Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016172

Physical Location & Seq

Genomic Coordinates Forward (+)

756414 .. 758678

Gene Structure 2265 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G03150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 525 bp

ATGACGACGATACGTAGATTCAGCTGCAATGACCTTCTCCGATTCACTTCCGTGAATCTGGACCACCTCACTGAAACATTCAATATGTCCTTCTACATGACCTATTTAGCGAGATGGCCTGACTATTTTCATGTTGCTGAAGGTCCCGGCAATCGTGTCATGGGTTATATTATGGGTAAAGTTGAAGGACAGGGTGAATCTTGGCATGGTCATGTGACAGCCGTCACTGTCTCTCCAGAATACCGCAGGCAGCAACTTGCAAAGAAACTGATGAACCTTCTGGAAGATATAAGTGATAAGATTGATAAAGCCTACTTTGTGGATCTTTTTGTAAGAGCTTCCAACACACCAGCCATCAAGATGTATGAAAAGCTTGGATACATAATTTATAGGCGGGTTTTACGCTATTATTCAGGAGAGGAAGATGGATTAGATATGAGGAAGGCATTATCAAGAGATGTAGAGAAAAAGTCTGTGATTCCTCTCAAGAGACCTATCACACCTGATGAATTAGAGTATGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006473 GO:0006474 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017196 GO:0018193 GO:0018206 GO:0019538 GO:0031248 GO:0031365 GO:0031414 GO:0031416 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

174

Amino Acids

20.4

Weight (kDa)

7.8

Isoelectric Point (pI)

44.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	27 - 127	4.6e-18	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	41 - 128	9.6e-12	Acetyltransferase (GNAT) domain
Acetyltransf_10	PF13673	42 - 128	2e-09	Acetyltransferase (GNAT) domain
FR47	PF08445	70 - 131	1.3e-07	FR47-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0016172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03150
fragaria_vesca	FvH4_2g23390
malus_domestica	MD03G1263400.v1.1 MD11G1284200.v1.1
prunus_persica	Prupe.8G239800_v2.0.a1
pyrus_communis	pycom03g21090 pycom11g25160
rosa_chinensis	RchiOBHm_Chr6g0290851
rosa_laevigata	RLG00000012168
rosa_multiflora	Rmu_sc0009276.1_g000006
rosa_roxburghii	Rroxscaffold_7G00176690
rosa_rugosa	Rorug06G0215200 Rorug06G0215300
rosa_samantha	Rh6AG325800
rosa_wichuraiana	Rw6G028330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	244, 394
AclWI	GGATC	1 cut(s)	330
AcuI	CTGAAG	1 cut(s)	159
AgsI	TTSAA	2 cut(s)	82, 185
AleI	CACNNNNGTG	1 cut(s)	50
AluBI	AGCT	3 cut(s)	24, 338, 373
AluI	AGCT	3 cut(s)	24, 338, 373
Alw26I	GTCTC	2 cut(s)	235, 484
AlwI	GGATC	1 cut(s)	330
AoxI	GGCC	1 cut(s)	116
ApeKI	GCWGC	2 cut(s)	24, 250
AspS9I	GGNCC	2 cut(s)	61, 143
AsuC2I	CCSGG	1 cut(s)	147
AsuHPI	GGTGA	1 cut(s)	206
AvaII	GGWCC	2 cut(s)	61, 143
BbvI	GCAGC	2 cut(s)	11, 262
BccI	CCATC	3 cut(s)	108, 362, 419
BceAI	ACGGC	1 cut(s)	206
BciVI	GTATCC	1 cut(s)	371
BcnI	CCSGG	1 cut(s)	147
BcoDI	GTCTC	2 cut(s)	235, 484
BfuI	GTATCC	1 cut(s)	371
BisI	GCNGC	2 cut(s)	25, 251
BlsI	GCNGC	2 cut(s)	26, 252
Bme1390I	CCNGG	1 cut(s)	147
Bme18I	GGWCC	2 cut(s)	61, 143
BmgT120I	GGNCC	2 cut(s)	61, 143
BmiI	GGNNCC	1 cut(s)	145
BmrFI	CCNGG	1 cut(s)	147
BoxI	GACNNNNGTC	1 cut(s)	221
BpmI	CTGGAG	1 cut(s)	219
BpuEI	CTTGAG	1 cut(s)	470
BpuMI	CCSGG	1 cut(s)	147
BsaAI	YACGTR	1 cut(s)	14
BsaI	GGTCTC	1 cut(s)	484
BsaXI	ACNNNNNCTCC	2 cut(s)	217, 247
Bse3DI	GCAATG	1 cut(s)	34
BseMI	GCAATG	1 cut(s)	34
BseXI	GCAGC	2 cut(s)	11, 262
BshFI	GGCC	1 cut(s)	118
BsiSI	CCGG	1 cut(s)	147
BslFI	GGGAC	1 cut(s)	129
BsmAI	GTCTC	2 cut(s)	235, 484
BsmFI	GGGAC	1 cut(s)	129
BsnI	GGCC	1 cut(s)	118
Bso31I	GGTCTC	1 cut(s)	484
Bsp143I	GATC	1 cut(s)	322
BspACI	CCGC	2 cut(s)	244, 394
BspANI	GGCC	1 cut(s)	118
BspLI	GGNNCC	1 cut(s)	145
BspPI	GGATC	1 cut(s)	330
BspTNI	GGTCTC	1 cut(s)	484
BsrDI	GCAATG	1 cut(s)	34
BssMI	GATC	1 cut(s)	322
Bst4CI	ACNGT	1 cut(s)	229
BstBAI	YACGTR	1 cut(s)	14
BstC8I	GCNNGC	1 cut(s)	248
BstKTI	GATC	1 cut(s)	325
BstMAI	GTCTC	2 cut(s)	235, 484
BstMBI	GATC	1 cut(s)	322
BstPAI	GACNNNNGTC	1 cut(s)	221
BstSCI	CCNGG	1 cut(s)	145
BstSNI	TACGTA	1 cut(s)	14
BstV1I	GCAGC	2 cut(s)	11, 262
BstX2I	RGATCY	1 cut(s)	322
BstYI	RGATCY	1 cut(s)	322
BsuI	GTATCC	1 cut(s)	371
BsuRI	GGCC	1 cut(s)	118
BtsIMutI	CAGTG	2 cut(s)	69, 225
Cac8I	GCNNGC	1 cut(s)	248
Cfr13I	GGNCC	2 cut(s)	61, 143
CviAII	CATG	5 cut(s)	97, 131, 160, 206, 212
CviJI	RGCY	7 cut(s)	24, 118, 221, 311, 338, 353, 373
CviKI_1	RGCY	7 cut(s)	24, 118, 221, 311, 338, 353, 373
DpnI	GATC	1 cut(s)	324
DpnII	GATC	1 cut(s)	322
Eco105I	TACGTA	1 cut(s)	14
Eco31I	GGTCTC	1 cut(s)	484
Eco47I	GGWCC	2 cut(s)	61, 143
Eco57I	CTGAAG	1 cut(s)	159
EcoO109I	RGGNCCY	1 cut(s)	143
FaeI	CATG	5 cut(s)	100, 134, 163, 209, 215
FaqI	GGGAC	1 cut(s)	129
FatI	CATG	5 cut(s)	96, 130, 159, 205, 211
FauI	CCCGC	1 cut(s)	387
Fnu4HI	GCNGC	2 cut(s)	25, 251
Fsp4HI	GCNGC	2 cut(s)	25, 251
GluI	GCNGC	2 cut(s)	25, 251
GsuI	CTGGAG	1 cut(s)	219
HaeIII	GGCC	1 cut(s)	118
HapII	CCGG	1 cut(s)	147
Hin1II	CATG	5 cut(s)	100, 134, 163, 209, 215
HindIII	AAGCTT	1 cut(s)	371
HinfI	GANTC	5 cut(s)	18, 42, 55, 197, 478
HpaII	CCGG	1 cut(s)	147
HphI	GGTGA	1 cut(s)	206
Hpy188I	TCNGA	1 cut(s)	41
Hpy188III	TCNNGA	7 cut(s)	59, 236, 281, 358, 414, 453, 487
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	6 cut(s)	44, 100, 134, 179, 287, 436
HpyCH4III	ACNGT	1 cut(s)	229
HpyCH4IV	ACGT	1 cut(s)	13
HpyCH4V	TGCA	2 cut(s)	27, 260
HpySE526I	ACGT	1 cut(s)	13
Hsp92II	CATG	5 cut(s)	100, 134, 163, 209, 215
Kzo9I	GATC	1 cut(s)	322
Lsp1109I	GCAGC	2 cut(s)	11, 262
MaeII	ACGT	1 cut(s)	13
MaeIII	GTNAC	2 cut(s)	214, 223
MalI	GATC	1 cut(s)	324
MboI	GATC	1 cut(s)	322
MboII	GAAGA	2 cut(s)	296, 434
MflI	RGATCY	1 cut(s)	322
MluCI	AATT	2 cut(s)	384, 509
MmeI	TCCRAC	1 cut(s)	366
MnlI	CCTC	4 cut(s)	77, 412, 432, 492
MseI	TTAA	1 cut(s)	523
MslI	CAYNNNNRTG	3 cut(s)	50, 210, 359
MspA1I	CMGCKG	1 cut(s)	24
MspI	CCGG	1 cut(s)	147
MspR9I	CCNGG	1 cut(s)	147
NciI	CCSGG	1 cut(s)	147
NdeII	GATC	1 cut(s)	322
NlaIII	CATG	5 cut(s)	100, 134, 163, 209, 215
NlaIV	GGNNCC	1 cut(s)	145
NmuCI	GTSAC	2 cut(s)	214, 223
OliI	CACNNNNGTG	1 cut(s)	50
PfeI	GAWTC	5 cut(s)	18, 42, 55, 197, 478
PkrI	GCNGC	2 cut(s)	26, 252
Ppu21I	YACGTR	1 cut(s)	14
PpuMI	RGGWCCY	1 cut(s)	143
PshAI	GACNNNNGTC	1 cut(s)	221
Psp5II	RGGWCCY	1 cut(s)	143
PspN4I	GGNNCC	1 cut(s)	145
PspPI	GGNCC	2 cut(s)	61, 143
PspPPI	RGGWCCY	1 cut(s)	143
PsuI	RGATCY	1 cut(s)	322
PvuII	CAGCTG	1 cut(s)	24
RseI	CAYNNNNRTG	3 cut(s)	50, 210, 359
SaqAI	TTAA	1 cut(s)	523
SatI	GCNGC	2 cut(s)	25, 251
Sau3AI	GATC	1 cut(s)	322
Sau96I	GGNCC	2 cut(s)	61, 143
ScrFI	CCNGG	1 cut(s)	147
SinI	GGWCC	2 cut(s)	61, 143
SmiMI	CAYNNNNRTG	3 cut(s)	50, 210, 359
SmlI	CTYRAG	1 cut(s)	485
SmoI	CTYRAG	1 cut(s)	485
SnaBI	TACGTA	1 cut(s)	14
Sse9I	AATT	2 cut(s)	384, 509
SsiI	CCGC	2 cut(s)	244, 394
StyD4I	CCNGG	1 cut(s)	145
TaaI	ACNGT	1 cut(s)	229
TaiI	ACGT	1 cut(s)	16
TasI	AATT	2 cut(s)	384, 509
TfiI	GAWTC	5 cut(s)	18, 42, 55, 197, 478
Tru1I	TTAA	1 cut(s)	523
Tru9I	TTAA	1 cut(s)	523
TscAI	CASTG	2 cut(s)	76, 232
TseFI	GTSAC	2 cut(s)	214, 223
TseI	GCWGC	2 cut(s)	24, 250
Tsp45I	GTSAC	2 cut(s)	214, 223
TspDTI	ATGAA	4 cut(s)	119, 287, 381, 522
TspGWI	ACGGA	1 cut(s)	40
TspRI	CASTG	2 cut(s)	76, 232
VpaK11BI	GGWCC	2 cut(s)	61, 143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.