Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007946

Physical Location & Seq

Genomic Coordinates Reverse (-)

20602767 .. 20608693

Gene Structure 5927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG204500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3036 bp

ATGGGACCTTCAAAACACGATCGGAGTATCATCAGTGGACAGACGTCCACGCGCCACCAGCGTCTCAACGACGCTCTTAACCTCGGCACCAGAGTGTATGGCGGTGATAAGGCAAGGAGATGGCAGTGTATGGATATTGCGATACAGAGGCATGTGGTCCATTCTATTGCTGCGTTTCTTGATTCTGTTTCTGGGGATAAGCTGCACCATCCACTTTTGAAGGCTTCCGCTGCCGATATCATTGCAGCATTAGTCTGGATACTTCAGTCTAACAAGGGAGCCATGTTGAGCACGGCAGCAAATGTGACAGTAAAATTAGTCAGCCTTTTACCCAAATCAATACTGCAGCTGGATGCTTTAGATCTTATTAATCCTTTGTCATCTTTGTTATCTGCCCATCAAACAGAAGTTTCTAGTGCTGCAGCATTGAGTCTTATCCTTACAAATCTCAGTATGAAGAATGCAAAAGAAGTTTGGGACATCCTTGAGAAAACAGAAAGTGTATCTCAAGTTATCAGTAACTTACGGTCTTTTTCAGAATGTATGATGCCATTTGAACATTTTCAACAGATGGCTTTACTTTTGAGTACAATACTATGGTGGTGGCCTCCATCTAGGTTTTCTGTTTGGAGTGATGCTAAACTGATGGAAGATTTAAATGATATGCTTATAAAGCGAGATGCTTATCACAAAGTTGCTGTTTTGAAATTGTATTCTGCCGTAGCTTTATGTGGTAATGGGGCCAAGAAAGTACTAGAAGGTGGAGAGGCACTTCTGGAACAGATGGTGCAATGCATGGACAGCTCATATCCTTATTCCGTTAGAATTGAAGCATTCAGGCTAGCACAGTGTTTAGCGATAAATGAACAAAAATGCTTGCAAATGATGAGTTTATCTTGCCAACCTATTATTAAAGCCATAATTTCTGGAATGTGTGACTGGAGCTCACATTCTAGAAAGGTCACCAATGACCAATTGTCTTTGCTAGTGGAAGCATGTCGCTTGGCTCTGATCACTCGTTGGGCAGGGGAGCATCACATTTACTTCTGGAAACAAGGAATTGATAAAATCCTTCTTGATCTTCTCCTTGAAAAATTTCACAACCAATCATATGAAGATTCCATGTCATTGGAAGAGCAGATAGTTATTGCTAAGGAGGGTCTCAATGCCAATTATTTACTTTTTTTGAGGAGTTATGTCTGGGATATTCTTGGATGGCTTGCAATACATTGTGGGGAGGATTTCAAACCTGAAACTGAGTTCCACTTTGACATCCTTATTGCATGTGCATGCTTGACCTTTGTTGAGGCAATTCAGAAATGGCATAAAATATATGAAAACGACATTGCTCGTACCTTCAGAAGTGAATCGGCAACGAGGGCAGTTCTGATGATGACTTATTCTCCCTGCAAATACATTGCGTCAAAGGCCAGATTCATATTGTCTGAAACACTGAAGCCAAAAGGCCTGGAGTATCTGAATATCTTACTGCGTTTTCTTAATAATCTGTCATCTGGGAATTTCGCGATACCAGATAAACTCCAAATTATCATTTATTTAATGGGATTTATATGCTATTCAGGTTTGGAAGAGTATCAAGTCTGGATTATCAAACAAAAAGGGGTAAAAACACTATTTTCTTTCGTGAAATGGTGCTTAAGTAATCATTTCCAAGTAGAAAGGTTGAGCTTTGCTCCCCATTTGCATAATACGTTTCATGGGAAAATTTGTTGTTCAAGTTCCAGAGAATGGGAAGGGAAAGACATTCTTTTGTTGTACAGTTTGTTGGGATTGGCTGAGTTGATAAAGCATTCTGGATGTGTAGGAGATAACCTAGACAGAATTGCCGGTAAGAATACATTGGCTCATATTGAAGCTGAACTAGTTAGTAAACTTCAGGACATCTGTAACGACAATTGTACCCCTGGGGTGCAATGGTATGCCGCATATGTTCTTAGTTATTTTGGGTTTTATGGTTTTCCGAGTAAGCTAATGAAAAGGATCGGTAAAGCAAATAATAATAAGGATTCTGCTGATTTACAATTCGTTCTCACAAATGGAGAGTGTTTCAGTGTTCATGGGGTGGTGCTTGCAATCCAATGTCCATCGCTACTGCCTCCTGAAGGGCTGCTTCCTAGTGAGGTAACATCCGATAATTCTTCAGTGACAGGCTCTATGGAGGTTTCTAAAGAGTTTCAGAAAGACATAAGATTATCTGCTCACGTCGATCACCAAGCATTGGTGATGTTGTTGGAGTATATCTACTTGGGATATGTACAAGCAGAAGAAGAACTTGCAAAAAAGTTGAGGACTCTTGCCAAACGTTGTAACTTACAGCCTCTGTTACAGATGCTTTGTAGAAAACGTCCAAAGTGGGGCATTGCTTTTCCTAGCCCTGATCTCAGTGCAGCTCTTGGTCCATCCGAACATCGTTTCTCGGATGTCATCTTAGAAGCGAAAGAAACAAAGCTTTTGGGCTGGACATGTGGTGTTTGCTCTTTATCAGTGCCTCACATGCATGTTCACAAGGTTGTATTGTCAGCAAGTTGTGATTATCTGAGGGCCTTGTTTGAGTCAGGAATGCAGGAGAGCAACTCACAAGCCATAAAGGTCTCAATCAGTTGGAAAGCAATGGTTAAACTAGTCAACTACTTCTATTCTGGTAACCTGCCAAAGCCTCCTTCCGGATGTATATGGAATAACATGGACACTGAAGAAAAGTTAGATGAGGTACAGTCATATGTAGAGCTTTTTTGGCTCTCTGAGTTCTGGATCATGGAAGATGTCCAGGAAGCATGCTCGGATGCCATCATATCATGTCTTGGTTCTGCAAGAGAGTTGGCTATTAAAATACTACAAATTGCTGCAAATTTATCTCTCTGGAACTTGGCCGAGGTTGCAGCGACTTATATGGCCCCTTTATATCGCCAGTTATGTGATTCTGGTGAACTTGAAACACTTGATGACATGCTGGCTGATATGGTTCGGGTAGCGTCTGTTCGATTCTCCCAACAGGGTGGTGATCAGTTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB

Protein Analysis

1011

Amino Acids

113.78

Weight (kDa)

6.26

Isoelectric Point (pI)

44.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_6	PF26522	134 - 244	6.7e-44	Plant ARM repeat
BTB	PF00651	838 - 908	1.5e-09	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007946)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04390
fragaria_vesca	FvH4_3g15860
malus_domestica	MD05G1219300.v1.1
prunus_persica	Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1
pyrus_communis	pycom05g20050 pycom05g20060
rosa_chinensis	RchiOBHm_Chr5g0026671
rosa_laevigata	RLG00000032945
rosa_multiflora	Rmu_co8501061.1_g000001 Rmu_sc0004490.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052790
rosa_rugosa	Rorug05G0094700 Rorug05G0094700
rosa_samantha	Rh5AG188300 Rh5BG184600 Rh5CG204500 Rh5DG186900
rosa_wichuraiana	Rw5G017040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	671
AatII	GACGTC	1 cut(s)	47
Acc36I	ACCTGC	1 cut(s)	2676
AccB1I	GGYRCC	1 cut(s)	86
AccB7I	CCANNNNNTGG	2 cut(s)	1749, 2239
AccII	CGCG	2 cut(s)	52, 1526
AccIII	TCCGGA	1 cut(s)	2684
AciI	CCGC	3 cut(s)	102, 228, 1944
AclI	AACGTT	1 cut(s)	2323
AclWI	GGATC	2 cut(s)	2009, 2780
AcoI	YGGCCR	1 cut(s)	2889
AcsI	RAATTY	4 cut(s)	1094, 1519, 1725, 2869
AcuI	CTGAAG	7 cut(s)	248, 1342, 1475, 1880, 2142, 2145, 2733
AcyI	GRCGYC	1 cut(s)	44
AfaI	GTAC	7 cut(s)	589, 753, 1354, 1778, 1921, 2277, 2733
AfiI	CCNNNNNNNGG	5 cut(s)	1749, 2123, 2239, 2375, 2684
AflII	CTTAAG	1 cut(s)	1657
AflIII	ACRYGT	1 cut(s)	2483
AhdI	GACNNNNNGTC	1 cut(s)	976
AhlI	ACTAGT	2 cut(s)	1882, 2641
AjiI	CACGTC	1 cut(s)	2224
AjnI	CCWGG	3 cut(s)	1467, 1924, 2787
AjuI	GAANNNNNNNTTGG	2 cut(s)	2665, 2697
AleI	CACNNNNGTG	1 cut(s)	92
Alw21I	GWGCWC	2 cut(s)	293, 947
Alw26I	GTCTC	3 cut(s)	68, 1166, 2617
AlwI	GGATC	2 cut(s)	2009, 2780
AlwNI	CAGNNNCTG	1 cut(s)	2341
Aor13HI	TCCGGA	1 cut(s)	2684
AoxI	GGCC	7 cut(s)	605, 741, 1428, 1465, 2562, 2889, 2913
ApoI	RAATTY	4 cut(s)	1094, 1519, 1725, 2869
AseI	ATTAAT	1 cut(s)	369
Asp700I	GAANNNNTTC	2 cut(s)	561, 1095
AspLEI	GCGC	1 cut(s)	54
AspS9I	GGNCC	6 cut(s)	5, 157, 741, 2417, 2562, 2914
AsuHPI	GGTGA	6 cut(s)	116, 955, 2222, 2254, 2957, 3032
AsuNHI	GCTAGC	1 cut(s)	841
AvaII	GGWCC	3 cut(s)	5, 157, 2417
BaeI	ACNNNNGTAYC	4 cut(s)	251, 284, 1903, 1936
BanI	GGYRCC	1 cut(s)	86
BanII	GRGCYC	1 cut(s)	947
Bbv12I	GWGCWC	2 cut(s)	293, 947
BceAI	ACGGC	2 cut(s)	309, 704
BcgI	CGANNNNNNTGC	2 cut(s)	224, 258
BciT130I	CCWGG	3 cut(s)	1469, 1926, 2789
BciVI	GTATCC	1 cut(s)	252
BclI	TGATCA	2 cut(s)	1011, 3022
BcoDI	GTCTC	3 cut(s)	68, 1166, 2617
BcuI	ACTAGT	2 cut(s)	1882, 2641
BfmI	CTRYAG	2 cut(s)	344, 420
BfrI	CTTAAG	1 cut(s)	1657
BfuAI	ACCTGC	1 cut(s)	2676
BfuI	GTATCC	1 cut(s)	252
BglII	AGATCT	1 cut(s)	361
BmcAI	AGTACT	1 cut(s)	753
Bme1390I	CCNGG	3 cut(s)	1469, 1926, 2789
Bme18I	GGWCC	3 cut(s)	5, 157, 2417
BmeRI	GACNNNNNGTC	1 cut(s)	976
BmgBI	CACGTC	1 cut(s)	2224
BmgT120I	GGNCC	6 cut(s)	5, 157, 741, 2417, 2562, 2914
BmiI	GGNNCC	5 cut(s)	6, 88, 280, 742, 2916
BmrFI	CCNGG	3 cut(s)	1469, 1926, 2789
BmsI	GCATC	7 cut(s)	343, 537, 625, 670, 1042, 2340, 2794
BmtI	GCTAGC	1 cut(s)	845
BoxI	GACNNNNGTC	1 cut(s)	43
BplI	GAGNNNNNCTC	4 cut(s)	1678, 1710, 2579, 2611
BpmI	CTGGAG	2 cut(s)	961, 1490
Bpu10I	CCTNAGC	1 cut(s)	1152
BpuEI	CTTGAG	2 cut(s)	492, 506
BsaBI	GATNNNNATC	1 cut(s)	684
BsaHI	GRCGYC	1 cut(s)	44
BsaI	GGTCTC	2 cut(s)	1166, 2617
BsaJI	CCNNGG	4 cut(s)	82, 1924, 1925, 2892
BsaWI	WCCGGW	1 cut(s)	2684
BsaXI	ACNNNNNCTCC	2 cut(s)	1387, 1417
Bsc4I	CCNNNNNNNGG	5 cut(s)	1749, 2123, 2239, 2375, 2684
Bse118I	RCCGGY	1 cut(s)	1847
Bse1I	ACTGG	2 cut(s)	944, 2929
Bse3DI	GCAATG	7 cut(s)	240, 797, 1344, 1416, 1940, 2379, 2637
Bse8I	GATNNNNATC	1 cut(s)	684
BseAI	TCCGGA	1 cut(s)	2684
BseBI	CCWGG	3 cut(s)	1469, 1926, 2789
BseDI	CCNNGG	4 cut(s)	82, 1924, 1925, 2892
BseJI	GATNNNNATC	1 cut(s)	684
BseLI	CCNNNNNNNGG	5 cut(s)	1749, 2123, 2239, 2375, 2684
BseMI	GCAATG	7 cut(s)	240, 797, 1344, 1416, 1940, 2379, 2637
BseMII	CTCAG	6 cut(s)	463, 1248, 1788, 2416, 2549, 2754
BseNI	ACTGG	2 cut(s)	944, 2929
BseRI	GAGGAG	1 cut(s)	1204
BsgI	GTGCAG	2 cut(s)	188, 2427
Bsh1236I	CGCG	2 cut(s)	52, 1526
Bsh1285I	CGRYCG	1 cut(s)	22
BshFI	GGCC	7 cut(s)	607, 743, 1430, 1467, 2564, 2891, 2915
BshNI	GGYRCC	1 cut(s)	86
BsiEI	CGRYCG	1 cut(s)	22
BsiHKAI	GWGCWC	2 cut(s)	293, 947
BsiSI	CCGG	2 cut(s)	1848, 2685
BslFI	GGGAC	2 cut(s)	18, 491
BslI	CCNNNNNNNGG	5 cut(s)	1749, 2123, 2239, 2375, 2684
BsmAI	GTCTC	3 cut(s)	68, 1166, 2617
BsmBI	CGTCTC	1 cut(s)	68
BsmFI	GGGAC	2 cut(s)	18, 491
BsmI	GAATGC	4 cut(s)	466, 833, 1810, 2586
BsnI	GGCC	7 cut(s)	607, 743, 1430, 1467, 2564, 2891, 2915
Bso31I	GGTCTC	2 cut(s)	1166, 2617
Bsp1286I	GDGCHC	2 cut(s)	293, 947
Bsp13I	TCCGGA	1 cut(s)	2684
Bsp1407I	TGTACA	2 cut(s)	1776, 2275
Bsp143I	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
Bsp68I	TCGCGA	1 cut(s)	1526
BspACI	CCGC	3 cut(s)	102, 228, 1944
BspANI	GGCC	7 cut(s)	607, 743, 1430, 1467, 2564, 2891, 2915
BspCNI	CTCAG	6 cut(s)	462, 1249, 1789, 2415, 2550, 2755
BspEI	TCCGGA	1 cut(s)	2684
BspFNI	CGCG	2 cut(s)	52, 1526
BspLI	GGNNCC	5 cut(s)	6, 88, 280, 742, 2916
BspMAI	CTGCAG	2 cut(s)	348, 424
BspMI	ACCTGC	1 cut(s)	2676
BspOI	GCTAGC	1 cut(s)	845
BspPI	GGATC	2 cut(s)	2009, 2780
BspQI	GCTCTTC	1 cut(s)	1128
BspT107I	GGYRCC	1 cut(s)	86
BspTI	CTTAAG	1 cut(s)	1657
BspTNI	GGTCTC	2 cut(s)	1166, 2617
BsrDI	GCAATG	7 cut(s)	240, 797, 1344, 1416, 1940, 2379, 2637
BsrFI	RCCGGY	1 cut(s)	1847
BsrGI	TGTACA	2 cut(s)	1776, 2275
BsrI	ACTGG	2 cut(s)	944, 2929
BssAI	RCCGGY	1 cut(s)	1847
BssECI	CCNNGG	4 cut(s)	82, 1924, 1925, 2892
BssMI	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
BssNI	GRCGYC	1 cut(s)	44
Bst2UI	CCWGG	3 cut(s)	1469, 1926, 2789
Bst4CI	ACNGT	5 cut(s)	310, 528, 849, 1781, 2736
Bst6I	CTCTTC	2 cut(s)	1128, 1584
BstACI	GRCGYC	1 cut(s)	44
BstAFI	CTTAAG	1 cut(s)	1657
BstAUI	TGTACA	2 cut(s)	1776, 2275
BstC8I	GCNNGC	7 cut(s)	843, 878, 1221, 1291, 2091, 2797, 2973
BstDEI	CTNAG	9 cut(s)	449, 1152, 1257, 1797, 1955, 2402, 2449, 2558, 2763
BstEII	GGTNACC	2 cut(s)	961, 2663
BstENI	CCTNNNNNAGG	1 cut(s)	2121
BstFNI	CGCG	2 cut(s)	52, 1526
BstHHI	GCGC	1 cut(s)	54
BstKTI	GATC	9 cut(s)	22, 364, 1014, 1081, 2004, 2230, 2401, 2775, 3025
BstMAI	GTCTC	3 cut(s)	68, 1166, 2617
BstMBI	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
BstMCI	CGRYCG	1 cut(s)	22
BstMWI	GCNNNNNNNGC	9 cut(s)	58, 230, 673, 801, 1379, 1427, 2515, 2755, 2897
BstNI	CCWGG	3 cut(s)	1469, 1926, 2789
BstNSI	RCATGY	9 cut(s)	155, 999, 1287, 1293, 2487, 2518, 2522, 2799, 2971
BstPAI	GACNNNNGTC	1 cut(s)	43
BstPI	GGTNACC	2 cut(s)	961, 2663
BstSCI	CCNGG	3 cut(s)	1467, 1924, 2787
BstSFI	CTRYAG	2 cut(s)	344, 420
BstUI	CGCG	2 cut(s)	52, 1526
BstX2I	RGATCY	1 cut(s)	361
BstXI	CCANNNNNNTGG	2 cut(s)	1129, 3017
BstYI	RGATCY	1 cut(s)	361
BsuI	GTATCC	1 cut(s)	252
BsuRI	GGCC	7 cut(s)	607, 743, 1430, 1467, 2564, 2891, 2915
BtgZI	GCGATG	1 cut(s)	2091
BtrI	CACGTC	1 cut(s)	2224
BtsI	GCAGTG	1 cut(s)	131
BtsIMutI	CAGTG	9 cut(s)	40, 131, 854, 1451, 2077, 2169, 2410, 2511, 2709
BtuMI	TCGCGA	1 cut(s)	1526
BveI	ACCTGC	1 cut(s)	2676
Cac8I	GCNNGC	7 cut(s)	843, 878, 1221, 1291, 2091, 2797, 2973
CaiI	CAGNNNCTG	1 cut(s)	2341
CfoI	GCGC	1 cut(s)	54
Cfr10I	RCCGGY	1 cut(s)	1847
Cfr13I	GGNCC	6 cut(s)	5, 157, 741, 2417, 2562, 2914
CseI	GACGC	4 cut(s)	50, 80, 1410, 2982
Csp6I	GTAC	7 cut(s)	588, 752, 1353, 1777, 1920, 2276, 2732
CviQI	GTAC	7 cut(s)	588, 752, 1353, 1777, 1920, 2276, 2732
DdeI	CTNAG	9 cut(s)	449, 1152, 1257, 1797, 1955, 2402, 2449, 2558, 2763
DpnI	GATC	9 cut(s)	21, 363, 1013, 1080, 2003, 2229, 2400, 2774, 3024
DpnII	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
DraI	TTTAAA	1 cut(s)	657
DriI	GACNNNNNGTC	1 cut(s)	976
EaeI	YGGCCR	1 cut(s)	2889
Eam1104I	CTCTTC	2 cut(s)	1128, 1584
Eam1105I	GACNNNNNGTC	1 cut(s)	976
EarI	CTCTTC	2 cut(s)	1128, 1584
Ecl136II	GAGCTC	1 cut(s)	945
Eco147I	AGGCCT	1 cut(s)	1467
Eco24I	GRGCYC	1 cut(s)	947
Eco31I	GGTCTC	2 cut(s)	1166, 2617
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	3 cut(s)	5, 157, 2417
Eco53kI	GAGCTC	1 cut(s)	945
Eco57I	CTGAAG	7 cut(s)	248, 1342, 1475, 1880, 2142, 2145, 2733
Eco91I	GGTNACC	2 cut(s)	961, 2663
EcoICRI	GAGCTC	1 cut(s)	945
EcoNI	CCTNNNNNAGG	1 cut(s)	2121
EcoO109I	RGGNCCY	2 cut(s)	5, 2562
EcoO65I	GGTNACC	2 cut(s)	961, 2663
EcoRII	CCWGG	3 cut(s)	1467, 1924, 2787
EcoRV	GATATC	1 cut(s)	238
EcoT22I	ATGCAT	2 cut(s)	797, 2520
EcoT38I	GRGCYC	1 cut(s)	947
Esp3I	CGTCTC	1 cut(s)	68
FalI	AAGNNNNNCTT	6 cut(s)	1752, 1784, 2115, 2147, 2277, 2309
FaqI	GGGAC	2 cut(s)	18, 491
FauNDI	CATATG	3 cut(s)	1111, 1948, 2740
FbaI	TGATCA	2 cut(s)	1011, 3022
FriOI	GRGCYC	1 cut(s)	947
GlaI	GCGC	1 cut(s)	53
GsuI	CTGGAG	2 cut(s)	961, 1490
HaeIII	GGCC	7 cut(s)	607, 743, 1430, 1467, 2564, 2891, 2915
HapII	CCGG	2 cut(s)	1848, 2685
HgaI	GACGC	4 cut(s)	50, 80, 1410, 2982
HhaI	GCGC	1 cut(s)	54
Hin1I	GRCGYC	1 cut(s)	44
Hin6I	GCGC	1 cut(s)	52
HinP1I	GCGC	1 cut(s)	52
HincII	GTYRAC	1 cut(s)	2647
HindII	GTYRAC	1 cut(s)	2647
HindIII	AAGCTT	1 cut(s)	2468
HpaII	CCGG	2 cut(s)	1848, 2685
HphI	GGTGA	6 cut(s)	116, 955, 2222, 2254, 2957, 3032
Hpy166II	GTNNAC	6 cut(s)	38, 48, 1892, 2524, 2647, 2948
Hpy8I	GTNNAC	6 cut(s)	38, 48, 1892, 2524, 2647, 2948
Hpy99I	CGWCG	2 cut(s)	74, 2228
HpyAV	CCTTC	8 cut(s)	18, 214, 752, 1082, 1366, 1748, 2117, 2691
HpyCH4III	ACNGT	5 cut(s)	310, 528, 849, 1781, 2736
HpyCH4IV	ACGT	5 cut(s)	44, 1712, 2223, 2323, 2365
HpyF10VI	GCNNNNNNNGC	9 cut(s)	58, 230, 673, 801, 1379, 1427, 2515, 2755, 2897
HpyF3I	CTNAG	9 cut(s)	449, 1152, 1257, 1797, 1955, 2402, 2449, 2558, 2763
HpySE526I	ACGT	5 cut(s)	44, 1712, 2223, 2323, 2365
Hsp92I	GRCGYC	1 cut(s)	44
HspAI	GCGC	1 cut(s)	52
Kpn2I	TCCGGA	1 cut(s)	2684
Ksp22I	TGATCA	2 cut(s)	1011, 3022
Kzo9I	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
LguI	GCTCTTC	1 cut(s)	1128
LmnI	GCTCC	4 cut(s)	278, 942, 1030, 1699
LweI	GCATC	7 cut(s)	343, 537, 625, 670, 1042, 2340, 2794
MaeII	ACGT	5 cut(s)	44, 1712, 2223, 2323, 2365
MalI	GATC	9 cut(s)	21, 363, 1013, 1080, 2003, 2229, 2400, 2774, 3024
MboI	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
MfeI	CAATTG	2 cut(s)	974, 1915
MflI	RGATCY	1 cut(s)	361
MhlI	GDGCHC	2 cut(s)	293, 947
MlyI	GAGTC	3 cut(s)	439, 2305, 2582
MmeI	TCCRAC	2 cut(s)	2232, 2603
Mph1103I	ATGCAT	2 cut(s)	797, 2520
MroI	TCCGGA	1 cut(s)	2684
MroXI	GAANNNNTTC	2 cut(s)	561, 1095
MseI	TTAA	9 cut(s)	78, 369, 656, 912, 1500, 1559, 1658, 2637, 2847
MslI	CAYNNNNRTG	3 cut(s)	92, 1288, 2517
MspA1I	CMGCKG	2 cut(s)	230, 349
MspCI	CTTAAG	1 cut(s)	1657
MspI	CCGG	2 cut(s)	1848, 2685
MspR9I	CCNGG	3 cut(s)	1469, 1926, 2789
MunI	CAATTG	2 cut(s)	974, 1915
Mva1269I	GAATGC	4 cut(s)	466, 833, 1810, 2586
MvaI	CCWGG	3 cut(s)	1469, 1926, 2789
MvnI	CGCG	2 cut(s)	52, 1526
MwoI	GCNNNNNNNGC	9 cut(s)	58, 230, 673, 801, 1379, 1427, 2515, 2755, 2897
NdeI	CATATG	3 cut(s)	1111, 1948, 2740
NdeII	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
NheI	GCTAGC	1 cut(s)	841
NlaIV	GGNNCC	5 cut(s)	6, 88, 280, 742, 2916
NmeAIII	GCCGAG	2 cut(s)	63, 2917
NmuCI	GTSAC	4 cut(s)	304, 935, 961, 2164
NruI	TCGCGA	1 cut(s)	1526
NsiI	ATGCAT	2 cut(s)	797, 2520
NspI	RCATGY	9 cut(s)	155, 999, 1287, 1293, 2487, 2518, 2522, 2799, 2971
OliI	CACNNNNGTG	1 cut(s)	92
PaeI	GCATGC	2 cut(s)	1293, 2799
PasI	CCCWGGG	1 cut(s)	1925
PceI	AGGCCT	1 cut(s)	1467
PciI	ACATGT	1 cut(s)	2483
PciSI	GCTCTTC	1 cut(s)	1128
PctI	GAATGC	4 cut(s)	466, 833, 1810, 2586
PdmI	GAANNNNTTC	2 cut(s)	561, 1095
PfeI	GAWTC	7 cut(s)	182, 1118, 1367, 1434, 2027, 2939, 3003
PflMI	CCANNNNNTGG	2 cut(s)	1749, 2239
PfoI	TCCNGGA	1 cut(s)	2787
Ple19I	CGATCG	1 cut(s)	22
PleI	GAGTC	3 cut(s)	438, 2305, 2581
PpsI	GAGTC	3 cut(s)	438, 2305, 2581
PpuMI	RGGWCCY	1 cut(s)	5
PscI	ACATGT	1 cut(s)	2483
PshAI	GACNNNNGTC	1 cut(s)	43
PshBI	ATTAAT	1 cut(s)	369
PsiI	TTATAA	1 cut(s)	671
Psp124BI	GAGCTC	1 cut(s)	947
Psp1406I	AACGTT	1 cut(s)	2323
Psp5II	RGGWCCY	1 cut(s)	5
Psp6I	CCWGG	3 cut(s)	1467, 1924, 2787
PspEI	GGTNACC	2 cut(s)	961, 2663
PspGI	CCWGG	3 cut(s)	1467, 1924, 2787
PspN4I	GGNNCC	5 cut(s)	6, 88, 280, 742, 2916
PspPI	GGNCC	6 cut(s)	5, 157, 741, 2417, 2562, 2914
PspPPI	RGGWCCY	1 cut(s)	5
PsrI	GAACNNNNNNTAC	2 cut(s)	2982, 3014
PstI	CTGCAG	2 cut(s)	348, 424
PstNI	CAGNNNCTG	1 cut(s)	2341
PsuI	RGATCY	1 cut(s)	361
PvuI	CGATCG	1 cut(s)	22
PvuII	CAGCTG	1 cut(s)	349
RruI	TCGCGA	1 cut(s)	1526
RsaI	GTAC	7 cut(s)	589, 753, 1354, 1778, 1921, 2277, 2733
RsaNI	GTAC	7 cut(s)	588, 752, 1353, 1777, 1920, 2276, 2732
RseI	CAYNNNNRTG	3 cut(s)	92, 1288, 2517
SacI	GAGCTC	1 cut(s)	947
SapI	GCTCTTC	1 cut(s)	1128
SaqAI	TTAA	9 cut(s)	78, 369, 656, 912, 1500, 1559, 1658, 2637, 2847
Sau3AI	GATC	9 cut(s)	19, 361, 1011, 1078, 2001, 2227, 2398, 2772, 3022
Sau96I	GGNCC	6 cut(s)	5, 157, 741, 2417, 2562, 2914
ScaI	AGTACT	1 cut(s)	753
SchI	GAGTC	3 cut(s)	439, 2305, 2582
ScrFI	CCNGG	3 cut(s)	1469, 1926, 2789
SduI	GDGCHC	2 cut(s)	293, 947
SfaNI	GCATC	7 cut(s)	343, 537, 625, 670, 1042, 2340, 2794
SfcI	CTRYAG	2 cut(s)	344, 420
SinI	GGWCC	3 cut(s)	5, 157, 2417
SmiI	ATTTAAAT	1 cut(s)	657
SmiMI	CAYNNNNRTG	3 cut(s)	92, 1288, 2517
SmlI	CTYRAG	3 cut(s)	485, 507, 1657
SmoI	CTYRAG	3 cut(s)	485, 507, 1657
SpeI	ACTAGT	2 cut(s)	1882, 2641
SphI	GCATGC	2 cut(s)	1293, 2799
SseBI	AGGCCT	1 cut(s)	1467
SsiI	CCGC	3 cut(s)	102, 228, 1944
SstI	GAGCTC	1 cut(s)	947
StuI	AGGCCT	1 cut(s)	1467
StyD4I	CCNGG	3 cut(s)	1467, 1924, 2787
SwaI	ATTTAAAT	1 cut(s)	657
TaaI	ACNGT	5 cut(s)	310, 528, 849, 1781, 2736
TaiI	ACGT	5 cut(s)	47, 1715, 2226, 2326, 2368
TaqI	TCGA	2 cut(s)	2226, 3001
TatI	WGTACW	4 cut(s)	587, 751, 1776, 2275
TauI	GCSGC	1 cut(s)	1946
TfiI	GAWTC	7 cut(s)	182, 1118, 1367, 1434, 2027, 2939, 3003
Tru1I	TTAA	9 cut(s)	78, 369, 656, 912, 1500, 1559, 1658, 2637, 2847
Tru9I	TTAA	9 cut(s)	78, 369, 656, 912, 1500, 1559, 1658, 2637, 2847
TscAI	CASTG	9 cut(s)	40, 131, 854, 1458, 2077, 2169, 2410, 2511, 2716
TseFI	GTSAC	4 cut(s)	304, 935, 961, 2164
Tsp45I	GTSAC	4 cut(s)	304, 935, 961, 2164
TspDTI	ATGAA	8 cut(s)	470, 879, 1128, 1350, 1426, 1706, 2009, 2066
TspGWI	ACGGA	1 cut(s)	808
TspRI	CASTG	9 cut(s)	40, 131, 854, 1458, 2077, 2169, 2410, 2511, 2716
Van91I	CCANNNNNTGG	2 cut(s)	1749, 2239
Vha464I	CTTAAG	1 cut(s)	1657
VpaK11BI	GGWCC	3 cut(s)	5, 157, 2417
VspI	ATTAAT	1 cut(s)	369
XagI	CCTNNNNNAGG	1 cut(s)	2121
XapI	RAATTY	4 cut(s)	1094, 1519, 1725, 2869
XbaI	TCTAGA	1 cut(s)	953
XceI	RCATGY	9 cut(s)	155, 999, 1287, 1293, 2487, 2518, 2522, 2799, 2971
XmnI	GAANNNNTTC	2 cut(s)	561, 1095
ZraI	GACGTC	1 cut(s)	45
ZrmI	AGTACT	1 cut(s)	753
Zsp2I	ATGCAT	2 cut(s)	797, 2520

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.