pycom05g20050

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0007946
Physical Location & Seq
Forward (+)
22953515 .. 22956947
3433 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g20050.1

Sequence Viewer

Length: 2343 bp
ATGAGACCTTCAATTTCAAAGCAGGGAACTGCAGACAATAGTAATAAGGGCCTCACCGGTCACACCTGCACCCTCCATCAGCGTCTCAATCATGCTCTCAACCTCGGCACCAGAATTAATCACGACAAGGTGAAAAAATGGCAGTGTGTCGATATGGAGATACAAAGACATGTGCTCCAGTCAATAGCTTCATTTCTCGATTCTGTTTCTGGGGATACGCGGCACCATCCACTTGTGAAGGCTTCAGTTGCTGACATTGTTGGCGCATTGGTTTGGATGCTTCAATCTGACAATGGATCCATGTTGAGGATGGCAGCGGATGTGACAGTAAAATTAGTCAGTATTTTCCCCAAATCAGTACTGCAGCTTTATGTGTTAGAGCTTGTTAATCCTTTGTCATCTTTGTTATCTTCGCACCAAACAGAAGTTGCTATTTTATCTGCCACAGCATTGAATCTTATTCTTTCAAACCTCAGTACCAAGAGTGAGAAAGAAGTTTGGGAAATTCTTAGGAAAACAGAAAGTGTATCTCAAGTTGTCAGTAACTTACGGTTTTTTCCTGGATGTACAAAGACATTGAAATATTTCCAACAGATGGCTCTACTTTTGAGTACAATACTATGGTGGTGGCCGTCATCCAGGTTTTCTGTTTGGAGTGATACTAAACTGATGAATGGCTTAAATGAAATGTTAAAGCTAGATATTGATGAAAAAGTTGCAGTTTTGAAGTTGTATTCTTCTTTAGCTTTATGTGGTATTGGGGCCAAAAAAGTATTGGAAAGTGGAGAGGTCCTCGGACAGATGTTGCAATGCATGGACAACTTTCATCCACACTCAATTCGCATTGAAGGATTCAAGTTAGCCCAGTGCCTAGTGATAAATGAAGAAATATGCGTACAAATGATGAGCTTAGGTTGCAAACCTATCATCAAAGTCATAATTTCTGGAATGAGTGAGTGGAACTCACATTCTAGAAAGGTCAGCAATGACCAGATGTCTTTGCTAGAGGAGGCATGTCGTTTGGCTCTGATAACTCGTTGGGAAGGGGAGCATCACATTTATATGTGGAAACAAGGGATTGACAAAATCCTTCTTGATCTTCTCCTTGAAAATTTTCACAACCAACCATACAAATGTTCCATGTCATTGGATGAGCAAATGGTTATTGCCAAGGAGGGTCTCAATGCCAATTATCTTCTTGTTCTGAGGAGTTATATCTGGGATATTCTCGGATGGCTTGCAATACATTGTGGGGAGGATTTCAACCCTGAAAGGGAAATCTATATTAACATCCTCATGACAGGTGCATGTTTGACCTTTGTTGATGCAATTCAAAAGTGGCATAAAATATATGAAAATGATATTGCTGGTGCCTTCAGACGTGAATCGGCTACAAGGGCAGTTTCAATGATGATTTATTCACCCTGCAAATACATTGCGTCCAAGACCAGATTCATATTGTCCGAAATACTAGGACAAGATGGAGGGGAGTATTTGAAAACCTTACTGCGTTTCCTAAATAATTTGTCATCTGGGAATTATTTCGGAGTTCCAGATAAACTCCAAATTATTGTTTATTTAATGGGATTAGCATGCTATTCAGCTTTGCCACAGTACCAAGTCTGGGGTAAAAAATGTGTAAAAACATTCTTGGCTTTTATCAGGTGGTGCTTAACTAATAATTTCCATTTAGAAAGATCAAGCTTTGCTCCTCATCTGCATAATCCATTCCATGAGAGGATTTGCTGTTGGGTTTCTGCAGAAGACTGGGAAGGCAAAGACATTCTTTTGTTTTACAGTATGTGGGGGCTGGCTGAGTGGATACAGCATTGGGGATGCTTAGGAAATAACCTAGACAAAACTTCTGGTGAGATGAGAAATATAGAAGCTCAACTTGTTAGTGAACTTCAGGATATCTGTAACAACAGTTGTACTCCTGGAGTGCAATGGTATGCTGCTTATATTCTTAGTTATTTTGGATATTATGGTTTTCCAAATAAACTTGGGAAAAAAATTGGCAAGGCACTTACTGAGAAGGATTATGCTGATATACAACTCATTCTTGCAAATGGAGAGTGTTTGAGGGTCCATGGTGTTGTGCTTGCAACTCAATGCCCATCATTGTTGCCTTCTGAACTGCTGCTTCCCAGCGAGGTAACATGTGAGGAATCTTCGGTGACATGCTCTACGGAAATTTGTAAAAAGTTCTGTAAAGACATAAGGTTATCTGCTCATGTTGATCGACCAAGCGCTGGTTGTGTTGTTGGAATATATCTACTTGGGATATCTACAAACAGGACAAGAACTTGTAAAGAAGTTGAGGACTCTTGCCAAACGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB

Protein Analysis

781

Amino Acids

88.22

Weight (kDa)

7.05

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_6 PF26522 138 - 251 2.5e-45 Plant ARM repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 74
Acc36I ACCTGC 1 cut(s) 74
AccB1I GGYRCC 3 cut(s) 107, 222, 1370
AccB7I CCANNNNNTGG 2 cut(s) 595, 2252
AccII CGCG 1 cut(s) 220
AciI CCGC 2 cut(s) 220, 317
AclI AACGTT 1 cut(s) 2336
AclWI GGATC 2 cut(s) 291, 304
AcoI YGGCCR 1 cut(s) 629
AcsI RAATTY 3 cut(s) 504, 1111, 2193
AcuI CTGAAG 3 cut(s) 228, 1360, 1892
AfaI GTAC 7 cut(s) 360, 478, 568, 613, 897, 1616, 1933
AfeI AGCGCT 1 cut(s) 2251
AfiI CCNNNNNNNGG 5 cut(s) 306, 595, 1273, 1624, 2252
AflIII ACRYGT 2 cut(s) 169, 2159
AgeI ACCGGT 1 cut(s) 56
AhdI GACNNNNNGTC 1 cut(s) 994
AjiI CACGTC 1 cut(s) 1382
AjnI CCWGG 3 cut(s) 559, 638, 1936
AjuI GAANNNNNNNTTGG 2 cut(s) 1436, 1468
AluBI AGCT 9 cut(s) 188, 367, 382, 697, 746, 909, 1604, 1704, 1889
AluI AGCT 9 cut(s) 188, 367, 382, 697, 746, 909, 1604, 1704, 1889
Alw21I GWGCWC 1 cut(s) 177
Alw26I GTCTC 2 cut(s) 89, 1184
AlwI GGATC 2 cut(s) 291, 304
AlwNI CAGNNNCTG 1 cut(s) 251
Aor51HI AGCGCT 1 cut(s) 2251
AoxI GGCC 3 cut(s) 49, 629, 762
ApeKI GCWGC 4 cut(s) 314, 364, 1955, 2140
ApoI RAATTY 3 cut(s) 504, 1111, 2193
AseI ATTAAT 1 cut(s) 117
AsiGI ACCGGT 1 cut(s) 56
Asp700I GAANNNNTTC 3 cut(s) 584, 1113, 1541
AspLEI GCGC 2 cut(s) 266, 2252
AspS9I GGNCC 4 cut(s) 49, 762, 790, 2086
AsuHPI GGTGA 5 cut(s) 46, 142, 1413, 1880, 2188
AvaII GGWCC 2 cut(s) 790, 2086
BaeI ACNNNNGTAYC 2 cut(s) 460, 493
BamHI GGATCC 1 cut(s) 296
BanI GGYRCC 3 cut(s) 107, 222, 1370
BbsI GAAGAC 1 cut(s) 1770
Bbv12I GWGCWC 1 cut(s) 177
BbvI GCAGC 4 cut(s) 326, 376, 1942, 2127
BccI CCATC 7 cut(s) 84, 234, 304, 589, 1227, 1475, 2125
BceAI ACGGC 1 cut(s) 616
BciT130I CCWGG 3 cut(s) 561, 640, 1938
BciVI GTATCC 2 cut(s) 208, 1815
BcoDI GTCTC 2 cut(s) 89, 1184
BfaI CTAG 6 cut(s) 698, 872, 972, 1004, 1472, 1853
BfmI CTRYAG 3 cut(s) 30, 362, 1758
BfoI RGCGCY 1 cut(s) 2253
BfuAI ACCTGC 1 cut(s) 74
BfuI GTATCC 2 cut(s) 208, 1815
BisI GCNGC 5 cut(s) 221, 315, 365, 1956, 2141
BlsI GCNGC 5 cut(s) 222, 316, 366, 1957, 2142
BmcAI AGTACT 1 cut(s) 360
Bme1390I CCNGG 3 cut(s) 561, 640, 1938
Bme18I GGWCC 2 cut(s) 790, 2086
BmeRI GACNNNNNGTC 1 cut(s) 994
BmgBI CACGTC 1 cut(s) 1382
BmgT120I GGNCC 4 cut(s) 49, 762, 790, 2086
BmiI GGNNCC 6 cut(s) 109, 224, 298, 763, 1372, 2087
BmrFI CCNGG 3 cut(s) 561, 640, 1938
BmrI ACTGGG 2 cut(s) 859, 1777
BmsI GCATC 4 cut(s) 267, 1060, 1315, 1826
BmuI ACTGGG 2 cut(s) 859, 1777
BpiI GAAGAC 1 cut(s) 1770
BplI GAGNNNNNCTC 4 cut(s) 777, 809, 947, 979
BpmI CTGGAG 2 cut(s) 161, 1959
Bpu10I CCTNAGC 2 cut(s) 910, 1840
BpuEI CTTGAG 1 cut(s) 516
BsaI GGTCTC 1 cut(s) 1184
BsaJI CCNNGG 4 cut(s) 103, 793, 1170, 2089
BsaWI WCCGGW 1 cut(s) 56
BsaXI ACNNNNNCTCC 2 cut(s) 159, 189
Bsc4I CCNNNNNNNGG 5 cut(s) 306, 595, 1273, 1624, 2252
Bse118I RCCGGY 1 cut(s) 56
Bse1I ACTGG 3 cut(s) 178, 865, 1772
Bse3DI GCAATG 4 cut(s) 815, 991, 1434, 1952
BseBI CCWGG 3 cut(s) 561, 640, 1938
BseDI CCNNGG 4 cut(s) 103, 793, 1170, 2089
BseLI CCNNNNNNNGG 5 cut(s) 306, 595, 1273, 1624, 2252
BseMI GCAATG 4 cut(s) 815, 991, 1434, 1952
BseMII CTCAG 4 cut(s) 487, 1196, 1806, 2022
BseNI ACTGG 3 cut(s) 178, 865, 1772
BseRI GAGGAG 3 cut(s) 1022, 1222, 1701
BseXI GCAGC 4 cut(s) 326, 376, 1942, 2127
BseYI CCCAGC 1 cut(s) 2147
BsgI GTGCAG 1 cut(s) 52
Bsh1236I CGCG 1 cut(s) 220
BshFI GGCC 3 cut(s) 51, 631, 764
BshNI GGYRCC 3 cut(s) 107, 222, 1370
BshTI ACCGGT 1 cut(s) 56
BsiHKAI GWGCWC 1 cut(s) 177
BsiSI CCGG 1 cut(s) 57
BslI CCNNNNNNNGG 5 cut(s) 306, 595, 1273, 1624, 2252
BsmAI GTCTC 2 cut(s) 89, 1184
BsmBI CGTCTC 1 cut(s) 89
BsnI GGCC 3 cut(s) 51, 631, 764
Bso31I GGTCTC 1 cut(s) 1184
Bsp1286I GDGCHC 1 cut(s) 177
Bsp1407I TGTACA 1 cut(s) 566
Bsp143I GATC 4 cut(s) 296, 1096, 1697, 2239
Bsp19I CCATGG 1 cut(s) 2089
BspACI CCGC 2 cut(s) 220, 317
BspANI GGCC 3 cut(s) 51, 631, 764
BspCNI CTCAG 4 cut(s) 486, 1197, 1807, 2023
BspFNI CGCG 1 cut(s) 220
BspHI TCATGA 1 cut(s) 1296
BspLI GGNNCC 6 cut(s) 109, 224, 298, 763, 1372, 2087
BspMAI CTGCAG 3 cut(s) 34, 366, 1762
BspMI ACCTGC 1 cut(s) 74
BspPI GGATC 2 cut(s) 291, 304
BspT107I GGYRCC 3 cut(s) 107, 222, 1370
BspTNI GGTCTC 1 cut(s) 1184
BsrDI GCAATG 4 cut(s) 815, 991, 1434, 1952
BsrFI RCCGGY 1 cut(s) 56
BsrGI TGTACA 1 cut(s) 566
BsrI ACTGG 3 cut(s) 178, 865, 1772
BssAI RCCGGY 1 cut(s) 56
BssECI CCNNGG 4 cut(s) 103, 793, 1170, 2089
BssMI GATC 4 cut(s) 296, 1096, 1697, 2239
BssT1I CCWWGG 2 cut(s) 1170, 2089
Bst2UI CCWGG 3 cut(s) 561, 640, 1938
Bst4CI ACNGT 5 cut(s) 328, 552, 1614, 1799, 1928
BstAUI TGTACA 1 cut(s) 566
BstC8I GCNNGC 4 cut(s) 1239, 1594, 1812, 2103
BstDEI CTNAG 8 cut(s) 473, 509, 910, 1205, 1815, 1840, 1967, 2031
BstDSI CCRYGG 1 cut(s) 2089
BstFNI CGCG 1 cut(s) 220
BstH2I RGCGCY 1 cut(s) 2253
BstHHI GCGC 2 cut(s) 266, 2252
BstKTI GATC 4 cut(s) 299, 1099, 1700, 2242
BstMAI GTCTC 2 cut(s) 89, 1184
BstMBI GATC 4 cut(s) 296, 1096, 1697, 2239
BstMWI GCNNNNNNNGC 3 cut(s) 248, 915, 1397
BstNI CCWGG 3 cut(s) 561, 640, 1938
BstNSI RCATGY 6 cut(s) 173, 1017, 1311, 1596, 2163, 2184
BstSCI CCNGG 3 cut(s) 559, 638, 1936
BstSFI CTRYAG 3 cut(s) 30, 362, 1758
BstUI CGCG 1 cut(s) 220
BstV1I GCAGC 4 cut(s) 326, 376, 1942, 2127
BstV2I GAAGAC 1 cut(s) 1770
BstX2I RGATCY 1 cut(s) 296
BstXI CCANNNNNNTGG 1 cut(s) 1147
BstYI RGATCY 1 cut(s) 296
BsuI GTATCC 2 cut(s) 208, 1815
BsuRI GGCC 3 cut(s) 51, 631, 764
BtgI CCRYGG 1 cut(s) 2089
BtrI CACGTC 1 cut(s) 1382
BtsI GCAGTG 1 cut(s) 149
BtsIMutI CAGTG 2 cut(s) 149, 872
BveI ACCTGC 1 cut(s) 74
Cac8I GCNNGC 4 cut(s) 1239, 1594, 1812, 2103
CaiI CAGNNNCTG 1 cut(s) 251
CciI TCATGA 1 cut(s) 1296
CfoI GCGC 2 cut(s) 266, 2252
Cfr10I RCCGGY 1 cut(s) 56
Cfr13I GGNCC 4 cut(s) 49, 762, 790, 2086
CseI GACGC 2 cut(s) 71, 1428
Csp6I GTAC 7 cut(s) 359, 477, 567, 612, 896, 1615, 1932
CspAI ACCGGT 1 cut(s) 56
CviQI GTAC 7 cut(s) 359, 477, 567, 612, 896, 1615, 1932
DdeI CTNAG 8 cut(s) 473, 509, 910, 1205, 1815, 1840, 1967, 2031
DpnI GATC 4 cut(s) 298, 1098, 1699, 2241
DpnII GATC 4 cut(s) 296, 1096, 1697, 2239
DriI GACNNNNNGTC 1 cut(s) 994
EaeI YGGCCR 1 cut(s) 629
Eam1105I GACNNNNNGTC 1 cut(s) 994
Eco130I CCWWGG 2 cut(s) 1170, 2089
Eco31I GGTCTC 1 cut(s) 1184
Eco32I GATATC 2 cut(s) 1915, 2286
Eco47I GGWCC 2 cut(s) 790, 2086
Eco47III AGCGCT 1 cut(s) 2251
Eco57I CTGAAG 3 cut(s) 228, 1360, 1892
EcoO109I RGGNCCY 2 cut(s) 49, 790
EcoRII CCWGG 3 cut(s) 559, 638, 1936
EcoRV GATATC 2 cut(s) 1915, 2286
EcoT14I CCWWGG 2 cut(s) 1170, 2089
EcoT22I ATGCAT 1 cut(s) 815
ErhI CCWWGG 2 cut(s) 1170, 2089
Esp3I CGTCTC 1 cut(s) 89
FalI AAGNNNNNCTT 4 cut(s) 1770, 1802, 1878, 1910
Fnu4HI GCNGC 5 cut(s) 221, 315, 365, 1956, 2141
Fsp4HI GCNGC 5 cut(s) 221, 315, 365, 1956, 2141
FspBI CTAG 6 cut(s) 698, 872, 972, 1004, 1472, 1853
GlaI GCGC 2 cut(s) 265, 2251
GluI GCNGC 5 cut(s) 221, 315, 365, 1956, 2141
GsaI CCCAGC 1 cut(s) 2151
GsuI CTGGAG 2 cut(s) 161, 1959
HaeII RGCGCY 1 cut(s) 2253
HaeIII GGCC 3 cut(s) 51, 631, 764
HapII CCGG 1 cut(s) 57
HgaI GACGC 2 cut(s) 71, 1428
HhaI GCGC 2 cut(s) 266, 2252
Hin6I GCGC 2 cut(s) 264, 2250
HinP1I GCGC 2 cut(s) 264, 2250
HindIII AAGCTT 1 cut(s) 1702
HinfI GANTC 7 cut(s) 200, 454, 852, 1385, 1452, 2168, 2324
HpaII CCGG 1 cut(s) 57
HphI GGTGA 5 cut(s) 46, 142, 1413, 1880, 2188
Hpy166II GTNNAC 1 cut(s) 1904
Hpy188I TCNGA 9 cut(s) 289, 797, 1029, 1206, 1232, 1379, 1465, 1547, 2134
Hpy188III TCNNGA 8 cut(s) 122, 197, 945, 972, 1094, 1297, 1553, 1910
Hpy8I GTNNAC 1 cut(s) 1904
HpyAV CCTTC 9 cut(s) 18, 232, 842, 1037, 1100, 1384, 1766, 2029, 2139
HpyCH4III ACNGT 5 cut(s) 328, 552, 1614, 1799, 1928
HpyCH4IV ACGT 2 cut(s) 1381, 2336
HpyF10VI GCNNNNNNNGC 3 cut(s) 248, 915, 1397
HpyF3I CTNAG 8 cut(s) 473, 509, 910, 1205, 1815, 1840, 1967, 2031
HpySE526I ACGT 2 cut(s) 1381, 2336
HspAI GCGC 2 cut(s) 264, 2250
Kzo9I GATC 4 cut(s) 296, 1096, 1697, 2239
LmnI GCTCC 3 cut(s) 180, 1048, 1714
Lsp1109I GCAGC 4 cut(s) 326, 376, 1942, 2127
LweI GCATC 4 cut(s) 267, 1060, 1315, 1826
MaeI CTAG 6 cut(s) 698, 872, 972, 1004, 1472, 1853
MaeII ACGT 2 cut(s) 1381, 2336
MaeIII GTNAC 6 cut(s) 59, 322, 542, 1919, 2155, 2176
MalI GATC 4 cut(s) 298, 1098, 1699, 2241
MboI GATC 4 cut(s) 296, 1096, 1697, 2239
MboII GAAGA 7 cut(s) 402, 729, 896, 1091, 1187, 1775, 2163
MflI RGATCY 1 cut(s) 296
MhlI GDGCHC 1 cut(s) 177
MlyI GAGTC 1 cut(s) 2318
MmeI TCCRAC 2 cut(s) 613, 2245
Mph1103I ATGCAT 1 cut(s) 815
MroXI GAANNNNTTC 3 cut(s) 584, 1113, 1541
MseI TTAA 7 cut(s) 117, 387, 680, 692, 1287, 1580, 1673
MslI CAYNNNNRTG 3 cut(s) 1061, 1132, 1295
MspA1I CMGCKG 1 cut(s) 317
MspI CCGG 1 cut(s) 57
MspR9I CCNGG 3 cut(s) 561, 640, 1938
MvaI CCWGG 3 cut(s) 561, 640, 1938
MvnI CGCG 1 cut(s) 220
MwoI GCNNNNNNNGC 3 cut(s) 248, 915, 1397
NcoI CCATGG 1 cut(s) 2089
NdeII GATC 4 cut(s) 296, 1096, 1697, 2239
NlaIV GGNNCC 6 cut(s) 109, 224, 298, 763, 1372, 2087
NmeAIII GCCGAG 1 cut(s) 84
NmuCI GTSAC 3 cut(s) 59, 322, 2176
NsiI ATGCAT 1 cut(s) 815
NspI RCATGY 6 cut(s) 173, 1017, 1311, 1596, 2163, 2184
PaeI GCATGC 1 cut(s) 1596
PagI TCATGA 1 cut(s) 1296
PaqCI CACCTGC 1 cut(s) 74
PciI ACATGT 2 cut(s) 169, 2159
PdmI GAANNNNTTC 3 cut(s) 584, 1113, 1541
PfeI GAWTC 6 cut(s) 200, 454, 852, 1385, 1452, 2168
PflMI CCANNNNNTGG 2 cut(s) 595, 2252
PfoI TCCNGGA 2 cut(s) 559, 1936
PinAI ACCGGT 1 cut(s) 56
PkrI GCNGC 5 cut(s) 222, 316, 366, 1957, 2142
PleI GAGTC 1 cut(s) 2318
PpsI GAGTC 1 cut(s) 2318
PpuMI RGGWCCY 1 cut(s) 790
PscI ACATGT 2 cut(s) 169, 2159
PshBI ATTAAT 1 cut(s) 117
Psp1406I AACGTT 1 cut(s) 2336
Psp5II RGGWCCY 1 cut(s) 790
Psp6I CCWGG 3 cut(s) 559, 638, 1936
PspFI CCCAGC 1 cut(s) 2147
PspGI CCWGG 3 cut(s) 559, 638, 1936
PspN4I GGNNCC 6 cut(s) 109, 224, 298, 763, 1372, 2087
PspPI GGNCC 4 cut(s) 49, 762, 790, 2086
PspPPI RGGWCCY 1 cut(s) 790
PstI CTGCAG 3 cut(s) 34, 366, 1762
PstNI CAGNNNCTG 1 cut(s) 251
PsuI RGATCY 1 cut(s) 296
RsaI GTAC 7 cut(s) 360, 478, 568, 613, 897, 1616, 1933
RsaNI GTAC 7 cut(s) 359, 477, 567, 612, 896, 1615, 1932
RseI CAYNNNNRTG 3 cut(s) 1061, 1132, 1295
SaqAI TTAA 7 cut(s) 117, 387, 680, 692, 1287, 1580, 1673
SatI GCNGC 5 cut(s) 221, 315, 365, 1956, 2141
Sau3AI GATC 4 cut(s) 296, 1096, 1697, 2239
Sau96I GGNCC 4 cut(s) 49, 762, 790, 2086
ScaI AGTACT 1 cut(s) 360
SchI GAGTC 1 cut(s) 2318
ScrFI CCNGG 3 cut(s) 561, 640, 1938
SduI GDGCHC 1 cut(s) 177
SfaNI GCATC 4 cut(s) 267, 1060, 1315, 1826
SfcI CTRYAG 3 cut(s) 30, 362, 1758
SinI GGWCC 2 cut(s) 790, 2086
SmiMI CAYNNNNRTG 3 cut(s) 1061, 1132, 1295
SmlI CTYRAG 1 cut(s) 531
SmoI CTYRAG 1 cut(s) 531
SphI GCATGC 1 cut(s) 1596
SsiI CCGC 2 cut(s) 220, 317
SspI AATATT 1 cut(s) 584
SspMI CTAG 6 cut(s) 698, 872, 972, 1004, 1472, 1853
StyD4I CCNGG 3 cut(s) 559, 638, 1936
StyI CCWWGG 2 cut(s) 1170, 2089
TaaI ACNGT 5 cut(s) 328, 552, 1614, 1799, 1928
TaiI ACGT 2 cut(s) 1384, 2339
TaqI TCGA 3 cut(s) 150, 198, 2242
TatI WGTACW 4 cut(s) 358, 566, 611, 1931
TauI GCSGC 1 cut(s) 223
TfiI GAWTC 6 cut(s) 200, 454, 852, 1385, 1452, 2168
Tru1I TTAA 7 cut(s) 117, 387, 680, 692, 1287, 1580, 1673
Tru9I TTAA 7 cut(s) 117, 387, 680, 692, 1287, 1580, 1673
TscAI CASTG 2 cut(s) 149, 872
TseFI GTSAC 3 cut(s) 59, 322, 2176
TseI GCWGC 4 cut(s) 314, 364, 1955, 2140
Tsp45I GTSAC 3 cut(s) 59, 322, 2176
TspDTI ATGAA 8 cut(s) 180, 686, 699, 723, 815, 897, 1368, 1444
TspGWI ACGGA 1 cut(s) 2204
TspRI CASTG 2 cut(s) 149, 872
Van91I CCANNNNNTGG 2 cut(s) 595, 2252
VpaK11BI GGWCC 2 cut(s) 790, 2086
VspI ATTAAT 1 cut(s) 117
XapI RAATTY 3 cut(s) 504, 1111, 2193
XbaI TCTAGA 1 cut(s) 971
XceI RCATGY 6 cut(s) 173, 1017, 1311, 1596, 2163, 2184
XcmI CCANNNNNNNNNTGG 2 cut(s) 307, 772
XmnI GAANNNNTTC 3 cut(s) 584, 1113, 1541
XspI CTAG 6 cut(s) 698, 872, 972, 1004, 1472, 1853
ZrmI AGTACT 1 cut(s) 360
Zsp2I ATGCAT 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.