Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0016172

Physical Location & Seq

Genomic Coordinates Forward (+)

21054415 .. 21057307

Gene Structure 2893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G239800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 525 bp

ATGACTACGATTCGCAGATTTTGCTGCAATGATCTTCTTCGTTTTACCTCTGTCAATCTTGACCACCTCACTGAAACTTTCAATATGTCATTTTATATGACCTATTTAGCAAGATGGCCCGACTATTTTCATGTTGCCGAAGCCCCGGGACACCGAATCATGGGTTACATTATGGGAAAGGTTGAAGGGCAAGGTGAGTCATGGCATGGTCATGTAACTGCAGTAACTGTTGCGCCAGAATATCGAAGGCAGCAATTGGCCAAGAAACTCATGAACTTGCTGGAAGACTTTAGCGATAAGATTGATAAGGGTTACTTTGTTGATCTTTTTGTGAGAGCATCAAACACACCAGCCATAAAGATGTATGAAAAGCTTGGTTACGTGATCTATAGACGAGTCCTACGGTATTATTCAGGGGAGGAAGATGGGTTAGATATGAGGAAAGCATTATCTCGGGACGTTGATAAGAAGTCAATCATACCCCTCAAACGGCCGGTTACTCCTGATGAATTAGAGTATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006473 GO:0006474 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017196 GO:0018193 GO:0018206 GO:0019538 GO:0031248 GO:0031365 GO:0031414 GO:0031416 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

175

Amino Acids

20.44

Weight (kDa)

7.76

Isoelectric Point (pI)

40.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03150
fragaria_vesca	FvH4_2g23390
malus_domestica	MD03G1263400.v1.1 MD11G1284200.v1.1
prunus_persica	Prupe.8G239800_v2.0.a1
pyrus_communis	pycom03g21090 pycom11g25160
rosa_chinensis	RchiOBHm_Chr6g0290851
rosa_laevigata	RLG00000012168
rosa_multiflora	Rmu_sc0009276.1_g000006
rosa_roxburghii	Rroxscaffold_7G00176690
rosa_rugosa	Rorug06G0215200 Rorug06G0215300
rosa_samantha	Rh6AG325800
rosa_wichuraiana	Rw6G028330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AcoI	YGGCCR	2 cut(s)	258, 491
AfiI	CCNNNNNNNGG	2 cut(s)	160, 489
AgsI	TTSAA	2 cut(s)	82, 185
AluBI	AGCT	1 cut(s)	373
AluI	AGCT	1 cut(s)	373
AlwNI	CAGNNNCTG	1 cut(s)	227
Ama87I	CYCGRG	2 cut(s)	145, 453
AoxI	GGCC	3 cut(s)	116, 258, 491
ApeKI	GCWGC	2 cut(s)	24, 250
AspLEI	GCGC	1 cut(s)	235
AspS9I	GGNCC	1 cut(s)	117
AsuC2I	CCSGG	2 cut(s)	146, 147
AsuHPI	GGTGA	1 cut(s)	206
AvaI	CYCGRG	2 cut(s)	145, 453
BalI	TGGCCA	1 cut(s)	260
BbsI	GAAGAC	1 cut(s)	291
BbvI	GCAGC	2 cut(s)	11, 262
BccI	CCATC	2 cut(s)	108, 419
BceAI	ACGGC	1 cut(s)	506
BcnI	CCSGG	2 cut(s)	146, 147
BfmI	CTRYAG	2 cut(s)	219, 388
BisI	GCNGC	2 cut(s)	25, 251
BlsI	GCNGC	2 cut(s)	26, 252
Bme1390I	CCNGG	2 cut(s)	146, 147
BmeT110I	CYCGRG	2 cut(s)	145, 453
BmgT120I	GGNCC	1 cut(s)	117
BmrFI	CCNGG	2 cut(s)	146, 147
BmsI	GCATC	1 cut(s)	347
BpiI	GAAGAC	1 cut(s)	291
BpuMI	CCSGG	2 cut(s)	146, 147
BsaAI	YACGTR	1 cut(s)	382
BsaJI	CCNNGG	2 cut(s)	144, 145
Bsc4I	CCNNNNNNNGG	2 cut(s)	160, 489
Bse118I	RCCGGY	1 cut(s)	493
Bse3DI	GCAATG	1 cut(s)	34
BseDI	CCNNGG	2 cut(s)	144, 145
BseLI	CCNNNNNNNGG	2 cut(s)	160, 489
BseMI	GCAATG	1 cut(s)	34
BseX3I	CGGCCG	1 cut(s)	491
BseXI	GCAGC	2 cut(s)	11, 262
Bsh1285I	CGRYCG	1 cut(s)	494
BshFI	GGCC	3 cut(s)	118, 260, 493
BsiEI	CGRYCG	1 cut(s)	494
BsiHKCI	CYCGRG	2 cut(s)	145, 453
BsiSI	CCGG	2 cut(s)	146, 494
BslFI	GGGAC	2 cut(s)	162, 470
BslI	CCNNNNNNNGG	2 cut(s)	160, 489
BsmFI	GGGAC	2 cut(s)	162, 470
BsnI	GGCC	3 cut(s)	118, 260, 493
BsoBI	CYCGRG	2 cut(s)	145, 453
Bsp143I	GATC	3 cut(s)	31, 322, 384
BspANI	GGCC	3 cut(s)	118, 260, 493
BspHI	TCATGA	1 cut(s)	270
BspMAI	CTGCAG	1 cut(s)	223
BsrDI	GCAATG	1 cut(s)	34
BsrFI	RCCGGY	1 cut(s)	493
BssAI	RCCGGY	1 cut(s)	493
BssECI	CCNNGG	2 cut(s)	144, 145
BssMI	GATC	3 cut(s)	31, 322, 384
Bst4CI	ACNGT	2 cut(s)	229, 405
BstAPI	GCANNNNNTGC	1 cut(s)	21
BstBAI	YACGTR	1 cut(s)	382
BstHHI	GCGC	1 cut(s)	235
BstKTI	GATC	3 cut(s)	34, 325, 387
BstMBI	GATC	3 cut(s)	31, 322, 384
BstMCI	CGRYCG	1 cut(s)	494
BstMWI	GCNNNNNNNGC	1 cut(s)	21
BstSCI	CCNGG	2 cut(s)	144, 145
BstSFI	CTRYAG	2 cut(s)	219, 388
BstV1I	GCAGC	2 cut(s)	11, 262
BstV2I	GAAGAC	1 cut(s)	291
BstZI	CGGCCG	1 cut(s)	491
BsuRI	GGCC	3 cut(s)	118, 260, 493
BtsIMutI	CAGTG	1 cut(s)	69
CaiI	CAGNNNCTG	1 cut(s)	227
CciI	TCATGA	1 cut(s)	270
CfoI	GCGC	1 cut(s)	235
Cfr10I	RCCGGY	1 cut(s)	493
Cfr13I	GGNCC	1 cut(s)	117
Cfr9I	CCCGGG	1 cut(s)	145
CviAII	CATG	6 cut(s)	131, 160, 201, 206, 212, 271
CviJI	RGCY	6 cut(s)	118, 143, 260, 353, 373, 493
CviKI_1	RGCY	6 cut(s)	118, 143, 260, 353, 373, 493
DpnI	GATC	3 cut(s)	33, 324, 386
DpnII	GATC	3 cut(s)	31, 322, 384
EaeI	YGGCCR	2 cut(s)	258, 491
EagI	CGGCCG	1 cut(s)	491
EclXI	CGGCCG	1 cut(s)	491
Eco52I	CGGCCG	1 cut(s)	491
Eco88I	CYCGRG	2 cut(s)	145, 453
FaeI	CATG	6 cut(s)	134, 163, 204, 209, 215, 274
FalI	AAGNNNNNCTT	2 cut(s)	299, 331
FaqI	GGGAC	2 cut(s)	162, 470
FatI	CATG	6 cut(s)	130, 159, 200, 205, 211, 270
Fnu4HI	GCNGC	2 cut(s)	25, 251
Fsp4HI	GCNGC	2 cut(s)	25, 251
GlaI	GCGC	1 cut(s)	234
GluI	GCNGC	2 cut(s)	25, 251
HaeIII	GGCC	3 cut(s)	118, 260, 493
HapII	CCGG	2 cut(s)	146, 494
HhaI	GCGC	1 cut(s)	235
Hin1II	CATG	6 cut(s)	134, 163, 204, 209, 215, 274
Hin6I	GCGC	1 cut(s)	233
HinP1I	GCGC	1 cut(s)	233
HindIII	AAGCTT	1 cut(s)	371
HinfI	GANTC	4 cut(s)	10, 156, 197, 396
HpaII	CCGG	2 cut(s)	146, 494
HphI	GGTGA	1 cut(s)	206
Hpy188III	TCNNGA	4 cut(s)	59, 271, 455, 503
HpyAV	CCTTC	2 cut(s)	179, 240
HpyCH4III	ACNGT	2 cut(s)	229, 405
HpyCH4IV	ACGT	2 cut(s)	381, 459
HpyCH4V	TGCA	2 cut(s)	27, 221
HpyF10VI	GCNNNNNNNGC	1 cut(s)	21
HpySE526I	ACGT	2 cut(s)	381, 459
Hsp92II	CATG	6 cut(s)	134, 163, 204, 209, 215, 274
HspAI	GCGC	1 cut(s)	233
Kzo9I	GATC	3 cut(s)	31, 322, 384
LpnPI	CCDG	7 cut(s)	159, 249, 266, 363, 399, 507, 516
Lsp1109I	GCAGC	2 cut(s)	11, 262
LweI	GCATC	1 cut(s)	347
MaeII	ACGT	2 cut(s)	381, 459
MaeIII	GTNAC	6 cut(s)	164, 214, 223, 311, 377, 496
MalI	GATC	3 cut(s)	33, 324, 386
MboI	GATC	3 cut(s)	31, 322, 384
MboII	GAAGA	4 cut(s)	26, 29, 296, 434
MfeI	CAATTG	1 cut(s)	254
MlsI	TGGCCA	1 cut(s)	260
MluCI	AATT	2 cut(s)	254, 509
MluNI	TGGCCA	1 cut(s)	260
MlyI	GAGTC	2 cut(s)	206, 405
MnlI	CCTC	5 cut(s)	58, 77, 412, 432, 494
Mox20I	TGGCCA	1 cut(s)	260
MscI	TGGCCA	1 cut(s)	260
MslI	CAYNNNNRTG	2 cut(s)	210, 359
Msp20I	TGGCCA	1 cut(s)	260
MspI	CCGG	2 cut(s)	146, 494
MspR9I	CCNGG	2 cut(s)	146, 147
MunI	CAATTG	1 cut(s)	254
MwoI	GCNNNNNNNGC	1 cut(s)	21
NciI	CCSGG	2 cut(s)	146, 147
NdeII	GATC	3 cut(s)	31, 322, 384
NlaIII	CATG	6 cut(s)	134, 163, 204, 209, 215, 274
PagI	TCATGA	1 cut(s)	270
PfeI	GAWTC	2 cut(s)	10, 156
PkrI	GCNGC	2 cut(s)	26, 252
PleI	GAGTC	2 cut(s)	205, 404
PpsI	GAGTC	2 cut(s)	205, 404
Ppu21I	YACGTR	1 cut(s)	382
PspPI	GGNCC	1 cut(s)	117
PstI	CTGCAG	1 cut(s)	223
PstNI	CAGNNNCTG	1 cut(s)	227
RseI	CAYNNNNRTG	2 cut(s)	210, 359
SatI	GCNGC	2 cut(s)	25, 251
Sau3AI	GATC	3 cut(s)	31, 322, 384
Sau96I	GGNCC	1 cut(s)	117
SchI	GAGTC	2 cut(s)	206, 405
ScrFI	CCNGG	2 cut(s)	146, 147
SetI	ASST	8 cut(s)	50, 69, 104, 183, 196, 375, 384, 462
SfaNI	GCATC	1 cut(s)	347
SfcI	CTRYAG	2 cut(s)	219, 388
SmaI	CCCGGG	1 cut(s)	147
SmiMI	CAYNNNNRTG	2 cut(s)	210, 359
Sse9I	AATT	2 cut(s)	254, 509
StyD4I	CCNGG	2 cut(s)	144, 145
TaaI	ACNGT	2 cut(s)	229, 405
TaiI	ACGT	2 cut(s)	384, 462
TaqI	TCGA	1 cut(s)	244
TasI	AATT	2 cut(s)	254, 509
TfiI	GAWTC	2 cut(s)	10, 156
TscAI	CASTG	1 cut(s)	76
TseI	GCWGC	2 cut(s)	24, 250
TspDTI	ATGAA	4 cut(s)	119, 287, 381, 522
TspMI	CCCGGG	1 cut(s)	145
TspRI	CASTG	1 cut(s)	76
XmaI	CCCGGG	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.