AT1G04390

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007946
Physical Location & Seq
Reverse (-)
1179310 .. 1183704
4395 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04390.1

Sequence Viewer

Length: 3009 bp
ATGGCGTCGTCAAAGGGAGGAAACACCACTGCCCACATCAATACTCTTCACCACCGTCTTTATCACGCTCTCAATCTTGGCTTCAGGGTTTGTGATGAGAAAGAGAAGAAGTGGAAGTGTACTGATATTGAGATACAGAGACATGTCGTGAAGTCGATTTCAGCTTTCCTTGATTGTTTTTCTCGTGCAACAGCTAACAATCGTCTTATCAAGGATTCAATTTCTGATATAGCCGGGGCTTTGGTGTTTATTCTAGGGAGTAAAAACAGAGCAGTGGTTGGTTTGGCAGCCAATGTAGTTATTAGGTTGATTCGTATTGTTCCTCCTTCTATCTTGCATTCATATTCTTTGGATCTCGTGGAGTCTTTATCACCTCTGTTATGTTGTCAACAATTCGATGTTTCGCTTCCCTGTGCCGTTGCTTTGAACGCTATTCTTGTGAACGTGAGAGAAACTAAGGAAAAAGAAGTGTGGAAGATTTTAGAGGATGAGAAAACTGTGGTTTCTGTTGTTGGTAATTTGCAGATCTTTTCTGAGGGGAGTATGTCAGTGGAATGGTTTCAAGAGATGGCTTTGCTTCTGAGTACAATTATGTTGAAGTGGCCTCAGTCTAGGTATTCTGTTTGGAACAACCCTGCCTTGATGGGTGTATTGGAGAGTGTTAGTCAGAAGCCTGATATGGGTTTGACAGTTGCAACTTTGAAGCTCTATTCTTCTCTAGCTCTTTGTGGCCATGGTGCCAATGAGCTTTTAGACAATGGGAAGCCTATGTTAGATATGATGATTAGCTGCATGGAGGAGTCAAGCTCTCAAAATGCTCGAATTGAAGGGTTAAAGCTAGCACAAAGGCTTGCGACAGGTAACCGAGAGTGCTTGAAGATGATAAACATGTGTTCTGAGTCCCTAGTAAAGGCTACCGTTCGGACCATGGGTAAGTGGTTCTTGAGCTCAGGAAAGCTTGAACTTGACCAGATGTCTTTGCTTGTGGAGGCTTGTAAACTGGCTCTAATCACTCGTTGGGAAGGACAACATCATATTTATTTCTGGAAGTATCGGATCTCTGAAGCGCTTCTTAGTCTTGTTGTGGAGAACTTTCATAGTCAATCCTTGGATGGTTATGTATCTCTGGAAGAAGAAGTTTTAGTTGCTGAGAAGGTACTGAATGCCAATTTTTTACCTAGTCTGAGGTCATACGTTTGGGATATAATTGGATTCTTGGCAGCTCACTGTGAGGAAGAGTTTGATTCCATTTTGCGTGGAGATGAACTCTGCCTCAACTTTCTTGTCACATGTGCCTGCTTGTCCTTTTCGAGGTCGGTTCAGAAAGGCTATCAAATATGTCAAAATGATATTATCAGCGCCTCCCATAGCGAGTCAGCATCAAGAGCAGTGCTAATGATGATATGTTCTCCCTCCAAATACATATCATCGAGGGCCCGAGTTACCCTGTCATTTATCCTAGAAGAAGGTGGTGAGCAAAATTTGAATTCCCTTGTGAATTTTCTGAGTTATATTCCATCTTCAGGAGGTTACATACTGCCAAATATACTCCAAACTACCGTGTGTTTGGTGGGCTTTGCATGCTATTCATCGATACCTCAATATGCGAGTTTCATTTTAAGAAAGCAGGGTTTGGAGATACTTTTATCTTTCTGTAGCTGGTATCAAAGGAATTGGGAAAATATTGGAGCATCAAGTTTTGCTCCTTCTTCCCAGAGCATCACTGAAAAGAGGATATGCTGCTGGGTATGTACGGAAGACTGGGACAACAAAGATGCCTTTCTTCTATACGCTCTCTTGGCTTTGGCCGAGTTGGTAAATCATTCATTCTTTGGACAGAATCACGCTGAAGAACTTTCAATGAAGAGCGGAAATTTGAAAGATCGGTTATGCACCACACTTAAGGAAATCCGCGATGGAACATATGGCTCTGGTCCAAGGTGGTATGCTGCACACATCCTAAGCTATTTTGGATACTACGGCTTCGAACATAAGTTGGGGAAAAGGCTCATGTGTGCTTATGAAGATGAGGAATATAGTGATATGCGACTCCTTTTTGCTAGTGGAAATAGTGCGAGTGTAAACAAAGTTATTATCGCGGTCAGGTGTCCAATGCTACTGCCTCCCAAGGAAGGAGCTCACAGTAGCTCAACTATATCAACTGAGAAATCTCAGAGAACCGTTCAAGAAATCCGCATGTCTGCCAATGTGGATATTTTGGCACTTGTTAAATTATTGGAATTTGCTTACTCTGGTTATGTGGAAGTAGAAAGCACGACACTGAAAAAGCTGAAACCTTTGGCGAAACATTGTAAGGCAAAGGTTCTGCTGCAGATGCTCTGCAGAAGAAGACCCAAGTGGGGATCTTCAATACCCGAAATTGATATACCCCTTGCCCTCACTCCTAAACTCATCCACTTCTCGGATGTGATATTAGTACCTAAAGAAACAAACGTGGCTTGCTTCAACTGCCGTATGTGTTCCTTAACATCTCCTCATGCCCACTCTCACCGAGTTATACTGTCGTCAGGCTGTGAATACCTACGTGCCTTGTTTCGGTCCGGGATGCAGGAGAGCCATTTGGATAGACTAAACGTTCCTGTGAGCTGGCTGGGGTTAACAAAACTTGTGAGTTGGTTCTACTCTGATGAGTTGCCAAAGCCTCCATCGGGTTGCAAGTGGAACAACATGGACACTGAGGCAAAGCTGGATGAGCTTCAAGCTTATGTGGAGATATACTCGCTTTCTGAATGGTGGATTATGGAAGAACTTCAAAACGATTGCGCTCATGTGATTCTCTCTTGCTTGGAATCCGCTAGAGAGTTATCTATCAAAACAATCGAATTAGCTGCGAGTTTCTCGATGTGGAAACTGGTGGAAGCTGCTGCTAATCATGCAGCTCCTATTTATCATCAGCTTCGTGACTCAGGTGAGCTCGATGAGCTAGACGACGAGCTGGTAAACTTGATCCGAACCGCCGCTGTTCAGTTTTCTCAACAGGGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB

Protein Analysis

1002

Amino Acids

112.37

Weight (kDa)

6.2

Isoelectric Point (pI)

46.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_6 PF26522 130 - 243 3.1e-44 Plant ARM repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 737
AccBSI CCGCTC 1 cut(s) 1869
AccII CGCG 2 cut(s) 1914, 2099
AciI CCGC 7 cut(s) 1869, 1912, 2099, 2194, 2814, 2976, 2979
AclI AACGTT 1 cut(s) 2595
AclWI GGATC 4 cut(s) 360, 1064, 2371, 2962
AcoI YGGCCR 2 cut(s) 730, 1806
AcsI RAATTY 5 cut(s) 1480, 1486, 1498, 1873, 2240
AcuI CTGAAG 4 cut(s) 67, 1083, 1506, 1869
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 5 cut(s) 121, 586, 1158, 1753, 2439
AfeI AGCGCT 1 cut(s) 1068
AfiI CCNNNNNNNGG 9 cut(s) 680, 910, 1311, 1523, 2132, 2360, 2422, 2556, 2669
AflII CTTAAG 1 cut(s) 1901
AflIII ACRYGT 3 cut(s) 142, 888, 1289
AhdI GACNNNNNGTC 1 cut(s) 973
Alw21I GWGCWC 3 cut(s) 950, 2140, 2937
Alw26I GTCTC 1 cut(s) 133
AlwI GGATC 4 cut(s) 360, 1064, 2371, 2962
Ama87I CYCGRG 1 cut(s) 1437
Aor51HI AGCGCT 1 cut(s) 1068
AoxI GGCC 4 cut(s) 602, 730, 1434, 1806
ApaI GGGCCC 1 cut(s) 1438
ApoI RAATTY 5 cut(s) 1480, 1486, 1498, 1873, 2240
Asp700I GAANNNNTTC 3 cut(s) 558, 1068, 2769
AspLEI GCGC 3 cut(s) 1069, 1361, 2786
AspS9I GGNCC 5 cut(s) 924, 1434, 1435, 1934, 2559
AsuC2I CCSGG 2 cut(s) 235, 2563
AsuHPI GGTGA 5 cut(s) 41, 363, 1484, 2501, 2942
AsuII TTCGAA 1 cut(s) 1986
AsuNHI GCTAGC 1 cut(s) 838
AvaI CYCGRG 1 cut(s) 1437
AvaII GGWCC 3 cut(s) 924, 1934, 2559
BaeGI GKGCMC 1 cut(s) 1438
BalI TGGCCA 1 cut(s) 732
BanI GGYRCC 1 cut(s) 737
BanII GRGCYC 4 cut(s) 950, 1438, 2140, 2937
BauI CACGAG 2 cut(s) 183, 356
BbsI GAAGAC 2 cut(s) 1764, 2356
Bbv12I GWGCWC 3 cut(s) 950, 2140, 2937
BccI CCATC 6 cut(s) 562, 637, 1106, 1525, 1910, 2674
BceAI ACGGC 3 cut(s) 401, 1996, 2457
BcgI CGANNNNNNTGC 2 cut(s) 2831, 2865
BciVI GTATCC 1 cut(s) 1967
BcnI CCSGG 2 cut(s) 235, 2563
BcoDI GTCTC 1 cut(s) 133
BfmI CTRYAG 3 cut(s) 1654, 2330, 2341
BfoI RGCGCY 2 cut(s) 1070, 1362
BfrI CTTAAG 1 cut(s) 1901
BfuI GTATCC 1 cut(s) 1967
BglII AGATCT 1 cut(s) 525
Bme1390I CCNGG 2 cut(s) 235, 2563
Bme18I GGWCC 3 cut(s) 924, 1934, 2559
BmeRI GACNNNNNGTC 1 cut(s) 973
BmeT110I CYCGRG 1 cut(s) 1437
BmgT120I GGNCC 5 cut(s) 924, 1434, 1435, 1934, 2559
BmiI GGNNCC 2 cut(s) 739, 1436
BmrFI CCNGG 2 cut(s) 235, 2563
BmrI ACTGGG 1 cut(s) 1771
BmsI GCATC 6 cut(s) 1388, 1700, 1728, 1765, 2325, 2556
BmtI GCTAGC 1 cut(s) 842
BmuI ACTGGG 1 cut(s) 1771
BpiI GAAGAC 2 cut(s) 1764, 2356
BplI GAGNNNNNCTC 6 cut(s) 791, 823, 1251, 1283, 2723, 2755
Bpu10I CCTNAGC 2 cut(s) 949, 1961
Bpu14I TTCGAA 1 cut(s) 1986
BpuEI CTTGAG 1 cut(s) 964
BpuMI CCSGG 2 cut(s) 235, 2563
Bsa29I ATCGAT 1 cut(s) 1592
BsaAI YACGTR 1 cut(s) 2546
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 6 cut(s) 234, 733, 927, 1107, 1937, 2127
Bsc4I CCNNNNNNNGG 9 cut(s) 680, 910, 1311, 1523, 2132, 2360, 2422, 2556, 2669
Bse1I ACTGG 3 cut(s) 1005, 1766, 2877
BseCI ATCGAT 1 cut(s) 1592
BseDI CCNNGG 6 cut(s) 234, 733, 927, 1107, 1937, 2127
BseGI GGATG 7 cut(s) 493, 1117, 1956, 2412, 2431, 2571, 2716
BseLI CCNNNNNNNGG 9 cut(s) 680, 910, 1311, 1523, 2132, 2360, 2422, 2556, 2669
BseNI ACTGG 3 cut(s) 1005, 1766, 2877
BseRI GAGGAG 2 cut(s) 812, 2484
BseSI GKGCMC 1 cut(s) 1438
BseYI CCCAGC 2 cut(s) 1743, 2611
BsgI GTGCAG 1 cut(s) 1935
Bsh1236I CGCG 2 cut(s) 1914, 2099
BshFI GGCC 4 cut(s) 604, 732, 1436, 1808
BshNI GGYRCC 1 cut(s) 737
BshVI ATCGAT 1 cut(s) 1592
BsiHKAI GWGCWC 3 cut(s) 950, 2140, 2937
BsiHKCI CYCGRG 1 cut(s) 1437
BsiSI CCGG 2 cut(s) 234, 2562
BslFI GGGAC 2 cut(s) 886, 1778
BslI CCNNNNNNNGG 9 cut(s) 680, 910, 1311, 1523, 2132, 2360, 2422, 2556, 2669
BsmAI GTCTC 1 cut(s) 133
BsmFI GGGAC 2 cut(s) 886, 1778
BsmI GAATGC 2 cut(s) 337, 1168
BsnI GGCC 4 cut(s) 604, 732, 1436, 1808
BsoBI CYCGRG 1 cut(s) 1437
Bsp119I TTCGAA 1 cut(s) 1986
Bsp120I GGGCCC 1 cut(s) 1434
Bsp1286I GDGCHC 4 cut(s) 950, 1438, 2140, 2937
Bsp143I GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
Bsp19I CCATGG 2 cut(s) 733, 927
BspACI CCGC 7 cut(s) 1869, 1912, 2099, 2194, 2814, 2976, 2979
BspANI GGCC 4 cut(s) 604, 732, 1436, 1808
BspDI ATCGAT 1 cut(s) 1592
BspFNI CGCG 2 cut(s) 1914, 2099
BspLI GGNNCC 2 cut(s) 739, 1436
BspMAI CTGCAG 2 cut(s) 2334, 2345
BspOI GCTAGC 1 cut(s) 842
BspPI GGATC 4 cut(s) 360, 1064, 2371, 2962
BspQI GCTCTTC 1 cut(s) 1859
BspT104I TTCGAA 1 cut(s) 1986
BspT107I GGYRCC 1 cut(s) 737
BspTI CTTAAG 1 cut(s) 1901
BsrBI CCGCTC 1 cut(s) 1869
BsrI ACTGG 3 cut(s) 1005, 1766, 2877
BssECI CCNNGG 6 cut(s) 234, 733, 927, 1107, 1937, 2127
BssMI GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 2 cut(s) 183, 356
BssT1I CCWWGG 5 cut(s) 733, 927, 1107, 1937, 2127
Bst2BI CACGAG 2 cut(s) 183, 356
Bst4CI ACNGT 9 cut(s) 56, 499, 691, 919, 1229, 1561, 2144, 2182, 2523
Bst6I CTCTTC 3 cut(s) 51, 1230, 1859
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1901
BstBAI YACGTR 1 cut(s) 2546
BstBI TTCGAA 1 cut(s) 1986
BstC8I GCNNGC 6 cut(s) 840, 852, 1297, 1582, 2461, 2609
BstDSI CCRYGG 2 cut(s) 733, 927
BstEII GGTNACC 1 cut(s) 860
BstENI CCTNNNNNAGG 2 cut(s) 908, 1309
BstF5I GGATG 7 cut(s) 493, 1117, 1956, 2412, 2431, 2571, 2716
BstFNI CGCG 2 cut(s) 1914, 2099
BstH2I RGCGCY 2 cut(s) 1070, 1362
BstHHI GCGC 3 cut(s) 1069, 1361, 2786
BstKTI GATC 6 cut(s) 355, 528, 1059, 1885, 2366, 2970
BstMAI GTCTC 1 cut(s) 133
BstMBI GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
BstMWI GCNNNNNNNGC 9 cut(s) 428, 1385, 1581, 1799, 2335, 2469, 2713, 2894, 2941
BstNSI RCATGY 5 cut(s) 146, 892, 1293, 1584, 2200
BstPI GGTNACC 1 cut(s) 860
BstSCI CCNGG 2 cut(s) 233, 2561
BstSFI CTRYAG 3 cut(s) 1654, 2330, 2341
BstSLI GKGCMC 1 cut(s) 1438
BstUI CGCG 2 cut(s) 1914, 2099
BstV2I GAAGAC 2 cut(s) 1764, 2356
BstX2I RGATCY 4 cut(s) 352, 525, 1056, 2363
BstYI RGATCY 4 cut(s) 352, 525, 1056, 2363
Bsu15I ATCGAT 1 cut(s) 1592
BsuI GTATCC 1 cut(s) 1967
BsuRI GGCC 4 cut(s) 604, 732, 1436, 1808
BsuTUI ATCGAT 1 cut(s) 1592
BtgI CCRYGG 2 cut(s) 733, 927
BtgZI GCGATG 1 cut(s) 1929
BtsCI GGATG 7 cut(s) 493, 1117, 1956, 2412, 2431, 2571, 2716
BtsI GCAGTG 3 cut(s) 27, 279, 1395
BtsIMutI CAGTG 8 cut(s) 27, 279, 555, 1225, 1395, 1722, 2279, 2694
Cac8I GCNNGC 6 cut(s) 840, 852, 1297, 1582, 2461, 2609
CfoI GCGC 3 cut(s) 1069, 1361, 2786
Cfr13I GGNCC 5 cut(s) 924, 1434, 1435, 1934, 2559
ClaI ATCGAT 1 cut(s) 1592
CpoI CGGWCCG 1 cut(s) 2559
Csp6I GTAC 5 cut(s) 120, 585, 1157, 1752, 2438
CspI CGGWCCG 1 cut(s) 2559
CviQI GTAC 5 cut(s) 120, 585, 1157, 1752, 2438
DpnI GATC 6 cut(s) 354, 527, 1058, 1884, 2365, 2969
DpnII GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
DriI GACNNNNNGTC 1 cut(s) 973
EaeI YGGCCR 2 cut(s) 730, 1806
Eam1104I CTCTTC 3 cut(s) 51, 1230, 1859
Eam1105I GACNNNNNGTC 1 cut(s) 973
EarI CTCTTC 3 cut(s) 51, 1230, 1859
Ecl136II GAGCTC 3 cut(s) 948, 2138, 2935
Eco130I CCWWGG 5 cut(s) 733, 927, 1107, 1937, 2127
Eco24I GRGCYC 4 cut(s) 950, 1438, 2140, 2937
Eco47I GGWCC 3 cut(s) 924, 1934, 2559
Eco47III AGCGCT 1 cut(s) 1068
Eco53kI GAGCTC 3 cut(s) 948, 2138, 2935
Eco57I CTGAAG 4 cut(s) 67, 1083, 1506, 1869
Eco88I CYCGRG 1 cut(s) 1437
Eco91I GGTNACC 1 cut(s) 860
EcoICRI GAGCTC 3 cut(s) 948, 2138, 2935
EcoNI CCTNNNNNAGG 2 cut(s) 908, 1309
EcoO109I RGGNCCY 1 cut(s) 1434
EcoO65I GGTNACC 1 cut(s) 860
EcoRI GAATTC 1 cut(s) 1486
EcoT14I CCWWGG 5 cut(s) 733, 927, 1107, 1937, 2127
EcoT38I GRGCYC 4 cut(s) 950, 1438, 2140, 2937
ErhI CCWWGG 5 cut(s) 733, 927, 1107, 1937, 2127
FalI AAGNNNNNCTT 4 cut(s) 926, 958, 1056, 1088
FaqI GGGAC 2 cut(s) 886, 1778
FauNDI CATATG 1 cut(s) 1924
FokI GGATG 7 cut(s) 500, 1124, 1943, 2399, 2438, 2578, 2723
FriOI GRGCYC 4 cut(s) 950, 1438, 2140, 2937
GlaI GCGC 3 cut(s) 1068, 1360, 2785
GsaI CCCAGC 2 cut(s) 1747, 2615
HaeII RGCGCY 2 cut(s) 1070, 1362
HaeIII GGCC 4 cut(s) 604, 732, 1436, 1808
HapII CCGG 2 cut(s) 234, 2562
HhaI GCGC 3 cut(s) 1069, 1361, 2786
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 1067, 1359, 2784
HinP1I GCGC 3 cut(s) 1067, 1359, 2784
HincII GTYRAC 2 cut(s) 389, 2619
HindII GTYRAC 2 cut(s) 389, 2619
HindIII AAGCTT 2 cut(s) 956, 2721
HpaI GTTAAC 1 cut(s) 2619
HpaII CCGG 2 cut(s) 234, 2562
HphI GGTGA 5 cut(s) 41, 363, 1484, 2501, 2942
Hpy166II GTNNAC 7 cut(s) 120, 389, 442, 998, 2083, 2619, 2962
Hpy8I GTNNAC 7 cut(s) 120, 389, 442, 998, 2083, 2619, 2962
Hpy99I CGWCG 2 cut(s) 10, 2954
HpyAV CCTTC 7 cut(s) 336, 821, 1016, 1147, 1460, 1716, 2126
HpyCH4III ACNGT 9 cut(s) 56, 499, 691, 919, 1229, 1561, 2144, 2182, 2523
HpyCH4IV ACGT 5 cut(s) 444, 1194, 2454, 2545, 2595
HpyF10VI GCNNNNNNNGC 9 cut(s) 428, 1385, 1581, 1799, 2335, 2469, 2713, 2894, 2941
HpySE526I ACGT 5 cut(s) 444, 1194, 2454, 2545, 2595
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 1067, 1359, 2784
KspAI GTTAAC 1 cut(s) 2619
Kzo9I GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
LguI GCTCTTC 1 cut(s) 1859
LmnI GCTCC 4 cut(s) 1688, 1708, 2135, 2905
LweI GCATC 6 cut(s) 1388, 1700, 1728, 1765, 2325, 2556
MaeII ACGT 5 cut(s) 444, 1194, 2454, 2545, 2595
MaeIII GTNAC 5 cut(s) 860, 1285, 1441, 1529, 2921
MalI GATC 6 cut(s) 354, 527, 1058, 1884, 2365, 2969
MbiI CCGCTC 1 cut(s) 1869
MboI GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
MflI RGATCY 4 cut(s) 352, 525, 1056, 2363
MhlI GDGCHC 4 cut(s) 950, 1438, 2140, 2937
MlsI TGGCCA 1 cut(s) 732
MluNI TGGCCA 1 cut(s) 732
MlyI GAGTC 6 cut(s) 371, 809, 908, 1382, 2043, 2918
Mox20I TGGCCA 1 cut(s) 732
MroXI GAANNNNTTC 3 cut(s) 558, 1068, 2769
MscI TGGCCA 1 cut(s) 732
MseI TTAA 7 cut(s) 833, 1619, 1902, 2229, 2486, 2618, 3007
Msp20I TGGCCA 1 cut(s) 732
MspA1I CMGCKG 1 cut(s) 2981
MspCI CTTAAG 1 cut(s) 1901
MspI CCGG 2 cut(s) 234, 2562
MspR9I CCNGG 2 cut(s) 235, 2563
Mva1269I GAATGC 2 cut(s) 337, 1168
MvnI CGCG 2 cut(s) 1914, 2099
MwoI GCNNNNNNNGC 9 cut(s) 428, 1385, 1581, 1799, 2335, 2469, 2713, 2894, 2941
NciI CCSGG 2 cut(s) 235, 2563
NcoI CCATGG 2 cut(s) 733, 927
NdeI CATATG 1 cut(s) 1924
NdeII GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
NheI GCTAGC 1 cut(s) 838
NlaIV GGNNCC 2 cut(s) 739, 1436
NmeAIII GCCGAG 1 cut(s) 1834
NmuCI GTSAC 2 cut(s) 1285, 2921
NspI RCATGY 5 cut(s) 146, 892, 1293, 1584, 2200
NspV TTCGAA 1 cut(s) 1986
PaeI GCATGC 1 cut(s) 1584
PciI ACATGT 3 cut(s) 142, 888, 1289
PciSI GCTCTTC 1 cut(s) 1859
PctI GAATGC 2 cut(s) 337, 1168
PdmI GAANNNNTTC 3 cut(s) 558, 1068, 2769
PfeI GAWTC 7 cut(s) 215, 310, 1212, 1244, 1840, 2794, 2810
PfoI TCCNGGA 1 cut(s) 2561
PleI GAGTC 6 cut(s) 370, 808, 907, 1381, 2043, 2918
PpsI GAGTC 6 cut(s) 370, 808, 907, 1381, 2043, 2918
Ppu21I YACGTR 1 cut(s) 2546
PscI ACATGT 3 cut(s) 142, 888, 1289
Psp124BI GAGCTC 3 cut(s) 950, 2140, 2937
Psp1406I AACGTT 1 cut(s) 2595
PspEI GGTNACC 1 cut(s) 860
PspFI CCCAGC 2 cut(s) 1743, 2611
PspN4I GGNNCC 2 cut(s) 739, 1436
PspOMI GGGCCC 1 cut(s) 1434
PspPI GGNCC 5 cut(s) 924, 1434, 1435, 1934, 2559
PstI CTGCAG 2 cut(s) 2334, 2345
PsuI RGATCY 4 cut(s) 352, 525, 1056, 2363
RsaI GTAC 5 cut(s) 121, 586, 1158, 1753, 2439
RsaNI GTAC 5 cut(s) 120, 585, 1157, 1752, 2438
Rsr2I CGGWCCG 1 cut(s) 2559
RsrII CGGWCCG 1 cut(s) 2559
SacI GAGCTC 3 cut(s) 950, 2140, 2937
SapI GCTCTTC 1 cut(s) 1859
SaqAI TTAA 7 cut(s) 833, 1619, 1902, 2229, 2486, 2618, 3007
Sau3AI GATC 6 cut(s) 352, 525, 1056, 1882, 2363, 2967
Sau96I GGNCC 5 cut(s) 924, 1434, 1435, 1934, 2559
SchI GAGTC 6 cut(s) 371, 809, 908, 1382, 2043, 2918
ScrFI CCNGG 2 cut(s) 235, 2563
SduI GDGCHC 4 cut(s) 950, 1438, 2140, 2937
SfaNI GCATC 6 cut(s) 1388, 1700, 1728, 1765, 2325, 2556
SfcI CTRYAG 3 cut(s) 1654, 2330, 2341
SfuI TTCGAA 1 cut(s) 1986
SinI GGWCC 3 cut(s) 924, 1934, 2559
SmlI CTYRAG 2 cut(s) 943, 1901
SmoI CTYRAG 2 cut(s) 943, 1901
SphI GCATGC 1 cut(s) 1584
SsiI CCGC 7 cut(s) 1869, 1912, 2099, 2194, 2814, 2976, 2979
SspI AATATT 1 cut(s) 1684
SstI GAGCTC 3 cut(s) 950, 2140, 2937
StyD4I CCNGG 2 cut(s) 233, 2561
StyI CCWWGG 5 cut(s) 733, 927, 1107, 1937, 2127
TaaI ACNGT 9 cut(s) 56, 499, 691, 919, 1229, 1561, 2144, 2182, 2523
TaiI ACGT 5 cut(s) 447, 1197, 2457, 2548, 2598
TaqII GACCGA 1 cut(s) 2547
TatI WGTACW 2 cut(s) 119, 584
TauI GCSGC 1 cut(s) 2981
TfiI GAWTC 7 cut(s) 215, 310, 1212, 1244, 1840, 2794, 2810
Tru1I TTAA 7 cut(s) 833, 1619, 1902, 2229, 2486, 2618, 3007
Tru9I TTAA 7 cut(s) 833, 1619, 1902, 2229, 2486, 2618, 3007
TscAI CASTG 8 cut(s) 34, 279, 555, 1232, 1395, 1729, 2286, 2701
TseFI GTSAC 2 cut(s) 1285, 2921
Tsp45I GTSAC 2 cut(s) 1285, 2921
TspDTI ATGAA 8 cut(s) 330, 1085, 1278, 1578, 1603, 1815, 1877, 2037
TspGWI ACGGA 1 cut(s) 1769
TspRI CASTG 8 cut(s) 34, 279, 555, 1232, 1395, 1729, 2286, 2701
Vha464I CTTAAG 1 cut(s) 1901
VpaK11BI GGWCC 3 cut(s) 924, 1934, 2559
XagI CCTNNNNNAGG 2 cut(s) 908, 1309
XapI RAATTY 5 cut(s) 1480, 1486, 1498, 1873, 2240
XceI RCATGY 5 cut(s) 146, 892, 1293, 1584, 2200
XmnI GAANNNNTTC 3 cut(s) 558, 1068, 2769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.