No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31940 AT2G35585 |
| fragaria_vesca | FvH4_5g23370 |
| malus_domestica | MD06G1024900.v1.1 |
| prunus_persica | Prupe.5G026000_v2.0.a1 Prupe.5G026000_v2.0.a1 |
| pyrus_communis | pycom06g02020 |
| rosa_chinensis | RchiOBHm_Chr7g0212381 |
| rosa_laevigata | RLG00000002894 |
| rosa_multiflora | Rmu_sc0001911.1_g000055 |
| rosa_roxburghii | Rroxscaffold_3G00246880 |
| rosa_rugosa | Rorug07G0133400 |
| rosa_samantha | Rh7AG266300 Rh7BG260200 Rh7CG283100 |
| rosa_wichuraiana | Rw7G022780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 372, 383 |
| AciI | CCGC | 2 cut(s) | 122, 318 |
| AclWI | GGATC | 1 cut(s) | 417 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 94, 290 |
| AgsI | TTSAA | 3 cut(s) | 146, 173, 329 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 379 |
| AluBI | AGCT | 1 cut(s) | 275 |
| AluI | AGCT | 1 cut(s) | 275 |
| Alw26I | GTCTC | 1 cut(s) | 327 |
| AlwI | GGATC | 1 cut(s) | 417 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 116, 278 |
| ApeKI | GCWGC | 2 cut(s) | 110, 119 |
| AsuHPI | GGTGA | 1 cut(s) | 305 |
| BaeGI | GKGCMC | 1 cut(s) | 218 |
| BbvI | GCAGC | 2 cut(s) | 106, 122 |
| BccI | CCATC | 3 cut(s) | 71, 239, 304 |
| BcoDI | GTCTC | 1 cut(s) | 327 |
| BisI | GCNGC | 3 cut(s) | 111, 120, 123 |
| BlsI | GCNGC | 3 cut(s) | 112, 121, 124 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 379 |
| BmiI | GGNNCC | 1 cut(s) | 186 |
| BmsI | GCATC | 1 cut(s) | 140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 225 |
| Bsa29I | ATCGAT | 1 cut(s) | 66 |
| BsaI | GGTCTC | 1 cut(s) | 327 |
| BsaJI | CCNNGG | 1 cut(s) | 284 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 94, 290 |
| Bse1I | ACTGG | 4 cut(s) | 39, 109, 167, 302 |
| BseCI | ATCGAT | 1 cut(s) | 66 |
| BseDI | CCNNGG | 1 cut(s) | 284 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 94, 290 |
| BseMII | CTCAG | 1 cut(s) | 216 |
| BseNI | ACTGG | 4 cut(s) | 39, 109, 167, 302 |
| BseSI | GKGCMC | 1 cut(s) | 218 |
| BseXI | GCAGC | 2 cut(s) | 106, 122 |
| BsgI | GTGCAG | 1 cut(s) | 129 |
| BshVI | ATCGAT | 1 cut(s) | 66 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 94, 290 |
| BsmAI | GTCTC | 1 cut(s) | 327 |
| Bso31I | GGTCTC | 1 cut(s) | 327 |
| Bsp1286I | GDGCHC | 1 cut(s) | 218 |
| Bsp143I | GATC | 1 cut(s) | 409 |
| BspACI | CCGC | 2 cut(s) | 122, 318 |
| BspCNI | CTCAG | 1 cut(s) | 217 |
| BspDI | ATCGAT | 1 cut(s) | 66 |
| BspLI | GGNNCC | 1 cut(s) | 186 |
| BspPI | GGATC | 1 cut(s) | 417 |
| BspTNI | GGTCTC | 1 cut(s) | 327 |
| BsrI | ACTGG | 4 cut(s) | 39, 109, 167, 302 |
| BssECI | CCNNGG | 1 cut(s) | 284 |
| BssMI | GATC | 1 cut(s) | 409 |
| BssT1I | CCWWGG | 1 cut(s) | 284 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 116, 119 |
| BstDEI | CTNAG | 1 cut(s) | 225 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstKTI | GATC | 1 cut(s) | 412 |
| BstMAI | GTCTC | 1 cut(s) | 327 |
| BstMBI | GATC | 1 cut(s) | 409 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 116, 119, 128 |
| BstSLI | GKGCMC | 1 cut(s) | 218 |
| BstV1I | GCAGC | 2 cut(s) | 106, 122 |
| Bsu15I | ATCGAT | 1 cut(s) | 66 |
| BsuTUI | ATCGAT | 1 cut(s) | 66 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| BtsI | GCAGTG | 1 cut(s) | 159 |
| BtsIMutI | CAGTG | 3 cut(s) | 159, 218, 309 |
| CaiI | CAGNNNCTG | 2 cut(s) | 116, 278 |
| ClaI | ATCGAT | 1 cut(s) | 66 |
| CseI | GACGC | 2 cut(s) | 57, 418 |
| CviAII | CATG | 2 cut(s) | 137, 433 |
| CviJI | RGCY | 6 cut(s) | 38, 166, 187, 229, 275, 339 |
| CviKI_1 | RGCY | 6 cut(s) | 38, 166, 187, 229, 275, 339 |
| DdeI | CTNAG | 1 cut(s) | 225 |
| DpnI | GATC | 1 cut(s) | 411 |
| DpnII | GATC | 1 cut(s) | 409 |
| DriI | GACNNNNNGTC | 1 cut(s) | 379 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 379 |
| Eco130I | CCWWGG | 1 cut(s) | 284 |
| Eco31I | GGTCTC | 1 cut(s) | 327 |
| EcoT14I | CCWWGG | 1 cut(s) | 284 |
| ErhI | CCWWGG | 1 cut(s) | 284 |
| FaeI | CATG | 2 cut(s) | 140, 436 |
| FaiI | YATR | 4 cut(s) | 138, 256, 343, 434 |
| FatI | CATG | 2 cut(s) | 136, 432 |
| FauI | CCCGC | 1 cut(s) | 311 |
| FblI | GTMKAC | 2 cut(s) | 372, 383 |
| Fnu4HI | GCNGC | 3 cut(s) | 111, 120, 123 |
| FokI | GGATG | 1 cut(s) | 162 |
| Fsp4HI | GCNGC | 3 cut(s) | 111, 120, 123 |
| GluI | GCNGC | 3 cut(s) | 111, 120, 123 |
| HgaI | GACGC | 2 cut(s) | 57, 418 |
| Hin1II | CATG | 2 cut(s) | 140, 436 |
| HphI | GGTGA | 1 cut(s) | 305 |
| Hpy166II | GTNNAC | 2 cut(s) | 373, 384 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 2 cut(s) | 191, 326 |
| Hpy8I | GTNNAC | 2 cut(s) | 373, 384 |
| Hpy99I | CGWCG | 1 cut(s) | 51 |
| HpyAV | CCTTC | 4 cut(s) | 240, 253, 308, 329 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 2 cut(s) | 110, 131 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 116, 119, 128 |
| HpyF3I | CTNAG | 1 cut(s) | 225 |
| Hsp92II | CATG | 2 cut(s) | 140, 436 |
| Kzo9I | GATC | 1 cut(s) | 409 |
| LmnI | GCTCC | 2 cut(s) | 184, 393 |
| LpnPI | CCDG | 6 cut(s) | 52, 90, 180, 237, 315, 331 |
| Lsp1109I | GCAGC | 2 cut(s) | 106, 122 |
| LweI | GCATC | 1 cut(s) | 140 |
| MaeIII | GTNAC | 4 cut(s) | 100, 219, 293, 353 |
| MalI | GATC | 1 cut(s) | 411 |
| MboI | GATC | 1 cut(s) | 409 |
| MboII | GAAGA | 1 cut(s) | 261 |
| MhlI | GDGCHC | 1 cut(s) | 218 |
| MluCI | AATT | 3 cut(s) | 91, 207, 404 |
| MnlI | CCTC | 3 cut(s) | 91, 198, 284 |
| MseI | TTAA | 1 cut(s) | 162 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 116, 119, 128 |
| NdeII | GATC | 1 cut(s) | 409 |
| NlaIII | CATG | 2 cut(s) | 140, 436 |
| NlaIV | GGNNCC | 1 cut(s) | 186 |
| NmuCI | GTSAC | 1 cut(s) | 293 |
| PkrI | GCNGC | 3 cut(s) | 112, 121, 124 |
| PspN4I | GGNNCC | 1 cut(s) | 186 |
| PstNI | CAGNNNCTG | 2 cut(s) | 116, 278 |
| SaqAI | TTAA | 1 cut(s) | 162 |
| SatI | GCNGC | 3 cut(s) | 111, 120, 123 |
| Sau3AI | GATC | 1 cut(s) | 409 |
| SduI | GDGCHC | 1 cut(s) | 218 |
| SetI | ASST | 6 cut(s) | 23, 102, 226, 277, 295, 350 |
| SfaNI | GCATC | 1 cut(s) | 140 |
| SmlI | CTYRAG | 1 cut(s) | 16 |
| SmoI | CTYRAG | 1 cut(s) | 16 |
| Sse9I | AATT | 3 cut(s) | 91, 207, 404 |
| SsiI | CCGC | 2 cut(s) | 122, 318 |
| StyI | CCWWGG | 1 cut(s) | 284 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TaqI | TCGA | 2 cut(s) | 46, 66 |
| TasI | AATT | 3 cut(s) | 91, 207, 404 |
| TauI | GCSGC | 1 cut(s) | 125 |
| Tru1I | TTAA | 1 cut(s) | 162 |
| Tru9I | TTAA | 1 cut(s) | 162 |
| TscAI | CASTG | 3 cut(s) | 159, 218, 309 |
| TseFI | GTSAC | 1 cut(s) | 293 |
| TseI | GCWGC | 2 cut(s) | 110, 119 |
| Tsp45I | GTSAC | 1 cut(s) | 293 |
| TspDTI | ATGAA | 2 cut(s) | 84, 412 |
| TspRI | CASTG | 3 cut(s) | 159, 218, 309 |
| XmiI | GTMKAC | 2 cut(s) | 372, 383 |