, 941, 1047, 1073
MaeIII	GTNAC	2 cut(s)	959, 1487
MalI	GATC	8 cut(s)	303, 308, 338, 404, 950, 1325, 1353, 1443
MboI	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
MflI	RGATCY	2 cut(s)	336, 948
MhlI	GDGCHC	1 cut(s)	1565
MluCI	AATT	6 cut(s)	492, 642, 791, 1006, 1435, 1601
Mly113I	GGCGCC	1 cut(s)	120
MlyI	GAGTC	1 cut(s)	623
MmeI	TCCRAC	5 cut(s)	132, 178, 487, 531, 1487
MroXI	GAANNNNTTC	4 cut(s)	75, 317, 1203, 1508
MseI	TTAA	4 cut(s)	54, 162, 879, 1536
MslI	CAYNNNNRTG	2 cut(s)	357, 1568
MspCI	CTTAAG	1 cut(s)	161
MspI	CCGG	1 cut(s)	516
MspR9I	CCNGG	5 cut(s)	572, 971, 1134, 1149, 1542
Mva1269I	GAATGC	1 cut(s)	1311
MvaI	CCWGG	5 cut(s)	572, 971, 1134, 1149, 1542
MvnI	CGCG	1 cut(s)	368
MwoI	GCNNNNNNNGC	8 cut(s)	148, 204, 227, 374, 443, 1108, 1317, 1398
NarI	GGCGCC	1 cut(s)	120
NdeII	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
NlaIII	CATG	5 cut(s)	356, 784, 809, 889, 1231
NlaIV	GGNNCC	5 cut(s)	121, 285, 950, 981, 1546
NmuCI	GTSAC	1 cut(s)	1487
NspI	RCATGY	2 cut(s)	784, 889
NspV	TTCGAA	1 cut(s)	1157
OliI	CACNNNNGTG	1 cut(s)	1568
PaeR7I	CTCGAG	1 cut(s)	137
PciI	ACATGT	2 cut(s)	780, 885
PciSI	GCTCTTC	1 cut(s)	1194
PcsI	WCGNNNNNNNCGW	4 cut(s)	66, 105, 123, 711
PctI	GAATGC	1 cut(s)	1311
PdmI	GAANNNNTTC	4 cut(s)	75, 317, 1203, 1508
PfeI	GAWTC	9 cut(s)	76, 96, 104, 349, 452, 678, 1524, 1619, 1625
PflMI	CCANNNNNTGG	2 cut(s)	976, 1431
PkrI	GCNGC	4 cut(s)	144, 345, 376, 1090
PleI	GAGTC	1 cut(s)	623
PluTI	GGCGCC	1 cut(s)	123
PpsI	GAGTC	1 cut(s)	623
PpuMI	RGGWCCY	2 cut(s)	1136, 1151
PscI	ACATGT	2 cut(s)	780, 885
PshAI	GACNNNNGTC	1 cut(s)	1149
Psp5II	RGGWCCY	2 cut(s)	1136, 1151
Psp6I	CCWGG	5 cut(s)	570, 969, 1132, 1147, 1540
PspGI	CCWGG	5 cut(s)	570, 969, 1132, 1147, 1540
PspN4I	GGNNCC	5 cut(s)	121, 285, 950, 981, 1546
PspPI	GGNCC	4 cut(s)	190, 283, 1136, 1151
PspPPI	RGGWCCY	2 cut(s)	1136, 1151
PspXI	VCTCGAGB	1 cut(s)	137
PstNI	CAGNNNCTG	2 cut(s)	502, 1139
PsuI	RGATCY	2 cut(s)	336, 948
RsaI	GTAC	4 cut(s)	981, 1301, 1419, 1588
RsaNI	GTAC	4 cut(s)	980, 1300, 1418, 1587
RseI	CAYNNNNRTG	2 cut(s)	357, 1568
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	1194
SaqAI	TTAA	4 cut(s)	54, 162, 879, 1536
SatI	GCNGC	4 cut(s)	143, 344, 375, 1089
Sau3AI	GATC	8 cut(s)	301, 306, 336, 402, 948, 1323, 1351, 1441
Sau96I	GGNCC	4 cut(s)	190, 283, 1136, 1151
SchI	GAGTC	1 cut(s)	623
ScrFI	CCNGG	5 cut(s)	572, 971, 1134, 1149, 1542
SduI	GDGCHC	1 cut(s)	1565
SfaNI	GCATC	4 cut(s)	596, 708, 1372, 1620
SfcI	CTRYAG	2 cut(s)	672, 1335
SfoI	GGCGCC	1 cut(s)	121
Sfr274I	CTCGAG	1 cut(s)	137
SfuI	TTCGAA	1 cut(s)	1157
SinI	GGWCC	4 cut(s)	190, 283, 1136, 1151
SlaI	CTCGAG	1 cut(s)	137
SmiMI	CAYNNNNRTG	2 cut(s)	357, 1568
SmlI	CTYRAG	3 cut(s)	137, 161, 1552
SmoI	CTYRAG	3 cut(s)	137, 161, 1552
Sse9I	AATT	6 cut(s)	492, 642, 791, 1006, 1435, 1601
SsiI	CCGC	6 cut(s)	228, 344, 366, 374, 800, 1039
SspDI	GGCGCC	1 cut(s)	119
SspMI	CTAG	5 cut(s)	248, 330, 941, 1047, 1073
StyD4I	CCNGG	5 cut(s)	570, 969, 1132, 1147, 1540
StyI	CCWWGG	1 cut(s)	247
TaaI	ACNGT	4 cut(s)	190, 549, 920, 1299
TaqI	TCGA	8 cut(s)	60, 69, 99, 126, 138, 177, 1157, 1628
TasI	AATT	6 cut(s)	492, 642, 791, 1006, 1435, 1601
TatI	WGTACW	3 cut(s)	1299, 1417, 1586
TauI	GCSGC	2 cut(s)	346, 377
TfiI	GAWTC	9 cut(s)	76, 96, 104, 349, 452, 678, 1524, 1619, 1625
Tru1I	TTAA	4 cut(s)	54, 162, 879, 1536
Tru9I	TTAA	4 cut(s)	54, 162, 879, 1536
TscAI	CASTG	1 cut(s)	925
TseFI	GTSAC	1 cut(s)	1487
TseI	GCWGC	2 cut(s)	142, 1088
Tsp45I	GTSAC	1 cut(s)	1487
TspDTI	ATGAA	1 cut(s)	341
TspRI	CASTG	1 cut(s)	925
Van91I	CCANNNNNTGG	2 cut(s)	976, 1431
Vha464I	CTTAAG	1 cut(s)	161
VpaK11BI	GGWCC	4 cut(s)	190, 283, 1136, 1151
XapI	RAATTY	2 cut(s)	492, 1006
XceI	RCATGY	2 cut(s)	784, 889
XhoI	CTCGAG	1 cut(s)	137
XmaJI	CCTAGG	1 cut(s)	247
XmiI	GTMKAC	2 cut(s)	60, 826
XmnI	GAANNNNTTC	4 cut(s)	75, 317, 1203, 1508
XspI	CTAG	5 cut(s)	248, 330, 941, 1047, 1073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.