Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0016172

Physical Location & Seq

Genomic Coordinates Reverse (-)

34387138 .. 34389693

Gene Structure 2556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0215300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGAAAAACTCAACCATGGCTGCAATTTTTCTTTTTCTTCTTCTTCTTCTTCAAGTTGCAGCTGCTCAACAAGGGAATATCAGCCTAGGTGCTTCTCTATATGCCAATAACAACTCATATTGGTTATCGAATTCGGGTCAGTTTGCCTTTGGCTTCTACAGGCAAGGAAAGGACCTTGCTGTAGGCATCTGGTTCGAGAAAACCAATCCGAAAACAATCATCTGGACAGCAAATCGTGATGCTGTTAAACAAGAGCTACTACCTAATGATGTTCAATTGACTCTGAGGGACAAAGGAGTAGAGCTCATTTCAACAAACAAGAATGCCTTCCTTATACCAATTTCAAATTCTTCCCAGCCTGCTGTCAGGGCCTCCATGCTTGATTCAGGTAATTTTGTCCTCTACAATTCTGATTCAAACATCATTTGGCAGACTTTTGATGTTCCAACAGATACCATTGTATCCGGGCAGCGTCTGTTGGCTGGAACAAAGCTCATCTCCTCCATCTCGAACATGAATCACGCAAGTGGAAGGTTTCAACTGATCATGCAGACAGATGGCAACCTGGTTCAGTATCCAATTGGTCCATTTACATTGCGTCCTGATAAATATTCTTATTGGCAAACTAAGACATTCACAGATGGGAACAATGTGTCCCTCAATCTTGATCAAAATGGGGGGCTCTATCTTCTTAATTCCACTGGTTTCAAGATAAGAAGTTTATTTTCTTTTCAGAAAGGCCTTTCTATGAATCGTAGCTATCGTCTGACGATTGATGCTGATGGAATACTCCGGTTGTACTCCTACAGTTCGGTTCAGAATGATTCCTGGTCAATTGAGTGGTCACCAGATGTTAGTAAGTGTGCTCCTCTTGGCCTCTGTGGCCTAAATTCTTATTGTGTTCTTGTCTATCAGAAACCTTCTTGTGTATGTCTCCCTGGTTTCGTTTTCATCAACGAGGGCCAAATATATTTAGGCTGCAAGAGAAACTTGAGTACAGTTGGTTGCAAAGGTGAGAATGAAACTTCATATTCTATTGTTGATGTGGATAACATAGCATGGGAAAACACTCCATACTCTATTCTATCATTGAATAAGACTGCTTGTAAAGAGGACTGTTTGATGGATTGTAACTGTGAAGCTGCAGTATTTAGGGACCAGCAGTGCAGAAAACAAAAGCTCCCTCTAAGATTTGGAAGAACTCGCAAACCCGGTGTGGTGACGACCTTTGTCAAAAAGGGTACTACAGATGAGAGTTCAGGTACAAAAATCGAGAAAAAGGGAAGAAAAAATGATGACAGAGTCATGTTTATCAGCATCATTGCAACTTTAATTTTTTCACTTGTTATTATGGCAATTTCTGGCGTTGTTATATATAGATATCGTGTTTCGGATTACCGAAAGGTTACTAATTCAGCTGGTGAAGGGTTAATTGAAGGTGTTACACTGCGGTCATATACATATTGTGAACTTGAAAATGCAACCAAAGGCTTCACCAATCAAGTGGGAAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAGAGAAGTGGCAATCAAGCAACTAGAGACGGTGGTGGATGAAGGAGAGCGAGAGTTTCGTAATGAGATGAATGCAATTGGGAGAACTCATCACAAGAATCTAGTGAAATTGCTTGGCTACTGTCAAGATGGAACAAATAGGCTTCTGGTTTATGAGTACATGACCAACGGCTCACTTGCGAAATTCTTTTTCAAATCTCATGGTGGAAGGCCAACTTGGGAGGAAAGAGTCAGTACAGCCCTCAATGTAGCTCAAGGTATACTATATCTACATGAAGAGTGTGAGACACAAATCATTCATTGTGACATCAAACCAGAAAATATACTGATGAGTGAGCAGAAATGTGCGAAGCTTGCTGATTTTGGATTAGCCAAGCTGTTGAAAGCCGACCAATCAAGGACATATACTGGCTTCAGAGGAACCAGGGGTTACGTTGCACCTGAGTGGCACAGGAACATGTCGATAACAGTGAAAGCGGACGTGTACAGCTTCGGGATTGTATTGTTGGAGATCATATGCTGTCAGAGAGGTTCGACCATGGACATACCTGAGGATCTATTAACTCTTGAGAATTGGATGTACCATTGTTTGGAGGCCAATGAACTGGATAAGCTAGTGAAAAATGATGATGAGATTGACACGAGTAAACTACCGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAGGAGGAGCCATCATTGCGCCCTTCGATGAAGAAGGTGGTACTAATGCTGGAAGGGATTCTGGAGATACCATCCCCTCCAAATTCTTTCAGTTCCAGACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006473 GO:0006474 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017196 GO:0018193 GO:0018206 GO:0019538 GO:0031248 GO:0031365 GO:0031414 GO:0031416 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

779

Amino Acids

87.22

Weight (kDa)

8.29

Isoelectric Point (pI)

28.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	72 - 160	1.1e-12	D-mannose binding lectin
S_locus_glycop	PF00954	241 - 316	5.2e-07	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	499 - 760	1.5e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	500 - 759	1.9e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03150
fragaria_vesca	FvH4_2g23390
malus_domestica	MD03G1263400.v1.1 MD11G1284200.v1.1
prunus_persica	Prupe.8G239800_v2.0.a1
pyrus_communis	pycom03g21090 pycom11g25160
rosa_chinensis	RchiOBHm_Chr6g0290851
rosa_laevigata	RLG00000012168
rosa_multiflora	Rmu_sc0009276.1_g000006
rosa_roxburghii	Rroxscaffold_7G00176690
rosa_rugosa	Rorug06G0215200 Rorug06G0215300
rosa_samantha	Rh6AG325800
rosa_wichuraiana	Rw6G028330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2140
AccI	GTMKAC	1 cut(s)	1810
AciI	CCGC	2 cut(s)	1450, 2027
AclWI	GGATC	1 cut(s)	2112
AcsI	RAATTY	5 cut(s)	130, 346, 889, 1733, 2317
AcuI	CTGAAG	1 cut(s)	1948
AfaI	GTAC	9 cut(s)	800, 997, 1243, 1264, 1709, 1786, 2036, 2132, 2277
AfiI	CCNNNNNNNGG	1 cut(s)	2140
AflIII	ACRYGT	2 cut(s)	2007, 2031
AjiI	CACGTC	1 cut(s)	2032
AjnI	CCWGG	5 cut(s)	564, 827, 937, 1973, 2235
AjuI	GAANNNNNNNTTGG	4 cut(s)	331, 363, 1750, 1782
AleI	CACNNNNGTG	2 cut(s)	525, 1993
AloI	GAACNNNNNNTCC	2 cut(s)	638, 670
Alw21I	GWGCWC	2 cut(s)	306, 868
Alw26I	GTCTC	3 cut(s)	938, 1571, 1829
AlwI	GGATC	1 cut(s)	2112
AlwNI	CAGNNNCTG	1 cut(s)	475
AoxI	GGCC	7 cut(s)	369, 739, 874, 883, 961, 1760, 2145
ApeKI	GCWGC	7 cut(s)	20, 59, 62, 469, 978, 1142, 2229
ApoI	RAATTY	5 cut(s)	130, 346, 889, 1733, 2317
Asp700I	GAANNNNTTC	2 cut(s)	326, 2292
AspA2I	CCTAGG	1 cut(s)	85
AspLEI	GCGC	1 cut(s)	2256
AspS9I	GGNCC	5 cut(s)	172, 369, 584, 961, 1156
AsuC2I	CCSGG	2 cut(s)	466, 1212
AsuHPI	GGTGA	6 cut(s)	837, 1025, 1231, 1433, 1486, 1552
AvaII	GGWCC	3 cut(s)	172, 584, 1156
AvrII	CCTAGG	1 cut(s)	85
AxyI	CCTNAGG	1 cut(s)	2100
BaeI	ACNNNNGTAYC	4 cut(s)	444, 444, 477, 477
BanII	GRGCYC	2 cut(s)	306, 684
BauI	CACGAG	1 cut(s)	2191
Bbv12I	GWGCWC	2 cut(s)	306, 868
BbvI	GCAGC	7 cut(s)	7, 49, 71, 481, 965, 1129, 2216
BccI	CCATC	9 cut(s)	512, 551, 635, 776, 1117, 1673, 2203, 2254, 2314
BceAI	ACGGC	1 cut(s)	1735
BcgI	CGANNNNNNTGC	2 cut(s)	175, 209
BciT130I	CCWGG	5 cut(s)	566, 829, 939, 1975, 2237
BciVI	GTATCC	2 cut(s)	472, 585
BclI	TGATCA	2 cut(s)	543, 667
BcnI	CCSGG	2 cut(s)	466, 1212
BcoDI	GTCTC	3 cut(s)	938, 1571, 1829
BfaI	CTAG	4 cut(s)	86, 1574, 1652, 2165
BfmI	CTRYAG	5 cut(s)	157, 180, 805, 1143, 1245
BfuI	GTATCC	2 cut(s)	472, 585
BglI	GCCNNNNNGGC	1 cut(s)	882
BisI	GCNGC	7 cut(s)	21, 60, 63, 470, 979, 1143, 2230
BlnI	CCTAGG	1 cut(s)	85
BlsI	GCNGC	7 cut(s)	22, 61, 64, 471, 980, 1144, 2231
Bme1390I	CCNGG	7 cut(s)	466, 566, 829, 939, 1212, 1975, 2237
Bme18I	GGWCC	3 cut(s)	172, 584, 1156
BmgBI	CACGTC	1 cut(s)	2032
BmgT120I	GGNCC	5 cut(s)	172, 369, 584, 961, 1156
BmiI	GGNNCC	3 cut(s)	1157, 1972, 2244
BmrFI	CCNGG	7 cut(s)	466, 566, 829, 939, 1212, 1975, 2237
BmsI	GCATC	5 cut(s)	195, 229, 766, 1326, 2241
BoxI	GACNNNNGTC	1 cut(s)	1229
BplI	GAGNNNNNCTC	2 cut(s)	288, 320
BpmI	CTGGAG	1 cut(s)	2318
BpuEI	CTTGAG	3 cut(s)	1012, 1788, 2138
BpuMI	CCSGG	2 cut(s)	466, 1212
BsaJI	CCNNGG	5 cut(s)	15, 85, 937, 1974, 2088
BsaWI	WCCGGW	2 cut(s)	792, 2203
BsaXI	ACNNNNNCTCC	2 cut(s)	1164, 1194
Bsc4I	CCNNNNNNNGG	1 cut(s)	2140
Bse1I	ACTGG	3 cut(s)	706, 1963, 2160
Bse21I	CCTNAGG	1 cut(s)	2100
Bse3DI	GCAATG	3 cut(s)	593, 1320, 2249
BseBI	CCWGG	5 cut(s)	566, 829, 939, 1975, 2237
BseDI	CCNNGG	5 cut(s)	15, 85, 937, 1974, 2088
BseGI	GGATG	4 cut(s)	1594, 2133, 2232, 2306
BseLI	CCNNNNNNNGG	1 cut(s)	2140
BseMI	GCAATG	3 cut(s)	593, 1320, 2249
BseMII	CTCAG	3 cut(s)	275, 1983, 2091
BseNI	ACTGG	3 cut(s)	706, 1963, 2160
BseRI	GAGGAG	3 cut(s)	490, 858, 2255
BseXI	GCAGC	7 cut(s)	7, 49, 71, 481, 965, 1129, 2216
BseYI	CCCAGC	1 cut(s)	354
BsgI	GTGCAG	1 cut(s)	1186
BshFI	GGCC	7 cut(s)	371, 741, 876, 885, 963, 1762, 2147
BsiHKAI	GWGCWC	2 cut(s)	306, 868
BsiSI	CCGG	4 cut(s)	465, 793, 1212, 2204
BslFI	GGGAC	4 cut(s)	302, 640, 1169, 1537
BslI	CCNNNNNNNGG	1 cut(s)	2140
BsmAI	GTCTC	3 cut(s)	938, 1571, 1829
BsmBI	CGTCTC	1 cut(s)	1571
BsmFI	GGGAC	4 cut(s)	302, 640, 1169, 1537
BsmI	GAATGC	2 cut(s)	328, 1627
BsnI	GGCC	7 cut(s)	371, 741, 876, 885, 963, 1762, 2147
Bsp1286I	GDGCHC	3 cut(s)	306, 684, 868
Bsp1407I	TGTACA	1 cut(s)	2034
Bsp143I	GATC	4 cut(s)	543, 667, 2061, 2104
Bsp19I	CCATGG	2 cut(s)	15, 2088
BspACI	CCGC	2 cut(s)	1450, 2027
BspANI	GGCC	7 cut(s)	371, 741, 876, 885, 963, 1762, 2147
BspCNI	CTCAG	3 cut(s)	276, 1984, 2092
BspLI	GGNNCC	3 cut(s)	1157, 1972, 2244
BspMAI	CTGCAG	1 cut(s)	1147
BspPI	GGATC	1 cut(s)	2112
BsrDI	GCAATG	3 cut(s)	593, 1320, 2249
BsrGI	TGTACA	1 cut(s)	2034
BsrI	ACTGG	3 cut(s)	706, 1963, 2160
BssECI	CCNNGG	5 cut(s)	15, 85, 937, 1974, 2088
BssMI	GATC	4 cut(s)	543, 667, 2061, 2104
BssNAI	GTATAC	1 cut(s)	1811
BssSI	CACGAG	1 cut(s)	2191
BssT1I	CCWWGG	3 cut(s)	15, 85, 2088
Bst1107I	GTATAC	1 cut(s)	1811
Bst2BI	CACGAG	1 cut(s)	2191
Bst2UI	CCWGG	5 cut(s)	566, 829, 939, 1975, 2237
Bst4CI	ACNGT	8 cut(s)	809, 1000, 1118, 1136, 1528, 1582, 1673, 2020
Bst6I	CTCTTC	1 cut(s)	1821
BstAUI	TGTACA	1 cut(s)	2034
BstC8I	GCNNGC	2 cut(s)	360, 1905
BstDEI	CTNAG	5 cut(s)	284, 627, 1187, 1992, 2100
BstDSI	CCRYGG	2 cut(s)	15, 2088
BstEII	GGTNACC	1 cut(s)	843
BstF5I	GGATG	4 cut(s)	1594, 2133, 2232, 2306
BstHHI	GCGC	1 cut(s)	2256
BstKTI	GATC	4 cut(s)	546, 670, 2064, 2107
BstMAI	GTCTC	3 cut(s)	938, 1571, 1829
BstMBI	GATC	4 cut(s)	543, 667, 2061, 2104
BstMWI	GCNNNNNNNGC	4 cut(s)	368, 882, 1904, 2251
BstNI	CCWGG	5 cut(s)	566, 829, 939, 1975, 2237
BstNSI	RCATGY	1 cut(s)	2011
BstPAI	GACNNNNGTC	1 cut(s)	1229
BstPI	GGTNACC	1 cut(s)	843
BstSCI	CCNGG	7 cut(s)	464, 564, 827, 937, 1210, 1973, 2235
BstSFI	CTRYAG	5 cut(s)	157, 180, 805, 1143, 1245
BstV1I	GCAGC	7 cut(s)	7, 49, 71, 481, 965, 1129, 2216
BstX2I	RGATCY	1 cut(s)	2104
BstXI	CCANNNNNNTGG	2 cut(s)	1504, 2155
BstYI	RGATCY	1 cut(s)	2104
BstZ17I	GTATAC	1 cut(s)	1811
Bsu36I	CCTNAGG	1 cut(s)	2100
BsuI	GTATCC	2 cut(s)	472, 585
BsuRI	GGCC	7 cut(s)	371, 741, 876, 885, 963, 1762, 2147
BtgI	CCRYGG	2 cut(s)	15, 2088
BtrI	CACGTC	1 cut(s)	2032
BtsCI	GGATG	4 cut(s)	1594, 2133, 2232, 2306
BtsI	GCAGTG	2 cut(s)	1169, 1445
BtsIMutI	CAGTG	4 cut(s)	699, 1169, 1445, 2025
Cac8I	GCNNGC	2 cut(s)	360, 1905
CaiI	CAGNNNCTG	1 cut(s)	475
CfoI	GCGC	1 cut(s)	2256
Cfr13I	GGNCC	5 cut(s)	172, 369, 584, 961, 1156
CseI	GACGC	2 cut(s)	461, 587
CsiI	ACCWGGT	1 cut(s)	564
Csp6I	GTAC	9 cut(s)	799, 996, 1242, 1263, 1708, 1785, 2035, 2131, 2276
CviQI	GTAC	9 cut(s)	799, 996, 1242, 1263, 1708, 1785, 2035, 2131, 2276
DdeI	CTNAG	5 cut(s)	284, 627, 1187, 1992, 2100
DpnI	GATC	4 cut(s)	545, 669, 2063, 2106
DpnII	GATC	4 cut(s)	543, 667, 2061, 2104
DraI	TTTAAA	1 cut(s)	1534
Eam1104I	CTCTTC	1 cut(s)	1821
EarI	CTCTTC	1 cut(s)	1821
Ecl136II	GAGCTC	1 cut(s)	304
Eco130I	CCWWGG	3 cut(s)	15, 85, 2088
Eco147I	AGGCCT	1 cut(s)	741
Eco24I	GRGCYC	2 cut(s)	306, 684
Eco32I	GATATC	1 cut(s)	1382
Eco47I	GGWCC	3 cut(s)	172, 584, 1156
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	1 cut(s)	1948
Eco81I	CCTNAGG	1 cut(s)	2100
Eco91I	GGTNACC	1 cut(s)	843
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	2 cut(s)	172, 369
EcoO65I	GGTNACC	1 cut(s)	843
EcoRI	GAATTC	1 cut(s)	130
EcoRII	CCWGG	5 cut(s)	564, 827, 937, 1973, 2235
EcoRV	GATATC	1 cut(s)	1382
EcoT14I	CCWWGG	3 cut(s)	15, 85, 2088
EcoT38I	GRGCYC	2 cut(s)	306, 684
ErhI	CCWWGG	3 cut(s)	15, 85, 2088
Esp3I	CGTCTC	1 cut(s)	1571
FalI	AAGNNNNNCTT	6 cut(s)	311, 343, 974, 1006, 1750, 1782
FaqI	GGGAC	4 cut(s)	302, 640, 1169, 1537
FauNDI	CATATG	1 cut(s)	2066
FbaI	TGATCA	2 cut(s)	543, 667
FblI	GTMKAC	1 cut(s)	1810
Fnu4HI	GCNGC	7 cut(s)	21, 60, 63, 470, 979, 1143, 2230
FokI	GGATG	4 cut(s)	1601, 2140, 2219, 2293
FriOI	GRGCYC	2 cut(s)	306, 684
Fsp4HI	GCNGC	7 cut(s)	21, 60, 63, 470, 979, 1143, 2230
FspBI	CTAG	4 cut(s)	86, 1574, 1652, 2165
GlaI	GCGC	1 cut(s)	2255
GluI	GCNGC	7 cut(s)	21, 60, 63, 470, 979, 1143, 2230
GsaI	CCCAGC	1 cut(s)	358
GsuI	CTGGAG	1 cut(s)	2318
HaeIII	GGCC	7 cut(s)	371, 741, 876, 885, 963, 1762, 2147
HapII	CCGG	4 cut(s)	465, 793, 1212, 2204
HgaI	GACGC	2 cut(s)	461, 587
HhaI	GCGC	1 cut(s)	2256
Hin6I	GCGC	1 cut(s)	2254
HinP1I	GCGC	1 cut(s)	2254
HindIII	AAGCTT	2 cut(s)	1901, 2216
HpaII	CCGG	4 cut(s)	465, 793, 1212, 2204
HphI	GGTGA	6 cut(s)	837, 1025, 1231, 1433, 1486, 1552
Hpy166II	GTNNAC	4 cut(s)	1469, 1811, 2035, 2198
Hpy8I	GTNNAC	4 cut(s)	1469, 1811, 2035, 2198
HpyCH4III	ACNGT	8 cut(s)	809, 1000, 1118, 1136, 1528, 1582, 1673, 2020
HpyCH4IV	ACGT	2 cut(s)	1983, 2031
HpyF10VI	GCNNNNNNNGC	4 cut(s)	368, 882, 1904, 2251
HpyF3I	CTNAG	5 cut(s)	284, 627, 1187, 1992, 2100
HpySE526I	ACGT	2 cut(s)	1983, 2031
HspAI	GCGC	1 cut(s)	2254
Ksp22I	TGATCA	2 cut(s)	543, 667
Kzo9I	GATC	4 cut(s)	543, 667, 2061, 2104
LmnI	GCTCC	4 cut(s)	871, 1185, 1514, 2242
Lsp1109I	GCAGC	7 cut(s)	7, 49, 71, 481, 965, 1129, 2216
LweI	GCATC	5 cut(s)	195, 229, 766, 1326, 2241
MabI	ACCWGGT	1 cut(s)	564
MaeI	CTAG	4 cut(s)	86, 1574, 1652, 2165
MaeII	ACGT	2 cut(s)	1983, 2031
MaeIII	GTNAC	7 cut(s)	843, 1130, 1219, 1405, 1441, 1853, 1979
MalI	GATC	4 cut(s)	545, 669, 2063, 2106
MboI	GATC	4 cut(s)	543, 667, 2061, 2104
MfeI	CAATTG	4 cut(s)	275, 579, 834, 1626
MflI	RGATCY	1 cut(s)	2104
MhlI	GDGCHC	3 cut(s)	306, 684, 868
MlyI	GAGTC	3 cut(s)	274, 1311, 1788
MmeI	TCCRAC	2 cut(s)	470, 2037
MroXI	GAANNNNTTC	2 cut(s)	326, 2292
MseI	TTAA	7 cut(s)	246, 693, 1331, 1430, 1533, 2111, 2214
MslI	CAYNNNNRTG	2 cut(s)	525, 1993
MspA1I	CMGCKG	2 cut(s)	62, 1418
MspI	CCGG	4 cut(s)	465, 793, 1212, 2204
MspR9I	CCNGG	7 cut(s)	466, 566, 829, 939, 1212, 1975, 2237
MunI	CAATTG	4 cut(s)	275, 579, 834, 1626
Mva1269I	GAATGC	2 cut(s)	328, 1627
MvaI	CCWGG	5 cut(s)	566, 829, 939, 1975, 2237
MwoI	GCNNNNNNNGC	4 cut(s)	368, 882, 1904, 2251
NciI	CCSGG	2 cut(s)	466, 1212
NcoI	CCATGG	2 cut(s)	15, 2088
NdeI	CATATG	1 cut(s)	2066
NdeII	GATC	4 cut(s)	543, 667, 2061, 2104
NlaIV	GGNNCC	3 cut(s)	1157, 1972, 2244
NmuCI	GTSAC	3 cut(s)	843, 1219, 1853
NspI	RCATGY	1 cut(s)	2011
OliI	CACNNNNGTG	2 cut(s)	525, 1993
PceI	AGGCCT	1 cut(s)	741
PciI	ACATGT	1 cut(s)	2007
PcsI	WCGNNNNNNNCGW	1 cut(s)	760
PctI	GAATGC	2 cut(s)	328, 1627
PdmI	GAANNNNTTC	2 cut(s)	326, 2292
PfeI	GAWTC	7 cut(s)	383, 413, 517, 751, 824, 1648, 2293
PflFI	GACNNNGTC	1 cut(s)	1301
PflMI	CCANNNNNTGG	1 cut(s)	2140
PfoI	TCCNGGA	1 cut(s)	2235
PkrI	GCNGC	7 cut(s)	22, 61, 64, 471, 980, 1144, 2231
PleI	GAGTC	3 cut(s)	274, 1310, 1787
PpsI	GAGTC	3 cut(s)	274, 1310, 1787
PpuMI	RGGWCCY	1 cut(s)	172
PscI	ACATGT	1 cut(s)	2007
PshAI	GACNNNNGTC	1 cut(s)	1229
Psp124BI	GAGCTC	1 cut(s)	306
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	5 cut(s)	564, 827, 937, 1973, 2235
PspEI	GGTNACC	1 cut(s)	843
PspFI	CCCAGC	1 cut(s)	354
PspGI	CCWGG	5 cut(s)	564, 827, 937, 1973, 2235
PspN4I	GGNNCC	3 cut(s)	1157, 1972, 2244
PspPI	GGNCC	5 cut(s)	172, 369, 584, 961, 1156
PspPPI	RGGWCCY	1 cut(s)	172
PstI	CTGCAG	1 cut(s)	1147
PstNI	CAGNNNCTG	1 cut(s)	475
PsuI	RGATCY	1 cut(s)	2104
PsyI	GACNNNGTC	1 cut(s)	1301
PvuII	CAGCTG	2 cut(s)	62, 1418
RsaI	GTAC	9 cut(s)	800, 997, 1243, 1264, 1709, 1786, 2036, 2132, 2277
RsaNI	GTAC	9 cut(s)	799, 996, 1242, 1263, 1708, 1785, 2035, 2131, 2276
RseI	CAYNNNNRTG	2 cut(s)	525, 1993
SacI	GAGCTC	1 cut(s)	306
SaqAI	TTAA	7 cut(s)	246, 693, 1331, 1430, 1533, 2111, 2214
SatI	GCNGC	7 cut(s)	21, 60, 63, 470, 979, 1143, 2230
Sau3AI	GATC	4 cut(s)	543, 667, 2061, 2104
Sau96I	GGNCC	5 cut(s)	172, 369, 584, 961, 1156
SchI	GAGTC	3 cut(s)	274, 1311, 1788
ScrFI	CCNGG	7 cut(s)	466, 566, 829, 939, 1212, 1975, 2237
SduI	GDGCHC	3 cut(s)	306, 684, 868
SexAI	ACCWGGT	1 cut(s)	564
SfaNI	GCATC	5 cut(s)	195, 229, 766, 1326, 2241
SfcI	CTRYAG	5 cut(s)	157, 180, 805, 1143, 1245
SfiI	GGCCNNNNNGGCC	1 cut(s)	882
SinI	GGWCC	3 cut(s)	172, 584, 1156
SmiMI	CAYNNNNRTG	2 cut(s)	525, 1993
SmlI	CTYRAG	3 cut(s)	991, 1803, 2117
SmoI	CTYRAG	3 cut(s)	991, 1803, 2117
SseBI	AGGCCT	1 cut(s)	741
SsiI	CCGC	2 cut(s)	1450, 2027
SspI	AATATT	1 cut(s)	611
SspMI	CTAG	4 cut(s)	86, 1574, 1652, 2165
SstI	GAGCTC	1 cut(s)	306
StuI	AGGCCT	1 cut(s)	741
StyD4I	CCNGG	7 cut(s)	464, 564, 827, 937, 1210, 1973, 2235
StyI	CCWWGG	3 cut(s)	15, 85, 2088
TaaI	ACNGT	8 cut(s)	809, 1000, 1118, 1136, 1528, 1582, 1673, 2020
TaiI	ACGT	2 cut(s)	1986, 2034
TaqI	TCGA	7 cut(s)	128, 195, 509, 1272, 2012, 2084, 2261
TatI	WGTACW	5 cut(s)	798, 995, 1707, 1784, 2034
TfiI	GAWTC	7 cut(s)	383, 413, 517, 751, 824, 1648, 2293
Tru1I	TTAA	7 cut(s)	246, 693, 1331, 1430, 1533, 2111, 2214
Tru9I	TTAA	7 cut(s)	246, 693, 1331, 1430, 1533, 2111, 2214
TscAI	CASTG	4 cut(s)	706, 1169, 1452, 2025
TseFI	GTSAC	3 cut(s)	843, 1219, 1853
TseI	GCWGC	7 cut(s)	20, 59, 62, 469, 978, 1142, 2229
Tsp45I	GTSAC	3 cut(s)	843, 1219, 1853
TspRI	CASTG	4 cut(s)	706, 1169, 1452, 2025
Tth111I	GACNNNGTC	1 cut(s)	1301
Van91I	CCANNNNNTGG	1 cut(s)	2140
VpaK11BI	GGWCC	3 cut(s)	172, 584, 1156
XapI	RAATTY	5 cut(s)	130, 346, 889, 1733, 2317
XceI	RCATGY	1 cut(s)	2011
XmaJI	CCTAGG	1 cut(s)	85
XmiI	GTMKAC	1 cut(s)	1810
XmnI	GAANNNNTTC	2 cut(s)	326, 2292
XspI	CTAG	4 cut(s)	86, 1574, 1652, 2165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.