Rw7G004100

Plant calmodulin-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0012620
Physical Location & Seq
Forward (+)
3426923 .. 3431404
4482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G004100.1

Sequence Viewer

Length: 3072 bp
ATGGAAGTGGAGAATATCGGTATCCCAGTGATCCTACAAGACTTGAAGTTTATTTGTGACGATGGCAGAAGGAACTCTGTCTCAGTGATTCCACAAGAAAAAGAACCCAATGGCAGTCACATTAGAAGGCATTCTATAGCACTGGTTCCACAGGAAATGGAGTCCAAGCGTGGTGTCATTAGCAACTCTATCCCTGTGATCCAACAGGAAATTGAGCCAAATGGTGATGAAATCGGGAGGAACTCTATTCCAGTGATCCCACAGGAAATTGAGTCGGATGGTGATGATTTCAGAAGGGCCTTCATTTTCCCACAGAAGGTGGAGTCTAATGCTGATGAGTCCGATGATCTTAGCACTAACTCAATCCCAGTGATCCCACAGGAGGTGGAGTCTAATGCTGATGAGTCCGATGATGTTAGCACTAACTCAATCCCAGTGATCCCACAGAAGGTGGAGTCTAATGTTGATGAGTCCAATGATGTTAGCAAAAACTCAATCCCAGTGACCCCACAGGAGGTGGAGTCTAATGTTGATGAGTCCAATGATGTTAGCAAAAACTCAATCCCAGTGATCCCACAGGAGGTGGAGGCTAATGTTGATGAGTCCAATGAATTTAGCACAAACTCAATCCCAGTGATCCCACAGGAAATGGAGCTTGAAGGTAATGATATAGGAAGGAACTCTATCCCCGTGACTCCGCAGGAAATAGAGCTTGATGGTGATGATATCAGAAGGAGCTCTATTGGGGAAGTAGATCCTGCTGATATACAAACTAACTCTACAGTAATCCTACAGAAAATTGAGTCCAATGGTGGTGATGTGAGAAGGAATTCCATTGCAGGTATCCCAGAGGAAATAGAGTCCGAGGATGGTGACATCAGAAGGAACTCTATCATAGTGATCCCGGTGGGAATAGAGGCCAATGGGGCTGATGTCAGAAGGAGGTCTATTGCTAGAAATATCCAATCCCGTTATCTCAGAGCTTCAATGGGATCTTGCCATGATTATTGCAAATATGGAATGAGGGAAGGATGTGAAGATGAGAATTTGGAAATATCTCCTATAGCTGGGAGGAAAAGGATATCCACAATCAACTCTAAGCCTTCTCCAGATTCTTTTGTCACAAAGAAAAGGGTCATATCAGTGACGAAGAAAGGAACTCCTTCCCCTAAAAAAGTTTCTAAGGAAGTTGGTGTTCCTAAGGAAAAGTCCATTCATTTGAGGAAAAAGGGTGGGCAATTTGAGCCATCTTCTGAGGTGAAATCCCCAGTCAGTCATGAGCCTTCTCCGGATTCAGAAGCCCACATACTTAACAAGTCTTTTGTCACAGAGAAAAGGGTTGTGTCAGTGACAAAGAAAGGAACTGTTTCTTTGGAAAAAGAGATTGATGTTACTATGGAAGATTCCATGGATTTGGGGGAGGAACCTGAGCAATTAGAATCATCTTCTCTCCCAGGATCAGTCCGAAGCCTGAGAAATTCGAAAGTGATATCCACAATCAGTCCTAGGCCTTATCCAGGTTCTGCTGCTATGGAGAAGAAAGTTATATCAGTGAAAAAGAAAGATACTGCTTCTTCAAAAAATGAAATGCCTTCCTTAAAGGAAATTGATGTTTCTATGGAAGAGCAAGGTTTACGTCATAAAAGAAACATTGGAACCAGAAATAGCAAGGAAGCACCAGACGGTTCAAGCAGTGGAGGAAATAGAAGTATCAGAAACCATAATAGGAGGGCTTCTCTACCGGGTGAGAAACAGGCAATGGGGCTGCAACATGTTTCTTTGTCTTCCAAACACTTCAATAAGAGAGACTCCAATGTGAATACCGGAAGCTCTTATAACTTCAAGGGGTTGACTCATCTGAAAGATCAAAATGATCCCGGAAAAGTTGAACCTCAGCCTCCAAGTGATAAAGAAACGCCAGAAAAGATTTTGTATGTCATTGAATCAAGTACTGAGAATGGTACTATGGAATCAACTCCAAATGGTGTTAGTGTTCCTGAGCCATCACCATCCTCAGCTGTATCTGTTGAAGGCAAAGGCAAAAGCTTGAAGCATGCAAGGAAGGGAACTGGTAGAACTGGATCCTCTCCATCCTCTGAGAAGAAAAACTTGAAATGTGTTAATGGAGCTGATTCTCGATTAGCTGGTCCTTTAGATCAGGATAACAAGGGGTTGAGAAGAACTCGACGTGGTATTCCAGCATCTTTATCTCCATCGTCATCCTTATCATCCATGTCCATATATTCATCTGACTCCACTCAACGTAAAGAAAATGGTGCCAACTCTCAGCATGATAGAAGTAAAAATGTGAAGCCAATAGGAAAGTCGAAGGTGCAGCACAAGACTACTCCTCGGAGGGCTGCAATTGTTGGCTCTGGAAACAAAAACAGTGTATCCCTGAAGCTGACATTTCAGAGAGGTAGGGTGATTGAACTTCAGCCTGAGAACAATACTCCAAGGAGACTCAAATTCAGGCGAGTAAGATCGGCAATGGAGGTTCCAAACAGTAAAGGCAGTATCACAAGTGGAAGAATTGGGAGGAAGGAAGTTGATGACAGCCAGTCAACTGGTGCTGGTATCATCAAAAAGGGAAGCAATGTGAGGAAGGAAGTTGGTAACAGACAGTCAAGTGGTGCTGGTATCAAAACGGTAAGCATTGTGAGGAAGGAAGTTGGTGATACCCAGTCAAGTGGTGTTGCTATCAAAAGGGGAATCATTGGGAGGAAGGAAGTTTATGACAATCAGACAAATGGTGCTAAACTCAAATCCGAGAAAGTTGTTCTGAGAAACCAAGAACAAGTTGAAGTTTCCTCAAGGAAGAGCTTAACGAGGAAGGGGGTTGCTGTTGGTCTTTTGAATGGCATCAGAAGCAATCCTGAGAAAGTGGTTTTGAGACACCAAGATGTAAAAGGAAAGAAAGGTGATCAGAAATTGTTCAACAATGTGATTGAAGAGACGGCCAGCAAGCTTGTCGAAACTAGGAAGAGTAAAGTCAAGGCCTTGGTTGGTGCTTTTGAGACTGTGATCTCTCTTCAGGACACCAGACCAGCGGCAGCGGCAGATGCATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CaM_binding

Protein Analysis

1023

Amino Acids

111.39

Weight (kDa)

9.06

Isoelectric Point (pI)

59.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CaM_binding PF07839 914 - 1010 6.9e-26 Plant calmodulin-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1836
Acc36I ACCTGC 1 cut(s) 830
AccB1I GGYRCC 1 cut(s) 2276
AccIII TCCGGA 1 cut(s) 1288
AciI CCGC 3 cut(s) 698, 3050, 3056
AcoI YGGCCR 1 cut(s) 2958
AcsI RAATTY 5 cut(s) 611, 829, 1045, 1477, 2468
AcuI CTGAAG 3 cut(s) 2420, 2420, 3017
AfaI GTAC 2 cut(s) 1951, 1963
AfiI CCNNNNNNNGG 7 cut(s) 316, 382, 448, 514, 580, 1067, 1517
AflIII ACRYGT 1 cut(s) 1771
AhdI GACNNNNNGTC 1 cut(s) 2560
AjiI CACGTC 1 cut(s) 2189
AjnI CCWGG 2 cut(s) 1453, 1516
Alw21I GWGCWC 1 cut(s) 740
Alw26I GTCTC 6 cut(s) 85, 1800, 2455, 2887, 2948, 3011
AlwNI CAGNNNCTG 1 cut(s) 1523
Aor13HI TCCGGA 1 cut(s) 1288
AoxI GGCC 5 cut(s) 297, 918, 1508, 2958, 2997
ApeKI GCWGC 5 cut(s) 1526, 1765, 2335, 2360, 3053
ApoI RAATTY 5 cut(s) 611, 829, 1045, 1477, 2468
Asp700I GAANNNNTTC 5 cut(s) 130, 829, 1162, 1366, 2933
AspA2I CCTAGG 1 cut(s) 1505
AspS9I GGNCC 2 cut(s) 297, 2147
AsuC2I CCSGG 3 cut(s) 905, 1743, 1878
AsuII TTCGAA 1 cut(s) 1481
AvaII GGWCC 1 cut(s) 2147
AvrII CCTAGG 1 cut(s) 1505
AxyI CCTNAGG 1 cut(s) 1200
BamHI GGATCC 1 cut(s) 2081
BanI GGYRCC 1 cut(s) 2276
BanII GRGCYC 1 cut(s) 740
BarI GAAGNNNNNNTAC 2 cut(s) 1290, 1322
BbsI GAAGAC 1 cut(s) 1776
Bbv12I GWGCWC 1 cut(s) 740
BbvCI CCTCAGC 2 cut(s) 1893, 2014
BbvI GCAGC 5 cut(s) 1513, 1752, 2347, 2347, 3065
BccI CCATC 9 cut(s) 56, 272, 710, 863, 1255, 2011, 2017, 2098, 2221
BceAI ACGGC 1 cut(s) 2973
BcgI CGANNNNNNTGC 2 cut(s) 2953, 2987
BciT130I CCWGG 2 cut(s) 1455, 1518
BciVI GTATCC 3 cut(s) 32, 854, 2404
BclI TGATCA 1 cut(s) 2923
BcnI CCSGG 3 cut(s) 905, 1743, 1878
BcoDI GTCTC 6 cut(s) 85, 1800, 2455, 2887, 2948, 3011
BfaI CTAG 3 cut(s) 954, 1506, 2979
BfmI CTRYAG 4 cut(s) 135, 780, 791, 1062
BfuAI ACCTGC 1 cut(s) 830
BfuI GTATCC 3 cut(s) 32, 854, 2404
BglI GCCNNNNNGGC 1 cut(s) 926
BisI GCNGC 7 cut(s) 1527, 1766, 2336, 2361, 3051, 3054, 3057
BlnI CCTAGG 1 cut(s) 1505
BlsI GCNGC 7 cut(s) 1528, 1767, 2337, 2362, 3052, 3055, 3058
BmcAI AGTACT 1 cut(s) 1951
Bme1390I CCNGG 5 cut(s) 905, 1455, 1518, 1743, 1878
Bme18I GGWCC 1 cut(s) 2147
BmeRI GACNNNNNGTC 1 cut(s) 2560
BmgBI CACGTC 1 cut(s) 2189
BmgT120I GGNCC 2 cut(s) 297, 2147
BmiI GGNNCC 6 cut(s) 147, 1425, 1657, 2083, 2278, 2499
BmrFI CCNGG 5 cut(s) 905, 1455, 1518, 1743, 1878
BmrI ACTGGG 8 cut(s) 20, 362, 428, 494, 560, 626, 1262, 2677
BmsI GCATC 3 cut(s) 2210, 2871, 3052
BmuI ACTGGG 8 cut(s) 20, 362, 428, 494, 560, 626, 1262, 2677
BpiI GAAGAC 1 cut(s) 1776
BplI GAGNNNNNCTC 4 cut(s) 1720, 1752, 2167, 2199
BpmI CTGGAG 1 cut(s) 1092
Bpu10I CCTNAGC 4 cut(s) 1428, 1893, 1998, 2014
Bpu14I TTCGAA 1 cut(s) 1481
BpuEI CTTGAG 1 cut(s) 2797
BpuMI CCSGG 3 cut(s) 905, 1743, 1878
BsaJI CCNNGG 7 cut(s) 864, 1407, 1453, 1505, 2351, 2456, 3000
BsaWI WCCGGW 2 cut(s) 1288, 1823
BsaXI ACNNNNNCTCC 4 cut(s) 374, 404, 506, 536
Bsc4I CCNNNNNNNGG 7 cut(s) 316, 382, 448, 514, 580, 1067, 1517
Bse21I CCTNAGG 1 cut(s) 1200
Bse3DI GCAATG 4 cut(s) 834, 1764, 2496, 2602
BseAI TCCGGA 1 cut(s) 1288
BseBI CCWGG 2 cut(s) 1455, 1518
BseDI CCNNGG 7 cut(s) 864, 1407, 1453, 1505, 2351, 2456, 3000
BseGI GGATG 7 cut(s) 283, 874, 1037, 2009, 2090, 2219, 2228
BseLI CCNNNNNNNGG 7 cut(s) 316, 382, 448, 514, 580, 1067, 1517
BseMI GCAATG 4 cut(s) 834, 1764, 2496, 2602
BseRI GAGGAG 1 cut(s) 2340
BseXI GCAGC 5 cut(s) 1513, 1752, 2347, 2347, 3065
BseYI CCCAGC 1 cut(s) 1067
BsgI GTGCAG 1 cut(s) 2354
BshFI GGCC 5 cut(s) 299, 920, 1510, 2960, 2999
BshNI GGYRCC 1 cut(s) 2276
BsiHKAI GWGCWC 1 cut(s) 740
BsiSI CCGG 5 cut(s) 905, 1289, 1742, 1824, 1878
BslI CCNNNNNNNGG 7 cut(s) 316, 382, 448, 514, 580, 1067, 1517
BsmAI GTCTC 6 cut(s) 85, 1800, 2455, 2887, 2948, 3011
BsmBI CGTCTC 1 cut(s) 2948
BsmI GAATGC 1 cut(s) 130
BsnI GGCC 5 cut(s) 299, 920, 1510, 2960, 2999
Bsp119I TTCGAA 1 cut(s) 1481
Bsp1286I GDGCHC 1 cut(s) 740
Bsp13I TCCGGA 1 cut(s) 1288
Bsp19I CCATGG 1 cut(s) 1407
BspACI CCGC 3 cut(s) 698, 3050, 3056
BspANI GGCC 5 cut(s) 299, 920, 1510, 2960, 2999
BspEI TCCGGA 1 cut(s) 1288
BspHI TCATGA 1 cut(s) 1276
BspLI GGNNCC 6 cut(s) 147, 1425, 1657, 2083, 2278, 2499
BspMI ACCTGC 1 cut(s) 830
BspQI GCTCTTC 2 cut(s) 1617, 2813
BspT104I TTCGAA 1 cut(s) 1481
BspT107I GGYRCC 1 cut(s) 2276
BsrDI GCAATG 4 cut(s) 834, 1764, 2496, 2602
BssECI CCNNGG 7 cut(s) 864, 1407, 1453, 1505, 2351, 2456, 3000
BssT1I CCWWGG 4 cut(s) 1407, 1505, 2456, 3000
Bst2UI CCWGG 2 cut(s) 1455, 1518
Bst4CI ACNGT 8 cut(s) 784, 1366, 1685, 2390, 2507, 2625, 2650, 3022
Bst6I CTCTTC 5 cut(s) 1617, 2813, 2946, 2978, 3036
BstBI TTCGAA 1 cut(s) 1481
BstC8I GCNNGC 3 cut(s) 2055, 2962, 2966
BstDSI CCRYGG 1 cut(s) 1407
BstENI CCTNNNNNAGG 1 cut(s) 1515
BstF5I GGATG 7 cut(s) 283, 874, 1037, 2009, 2090, 2219, 2228
BstMAI GTCTC 6 cut(s) 85, 1800, 2455, 2887, 2948, 3011
BstMWI GCNNNNNNNGC 5 cut(s) 926, 1243, 2868, 3056, 3062
BstNI CCWGG 2 cut(s) 1455, 1518
BstNSI RCATGY 3 cut(s) 1775, 2057, 3069
BstSCI CCNGG 5 cut(s) 903, 1453, 1516, 1741, 1876
BstSFI CTRYAG 4 cut(s) 135, 780, 791, 1062
BstV1I GCAGC 5 cut(s) 1513, 1752, 2347, 2347, 3065
BstV2I GAAGAC 1 cut(s) 1776
BstX2I RGATCY 3 cut(s) 754, 992, 2081
BstXI CCANNNNNNTGG 3 cut(s) 1414, 2567, 2690
BstYI RGATCY 3 cut(s) 754, 992, 2081
Bsu36I CCTNAGG 1 cut(s) 1200
BsuI GTATCC 3 cut(s) 32, 854, 2404
BsuRI GGCC 5 cut(s) 299, 920, 1510, 2960, 2999
BtgI CCRYGG 1 cut(s) 1407
BtrI CACGTC 1 cut(s) 2189
BtsCI GGATG 7 cut(s) 283, 874, 1037, 2009, 2090, 2219, 2228
BtsI GCAGTG 1 cut(s) 1699
BveI ACCTGC 1 cut(s) 830
Cac8I GCNNGC 3 cut(s) 2055, 2962, 2966
CaiI CAGNNNCTG 1 cut(s) 1523
CciI TCATGA 1 cut(s) 1276
Cfr13I GGNCC 2 cut(s) 297, 2147
Csp6I GTAC 2 cut(s) 1950, 1962
CviAII CATG 8 cut(s) 1001, 1277, 1408, 1772, 2054, 2233, 2291, 3066
CviQI GTAC 2 cut(s) 1950, 1962
DriI GACNNNNNGTC 1 cut(s) 2560
EaeI YGGCCR 1 cut(s) 2958
Eam1104I CTCTTC 5 cut(s) 1617, 2813, 2946, 2978, 3036
Eam1105I GACNNNNNGTC 1 cut(s) 2560
EarI CTCTTC 5 cut(s) 1617, 2813, 2946, 2978, 3036
Ecl136II GAGCTC 1 cut(s) 738
Eco130I CCWWGG 4 cut(s) 1407, 1505, 2456, 3000
Eco147I AGGCCT 2 cut(s) 1510, 2999
Eco24I GRGCYC 1 cut(s) 740
Eco32I GATATC 3 cut(s) 727, 1083, 1491
Eco47I GGWCC 1 cut(s) 2147
Eco53kI GAGCTC 1 cut(s) 738
Eco57I CTGAAG 3 cut(s) 2420, 2420, 3017
Eco81I CCTNAGG 1 cut(s) 1200
EcoICRI GAGCTC 1 cut(s) 738
EcoNI CCTNNNNNAGG 1 cut(s) 1515
EcoO109I RGGNCCY 1 cut(s) 297
EcoRI GAATTC 1 cut(s) 829
EcoRII CCWGG 2 cut(s) 1453, 1516
EcoRV GATATC 3 cut(s) 727, 1083, 1491
EcoT14I CCWWGG 4 cut(s) 1407, 1505, 2456, 3000
EcoT22I ATGCAT 1 cut(s) 3067
EcoT38I GRGCYC 1 cut(s) 740
ErhI CCWWGG 4 cut(s) 1407, 1505, 2456, 3000
Esp3I CGTCTC 1 cut(s) 2948
FaeI CATG 8 cut(s) 1004, 1280, 1411, 1775, 2057, 2236, 2294, 3069
FalI AAGNNNNNCTT 2 cut(s) 2093, 2125
FatI CATG 8 cut(s) 1000, 1276, 1407, 1771, 2053, 2232, 2290, 3065
FbaI TGATCA 1 cut(s) 2923
Fnu4HI GCNGC 7 cut(s) 1527, 1766, 2336, 2361, 3051, 3054, 3057
FokI GGATG 7 cut(s) 290, 881, 1044, 1996, 2077, 2206, 2215
FriOI GRGCYC 1 cut(s) 740
Fsp4HI GCNGC 7 cut(s) 1527, 1766, 2336, 2361, 3051, 3054, 3057
FspBI CTAG 3 cut(s) 954, 1506, 2979
GluI GCNGC 7 cut(s) 1527, 1766, 2336, 2361, 3051, 3054, 3057
GsaI CCCAGC 1 cut(s) 1071
GsuI CTGGAG 1 cut(s) 1092
HaeIII GGCC 5 cut(s) 299, 920, 1510, 2960, 2999
HapII CCGG 5 cut(s) 905, 1289, 1742, 1824, 1878
Hin1II CATG 8 cut(s) 1004, 1280, 1411, 1775, 2057, 2236, 2294, 3069
HincII GTYRAC 2 cut(s) 1851, 2565
HindII GTYRAC 2 cut(s) 1851, 2565
HindIII AAGCTT 2 cut(s) 2044, 2966
HpaII CCGG 5 cut(s) 905, 1289, 1742, 1824, 1878
Hpy166II GTNNAC 3 cut(s) 1634, 1851, 2565
Hpy8I GTNNAC 3 cut(s) 1634, 1851, 2565
Hpy99I CGWCG 1 cut(s) 2190
HpyCH4III ACNGT 8 cut(s) 784, 1366, 1685, 2390, 2507, 2625, 2650, 3022
HpyCH4IV ACGT 3 cut(s) 1636, 2188, 2263
HpyCH4V TGCA 7 cut(s) 839, 1011, 1768, 2057, 2335, 2363, 3065
HpyF10VI GCNNNNNNNGC 5 cut(s) 926, 1243, 2868, 3056, 3062
HpySE526I ACGT 3 cut(s) 1636, 2188, 2263
Hsp92II CATG 8 cut(s) 1004, 1280, 1411, 1775, 2057, 2236, 2294, 3069
Kpn2I TCCGGA 1 cut(s) 1288
Ksp22I TGATCA 1 cut(s) 2923
LguI GCTCTTC 2 cut(s) 1617, 2813
LmnI GCTCC 3 cut(s) 652, 735, 2126
Lsp1109I GCAGC 5 cut(s) 1513, 1752, 2347, 2347, 3065
LweI GCATC 3 cut(s) 2210, 2871, 3052
MaeI CTAG 3 cut(s) 954, 1506, 2979
MaeII ACGT 3 cut(s) 1636, 2188, 2263
MfeI CAATTG 1 cut(s) 2364
MflI RGATCY 3 cut(s) 754, 992, 2081
MhlI GDGCHC 1 cut(s) 740
MmeI TCCRAC 2 cut(s) 226, 255
Mph1103I ATGCAT 1 cut(s) 3067
MroI TCCGGA 1 cut(s) 1288
MroXI GAANNNNTTC 5 cut(s) 130, 829, 1162, 1366, 2933
MseI TTAA 4 cut(s) 1311, 1598, 2121, 2825
MslI CAYNNNNRTG 2 cut(s) 1142, 2901
MspA1I CMGCKG 3 cut(s) 2018, 3050, 3056
MspI CCGG 5 cut(s) 905, 1289, 1742, 1824, 1878
MspR9I CCNGG 5 cut(s) 905, 1455, 1518, 1743, 1878
MunI CAATTG 1 cut(s) 2364
Mva1269I GAATGC 1 cut(s) 130
MvaI CCWGG 2 cut(s) 1455, 1518
MwoI GCNNNNNNNGC 5 cut(s) 926, 1243, 2868, 3056, 3062
NciI CCSGG 3 cut(s) 905, 1743, 1878
NcoI CCATGG 1 cut(s) 1407
NlaIII CATG 8 cut(s) 1004, 1280, 1411, 1775, 2057, 2236, 2294, 3069
NlaIV GGNNCC 6 cut(s) 147, 1425, 1657, 2083, 2278, 2499
NmuCI GTSAC 9 cut(s) 56, 116, 502, 691, 872, 1120, 1144, 1324, 1348
NsiI ATGCAT 1 cut(s) 3067
NspI RCATGY 3 cut(s) 1775, 2057, 3069
NspV TTCGAA 1 cut(s) 1481
PaeI GCATGC 1 cut(s) 2057
PagI TCATGA 1 cut(s) 1276
PceI AGGCCT 2 cut(s) 1510, 2999
PciI ACATGT 1 cut(s) 1771
PciSI GCTCTTC 2 cut(s) 1617, 2813
PctI GAATGC 1 cut(s) 130
PdmI GAANNNNTTC 5 cut(s) 130, 829, 1162, 1366, 2933
PfeI GAWTC 9 cut(s) 88, 1112, 1292, 1403, 1439, 1943, 1970, 2132, 2712
PfoI TCCNGGA 1 cut(s) 1876
PkrI GCNGC 7 cut(s) 1528, 1767, 2337, 2362, 3052, 3055, 3058
PscI ACATGT 1 cut(s) 1771
PsiI TTATAA 1 cut(s) 1836
Psp124BI GAGCTC 1 cut(s) 740
Psp6I CCWGG 2 cut(s) 1453, 1516
PspFI CCCAGC 1 cut(s) 1067
PspGI CCWGG 2 cut(s) 1453, 1516
PspN4I GGNNCC 6 cut(s) 147, 1425, 1657, 2083, 2278, 2499
PspPI GGNCC 2 cut(s) 297, 2147
PstNI CAGNNNCTG 1 cut(s) 1523
PsuI RGATCY 3 cut(s) 754, 992, 2081
PvuII CAGCTG 1 cut(s) 2018
RsaI GTAC 2 cut(s) 1951, 1963
RsaNI GTAC 2 cut(s) 1950, 1962
RseI CAYNNNNRTG 2 cut(s) 1142, 2901
SacI GAGCTC 1 cut(s) 740
SapI GCTCTTC 2 cut(s) 1617, 2813
SaqAI TTAA 4 cut(s) 1311, 1598, 2121, 2825
SatI GCNGC 7 cut(s) 1527, 1766, 2336, 2361, 3051, 3054, 3057
Sau96I GGNCC 2 cut(s) 297, 2147
ScaI AGTACT 1 cut(s) 1951
ScrFI CCNGG 5 cut(s) 905, 1455, 1518, 1743, 1878
SduI GDGCHC 1 cut(s) 740
SfaNI GCATC 3 cut(s) 2210, 2871, 3052
SfcI CTRYAG 4 cut(s) 135, 780, 791, 1062
SfuI TTCGAA 1 cut(s) 1481
SinI GGWCC 1 cut(s) 2147
SmiMI CAYNNNNRTG 2 cut(s) 1142, 2901
SmlI CTYRAG 1 cut(s) 2812
SmoI CTYRAG 1 cut(s) 2812
SphI GCATGC 1 cut(s) 2057
SseBI AGGCCT 2 cut(s) 1510, 2999
SsiI CCGC 3 cut(s) 698, 3050, 3056
SspMI CTAG 3 cut(s) 954, 1506, 2979
SstI GAGCTC 1 cut(s) 740
StuI AGGCCT 2 cut(s) 1510, 2999
StyD4I CCNGG 5 cut(s) 903, 1453, 1516, 1741, 1876
StyI CCWWGG 4 cut(s) 1407, 1505, 2456, 3000
TaaI ACNGT 8 cut(s) 784, 1366, 1685, 2390, 2507, 2625, 2650, 3022
TaiI ACGT 3 cut(s) 1639, 2191, 2266
TaqI TCGA 5 cut(s) 1481, 2137, 2185, 2327, 2973
TatI WGTACW 1 cut(s) 1949
TauI GCSGC 2 cut(s) 3053, 3059
TfiI GAWTC 9 cut(s) 88, 1112, 1292, 1403, 1439, 1943, 1970, 2132, 2712
Tru1I TTAA 4 cut(s) 1311, 1598, 2121, 2825
Tru9I TTAA 4 cut(s) 1311, 1598, 2121, 2825
TseFI GTSAC 9 cut(s) 56, 116, 502, 691, 872, 1120, 1144, 1324, 1348
TseI GCWGC 5 cut(s) 1526, 1765, 2335, 2360, 3053
Tsp45I GTSAC 9 cut(s) 56, 116, 502, 691, 872, 1120, 1144, 1324, 1348
TspDTI ATGAA 6 cut(s) 243, 292, 624, 1205, 1599, 2235
VpaK11BI GGWCC 1 cut(s) 2147
XagI CCTNNNNNAGG 1 cut(s) 1515
XapI RAATTY 5 cut(s) 611, 829, 1045, 1477, 2468
XceI RCATGY 3 cut(s) 1775, 2057, 3069
XmaJI CCTAGG 1 cut(s) 1505
XmnI GAANNNNTTC 5 cut(s) 130, 829, 1162, 1366, 2933
XspI CTAG 3 cut(s) 954, 1506, 2979
ZrmI AGTACT 1 cut(s) 1951
Zsp2I ATGCAT 1 cut(s) 3067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.